Error(s) in re-building vignettes:
  ...
--- re-building ‘blackwhitefigures.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.

Attaching package: 'ggplot2'

The following object is masked from 'package:sjlabelled':

    as_label

Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
Data were 'prettified'. Consider using `terms="barthel [all]"` to get smooth plots.
--- finished re-building ‘blackwhitefigures.Rmd’

--- re-building ‘custplot.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
Scale for 'colour' is already present. Adding another scale for 'colour',
which will replace the existing scale.
Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
--- finished re-building ‘custplot.Rmd’

--- re-building ‘plot_interactions.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
--- finished re-building ‘plot_interactions.Rmd’

--- re-building ‘plot_likert_scales.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.

Attaching package: 'dplyr'

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    filter, lag

The following objects are masked from 'package:base':

    intersect, setdiff, setequal, union


Attaching package: 'parameters'

The following object is masked from 'package:sjmisc':

    center

Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
Warning: `guides(<scale> = FALSE)` is deprecated. Please use `guides(<scale> = "none")` instead.
--- finished re-building ‘plot_likert_scales.Rmd’

--- re-building ‘plot_marginal_effects.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
Package `effects` is not available, but needed for `ggeffect()`. Either install package `effects`, or use `ggpredict()`. Calling `ggpredict()` now.FALSE
--- finished re-building ‘plot_marginal_effects.Rmd’

--- re-building ‘plot_model_estimates.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.

Attaching package: 'ggplot2'

The following object is masked from 'package:sjlabelled':

    as_label

This is rstanarm version 2.21.1
- See https://mc-stan.org/rstanarm/articles/priors for changes to default priors!
- Default priors may change, so it's safest to specify priors, even if equivalent to the defaults.
- For execution on a local, multicore CPU with excess RAM we recommend calling
  options(mc.cores = parallel::detectCores())
--- finished re-building ‘plot_model_estimates.Rmd’

--- re-building ‘sjtitemanalysis.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
Install package "strengejacke" from GitHub (`devtools::install_github("strengejacke/strengejacke")`) to load all sj-packages at once!

Attaching package: 'dplyr'

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    filter, lag

The following objects are masked from 'package:base':

    intersect, setdiff, setequal, union

--- finished re-building ‘sjtitemanalysis.Rmd’

--- re-building ‘tab_bayes.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
Loading required package: Rcpp
Loading 'brms' package (version 2.15.0). Useful instructions
can be found by typing help('brms'). A more detailed introduction
to the package is available through vignette('brms_overview').

Attaching package: 'brms'

The following object is masked from 'package:stats':

    ar

--- finished re-building ‘tab_bayes.Rmd’

Segmentation Fault - core dumped
--- re-building ‘tab_mixed.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
Loading required package: Matrix

