installed size is  5.5Mb
  sub-directories of 1Mb or more:
    data   2.4Mb
    libs   2.8Mb
installed size is  6.4Mb
  sub-directories of 1Mb or more:
    doc       3.3Mb
    libs      1.7Mb
    telemac   1.0Mb
Running examples in 'telemac-Ex.R' failed
The error most likely occurred in:

> ### Name: optionals
> ### Title: Optional input files
> ### Aliases: optionals optionals.character optionals.list optionals.t2d_opt
> ###   print.t2d_opt print.t2d_opt_LINES
> 
> ### ** Examples
> 
> # t2d_opt object
> opt_obj <- optionals(c("# test file", "col1 col2", "1 2", "3 4"), fname = "optional.txt")
Error in validate_opt(new_opt(optlines, fname)) : 
  inherits(x$file, "character") is not TRUE
Calls: optionals -> optionals.character -> validate_opt -> stopifnot
Execution halted
Running examples in 'telemac-Ex.R' failed
The error most likely occurred in:

> ### Name: optionals
> ### Title: Optional input files
> ### Aliases: optionals optionals.character optionals.list optionals.t2d_opt
> ###   print.t2d_opt print.t2d_opt_LINES
> 
> ### ** Examples
> 
> # t2d_opt object
> opt_obj <- optionals(c("# test file", "col1 col2", "1 2", "3 4"), fname = "optional.txt")
Error in validate_opt(new_opt(optlines, fname)) : 
  inherits(x$file, "character") is not TRUE
Calls: optionals -> optionals.character -> validate_opt -> stopifnot
Execution halted
TER.deesc.1.B : A1.f: no visible binding for '<<-' assignment to 'ID'
TER.deesc.1.B : A1.f: no visible binding for global variable 'ID'
TER.deesc.1.B : A2.n.f: no visible binding for '<<-' assignment to 'ID'
TER.deesc.1.B : A2.n.f: no visible binding for global variable 'ID'
TER.deesc.1.B: no visible binding for '<<-' assignment to 'ID'
TER.deesc.1.B: no visible binding for global variable 'ID'
TER.deesc.A.B : A1.f: no visible binding for '<<-' assignment to 'ID'
TER.deesc.A.B : A1.f: no visible binding for global variable 'ID'
TER.deesc.A.B : A3.f: no visible binding for '<<-' assignment to 'ID'
TER.deesc.A.B : A3.f: no visible binding for global variable 'ID'
TER.deesc.A.B : A2.f: no visible binding for '<<-' assignment to 'ID'
TER.deesc.A.B : A2.f: no visible binding for global variable 'ID'
TER.deesc.A.B : B1.f: no visible binding for '<<-' assignment to 'ID'
TER.deesc.A.B : B1.f: no visible binding for global variable 'ID'
TER.deesc.A.B: no visible binding for '<<-' assignment to 'ID'
TER.deesc.A.B: no visible binding for global variable 'ID'
Undefined global functions or variables:
  ID
installed size is 106.7Mb
  sub-directories of 1Mb or more:
    R      2.7Mb
    gdal   2.1Mb
    libs  92.6Mb
    proj   8.7Mb
installed size is 28.4Mb
  sub-directories of 1Mb or more:
    doc        1.0Mb
    libs      13.3Mb
    tessdata  14.0Mb
Package suggested but not available for checking: 'gurobi'
plot.Lfd: no visible global function definition for 'plot'
Undefined global functions or variables:
  plot
Consider adding
  importFrom("graphics", "plot")
to your NAMESPACE file.
installed size is  8.0Mb
  sub-directories of 1Mb or more:
    data   2.6Mb
    doc    2.9Mb
    libs   1.9Mb
installed size is  8.6Mb
  sub-directories of 1Mb or more:
    data   8.5Mb
phyper_right: no visible global function definition for 'dhyper'
progression: no visible global function definition for 'density'
progression: no visible global function definition for 'plot'
progression: no visible global function definition for 'points'
progression: no visible global function definition for 'legend'
progression: no visible global function definition for 'text'
specificities.distribution.plot: no visible global function definition
  for 'dhyper'
specificities.distribution.plot: no visible global function definition
  for 'plot'
specificities.distribution.plot: no visible global function definition
  for 'Axis'
specificities.distribution.plot: no visible global function definition
  for 'arrows'
specificities.distribution.plot: no visible global function definition
  for 'text'
specificities.distribution.plot: no visible global function definition
  for 'title'
specificities.probabilities.vector: no visible global function
  definition for 'phyper'
Undefined global functions or variables:
  Axis arrows density dhyper legend phyper plot points text title
Consider adding
  importFrom("graphics", "Axis", "arrows", "legend", "plot", "points",
             "text", "title")
  importFrom("stats", "density", "dhyper", "phyper")
to your NAMESPACE file.
installed size is  5.2Mb
  sub-directories of 1Mb or more:
    libs   5.0Mb
ParseTrueFX: no visible global function definition for 'read.csv'
TrueFXRef: no visible global function definition for 'download.file'
TrueFXRef: no visible global function definition for 'browseURL'
Undefined global functions or variables:
  browseURL download.file read.csv
Consider adding
  importFrom("utils", "browseURL", "download.file", "read.csv")
to your NAMESPACE file.
installed size is  5.0Mb
  sub-directories of 1Mb or more:
    doc    2.8Mb
    libs   1.8Mb
installed size is  8.5Mb
  sub-directories of 1Mb or more:
    data   1.1Mb
    rda    7.1Mb
Malformed Description field: should contain one or more complete sentences.
Thinknum: no visible global function definition for 'URLencode'
Undefined global functions or variables:
  URLencode
Consider adding
  importFrom("utils", "URLencode")
to your NAMESPACE file.
coef_traceplot: no visible global function definition for 'rainbow'
coef_traceplot: no visible global function definition for 'plot'
coef_traceplot: no visible global function definition for 'abline'
coef_traceplot : <anonymous>: no visible global function definition for
  'lines'
coef_traceplot: no visible global function definition for 'text'
ee.GEE.aux : <anonymous>: no visible global function definition for
  'combn'
Undefined global functions or variables:
  abline combn lines plot rainbow text
Consider adding
  importFrom("grDevices", "rainbow")
  importFrom("graphics", "abline", "lines", "plot", "text")
  importFrom("utils", "combn")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/Thresher.Rcheck/00install.out'* DONE
Installation failed.
See  for details.
*
summary.tsls: no visible global function definition for 'printCoefmat'
threesls: no visible global function definition for 'cor'
threesls: no visible global function definition for 'pt'
tsls.formula: no visible global function definition for 'model.matrix'
tsls.formula: no visible global function definition for
  'model.response'
Undefined global functions or variables:
  cor model.matrix model.response printCoefmat pt
Consider adding
  importFrom("stats", "cor", "model.matrix", "model.response",
             "printCoefmat", "pt")
to your NAMESPACE file.
installed size is  5.5Mb
  sub-directories of 1Mb or more:
    libs   5.2Mb
GNU make is a SystemRequirements.
.LoadTickDataHK: no visible global function definition for 'read.csv'
.LoadTickDataSHSZ: no visible global function definition for 'read.csv'
DrawDown: no visible global function definition for 'na.omit'
PerformanceReport: no visible global function definition for
  'aggregate'
PerformanceReport: no visible global function definition for 'sd'
Undefined global functions or variables:
  aggregate na.omit read.csv sd
Consider adding
  importFrom("stats", "aggregate", "na.omit", "sd")
  importFrom("utils", "read.csv")
to your NAMESPACE file.
Installation failed.
See  for details.
Installation failed.
See  for details.
installed size is  5.1Mb
  sub-directories of 1Mb or more:
    doc   4.3Mb
Running 'testthat.R' [18s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(tidystats)
  Welcome to tidystats 0.5.
  Please note that this update (again) breaks much of the code from previous versions; so please check your old code carefully.
  > 
  > test_check("tidystats")
  == Failed tests ================================================================
  -- Error (test_htest.R:14:3): one sample t-tests works -------------------------
  Error: 'formula' missing or incorrect
  Backtrace:
      x
   1. +-stats::t.test(extra ~ 1, data = sleep) test_htest.R:14:2
   2. \-stats:::t.test.formula(extra ~ 1, data = sleep)
  -- Failure (test_htest.R:168:3): wilcoxon signed rank exact tests works --------
  `tidy_model` not equal to `tidy_model_test`.
  Component "method": 1 string mismatch
  -- Failure (test_htest.R:212:3): wilcoxon rank sum tests works -----------------
  `tidy_model` not equal to `tidy_model_test`.
  Component "method": 1 string mismatch
  
