Running ‘testthat.R’ [23s/24s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(tergmLite)
  Warning message:
  replacing previous import 'ergm::snctrl' by 'tergm::snctrl' when loading 'tergmLite' 
  > 
  > test_check("tergmLite")
  List of 11
   $ param          :List of 5
    ..- attr(*, "class")= chr [1:2] "param.net" "list"
   $ init           :List of 2
    ..- attr(*, "class")= chr [1:2] "init.net" "list"
   $ control        :List of 32
    ..- attr(*, "class")= chr [1:2] "control.net" "list"
   $ attr           :List of 7
   $ stats          : list()
   $ temp           :List of 2
   $ nwparam        :List of 1
   $ _last_unique_id: int 100
   $ el             :List of 1
   $ p              :List of 1
   $ epi            :List of 6
  List of 11
   $ param          :List of 5
    ..- attr(*, "class")= chr [1:2] "param.net" "list"
   $ init           :List of 2
    ..- attr(*, "class")= chr [1:2] "init.net" "list"
   $ control        :List of 32
    ..- attr(*, "class")= chr [1:2] "control.net" "list"
   $ attr           :List of 7
   $ stats          : list()
   $ temp           :List of 2
   $ nwparam        :List of 1
   $ _last_unique_id: int 100
   $ el             :List of 1
   $ p              :List of 1
   $ epi            :List of 6
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error (test-examples.R:24:5): simulate_network ──────────────────────────────
  Error: The combination of class (f), model constraints and hints ('.attributes' and 'sparse'), reference measure ("Bernoulli"), proposal weighting (default), and conjunctions and disjunctions is not implemented. Check your arguments for typos. 
  Backtrace:
      █
   1. └─EpiModel::initialize.net(x, param, init, control) test-examples.R:24:4
   2.   └─tergmLite::init_tergmLite(dat)
   3.     └─tergmLite:::stergm_prep(...)
   4.       ├─ergm::ergm_proposal(...)
   5.       └─ergm:::ergm_proposal.formula(...)
   6.         ├─ergm::ergm_proposal(conlist, arguments, nw, ..., term.options = term.options)
   7.         └─ergm:::ergm_proposal.ergm_conlist(...)
   8.           └─ergm:::select_ergm_proposal(...)
  ── Error (test-examples.R:73:5): simulate_ergm ─────────────────────────────────
  Error: argument "state" is missing, with no default
  Backtrace:
      █
   1. └─tergmLite::simulate_ergm(p = dat$p[[1]], el = dat$el[[1]], coef = dat$nwparam[[1]]$coef.form) test-examples.R:73:4
   2.   └─tergmLite:::ergm_getMCMCsample(...)
   3.     └─ergm::ergm_MCMC_slave(...)
   4.       └─ergm::is.valued(state)
  ── Error (test-examples.R:98:5): init_tergmLite ────────────────────────────────
  Error: The combination of class (f), model constraints and hints ('.attributes' and 'sparse'), reference measure ("Bernoulli"), proposal weighting (default), and conjunctions and disjunctions is not implemented. Check your arguments for typos. 
  Backtrace:
      █
   1. └─EpiModel::initialize.net(x, param, init, control) test-examples.R:98:4
   2.   └─tergmLite::init_tergmLite(dat)
   3.     └─tergmLite:::stergm_prep(...)
   4.       ├─ergm::ergm_proposal(...)
   5.       └─ergm:::ergm_proposal.formula(...)
   6.         ├─ergm::ergm_proposal(conlist, arguments, nw, ..., term.options = term.options)
   7.         └─ergm:::ergm_proposal.ergm_conlist(...)
   8.           └─ergm:::select_ergm_proposal(...)
  ── Error (test-examples.R:131:5): networkLite ──────────────────────────────────
  Error: The combination of class (f), model constraints and hints ('.attributes' and 'sparse'), reference measure ("Bernoulli"), proposal weighting (default), and conjunctions and disjunctions is not implemented. Check your arguments for typos. 
  Backtrace:
      █
   1. └─EpiModel::initialize.net(x, param, init, control) test-examples.R:131:4
   2.   └─tergmLite::init_tergmLite(dat)
   3.     └─tergmLite:::stergm_prep(...)
   4.       ├─ergm::ergm_proposal(...)
   5.       └─ergm:::ergm_proposal.formula(...)
   6.         ├─ergm::ergm_proposal(conlist, arguments, nw, ..., term.options = term.options)
   7.         └─ergm:::ergm_proposal.ergm_conlist(...)