 *** caught segfault ***
address 51006131, cause 'memory not mapped'

 *** caught segfault ***
address 4, cause 'memory not mapped'

Traceback:
 1: retape(set.defaults = TRUE)
 2: MakeADFun(data.tmb, parameters, map = mapArg, random = randomArg,     profile = NULL, silent = !verbose, DLL = "glmmTMB")
 3: eval(substitute(expr), data, enclos = parent.frame())
 4: eval(substitute(expr), data, enclos = parent.frame())
 5: with.default(TMBStruc, MakeADFun(data.tmb, parameters, map = mapArg,     random = randomArg, profile = NULL, silent = !verbose, DLL = "glmmTMB"))
 6: with(TMBStruc, MakeADFun(data.tmb, parameters, map = mapArg,     random = randomArg, profile = NULL, silent = !verbose, DLL = "glmmTMB"))
 7: fitTMB(TMBStruc)
 8: glmmTMB(count ~ spp + mined + (1 | site), ziformula = ~spp +     mined, family = truncated_poisson(link = "log"), data = Salamanders)
 9: eval(expr, envir, enclos)
10: eval(expr, envir, enclos)
11: withVisible(eval(expr, envir, enclos))
12: withCallingHandlers(withVisible(eval(expr, envir, enclos)), warning = wHandler,     error = eHandler, message = mHandler)
13: handle(ev <- withCallingHandlers(withVisible(eval(expr, envir,     enclos)), warning = wHandler, error = eHandler, message = mHandler))
14: timing_fn(handle(ev <- withCallingHandlers(withVisible(eval(expr,     envir, enclos)), warning = wHandler, error = eHandler, message = mHandler)))
15: evaluate_call(expr, parsed$src[[i]], envir = envir, enclos = enclos,     debug = debug, last = i == length(out), use_try = stop_on_error !=         2L, keep_warning = keep_warning, keep_message = keep_message,     output_handler = output_handler, include_timing = include_timing)
16: evaluate::evaluate(...)
17: evaluate(code, envir = env, new_device = FALSE, keep_warning = !isFALSE(options$warning),     keep_message = !isFALSE(options$message), stop_on_error = if (is.numeric(options$error)) options$error else {        if (options$error && options$include)             0L        else 2L    }, output_handler = knit_handlers(options$render, options))
18: in_dir(input_dir(), evaluate(code, envir = env, new_device = FALSE,     keep_warning = !isFALSE(options$warning), keep_message = !isFALSE(options$message),     stop_on_error = if (is.numeric(options$error)) options$error else {        if (options$error && options$include)             0L        else 2L    }, output_handler = knit_handlers(options$render, options)))
19: eng_r(options)
20: block_exec(params)
21: call_block(x)
22: process_group.block(group)
23: process_group(group)
24: withCallingHandlers(if (tangle) process_tangle(group) else process_group(group),     error = function(e) {        setwd(wd)        cat(res, sep = "\n", file = output %n% "")        message("glmmTMBg from lines ", paste(current_lines(i),             collapse = "-"), " (", knit_concord$get("infile"),             ") ")    })
25: process_file(text, output)
26: knit(input, text = text, envir = envir, quiet = quiet)
27: (if (grepl("\\.[Rr]md$", file)) knit2html else if (grepl("glmmTr]rst$",     file)) knit2pandoc else knit)(file, encoding = encoding,     quiet = quiet, envir = globalenv(), ...)
28: vweave(...)
29: engine$weave(file, quiet = quiet, encoding = enc)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch({    engine$weave(file, quiet = quiet, encoding = enc)    setwd(startdir)    output <- find_vignette_product(name, by = "weave", engine = engine)    if (!have.makefile && vignette_is_tex(output)) {        texi2pdf(file = output, clean = FALSE, quiet = quiet)        output <- find_vignette_product(name, by = "texi2pdf",             engine = engine)    }}, error = function(e) {    OK <<- FALSE    message(gettextf("Error: processing vignette '%s' failed with diagnostics:\n%s",         file, conditionMessage(e)))})
34: tools:::.buildOneVignette("tab_mixed.Rmd", "/home/ripley/R/packages/tests32/sjPlot.Rcheck/vign_test/sjPlot",     TRUE, FALSE, "tab_mixed", "UTF-8", "/tmp/RtmpKca4Ia/working_dir/RtmpjSaaCA/file34e07c8c3e5c.rds")
An irrecoverable exception occurred. R is aborting now ...