  [ FAIL 3 | WARN 0 | SKIP 0 | PASS 68 ]
  Error: Test failures
  Execution halted
installed size is  6.2Mb
  sub-directories of 1Mb or more:
    doc       1.3Mb
    extdata   4.4Mb
Malformed Description field: should contain one or more complete sentences.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/tiledb.Rcheck/00install.out' for details.
'library' or 'require' call to 'shiny' in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Package in Depends field not imported from: 'ggplot2'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
timeline: no visible global function definition for 'ggplot'
timeline: no visible global function definition for 'geom_segment'
timeline: no visible global function definition for 'aes_string'
timeline: no visible global function definition for 'geom_rect'
timeline: no visible global function definition for 'geom_text'
timeline: no visible global function definition for 'theme'
timeline: no visible global function definition for 'element_blank'
timeline: no visible global function definition for 'xlab'
timeline: no visible global function definition for 'ylab'
timeline: no visible global function definition for 'xlim'
timeline: no visible global function definition for
  'scale_y_continuous'
timeline: no visible global function definition for 'geom_point'
timeline: no visible global function definition for 'scale_color_grey'
timeline: no visible global function definition for 'geom_hline'
Undefined global functions or variables:
  aes_string element_blank geom_hline geom_point geom_rect geom_segment
  geom_text ggplot scale_color_grey scale_y_continuous theme xlab xlim
  ylab
'library' or 'require' calls in package code:
  'ggplot2' 'plyr'
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Packages in Depends field not imported from:
  'Matrix' 'lubridate' 'timeDate'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
is.Bizday: no visible global function definition for 'isWeekday'
plotCalendarHeatmap: no visible global function definition for 'ddply'
plotCalendarHeatmap: no visible global function definition for '.'
plotCalendarHeatmap: no visible binding for global variable 'year'
plotCalendarHeatmap: no visible binding for global variable 'month'
plotCalendarHeatmap: no visible binding for global variable 'week'
plotCalendarHeatmap: no visible global function definition for 'ggplot'
plotCalendarHeatmap: no visible global function definition for 'aes'
plotCalendarHeatmap: no visible binding for global variable 'monthweek'
plotCalendarHeatmap: no visible binding for global variable 'weekday'
plotCalendarHeatmap: no visible global function definition for
  'geom_tile'
plotCalendarHeatmap: no visible global function definition for
  'facet_grid'
plotCalendarHeatmap: no visible global function definition for
  'scale_fill_gradientn'
projectDate: no visible global function definition for 'holidayNYSE'
projectDate: no visible global function definition for
  'sparse.model.matrix'
Undefined global functions or variables:
  . aes ddply facet_grid geom_tile ggplot holidayNYSE isWeekday month
  monthweek scale_fill_gradientn sparse.model.matrix week weekday year
Malformed Description field: should contain one or more complete sentences.
'library' or 'require' call to 'boot' which was already attached by Depends.
  Please remove these calls from your code.
Package in Depends field not imported from: 'boot'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
boot_autocov: no visible global function definition for 'is.ts'
boot_autocov: no visible global function definition for 'tsboot'
boot_autocov: no visible global function definition for 'quantile'
boot_autocov: no visible global function definition for 'par'
boot_autocov: no visible global function definition for 'frequency'
boot_autocov: no visible global function definition for 'polygon'
boot_autocov: no visible global function definition for 'lines'
boot_autocov: no visible global function definition for 'abline'
boot_autocov: no visible global function definition for 'acf'
boot_spec: no visible global function definition for 'is.ts'
boot_spec: no visible global function definition for 'tsboot'
boot_spec: no visible global function definition for 'spec.pgram'
boot_spec: no visible global function definition for 'quantile'
boot_spec: no visible global function definition for 'polygon'
boot_spec: no visible global function definition for 'lines'
redraw: no visible global function definition for 'spec.pgram'
statistic: no visible global function definition for 'acf'
Undefined global functions or variables:
  abline acf frequency is.ts lines par polygon quantile spec.pgram
  tsboot
Consider adding
  importFrom("graphics", "abline", "lines", "par", "polygon")
  importFrom("stats", "acf", "frequency", "is.ts", "quantile",
             "spec.pgram")
to your NAMESPACE file.
author.search: no visible binding for global variable 'na.omit'
reference.list: no visible global function definition for 'na.omit'
Undefined global functions or variables:
  na.omit
Consider adding
  importFrom("stats", "na.omit")
to your NAMESPACE file.
drawGraph: no visible global function definition for 'pdf'
drawGraph: no visible global function definition for 'par'
drawGraph: no visible global function definition for 'plot'
drawGraph: no visible global function definition for 'segments'
drawGraph: no visible global function definition for 'lines'
drawGraph: no visible global function definition for 'text'
drawGraph: no visible global function definition for 'dev.off'
drugRank: no visible global function definition for 'aggregate'
floating2: no visible global function definition for 'cor'
timma: no visible global function definition for 'median'
timma: no visible global function definition for 'write.table'
Undefined global functions or variables:
  aggregate cor dev.off lines median par pdf plot segments text
  write.table
Consider adding
  importFrom("grDevices", "dev.off", "pdf")
  importFrom("graphics", "lines", "par", "plot", "segments", "text")
  importFrom("stats", "aggregate", "cor", "median")
  importFrom("utils", "write.table")
to your NAMESPACE file.
See * 
Check process probably crashed or hung up for 20 minutes ... killed
Most likely this happened in the example checks (?),
if not, ignore the following last lines of example output:

