Running 'testthat-active_snw.R'
  Running 'testthat-clustering.R'
  Running 'testthat-comparison.R'
  Running 'testthat-core.R'
Running the tests in 'tests/testthat-core.R' failed.
Complete output:
  > ##################################################
  > ## Project: pathfindR
  > ## Script purpose: Main "test_check" script for
  > ## "core_functions" functions
  > ## Date: Jan 12, 2020
  > ## Author: Ege Ulgen
  > ##################################################
  > 
  > library(testthat)
  > library(pathfindR)
  Loading required package: pathfindR.data
  ##############################################################################
                          Welcome to pathfindR!
  
  Please cite the article below if you use pathfindR in published reseach:
  
  Ulgen E, Ozisik O, Sezerman OU. 2019. pathfindR: An R Package for Comprehensive
  Identification of Enriched Pathways in Omics Data Through Active Subnetworks.
  Front. Genet. doi:10.3389/fgene.2019.00858
  
  ##############################################################################
  > 
  > test_check("pathfindR", filter = "core_functions")
  ══ Skipped tests ═══════════════════════════════════════════════════════════════
  • On CRAN (5)
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error (test-core_functions.R:87:3): Expect warning with empty result from `run_pathfindR()` ──
  Error in `pathfindR::filterActiveSnws(active_snw_path = snws_file, sig_genes_vec = input_for_search$GENE, 
      score_quan_thr = score_quan_thr, sig_gene_thr = sig_gene_thr)`: The active subnetwork file does not exist! Check the `active_snw_path` argument
  Backtrace:
      █
   1. ├─testthat::expect_warning(...) test-core_functions.R:87:2
   2. │ └─testthat:::quasi_capture(enquo(object), label, capture_warnings)
   3. │   ├─testthat:::.capture(...)
   4. │   │ └─base::withCallingHandlers(...)
   5. │   └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
   6. └─pathfindR::run_pathfindR(...)
   7.   └─pathfindR::active_snw_search(...)
   8.     └─pathfindR::filterActiveSnws(...)
  
  [ FAIL 1 | WARN 0 | SKIP 5 | PASS 45 ]
  Error: Test failures
  Execution halted