Running 'testthat.R' [197s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(occCite)
  > 
  > test_check("occCite")
  [1] "NOTE: 1 BIEN dataset(s) for Protea cynaroides is/are missing citation data. Key(s) missing citations are: 280. Source(s) are identified as: MO."
  	
   OccCite query occurred on: 24 November, 2020
  	
   User query type: User-supplied list of taxa.
  	
   Sources for taxonomic rectification: NCBI
   	
  	
   Taxonomic cleaning results: 	
  
           Input Name        Best Match Taxonomic Databases w/ Matches
  1 Protea cynaroides Protea cynaroides                           NCBI
  	
   Sources for occurrence data: gbif, bien
   	
              Species Occurrences Sources
  1 Protea cynaroides        1293      17
  	
   GBIF dataset DOIs: 	
  
              Species GBIF Access Date           GBIF DOI
  1 Protea cynaroides       2020-11-23 10.15468/dl.2449qy
  	
   OccCite query occurred on: 24 November, 2020
  	
   User query type: User-supplied list of taxa.
  	
   Sources for taxonomic rectification: NCBI
   	
  	
   Taxonomic cleaning results: 	
  
           Input Name        Best Match Taxonomic Databases w/ Matches
  1 Protea cynaroides Protea cynaroides                           NCBI
  	
   Sources for occurrence data: gbif
   	
              Species Occurrences Sources
  1 Protea cynaroides        1145      12
  	
   GBIF dataset DOIs: 	
  
              Species GBIF Access Date           GBIF DOI
  1 Protea cynaroides       2020-11-23 10.15468/dl.2449qy
  	
   OccCite query occurred on: 24 November, 2020
  	
   User query type: User-supplied list of taxa.
  	
   Sources for taxonomic rectification: NCBI
   	
  	
   Taxonomic cleaning results: 	
  
           Input Name        Best Match Taxonomic Databases w/ Matches
  1 Protea cynaroides Protea cynaroides                           NCBI
  	
   Sources for occurrence data: bien
   	
              Species Occurrences Sources
  1 Protea cynaroides         148       5
  [ FAIL 1 | WARN 0 | SKIP 17 | PASS 179 ]
  
  ══ Skipped tests ═══════════════════════════════════════════════════════════════
  • On CRAN (16)
  • internet connection established (1)
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error (test-taxonRectification.R:48:3): taxonRectification performs as expected ──
  Error: Service Unavailable (HTTP 503)
  Backtrace:
      ▆
   1. ├─testthat::expect_warning(...) at test-taxonRectification.R:48:2
   2. │ └─testthat:::quasi_capture(enquo(object), label, capture_warnings)
   3. │   ├─testthat .capture(...)
   4. │   │ └─base::withCallingHandlers(...)
   5. │   └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
   6. └─occCite::taxonRectification(...)
   7.   └─taxize::gnr_resolve(sci = taxName, data_source_ids = sourceIDs)
   8.     └─tmp$raise_for_status()
  
  [ FAIL 1 | WARN 0 | SKIP 17 | PASS 179 ]
  Error: Test failures
  Execution halted