Error(s) in re-building vignettes:
  ...
--- re-building ‘QUICKhddplot.Rnw’ using knitr

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:stats':

    IQR, mad, sd, var, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, basename, cbind, colnames, dirname, do.call,
    duplicated, eval, evalq, get, grep, grepl, intersect,
    is.unsorted, lapply, mapply, match, mget, order, paste,
    pmax, pmax.int, pmin, pmin.int, rank, rbind, rownames,
    sapply, setdiff, sort, table, tapply, union, unique,
    unsplit, which.max, which.min

Welcome to Bioconductor

    Vignettes contain introductory material; view with
    'browseVignettes()'. To cite Bioconductor, see
    'citation("Biobase")', and for packages
    'citation("pkgname")'.

Warning in lda.default(x, grouping, ...) : variables are collinear
Warning in lda.default(x, grouping, ...) : variables are collinear
Warning in lda.default(x, grouping, ...) : variables are collinear
Warning in lda.default(x, grouping, ...) : variables are collinear
Warning in lda.default(x, grouping, ...) : variables are collinear
Warning in lda.default(x, grouping, ...) : variables are collinear
Warning in lda.default(x, grouping, ...) : variables are collinear
Warning in lda.default(x, grouping, ...) : variables are collinear
Warning in lda.default(x, grouping, ...) : variables are collinear
Warning in lda.default(x, grouping, ...) : variables are collinear
Warning in lda.default(x, grouping, ...) : variables are collinear
Warning in lda.default(x, grouping, ...) : variables are collinear
Warning in lda.default(x, grouping, ...) : variables are collinear
Warning in lda.default(x, grouping, ...) : variables are collinear
Warning in lda.default(x, grouping, ...) : variables are collinear
Warning in lda.default(x, grouping, ...) : variables are collinear
Warning in lda.default(x, grouping, ...) : variables are collinear
Warning in lda.default(x, grouping, ...) : variables are collinear
Warning in lda.default(x, grouping, ...) : variables are collinear
Warning in lda.default(x, grouping, ...) : variables are collinear
Warning in lda.default(x, grouping, ...) : variables are collinear
Warning in lda.default(x, grouping, ...) : variables are collinear
Warning in lda.default(x, grouping, ...) : variables are collinear
Warning in lda.default(x, grouping, ...) : variables are collinear
Error: processing vignette ‘QUICKhddplot.Rnw’ failed with diagnostics:
Running ‘texi2dvi’ on ‘QUICKhddplot.tex’ failed.
LaTeX errors:
! You can't use `macro parameter character #' in horizontal mode.
l.102 attach(golubInfo)#
                        # Identify allB samples for that are BM:f or BM:m or...

? 
! Emergency stop.
l.102 attach(golubInfo)#
                        # Identify allB samples for that are BM:f or BM:m or...
End of file on the terminal!

!  ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘QUICKhddplot.Rnw’

SUMMARY: processing the following file failed:
  ‘QUICKhddplot.Rnw’

Error: Vignette re-building failed.
Execution halted