======== End of example output (where/before crash/hang up occured ?) ========
installed size is  6.8Mb
  sub-directories of 1Mb or more:
    data   5.1Mb
    libs   1.4Mb
tipom.car: no visible global function definition for 'abline'
tipom.car: no visible global function definition for 'axis'
tipom.heat: no visible global function definition for 'image'
tipom.heat: no visible global function definition for 'gray'
tipom.lw: no visible global function definition for 'plot'
tipom.lw: no visible global function definition for 'abline'
Undefined global functions or variables:
  abline axis gray image plot
Consider adding
  importFrom("grDevices", "gray")
  importFrom("graphics", "abline", "axis", "image", "plot")
to your NAMESPACE file.
Installation failed.
See  for details.
FLXmclust.Density: no visible global function definition for 'dmvnorm'
FLXmclust.Estimate: no visible global function definition for 'flexmix'
FLXmclust.Estimate: no visible global function definition for
  'FLXmclust'
coefmclust: no visible global function definition for 'parameters'
flexmix.Density: no visible global function definition for
  'model.matrix'
flexmix.Density: no visible global function definition for
  'model.response'
flexmix.Density: no visible global function definition for
  'model.frame'
flexmix.Density: no visible global function definition for 'dnorm'
flexmix.Density: no visible global function definition for 'dpois'
flexmix.Density: no visible global function definition for 'dbinom'
flexmix.Estimate: no visible global function definition for 'flexmix'
flexmix.Estimate: no visible global function definition for 'FLXglm'
tleplot,TLE-data.frame: no visible global function definition for
  'legend'
Undefined global functions or variables:
  FLXglm FLXmclust dbinom dmvnorm dnorm dpois flexmix legend
  model.frame model.matrix model.response parameters
Consider adding
  importFrom("graphics", "legend")
  importFrom("stats", "dbinom", "dnorm", "dpois", "model.frame",
             "model.matrix", "model.response")
to your NAMESPACE file.
'library' or 'require' call to 'mvtnorm' which was already attached by Depends.
  Please remove these calls from your code.
Package in Depends field not imported from: 'mvtnorm'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
EMN: no visible global function definition for 'dmvnorm'
EMN: no visible global function definition for 'pmvnorm'
EMT: no visible global function definition for 'GenzBretz'
EMT: no visible global function definition for 'dmvt'
EMT: no visible global function definition for 'pmvt'
MomemNT: no visible global function definition for 'pnorm'
MomemNT: no visible global function definition for 'dnorm'
MomemNT: no visible global function definition for 'pmvnorm'
MomemNT: no visible global function definition for 'dmvnorm'
TT.moment: no visible global function definition for 'GenzBretz'
TT.moment: no visible global function definition for 'pmvt'
TT.moment: no visible global function definition for 'dt'
TT.moment: no visible global function definition for 'pt'
TT.moment: no visible global function definition for 'dmvt'
cdfNI: no visible global function definition for 'pnorm'
cdfNI: no visible global function definition for 'pt'
inits: no visible global function definition for 'lm'
Undefined global functions or variables:
  GenzBretz dmvnorm dmvt dnorm dt lm pmvnorm pmvt pnorm pt
Consider adding
  importFrom("stats", "dnorm", "dt", "lm", "pnorm", "pt")
to your NAMESPACE file.
Installation failed.
See  for details.
extractContentDOM: no visible global function definition for
  'capture.output'
extractHTMLStrip: no visible global function definition for
  'capture.output'
Undefined global functions or variables:
  capture.output
Consider adding
  importFrom("utils", "capture.output")
to your NAMESPACE file.
Packages suggested but not available for checking:
  'Rcampdf', 'Rpoppler', 'tm.lexicon.GeneralInquirer'
Package unavailable to check Rd xrefs: 'Rpoppler'
Running examples in 'TNRS-Ex.R' failed
The error most likely occurred in:

> ### Name: TNRS
> ### Title: Resolve plant taxonomic names
> ### Aliases: TNRS
> 
> ### ** Examples
> 
> {
+ #Take a subset of the testfile to speed up runtime                  
+ tnrs_testfile <- tnrs_testfile[1:20,]
+  
+ results <- TNRS(taxonomic_names = tnrs_testfile)
+   
+ # Inspect the results
+ head(results, 10)
+ }
Error in function (type, msg, asError = TRUE)  : 
  error:1407742E:SSL routines:SSL23_GET_SERVER_HELLO:tlsv1 alert protocol version
Calls: TNRS ... .TNRS_base -> postForm -> .postForm -> <Anonymous> -> fun
Execution halted
Error(s) in re-building vignettes:
--- re-building 'TNRS_vignette.Rmd' using rmarkdown
Quitting from lines 30-50 (TNRS_vignette.Rmd) 
Error: processing vignette 'TNRS_vignette.Rmd' failed with diagnostics:
error:1407742E:SSL routines:SSL23_GET_SERVER_HELLO:tlsv1 alert protocol version
--- failed re-building 'TNRS_vignette.Rmd'