   8.           └─ergm:::select_ergm_proposal(...)
  ── Error (test-examples.R:201:5): add_vertices ─────────────────────────────────
  Error: The combination of class (f), model constraints and hints ('.attributes' and 'sparse'), reference measure ("Bernoulli"), proposal weighting (default), and conjunctions and disjunctions is not implemented. Check your arguments for typos. 
  Backtrace:
      █
   1. └─EpiModel::initialize.net(x, param, init, control) test-examples.R:201:4
   2.   └─tergmLite::init_tergmLite(dat)
   3.     └─tergmLite:::stergm_prep(...)
   4.       ├─ergm::ergm_proposal(...)
   5.       └─ergm:::ergm_proposal.formula(...)
   6.         ├─ergm::ergm_proposal(conlist, arguments, nw, ..., term.options = term.options)
   7.         └─ergm:::ergm_proposal.ergm_conlist(...)
   8.           └─ergm:::select_ergm_proposal(...)
  ── Error (test-examples.R:236:5): delete_vertices ──────────────────────────────
  Error: The combination of class (f), model constraints and hints ('.attributes' and 'sparse'), reference measure ("Bernoulli"), proposal weighting (default), and conjunctions and disjunctions is not implemented. Check your arguments for typos. 
  Backtrace:
      █
   1. └─EpiModel::initialize.net(x, param, init, control) test-examples.R:236:4
   2.   └─tergmLite::init_tergmLite(dat)
   3.     └─tergmLite:::stergm_prep(...)
   4.       ├─ergm::ergm_proposal(...)
   5.       └─ergm:::ergm_proposal.formula(...)
   6.         ├─ergm::ergm_proposal(conlist, arguments, nw, ..., term.options = term.options)
   7.         └─ergm:::ergm_proposal.ergm_conlist(...)
   8.           └─ergm:::select_ergm_proposal(...)
  ── Error (test-updateModelTermInputs.R:21:5): concurrent ───────────────────────
  Error: The combination of class (f), model constraints and hints ('.attributes' and 'sparse'), reference measure ("Bernoulli"), proposal weighting (default), and conjunctions and disjunctions is not implemented. Check your arguments for typos. 
  Backtrace:
      █
   1. └─EpiModel::initialize.net(est, param, init, control, s = 1) test-updateModelTermInputs.R:21:4
   2.   └─tergmLite::init_tergmLite(dat)
   3.     └─tergmLite:::stergm_prep(...)
   4.       ├─ergm::ergm_proposal(...)
   5.       └─ergm:::ergm_proposal.formula(...)
   6.         ├─ergm::ergm_proposal(conlist, arguments, nw, ..., term.options = term.options)
   7.         └─ergm:::ergm_proposal.ergm_conlist(...)
   8.           └─ergm:::select_ergm_proposal(...)
  ── Error (test-updateModelTermInputs.R:49:5): concurrent_by ────────────────────
  Error: The combination of class (f), model constraints and hints ('.attributes' and 'sparse'), reference measure ("Bernoulli"), proposal weighting (default), and conjunctions and disjunctions is not implemented. Check your arguments for typos. 
  Backtrace:
      █
   1. └─EpiModel::initialize.net(est, param, init, control, s = 1) test-updateModelTermInputs.R:49:4
   2.   └─tergmLite::init_tergmLite(dat)
   3.     └─tergmLite:::stergm_prep(...)
   4.       ├─ergm::ergm_proposal(...)
   5.       └─ergm:::ergm_proposal.formula(...)
   6.         ├─ergm::ergm_proposal(conlist, arguments, nw, ..., term.options = term.options)
   7.         └─ergm:::ergm_proposal.ergm_conlist(...)
   8.           └─ergm:::select_ergm_proposal(...)
  ── Error (test-updateModelTermInputs.R:76:5): degree, single ───────────────────
  Error: The combination of class (f), model constraints and hints ('.attributes' and 'sparse'), reference measure ("Bernoulli"), proposal weighting (default), and conjunctions and disjunctions is not implemented. Check your arguments for typos. 
  Backtrace:
      █
   1. └─EpiModel::initialize.net(est, param, init, control, s = 1) test-updateModelTermInputs.R:76:4
   2.   └─tergmLite::init_tergmLite(dat)
   3.     └─tergmLite:::stergm_prep(...)
   4.       ├─ergm::ergm_proposal(...)