Traceback:
 1: retape(set.defaults = TRUE)
 2: MakeADFun(data.tmb, parameters, map = mapArg, random = randomArg,     profile = NULL, silent = !verbose, DLL = "glmmTMB")
 3: eval(substitute(expr), data, enclos = parent.frame())
 4: eval(substitute(expr), data, enclos = parent.frame())
 5: with.default(TMBStruc, MakeADFun(data.tmb, parameters, map = mapArg,     random = randomArg, profile = NULL, silent = !verbose, DLL = "glmmTMB"))
 6: with(TMBStruc, MakeADFun(data.tmb, parameters, map = mapArg,     random = randomArg, profile = NULL, silent = !verbose, DLL = "glmmTMB"))
 7: fitTMB(TMBStruc)
 8: glmmTMB(count ~ spp + mined + (1 | site), ziformula = ~spp +     mined, family = truncated_poisson(link = "log"), data = Salamanders)
 9: eval(expr, envir, enclos)
10: eval(expr, envir, enclos)
11: withVisible(eval(expr, envir, enclos))
12: withCallingHandlers(withVisible(eval(expr, envir, enclos)), warning = wHandler,     error = eHandler, message = mHandler)
13: handle(ev <- withCallingHandlers(withVisible(eval(expr, envir,     enclos)), warning = wHandler, error = eHandler, message = mHandler))
14: timing_fn(handle(ev <- withCallingHandlers(withVisible(eval(expr,     envir, enclos)), warning = wHandler, error = eHandler, message = mHandler)))
15: evaluate_call(expr, parsed$src[[i]], envir = envir, enclos = enclos,     debug = debug, last = i == length(out), use_try = stop_on_error !=         2L, keep_warning = keep_warning, keep_message = keep_message,     output_handler = output_handler, include_timing = include_timing)
16: evaluate::evaluate(...)
17: evaluate(code, envir = env, new_device = FALSE, keep_warning = !isFALSE(options$warning),     keep_message = !isFALSE(options$message), stop_on_error = if (is.numeric(options$error)) options$error else {        if (options$error && options$include)             0L        else 2L    }, output_handler = knit_handlers(options$render, options))
18: in_dir(input_dir(), evaluate(code, envir = env, new_device = FALSE,     keep_warning = !isFALSE(options$warning), keep_message = !isFALSE(options$message),     stop_on_error = if (is.numeric(options$error)) options$error else {        if (options$error && options$include)             0L        else 2L    }, output_handler = knit_handlers(options$render, options)))
19: eng_r(options)
20: block_exec(params)
21: call_block(x)
22: process_group.block(group)
23: process_group(group)
24: withCallingHandlers(if (tangle) process_tangle(group) else process_group(group),     error = function(e) {        setwd(wd)        cat(res, sep = "\n", file = output %n% "")        message("Quitting from lines ", paste(current_lines(i),             collapse = "-"), " (", knit_concord$get("infile"),             ") ")    })
25: process_file(text, output)
26: knit(input, text = text, envir = envir, quiet = quiet)
27: (if (grepl("\\.[Rr]md$", file)) knit2html else if (grepl("\\.[Rr]rst$",     file)) knit2pandoc else knit)(file, encoding = encoding,     quiet = quiet, envir = globalenv(), ...)
28: vweave(...)
29: engine$weave(file, quiet = quiet, encoding = enc)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch({    engine$weave(file, quiet = quiet, encoding = enc)    setwd(startdir)    output <- find_vignette_product(name, by = "weave", engine = engine)    if (!have.makefile && vignette_is_tex(output)) {        texi2pdf(file = output, clean = FALSE, quiet = quiet)        output <- find_vignette_product(name, by = "texi2pdf",             engine = engine)    }}, error = function(e) {    OK <<- FALSE    message(gettextf("Error: processing vignette '%s' failed with diagnostics:\n%s",         file, conditionMessage(e)))})
34: tools:::.buildOneVignette("tab_mixed.Rmd", "/home/ripley/R/packages/tests32/sjPlot.Rcheck/vign_test/sjPlot",     TRUE, FALSE, "tab_mixed", "UTF-8", "/tmp/RtmpKca4Ia/working_dir/RtmpjSaaCA/file34e07c8c3e5c.rds")
An irrecoverable exception occurred. R is aborting now ...
--- re-building ‘tab_model_estimates.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
Classes and Methods for R developed in the
Political Science Computational Laboratory
Department of Political Science
Stanford University
Simon Jackman
hurdle and zeroinfl functions by Achim Zeileis
--- finished re-building ‘tab_model_estimates.Rmd’

--- re-building ‘tab_model_robust.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
Install package "strengejacke" from GitHub (`devtools::install_github("strengejacke/strengejacke")`) to load all sj-packages at once!

Attaching package: 'dplyr'

The following objects are masked from 'package:stats':

    filter, lag

The following objects are masked from 'package:base':

    intersect, setdiff, setequal, union

Loading required package: Matrix
--- finished re-building ‘tab_model_robust.Rmd’

--- re-building ‘table_css.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
Learn more about sjPlot with 'browseVignettes("sjPlot")'.
--- finished re-building ‘table_css.Rmd’

SUMMARY: processing the following file failed:
  ‘tab_mixed.Rmd’

Error: Vignette re-building failed.
Execution halted