SUMMARY: processing the following file failed:
  'TNRS_vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See  for details.
Installation failed.
See  for details.
Package suggested but not available for checking: 'corpus.JSS.papers'
Installation failed.
See  for details.
Missing or unexported object: 'torch::torch_rfft'
installed size is 30.8Mb
  sub-directories of 1Mb or more:
    R      4.2Mb
    help   1.4Mb
    libs  24.6Mb
Package suggested but not available for checking: 'toscaData'
Malformed Description field: should contain one or more complete sentences.
Tosls.formula: no visible global function definition for 'model.matrix'
Tosls.formula: no visible global function definition for
  'model.response'
summary: no visible global function definition for 'coef'
summary: no visible global function definition for 'pt'
Undefined global functions or variables:
  coef model.matrix model.response pt
Consider adding
  importFrom("stats", "coef", "model.matrix", "model.response", "pt")
to your NAMESPACE file.
Installation failed.
*
ConfA: no visible global function definition for 'qf'
EstM2Sn: no visible global function definition for 'nlm'
EstM2Sn: no visible global function definition for 'qnorm'
TV.model: no visible global function definition for 'dev.new'
TV.model: no visible global function definition for 'points'
betaBino: no visible global function definition for 'pbinom'
doseD: no visible global function definition for 'lm'
doseD: no visible global function definition for 'dev.new'
doseD: no visible global function definition for 'par'
doseD: no visible global function definition for 'plot'
doseD: no visible global function definition for 'axTicks'
doseD: no visible global function definition for 'axis'
doseD: no visible global function definition for 'lines'
doseD: no visible global function definition for 'abline'
doseD: no visible global function definition for 'legend'
setD: no visible global function definition for 'dev.new'
setD: no visible global function definition for 'par'
setD: no visible global function definition for 'pbinom'
setD: no visible global function definition for 'abline'
setD: no visible global function definition for 'axis'
setD: no visible global function definition for 'rect'
setD: no visible global function definition for 'lines'
setD: no visible global function definition for 'text'
setD: no visible global function definition for 'axTicks'
setD: no visible global function definition for 'legend'
spoD : spoD_A: no visible global function definition for 'chisq.test'
Undefined global functions or variables:
  abline axTicks axis chisq.test dev.new legend lines lm nlm par pbinom
  plot points qf qnorm rect text
Consider adding
  importFrom("grDevices", "dev.new")
  importFrom("graphics", "abline", "axTicks", "axis", "legend", "lines",
             "par", "plot", "points", "rect", "text")
  importFrom("stats", "chisq.test", "lm", "nlm", "pbinom", "qf", "qnorm")
to your NAMESPACE file.
align1d : obj: no visible global function definition for 'dist'
align2d : obj: no visible global function definition for 'dist'
align2d : pen: no visible global function definition for 'dist'
align2d: no visible global function definition for 'dist'
sumt: no visible global function definition for 'optim'
tpe1d: no visible global function definition for 'hclust'
tpe2d: no visible global function definition for 'hclust'
tpe2d: no visible global function definition for 'cmdscale'
Undefined global functions or variables:
  cmdscale dist hclust optim
Consider adding
  importFrom("stats", "cmdscale", "dist", "hclust", "optim")
to your NAMESPACE file.
File 'tpr/libs/i386/tpr.dll':
  Found '_ZSt4cerr', possibly from 'std::cerr' (C++)
    Object: 'utils.o'
File 'tpr/libs/x64/tpr.dll':
  Found '_ZSt4cerr', possibly from 'std::cerr' (C++)
    Object: 'utils.o'

Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs.

See 'Writing portable packages' in the 'Writing R Extensions' manual.
installed size is  6.1Mb
  sub-directories of 1Mb or more:
    data   2.4Mb
    doc    2.7Mb
Installation failed.
See  for details.
Installation failed.
See  for details.
Installation failed.
See  for details.
Package suggested but not available for checking: 'taxidata'
Installation failed.
See  for details.
installed size is 21.9Mb
  sub-directories of 1Mb or more:
    libs  19.9Mb
Malformed Description field: should contain one or more complete sentences.
microsoftTranslate: no visible global function definition for
  'URLencode'
Undefined global functions or variables:
  URLencode
Consider adding
  importFrom("utils", "URLencode")
to your NAMESPACE file.
BugReports field is not a suitable URL but appears to contain an email address
  not specified by mailto: nor contained in < >
rtrapezoid: no visible global function definition for 'runif'
Undefined global functions or variables:
  runif
Consider adding
  importFrom("stats", "runif")
to your NAMESPACE file.
Error(s) in re-building vignettes:
--- re-building 'treasuryTR.Rmd' using rmarkdown
Loading required package: quantmod
Loading required package: xts
Loading required package: zoo

Attaching package: 'zoo'

The following objects are masked from 'package:base':

    as.Date, as.Date.numeric

Loading required package: TTR
Loading required package: dplyr

Attaching package: 'dplyr'

The following objects are masked from 'package:xts':

    first, last

The following objects are masked from 'package:stats':

    filter, lag

The following objects are masked from 'package:base':

    intersect, setdiff, setequal, union

'getSymbols' currently uses auto.assign=TRUE by default, but will
use auto.assign=FALSE in 0.5-0. You will still be able to use
'loadSymbols' to automatically load data. getOption("getSymbols.env")
and getOption("getSymbols.auto.assign") will still be checked for
alternate defaults.

This message is shown once per session and may be disabled by setting 
options("getSymbols.warning4.0"=FALSE). See ?getSymbols for details.

Quitting from lines 45-62 (treasuryTR.Rmd) 
Error: processing vignette 'treasuryTR.Rmd' failed with diagnostics:
Unable to import "DGS1".
HTTP error 503.
--- failed re-building 'treasuryTR.Rmd'

SUMMARY: processing the following file failed:
  'treasuryTR.Rmd'

Error: Vignette re-building failed.
Execution halted
Package suggested but not available for checking: 'TreeDistData'
Build_JTree: no visible global function definition for 'flush.console'
Run_JTree: no visible global function definition for 'cov2cor'
Undefined global functions or variables:
  cov2cor flush.console
Consider adding
  importFrom("stats", "cov2cor")
  importFrom("utils", "flush.console")
to your NAMESPACE file.
LikAge: no visible global function definition for 'read.table'
bd.ME.optim: no visible global function definition for 'optim'
bd.ME.optim.rho: no visible global function definition for 'optim'
bd.ME.optim.rho.all: no visible global function definition for 'optim'
bd.MEyule.optim: no visible global function definition for 'optimize'
bd.MEyule.optim: no visible global function definition for 'optim'
bd.age.optim.matlab: no visible global function definition for
  'read.table'
bd.groups.conf: no visible global function definition for 'uniroot'
bd.shifts.plot: no visible global function definition for 'plot'
bd.shifts.plot: no visible global function definition for 'lines'
bdsky.stt.optim: no visible global function definition for 'optim'
create.mat: no visible global function definition for 'write.table'
Undefined global functions or variables:
  lines optim optimize plot read.table uniroot write.table
Consider adding
  importFrom("graphics", "lines", "plot")
  importFrom("stats", "optim", "optimize", "uniroot")
  importFrom("utils", "read.table", "write.table")
to your NAMESPACE file.
plot.treeperm: no visible global function definition for 'hist'
plot.treeperm: no visible global function definition for 'points'
plot.treeperm: no visible global function definition for 'text'
treeperm.formula: no visible global function definition for
  'model.frame'
treeperm.formula: no visible global function definition for
  'model.response'
Undefined global functions or variables:
  hist model.frame model.response points text
Consider adding
  importFrom("graphics", "hist", "points", "text")
  importFrom("stats", "model.frame", "model.response")
to your NAMESPACE file.
Installation failed.
See  for details.
* DONE

