Error(s) in re-building vignettes:
--- re-building ‘A200-CRM.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
Loading required package: Rcpp
Warning: There were 1 divergent transitions after warmup. See
http://mc-stan.org/misc/warnings.html#divergent-transitions-after-warmup
to find out why this is a problem and how to eliminate them.
Warning: Examine the pairs() plot to diagnose sampling problems

Quitting from lines 202-212 (A200-CRM.Rmd) 
Error: processing vignette 'A200-CRM.Rmd' failed with diagnostics:
polygon edge not found
--- failed re-building ‘A200-CRM.Rmd’

--- re-building ‘A210-CRM-visualisation.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
Loading required package: Rcpp

Attaching package: 'dplyr'

The following objects are masked from 'package:stats':

    filter, lag

The following objects are masked from 'package:base':

    intersect, setdiff, setequal, union

Quitting from lines 79-86 (A210-CRM-visualisation.Rmd) 
Error: processing vignette 'A210-CRM-visualisation.Rmd' failed with diagnostics:
polygon edge not found
--- failed re-building ‘A210-CRM-visualisation.Rmd’

--- re-building ‘A220-CRM-pathways.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
Loading required package: Rcpp

Attaching package: 'dplyr'

The following objects are masked from 'package:stats':

    filter, lag

The following objects are masked from 'package:base':

    intersect, setdiff, setequal, union

--- finished re-building ‘A220-CRM-pathways.Rmd’

--- re-building ‘A250-LevyCaseStudy.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.

Attaching package: 'dplyr'

The following objects are masked from 'package:stats':

    filter, lag

The following objects are masked from 'package:base':

    intersect, setdiff, setequal, union

Warning: There were 1991 divergent transitions after warmup. See
http://mc-stan.org/misc/warnings.html#divergent-transitions-after-warmup
to find out why this is a problem and how to eliminate them.
Warning: Examine the pairs() plot to diagnose sampling problems

Warning: Bulk Effective Samples Size (ESS) is too low, indicating posterior means and medians may be unreliable.
Running the chains for more iterations may help. See
http://mc-stan.org/misc/warnings.html#bulk-ess
Warning: Problem with `mutate()` column `Mod`.
ℹ `Mod = map(a0, get_prior_fit)`.
ℹ There were 2016 divergent transitions after warmup. See
http://mc-stan.org/misc/warnings.html#divergent-transitions-after-warmup
to find out why this is a problem and how to eliminate them.
Warning: Problem with `mutate()` column `Mod`.
ℹ `Mod = map(a0, get_prior_fit)`.
ℹ Examine the pairs() plot to diagnose sampling problems

Warning: Problem with `mutate()` column `Mod`.
ℹ `Mod = map(a0, get_prior_fit)`.
ℹ Bulk Effective Samples Size (ESS) is too low, indicating posterior means and medians may be unreliable.
Running the chains for more iterations may help. See
http://mc-stan.org/misc/warnings.html#bulk-ess
Warning: Problem with `mutate()` column `Mod`.
ℹ `Mod = map(a0, get_prior_fit)`.
ℹ Tail Effective Samples Size (ESS) is too low, indicating posterior variances and tail quantiles may be unreliable.
Running the chains for more iterations may help. See
http://mc-stan.org/misc/warnings.html#tail-ess
Warning: Problem with `mutate()` column `Mod`.
ℹ `Mod = map(a0, get_prior_fit)`.
ℹ There were 2059 divergent transitions after warmup. See
http://mc-stan.org/misc/warnings.html#divergent-transitions-after-warmup
to find out why this is a problem and how to eliminate them.
Warning: Problem with `mutate()` column `Mod`.
ℹ `Mod = map(a0, get_prior_fit)`.
ℹ Examine the pairs() plot to diagnose sampling problems

Warning: Problem with `mutate()` column `Mod`.
ℹ `Mod = map(a0, get_prior_fit)`.
ℹ Bulk Effective Samples Size (ESS) is too low, indicating posterior means and medians may be unreliable.
Running the chains for more iterations may help. See
http://mc-stan.org/misc/warnings.html#bulk-ess
Warning: Problem with `mutate()` column `Mod`.
ℹ `Mod = map(a0, get_prior_fit)`.
ℹ There were 1976 divergent transitions after warmup. See
http://mc-stan.org/misc/warnings.html#divergent-transitions-after-warmup
to find out why this is a problem and how to eliminate them.
Warning: Problem with `mutate()` column `Mod`.
ℹ `Mod = map(a0, get_prior_fit)`.
ℹ Examine the pairs() plot to diagnose sampling problems