   5.       └─ergm:::ergm_proposal.formula(...)
   6.         ├─ergm::ergm_proposal(conlist, arguments, nw, ..., term.options = term.options)
   7.         └─ergm:::ergm_proposal.ergm_conlist(...)
   8.           └─ergm:::select_ergm_proposal(...)
  ── Error (test-updateModelTermInputs.R:103:5): degree, multiple ────────────────
  Error: The combination of class (f), model constraints and hints ('.attributes' and 'sparse'), reference measure ("Bernoulli"), proposal weighting (default), and conjunctions and disjunctions is not implemented. Check your arguments for typos. 
  Backtrace:
      █
   1. └─EpiModel::initialize.net(est, param, init, control, s = 1) test-updateModelTermInputs.R:103:4
   2.   └─tergmLite::init_tergmLite(dat)
   3.     └─tergmLite:::stergm_prep(...)
   4.       ├─ergm::ergm_proposal(...)
   5.       └─ergm:::ergm_proposal.formula(...)
   6.         ├─ergm::ergm_proposal(conlist, arguments, nw, ..., term.options = term.options)
   7.         └─ergm:::ergm_proposal.ergm_conlist(...)
   8.           └─ergm:::select_ergm_proposal(...)
  ── Error (test-updateModelTermInputs.R:131:5): degree_by_attr ──────────────────
  Error: The combination of class (f), model constraints and hints ('.attributes' and 'sparse'), reference measure ("Bernoulli"), proposal weighting (default), and conjunctions and disjunctions is not implemented. Check your arguments for typos. 
  Backtrace:
      █
   1. └─EpiModel::initialize.net(est, param, init, control, s = 1) test-updateModelTermInputs.R:131:4
   2.   └─tergmLite::init_tergmLite(dat)
   3.     └─tergmLite:::stergm_prep(...)
   4.       ├─ergm::ergm_proposal(...)
   5.       └─ergm:::ergm_proposal.formula(...)
   6.         ├─ergm::ergm_proposal(conlist, arguments, nw, ..., term.options = term.options)
   7.         └─ergm:::ergm_proposal.ergm_conlist(...)
   8.           └─ergm:::select_ergm_proposal(...)
  ── Error (test-updateModelTermInputs.R:158:5): degrange ────────────────────────
  Error: The combination of class (f), model constraints and hints ('.attributes' and 'sparse'), reference measure ("Bernoulli"), proposal weighting (default), and conjunctions and disjunctions is not implemented. Check your arguments for typos. 
  Backtrace:
      █
   1. └─EpiModel::initialize.net(est, param, init, control, s = 1) test-updateModelTermInputs.R:158:4
   2.   └─tergmLite::init_tergmLite(dat)
   3.     └─tergmLite:::stergm_prep(...)
   4.       ├─ergm::ergm_proposal(...)
   5.       └─ergm:::ergm_proposal.formula(...)
   6.         ├─ergm::ergm_proposal(conlist, arguments, nw, ..., term.options = term.options)
   7.         └─ergm:::ergm_proposal.ergm_conlist(...)
   8.           └─ergm:::select_ergm_proposal(...)
  ── Error (test-updateModelTermInputs.R:208:5): nodecov formula ─────────────────
  Error: The combination of class (f), model constraints and hints ('.attributes' and 'sparse'), reference measure ("Bernoulli"), proposal weighting (default), and conjunctions and disjunctions is not implemented. Check your arguments for typos. 
  Backtrace:
      █
   1. └─EpiModel::initialize.net(est, param, init, control, s = 1) test-updateModelTermInputs.R:208:4
   2.   └─tergmLite::init_tergmLite(dat)
   3.     └─tergmLite:::stergm_prep(...)
   4.       ├─ergm::ergm_proposal(...)
   5.       └─ergm:::ergm_proposal.formula(...)
   6.         ├─ergm::ergm_proposal(conlist, arguments, nw, ..., term.options = term.options)
   7.         └─ergm:::ergm_proposal.ergm_conlist(...)
   8.           └─ergm:::select_ergm_proposal(...)
  ── Error (test-updateModelTermInputs.R:237:5): nodecov function ────────────────
  Error: The combination of class (f), model constraints and hints ('.attributes' and 'sparse'), reference measure ("Bernoulli"), proposal weighting (default), and conjunctions and disjunctions is not implemented. Check your arguments for typos. 