Check process probably crashed or hung up for 20 minutes ... killed
Most likely this happened in the example checks (?),
if not, ignore the following last lines of example output:

======== End of example output (where/before crash/hang up occured ?) ========
Installation failed.
See  for details.
* DONE

Check process probably crashed or hung up for 20 minutes ... killed
Most likely this happened in the example checks (?),
if not, ignore the following last lines of example output:

======== End of example output (where/before crash/hang up occured ?) ========
installed size is 17.7Mb
  sub-directories of 1Mb or more:
    doc    3.8Mb
    libs  12.9Mb
GNU make is a SystemRequirements.
cinbag: no visible global function definition for 'var'
trimTrees: no visible global function definition for 'predict'
Undefined global functions or variables:
  predict var
Consider adding
  importFrom("stats", "predict", "var")
to your NAMESPACE file.
'library' or 'require' calls to packages already attached by Depends:
  'gtools' 'mgcv'
  Please remove these calls from your code.
Packages in Depends field not imported from:
  'gtools' 'mgcv' 'msm'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
HtoGp: no visible global function definition for 'odd'
HtoGp: no visible global function definition for 'even'
plot.pirls.gam: no visible global function definition for 'par'
plot.pirls.gam: no visible global function definition for 'plot'
plot.pirls.gam: no visible global function definition for 'title'
plot.pirls.gam: no visible global function definition for 'lines'
plot.pirls.gam: no visible global function definition for 'rug'
plot.pirls.gam: no visible global function definition for 'mtext'
test.trioGxE: no visible global function definition for 'write.table'
trioGxE: no visible global function definition for 'quantile'
trioGxE: no visible global function definition for 'qtnorm'
trioplot: no visible global function definition for 'quantile'
trioplot: no visible global function definition for 'formula'
trioplot: no visible global function definition for 'gam'
trioplot: no visible global function definition for 'binomial'
Undefined global functions or variables:
  binomial even formula gam lines mtext odd par plot qtnorm quantile
  rug title write.table
Consider adding
  importFrom("graphics", "lines", "mtext", "par", "plot", "rug", "title")
  importFrom("stats", "binomial", "formula", "quantile")
  importFrom("utils", "write.table")
to your NAMESPACE file.
Malformed Title field: should not end in a period.
DrawMargin: no visible global function definition for 'qnorm'
DrawProbability: no visible global function definition for 'pnorm'
Factor: no visible global function definition for 'new'
Gaussian: no visible global function definition for 'new'
LikelihoodFactor: no visible global function definition for 'new'
Parameters: no visible global function definition for 'new'
Player: no visible global function definition for 'new'
PriorFactor: no visible global function definition for 'new'
SumFactor: no visible global function definition for 'new'
TruncateFactor: no visible global function definition for 'new'
Variable: no visible global function definition for 'new'
Vdraw: no visible global function definition for 'dnorm'
Vdraw: no visible global function definition for 'pnorm'
Vwin: no visible global function definition for 'dnorm'
Vwin: no visible global function definition for 'pnorm'
Wdraw: no visible global function definition for 'dnorm'
Wdraw: no visible global function definition for 'pnorm'
Undefined global functions or variables:
  dnorm new pnorm qnorm
Consider adding
  importFrom("methods", "new")
  importFrom("stats", "dnorm", "pnorm", "qnorm")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Malformed Description field: should contain one or more complete sentences.
Package in Depends field not imported from: 'MASS'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
cdens: no visible global function definition for 'head'
dplot: no visible global function definition for 'knots'
dplot: no visible global function definition for 'median'
dplot: no visible global function definition for 'par'
dplot: no visible global function definition for 'plot.stepfun'
dplot: no visible global function definition for 'abline'
edf: no visible global function definition for 'approxfun'
mctest : rdist: no visible global function definition for 'runif'
mctest : S: no visible global function definition for 'optim'
qplot: no visible global function definition for 'plot'
qplot: no visible global function definition for 'abline'
Undefined global functions or variables:
  abline approxfun head knots median optim par plot plot.stepfun runif
Consider adding
  importFrom("graphics", "abline", "par", "plot")
  importFrom("stats", "approxfun", "knots", "median", "optim",
             "plot.stepfun", "runif")
  importFrom("utils", "head")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
Installation failed.
See * DONE
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/TScompare.Rcheck/00install.out'*
Qhat: no visible global function definition for 'pnorm'
plrt: no visible global function definition for 'uniroot'
plrt: no visible global function definition for 'optimize'
simulatedata: no visible global function definition for 'rnorm'
tsc.test: no visible global function definition for 'shapiro.test'
tsc.test: no visible global function definition for 'p.adjust'
tsc.test: no visible global function definition for 'glm'
tsc.test : f: no visible global function definition for 'pnorm'
tsc.test: no visible global function definition for 'uniroot'
tsc.test: no visible global function definition for 'optimize'
variance: no visible global function definition for 'density'
variance: no visible global function definition for 'ecdf'
Undefined global functions or variables:
  density ecdf glm optimize p.adjust pnorm rnorm shapiro.test uniroot
Consider adding
  importFrom("stats", "density", "ecdf", "glm", "optimize", "p.adjust",
             "pnorm", "rnorm", "shapiro.test", "uniroot")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/TSdbi.Rcheck/00install.out' for details.
Installation failed.
See  for details.
Installation failed.
See  for details.
* DONE

Check process probably crashed or hung up for 20 minutes ... killed
Most likely this happened in the example checks (?),
if not, ignore the following last lines of example output:

======== End of example output (where/before crash/hang up occured ?) ========
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/TSfame.Rcheck/00install.out' for details.
*
Installation failed.
See  for details.
Func.SAX: no visible global function definition for 'sd'
Func.SAX: no visible global function definition for 'qnorm'
Func.matrix: no visible global function definition for 'qnorm'
Func.motif: no visible global function definition for 'sd'
Func.motif: no visible global function definition for 'na.omit'
Func.motif: no visible global function definition for 'combn'
Func.motif.multivariate: no visible global function definition for
  'txtProgressBar'
Func.motif.multivariate: no visible global function definition for
  'setTxtProgressBar'
Undefined global functions or variables:
  combn na.omit qnorm sd setTxtProgressBar txtProgressBar
Consider adding
  importFrom("stats", "na.omit", "qnorm", "sd")
  importFrom("utils", "combn", "setTxtProgressBar", "txtProgressBar")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/TSmisc.Rcheck/00install.out' for details.
*
Malformed Description field: should contain one or more complete sentences.
dLag : dlag.f: no visible global function definition for
  'complete.cases'
distmat: no visible global function definition for 'dist'
fitCity: no visible global function definition for 'glm.control'
fitCity: no visible global function definition for 'terms'
ldmvnorm: no visible global function definition for 'mahalanobis'
lspline: no visible global function definition for 'quantile'
plot.tsdecomp: no visible global function definition for 'par'
plot.tsdecomp: no visible global function definition for 'plot'
setupFormula: no visible global function definition for 'as.formula'
spatialgibbs: no visible global function definition for 'rnorm'
spatialgibbs: no visible global function definition for 'rgamma'
spatialgibbs: no visible global function definition for 'runif'
tsdecomp: no visible global function definition for 'fft'
Undefined global functions or variables:
  as.formula complete.cases dist fft glm.control mahalanobis par plot
  quantile rgamma rnorm runif terms
Consider adding
  importFrom("graphics", "par", "plot")
  importFrom("stats", "as.formula", "complete.cases", "dist", "fft",
             "glm.control", "mahalanobis", "quantile", "rgamma", "rnorm",
             "runif", "terms")
to your NAMESPACE file.
installed size is  7.7Mb
  sub-directories of 1Mb or more:
    data   4.6Mb
    libs   1.8Mb
GNU make is a SystemRequirements.
Malformed Title field: should not end in a period.
covTranspose11: warning in glasso(sc, 2 * rhoc/n, wi.init = gc$wi,
  w.init = gc$w, maxit = maxit.glasso, thr = thr.glasso, penalize.diag
  = pen.diag): partial argument match of 'penalize.diag' to
  'penalize.diagonal'
covTranspose11: warning in glasso(sr, 2 * rhor/p, wi.init = gr$wi,
  w.init = gr$w, maxit = maxit.glasso, thr = thr.glasso, penalize.diag
  = pen.diag): partial argument match of 'penalize.diag' to
  'penalize.diagonal'
.help.ESS: no visible global function definition for 'index.search'
TransSphere : ttin: no visible global function definition for 't.test'
TransSphere: no visible global function definition for 'sd'
TransSphere: no visible global function definition for 'quantile'
TransSphere: no visible global function definition for 'pt'
Undefined global functions or variables:
  index.search pt quantile sd t.test
Consider adding
  importFrom("stats", "pt", "quantile", "sd", "t.test")
to your NAMESPACE file.
Installation failed.
See  for details.
plotarimapred: no visible global function definition for 'plot'
Undefined global functions or variables:
  plot
Consider adding
  importFrom("graphics", "plot")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/TSSQLite.Rcheck/00install.out'* DONE
Installation failed.
See  for details.
Found the following Makefile(s) with an include directive with a pathname using R_HOME:
  src/Makefile.win
Even though not recommended, variable R_HOME may contain spaces.
Makefile directives use space as a separator and there is no portable
way to quote/escape the space in Make rules and directives.  However,
one can and should quote pathnames when passed from Makefile to the
shell, and this can be done specifically when invoking Make recursively.
It is therefore recommended to use the Make '-f' option to include files
in directories specified using R_HOME.  This option can be specified
multiple times to include multiple Makefiles.  Note that 'Makeconf' is
included automatically into top-level makefile of a package.
More information can be found in 'Writing R Extensions'.
TT.GS : TT.GS.sp: no visible global function definition for 'qt'
TT.GS : TT.GS.sp: no visible global function definition for 'runif'
TT.GS : TT.GS.sp: no visible global function definition for 'pt'
TT.moment: no visible global function definition for 'dt'
TT.moment: no visible global function definition for 'pt'
Undefined global functions or variables:
  dt pt qt runif
Consider adding
  importFrom("stats", "dt", "pt", "qt", "runif")
to your NAMESPACE file.
Installation failed.
See  for details.
.saveDevice: no visible global function definition for 'dev.off'
Undefined global functions or variables:
  dev.off
Consider adding
  importFrom("grDevices", "dev.off")
to your NAMESPACE file.
Malformed Title field: should not end in a period.
ttwa: no visible global function definition for 'aggregate'
ttwa: no visible global function definition for 'txtProgressBar'
ttwa: no visible global function definition for 'setTxtProgressBar'
Undefined global functions or variables:
  aggregate setTxtProgressBar txtProgressBar
Consider adding
  importFrom("stats", "aggregate")
  importFrom("utils", "setTxtProgressBar", "txtProgressBar")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/TULIP.Rcheck/00install.out'
Installation failed.
See *
turf: no visible global function definition for 'read.table'
turf: no visible global function definition for 'flush.console'
turf.combos: no visible global function definition for 'combn'
Undefined global functions or variables:
  combn flush.console read.table
Consider adding
  importFrom("utils", "combn", "flush.console", "read.table")
to your NAMESPACE file.
Installation failed.
See  for details.
Package in Depends field not imported from: 'tcltk'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
TwoCop: no visible global function definition for 'quantile'
Undefined global functions or variables:
  quantile
Consider adding
  importFrom("stats", "quantile")
to your NAMESPACE file.
Package which this enhances but not available for checking: 'sl3'
check_arg: no visible global function definition for 'deparse1'
check_output: no visible global function definition for 'deparse1'
declare: no visible global function definition for 'deparse1'
get_assertion: no visible global function definition for
  'activeBindingFunction'
print.typed: no visible global function definition for 'deparse1'
process_assertion_factory_dots: no visible global function definition
  for 'deparse1'
Undefined global functions or variables:
  activeBindingFunction deparse1
Running examples in 'typed-Ex.R' failed
The error most likely occurred in:

> ### Name: ?
> ### Title: Set Variable Types, Argument Types and Return Types.
> ### Aliases: ? declare
> 
> ### ** Examples
> 
> Integer() ? function (x= ? Integer()) {
+   Integer() ? y <- 2L
+   res <- x + y
+   res
+ }
# typed function
function (x) 
{
    check_arg(x, Integer())
    declare("y", Integer(), value = 2L)
    res <- x + y
    check_output(res, Integer())
}
Error in deparse1(attr(x, "return_type")) : 
  could not find function "deparse1"
Calls: <Anonymous> -> print.typed -> writeLines -> paste0
Execution halted
Running 'testthat.R' [5s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(typed)
  
  Attaching package: 'typed'
  
  The following object is masked from 'package:utils':
  
      ?
  