Warning: Problem with `mutate()` column `Mod`.
ℹ `Mod = map(a0, get_prior_fit)`.
ℹ Bulk Effective Samples Size (ESS) is too low, indicating posterior means and medians may be unreliable.
Running the chains for more iterations may help. See
http://mc-stan.org/misc/warnings.html#bulk-ess
Warning: Problem with `mutate()` column `Mod`.
ℹ `Mod = map(a0, get_prior_fit)`.
ℹ There were 2088 divergent transitions after warmup. See
http://mc-stan.org/misc/warnings.html#divergent-transitions-after-warmup
to find out why this is a problem and how to eliminate them.
Warning: Problem with `mutate()` column `Mod`.
ℹ `Mod = map(a0, get_prior_fit)`.
ℹ Examine the pairs() plot to diagnose sampling problems

Warning: Problem with `mutate()` column `Mod`.
ℹ `Mod = map(a0, get_prior_fit)`.
ℹ Bulk Effective Samples Size (ESS) is too low, indicating posterior means and medians may be unreliable.
Running the chains for more iterations may help. See
http://mc-stan.org/misc/warnings.html#bulk-ess
Warning: Problem with `mutate()` column `Mod`.
ℹ `Mod = map(a0, get_prior_fit)`.
ℹ There were 2067 divergent transitions after warmup. See
http://mc-stan.org/misc/warnings.html#divergent-transitions-after-warmup
to find out why this is a problem and how to eliminate them.
Warning: Problem with `mutate()` column `Mod`.
ℹ `Mod = map(a0, get_prior_fit)`.
ℹ Examine the pairs() plot to diagnose sampling problems

Warning: Problem with `mutate()` column `Mod`.
ℹ `Mod = map(a0, get_prior_fit)`.
ℹ There were 2110 divergent transitions after warmup. See
http://mc-stan.org/misc/warnings.html#divergent-transitions-after-warmup
to find out why this is a problem and how to eliminate them.
Warning: Problem with `mutate()` column `Mod`.
ℹ `Mod = map(a0, get_prior_fit)`.
ℹ Examine the pairs() plot to diagnose sampling problems

Warning: Problem with `mutate()` column `Mod`.
ℹ `Mod = map(a0, get_prior_fit)`.
ℹ Bulk Effective Samples Size (ESS) is too low, indicating posterior means and medians may be unreliable.
Running the chains for more iterations may help. See
http://mc-stan.org/misc/warnings.html#bulk-ess
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Quitting from lines 67-90 (A250-LevyCaseStudy.Rmd) 
Error: processing vignette 'A250-LevyCaseStudy.Rmd' failed with diagnostics:
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--- failed re-building ‘A250-LevyCaseStudy.Rmd’

--- re-building ‘A260-TITE-CRM.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
Loading required package: Rcpp
--- finished re-building ‘A260-TITE-CRM.Rmd’

--- re-building ‘A300-NeuenschwanderBransonGsponer.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
Loading required package: Rcpp
--- finished re-building ‘A300-NeuenschwanderBransonGsponer.Rmd’

--- re-building ‘A400-EffTox.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
Loading required package: Rcpp
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Quitting from lines 161-163 (A400-EffTox.Rmd) 
Error: processing vignette 'A400-EffTox.Rmd' failed with diagnostics:
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--- failed re-building ‘A400-EffTox.Rmd’

--- re-building ‘A500-HierarchicalBayesianResponse.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
Loading required package: Rcpp
Loading required package: StanHeaders
rstan (Version 2.21.2, GitRev: 2e1f913d3ca3)
For execution on a local, multicore CPU with excess RAM we recommend calling
options(mc.cores = parallel::detectCores()).
To avoid recompilation of unchanged Stan programs, we recommend calling
rstan_options(auto_write = TRUE)

Attaching package: 'dplyr'

The following objects are masked from 'package:stats':

    filter, lag

The following objects are masked from 'package:base':

    intersect, setdiff, setequal, union

ci_level: 0.8 (80% intervals)
outer_level: 0.95 (95% intervals)
Quitting from lines 89-96 (A500-HierarchicalBayesianResponse.Rmd) 
Error: processing vignette 'A500-HierarchicalBayesianResponse.Rmd' failed with diagnostics:
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--- failed re-building ‘A500-HierarchicalBayesianResponse.Rmd’

--- re-building ‘A600-BEBOP.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
Loading required package: Rcpp
ci_level: 0.8 (80% intervals)
outer_level: 0.95 (95% intervals)
Quitting from lines 119-120 (A600-BEBOP.Rmd) 
Error: processing vignette 'A600-BEBOP.Rmd' failed with diagnostics:
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--- failed re-building ‘A600-BEBOP.Rmd’

SUMMARY: processing the following files failed:
  ‘A200-CRM.Rmd’ ‘A210-CRM-visualisation.Rmd’ ‘A250-LevyCaseStudy.Rmd’
  ‘A400-EffTox.Rmd’ ‘A500-HierarchicalBayesianResponse.Rmd’
  ‘A600-BEBOP.Rmd’

Error: Vignette re-building failed.
Execution halted