  Backtrace:
      █
   1. └─EpiModel::initialize.net(est, param, init, control, s = 1) test-updateModelTermInputs.R:237:4
   2.   └─tergmLite::init_tergmLite(dat)
   3.     └─tergmLite:::stergm_prep(...)
   4.       ├─ergm::ergm_proposal(...)
   5.       └─ergm:::ergm_proposal.formula(...)
   6.         ├─ergm::ergm_proposal(conlist, arguments, nw, ..., term.options = term.options)
   7.         └─ergm:::ergm_proposal.ergm_conlist(...)
   8.           └─ergm:::select_ergm_proposal(...)
  ── Error (test-updateModelTermInputs.R:266:5): nodefactor single ───────────────
  Error: The combination of class (f), model constraints and hints ('.attributes' and 'sparse'), reference measure ("Bernoulli"), proposal weighting (default), and conjunctions and disjunctions is not implemented. Check your arguments for typos. 
  Backtrace:
      █
   1. └─EpiModel::initialize.net(est, param, init, control, s = 1) test-updateModelTermInputs.R:266:4
   2.   └─tergmLite::init_tergmLite(dat)
   3.     └─tergmLite:::stergm_prep(...)
   4.       ├─ergm::ergm_proposal(...)
   5.       └─ergm:::ergm_proposal.formula(...)
   6.         ├─ergm::ergm_proposal(conlist, arguments, nw, ..., term.options = term.options)
   7.         └─ergm:::ergm_proposal.ergm_conlist(...)
   8.           └─ergm:::select_ergm_proposal(...)
  ── Error (test-updateModelTermInputs.R:298:5): nodefactor interaction ──────────
  Error: The combination of class (f), model constraints and hints ('.attributes' and 'sparse'), reference measure ("Bernoulli"), proposal weighting (default), and conjunctions and disjunctions is not implemented. Check your arguments for typos. 
  Backtrace:
      █
   1. └─EpiModel::initialize.net(est, param, init, control, s = 1) test-updateModelTermInputs.R:298:4
   2.   └─tergmLite::init_tergmLite(dat)
   3.     └─tergmLite:::stergm_prep(...)
   4.       ├─ergm::ergm_proposal(...)
   5.       └─ergm:::ergm_proposal.formula(...)
   6.         ├─ergm::ergm_proposal(conlist, arguments, nw, ..., term.options = term.options)
   7.         └─ergm:::ergm_proposal.ergm_conlist(...)
   8.           └─ergm:::select_ergm_proposal(...)
  ── Error (test-updateModelTermInputs.R:327:5): nodemix levels ──────────────────
  Error: The combination of class (f), model constraints and hints ('.attributes' and 'sparse'), reference measure ("Bernoulli"), proposal weighting (default), and conjunctions and disjunctions is not implemented. Check your arguments for typos. 
  Backtrace:
      █
   1. └─EpiModel::initialize.net(est, param, init, control, s = 1) test-updateModelTermInputs.R:327:4
   2.   └─tergmLite::init_tergmLite(dat)
   3.     └─tergmLite:::stergm_prep(...)
   4.       ├─ergm::ergm_proposal(...)
   5.       └─ergm:::ergm_proposal.formula(...)
   6.         ├─ergm::ergm_proposal(conlist, arguments, nw, ..., term.options = term.options)
   7.         └─ergm:::ergm_proposal.ergm_conlist(...)
   8.           └─ergm:::select_ergm_proposal(...)
  ── Error (test-updateModelTermInputs.R:354:5): triangle ────────────────────────
  Error: The combination of class (f), model constraints and hints ('.attributes' and 'sparse'), reference measure ("Bernoulli"), proposal weighting (default), and conjunctions and disjunctions is not implemented. Check your arguments for typos. 
  Backtrace:
      █
   1. └─EpiModel::initialize.net(est, param, init, control, s = 1) test-updateModelTermInputs.R:354:4
   2.   └─tergmLite::init_tergmLite(dat)
   3.     └─tergmLite:::stergm_prep(...)
   4.       ├─ergm::ergm_proposal(...)
   5.       └─ergm:::ergm_proposal.formula(...)
   6.         ├─ergm::ergm_proposal(conlist, arguments, nw, ..., term.options = term.options)
   7.         └─ergm:::ergm_proposal.ergm_conlist(...)
   8.           └─ergm:::select_ergm_proposal(...)