  > 
  > test_check("typed")
  # typed function
  function () 
  {
  }
  <environment: 0x0000000011198748>
  # typed function
  function (x) 
  {
      check_output(check_arg(x, Double()), Double())
  }
  <environment: 0x0000000011198748>
  == Failed tests ================================================================
  -- Error (test-others.R:12:3): as_assertion_factory works ----------------------
  Error: could not find function "deparse1"
  Backtrace:
      x
   1. +-testthat::expect_equal(Numeric(~. == 1)(1), 1) test-others.R:12:2
   2. | \-testthat::quasi_label(enquo(object), label, arg = "object")
   3. |   \-rlang::eval_bare(expr, quo_get_env(quo))
   4. \-typed:::Numeric(~. == 1)
   5.   \-typed::process_assertion_factory_dots(...)
  -- Error (test-others.R:29:3): printing works ----------------------------------
  Error: could not find function "deparse1"
  Backtrace:
      x
   1. +-testthat::expect_equal(print(fun2), fun2) test-others.R:29:2
   2. | \-testthat::quasi_label(enquo(object), label, arg = "object")
   3. |   \-rlang::eval_bare(expr, quo_get_env(quo))
   4. +-base::print(fun2)
   5. \-typed:::print.typed(fun2)
   6.   +-base::writeLines(...)
   7.   \-base::paste0("# Return type: ", deparse1(attr(x, "return_type")))
  -- Error (test-qm.R:8:3): question mark works ----------------------------------
  Error: invalid (NULL) left side of assignment
  Backtrace:
      x
   1. \-testthat::expect_equal((`?`(Double(), x) = 1), 1) test-qm.R:8:2
   2.   \-testthat::quasi_label(enquo(object), label, arg = "object")
   3.     \-rlang::eval_bare(expr, quo_get_env(quo))
  
  [ FAIL 3 | WARN 0 | SKIP 0 | PASS 172 ]
  Error: Test failures
  Execution halted
Crm: no visible global function definition for 'integrate'
Crm : <anonymous>: no visible global function definition for
  'integrate'
Crm: no visible global function definition for 'optimize'
ail1: no visible global function definition for 'uniroot'
ail2 : fu : <anonymous>: no visible global function definition for
  'integrate'
ail2: no visible global function definition for 'uniroot'
aip : fu : <anonymous>: no visible global function definition for
  'integrate'
aip: no visible global function definition for 'uniroot'
ait1: no visible global function definition for 'uniroot'
ait2 : fu : <anonymous>: no visible global function definition for
  'integrate'
ait2: no visible global function definition for 'uniroot'
sim3p3: no visible global function definition for 'rbinom'
simCrm: no visible global function definition for 'rbinom'
simCrm: no visible global function definition for 'palette'
simCrm: no visible global function definition for 'gray'
simCrm: no visible global function definition for 'plot'
simCrm: no visible global function definition for 'abline'
simCrm: no visible global function definition for 'lines'
ssim3p3: no visible global function definition for 'txtProgressBar'
ssim3p3: no visible global function definition for 'setTxtProgressBar'
ssimCrm: no visible global function definition for 'txtProgressBar'
ssimCrm: no visible global function definition for 'setTxtProgressBar'
Undefined global functions or variables:
  abline gray integrate lines optimize palette plot rbinom
  setTxtProgressBar txtProgressBar uniroot
Consider adding
  importFrom("grDevices", "gray", "palette")
  importFrom("graphics", "abline", "lines", "plot")
  importFrom("stats", "integrate", "optimize", "rbinom", "uniroot")
  importFrom("utils", "setTxtProgressBar", "txtProgressBar")
to your NAMESPACE file.
installed size is  9.8Mb
  sub-directories of 1Mb or more:
    doc     6.6Mb
    ubinc   2.2Mb
installed size is  7.6Mb
  sub-directories of 1Mb or more:
    R      1.3Mb
    libs   5.7Mb
GNU make is a SystemRequirements.
Running 'testthat.R' [44s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(ubms)
  Loading required package: unmarked
  Loading required package: lattice
  
  Attaching package: 'ubms'
  
  The following objects are masked from 'package:unmarked':
  
      fitList, projected
  
  > test_check("ubms")
  Error in x$.self$finalize() : attempt to apply non-function
  == Skipped tests ===============================================================
  * On CRAN (7)
  
  == Failed tests ================================================================
  -- Failure (test_occu.R:70:3): stan_occu handles NA values ---------------------
  coef(fit)/10 not equivalent to coef(fit_na)/10.
  2/4 mismatches (average diff: 0.351)
  [1]  1.187 -  0.786 ==  0.401
  [2] -0.484 - -0.182 == -0.301
  -- Failure (test_occu.R:76:3): ubmsFitOccu gof method works --------------------
  between(g@estimate, 25, 35) is not TRUE
  