  ── Error (test-updateModelTermInputs.R:382:5): triangle_attr ───────────────────
  Error: The combination of class (f), model constraints and hints ('.attributes' and 'sparse'), reference measure ("Bernoulli"), proposal weighting (default), and conjunctions and disjunctions is not implemented. Check your arguments for typos. 
  Backtrace:
      █
   1. └─EpiModel::initialize.net(est, param, init, control, s = 1) test-updateModelTermInputs.R:382:4
   2.   └─tergmLite::init_tergmLite(dat)
   3.     └─tergmLite:::stergm_prep(...)
   4.       ├─ergm::ergm_proposal(...)
   5.       └─ergm:::ergm_proposal.formula(...)
   6.         ├─ergm::ergm_proposal(conlist, arguments, nw, ..., term.options = term.options)
   7.         └─ergm:::ergm_proposal.ergm_conlist(...)
   8.           └─ergm:::select_ergm_proposal(...)
  ── Error (test-updateModelTermInputs.R:410:5): triangle_attrdiff ───────────────
  Error: The combination of class (f), model constraints and hints ('.attributes' and 'sparse'), reference measure ("Bernoulli"), proposal weighting (default), and conjunctions and disjunctions is not implemented. Check your arguments for typos. 
  Backtrace:
      █
   1. └─EpiModel::initialize.net(est, param, init, control, s = 1) test-updateModelTermInputs.R:410:4
   2.   └─tergmLite::init_tergmLite(dat)
   3.     └─tergmLite:::stergm_prep(...)
   4.       ├─ergm::ergm_proposal(...)
   5.       └─ergm:::ergm_proposal.formula(...)
   6.         ├─ergm::ergm_proposal(conlist, arguments, nw, ..., term.options = term.options)
   7.         └─ergm:::ergm_proposal.ergm_conlist(...)
   8.           └─ergm:::select_ergm_proposal(...)
  ── Error (test-updateModelTermInputs.R:438:5): triangle_attrdifflevels ─────────
  Error: The combination of class (f), model constraints and hints ('.attributes' and 'sparse'), reference measure ("Bernoulli"), proposal weighting (default), and conjunctions and disjunctions is not implemented. Check your arguments for typos. 
  Backtrace:
      █
   1. └─EpiModel::initialize.net(est, param, init, control, s = 1) test-updateModelTermInputs.R:438:4
   2.   └─tergmLite::init_tergmLite(dat)
   3.     └─tergmLite:::stergm_prep(...)
   4.       ├─ergm::ergm_proposal(...)
   5.       └─ergm:::ergm_proposal.formula(...)
   6.         ├─ergm::ergm_proposal(conlist, arguments, nw, ..., term.options = term.options)
   7.         └─ergm:::ergm_proposal.ergm_conlist(...)
   8.           └─ergm:::select_ergm_proposal(...)
  ── Error (test-updateModelTermInputs.R:455:5): gwesp_true ──────────────────────
  Error: Term 'gwesp' with 'fixed=TRUE' requires a decay parameter 'decay'.
  Backtrace:
      █
   1. └─EpiModel::netest(...) test-updateModelTermInputs.R:455:4
   2.   └─ergm::ergm(...)
   3.     └─ergm::ergm_model(...)
   4.       └─ergm::call.ErgmTerm(...)
   5.         └─base::eval(termCall, env)
   6.           └─base::eval(termCall, env)
   7.             └─ergm:::InitErgmTerm.gwesp(...)
  ── Error (test-updateModelTermInputs.R:493:5): gwesp_truedecay ─────────────────
  Error: The combination of class (f), model constraints and hints ('.attributes' and 'sparse'), reference measure ("Bernoulli"), proposal weighting (default), and conjunctions and disjunctions is not implemented. Check your arguments for typos. 
  Backtrace:
      █
   1. └─EpiModel::initialize.net(est, param, init, control, s = 1) test-updateModelTermInputs.R:493:4
   2.   └─tergmLite::init_tergmLite(dat)
   3.     └─tergmLite:::stergm_prep(...)
   4.       ├─ergm::ergm_proposal(...)
   5.       └─ergm:::ergm_proposal.formula(...)
   6.         ├─ergm::ergm_proposal(conlist, arguments, nw, ..., term.options = term.options)
   7.         └─ergm:::ergm_proposal.ergm_conlist(...)
   8.           └─ergm:::select_ergm_proposal(...)
  
  [ FAIL 23 | WARN 2 | SKIP 0 | PASS 0 ]
  Error: Test failures
  Execution halted