  `actual`:   FALSE
  `expected`: TRUE 
  
  [ FAIL 2 | WARN 0 | SKIP 7 | PASS 487 ]
  Error: Test failures
  Execution halted
rmd2pdf: no visible global function definition for 'tail'
rnw2pdf: no visible global function definition for 'tail'
Undefined global functions or variables:
  tail
Consider adding
  importFrom("utils", "tail")
to your NAMESPACE file.
GNU make is a SystemRequirements.
plot.UComp: no visible global function definition for 'plot'
Undefined global functions or variables:
  plot
Consider adding
  importFrom("graphics", "plot")
to your NAMESPACE file.
installed size is 13.3Mb
  sub-directories of 1Mb or more:
    doc         5.8Mb
    dummydata   1.4Mb
    libs        4.5Mb
installed size is 82.3Mb
  sub-directories of 1Mb or more:
    data      2.0Mb
    extdata   2.3Mb
    gdal      3.8Mb
    libs     68.9Mb
    proj      5.0Mb
installed size is  5.4Mb
  sub-directories of 1Mb or more:
    help   4.0Mb
ubRacing : predCandidate: no visible global function definition for
  'predict'
ubRacing : aux2.friedman.edit: no visible global function definition
  for 'pchisq'
ubRacing : aux2.friedman.edit: no visible global function definition
  for 'qt'
ubRacing : aux.friedman.edit: no visible global function definition for
  'wilcox.test'
ubRacing : aux.ttest.edit: no visible global function definition for
  't.test'
ubRacing : aux.ttest.edit: no visible global function definition for
  'p.adjust'
ubRacing : idFolds: no visible global function definition for
  'quantile'
ubRacing: no visible binding for global variable 'sd'
ubSmoteExs: no visible global function definition for 'runif'
Undefined global functions or variables:
  p.adjust pchisq predict qt quantile runif sd t.test wilcox.test
Consider adding
  importFrom("stats", "p.adjust", "pchisq", "predict", "qt", "quantile",
             "runif", "sd", "t.test", "wilcox.test")
to your NAMESPACE file.
med: no visible global function definition for 'quantile'
uh: no visible global function definition for 'mad'
uh.bu: no visible global function definition for 'mad'
Undefined global functions or variables:
  mad quantile
Consider adding
  importFrom("stats", "mad", "quantile")
to your NAMESPACE file.
plot.pclm: no visible global function definition for 'plot'
Undefined global functions or variables:
  plot
Consider adding
  importFrom("graphics", "plot")
to your NAMESPACE file.
dudewicz.unif.test: no visible global function definition for 'runif'
frosini.unif.test: no visible global function definition for 'runif'
hegazy.unif.test: no visible global function definition for 'runif'
kolmogorov.unif.test: no visible global function definition for 'runif'
kuiper.unif.test: no visible global function definition for 'runif'
neyman.unif.test: no visible global function definition for 'runif'
quesenberry.unif.test: no visible global function definition for
  'runif'
sarkadi.unif.test: no visible global function definition for 'runif'
sherman.unif.test: no visible global function definition for 'runif'
Undefined global functions or variables:
  runif
Consider adding
  importFrom("stats", "runif")
to your NAMESPACE file.
cumcount: no visible global function definition for 'setNames'
uniqtag: no visible global function definition for 'setNames'
Undefined global functions or variables:
  setNames
Consider adding
  importFrom("stats", "setNames")
to your NAMESPACE file.
installed size is  6.7Mb
  sub-directories of 1Mb or more:
    R      1.3Mb
    doc    1.6Mb
    libs   2.6Mb
GNU make is a SystemRequirements.
Malformed Description field: should contain one or more complete sentences.
Installation failed.
See  for details.
installed size is  8.1Mb
  sub-directories of 1Mb or more:
    doc   7.6Mb
.geomap: no visible global function definition for 'list2DF'
Undefined global functions or variables:
  list2DF
Package suggested but not available for checking: 'USAboundariesData'
Installation failed.
See  for details.
installed size is 12.7Mb
  sub-directories of 1Mb or more:
    data  12.2Mb
NB: .First.lib is obsolete and will not be used in R >= 3.0.0
File 'UScensus2000cdp/R/zzz.R':
  .First.lib calls:
    cat(paste("'", ehelp[4], "'\n", "Version ", ehelp[2], " created on ",     ehelp[3], ".\n", sep = ""))
    cat(paste(substring(ehelp[3], first = 16), "\n", "Version ",     substring(ehelp[4], first = 16), " created on ", substring(ehelp[5],         first = 16), ".\n", sep = ""))
    cat(paste("copyright (c) 2009, Zack W. Almquist, University of California-Irvine\n",     sep = ""))
    cat("For citation information, type citation(\"UScensus2000cdp\").\n")
    cat("Type help(package=\"UScensus2000cdp\") to get started.\n")

Package startup functions should use 'packageStartupMessage' to
  generate messages.
See section 'Good practice' in '?.onAttach'.
installed size is 27.0Mb
  sub-directories of 1Mb or more:
    data  26.4Mb
NB: .First.lib is obsolete and will not be used in R >= 3.0.0
File 'UScensus2000tract/R/zzz.R':
  .First.lib calls:
    cat(paste("'", ehelp[4], "'\n", "Version ", ehelp[2], " created on ",     ehelp[3], ".\n", sep = ""))
    cat(paste(substring(ehelp[3], first = 16), "\n", "Version ",     substring(ehelp[4], first = 16), " created on ", substring(ehelp[5],         first = 16), ".\n", sep = ""))
    cat(paste("copyright (c) 2009, Zack W. Almquist, University of California-Irvine\n",     sep = ""))
    cat("For citation information, type citation(\"UScensus2000tract\").\n")
    cat("Type help(package=\"UScensus2000tract\") to get started.\n")

Package startup functions should use 'packageStartupMessage' to
  generate messages.
See section 'Good practice' in '?.onAttach'.
Found the following hidden files and directories:
  data/.Rhistory
installed size is  8.3Mb
  sub-directories of 1Mb or more:
    doc       1.6Mb
    extdata   6.4Mb
Malformed Title field: should not end in a period.
histw: no visible global function definition for 'plot.new'
histw: no visible global function definition for 'plot.window'
histw: no visible global function definition for 'axis'
histw: no visible global function definition for 'rect'
histw: no visible global function definition for 'lines'
uwham.boot: no visible binding for global variable 'var'
Undefined global functions or variables:
  axis lines plot.new plot.window rect var
Consider adding
  importFrom("graphics", "axis", "lines", "plot.new", "plot.window",
             "rect")
  importFrom("stats", "var")
to your NAMESPACE file.
installed size is 25.5Mb
  sub-directories of 1Mb or more:
    doc    2.1Mb
    libs  23.3Mb
Packages suggested but not available for checking: 'vaers', 'vaersND'
Packages suggested but not available for checking: 'vaers', 'vaersND'
installed size is  9.4Mb
  sub-directories of 1Mb or more:
    extdata   8.7Mb
Found the following significant warnings:
  Note: possible error in 'bquote(dplyr::transmute(x$query, ': unused argument (splice = TRUE) 
  Note: possible error in 'bquote(dplyr::transmute(tbl, ': unused argument (splice = TRUE) 
  Note: possible error in 'bquote({': unused argument (splice = TRUE) 
See 'd:/Rcompile/CRANpkg/local/3.6/validatedb.Rcheck/00install.out' for details.
Information on the location(s) of code generating the 'Note's can be
obtained by re-running with environment variable R_KEEP_PKG_SOURCE set
to 'yes'.
aggregate_by_record: possible error in bquote(dplyr::transmute(x$query,
  ..(key_expr), nfails = .(fails), nNA = .(nas)), splice = TRUE):
  unused argument (splice = TRUE)
confront_tbl: possible error in bquote(dplyr::transmute(tbl,
  ..(key_expr), ..(exprs[working])), splice = TRUE): unused argument
  (splice = TRUE)
confront_tbl_sparse : <anonymous>: possible error in bquote({: unused
  argument (splice = TRUE)
confront_tbl_sparse : <anonymous>: possible error in d <-
  dplyr::transmute(tbl, ..(key_expr), rule = .(rule_name), fail =
  !.(e)): unused argument (splice = TRUE)
confront_tbl_sparse : <anonymous>: possible error in dplyr::filter(d,
  dplyr::coalesce(fail, TRUE)): unused argument (splice = TRUE)
confront_tbl_sparse : <anonymous>: possible error in }, splice = TRUE):
  unused argument (splice = TRUE)
Running examples in 'validatedb-Ex.R' failed
The error most likely occurred in:

> ### Name: aggregate.tbl_validation
> ### Title: Count the number of invalid rules or records.
> ### Aliases: aggregate.tbl_validation
> 
> ### ** Examples
> 
> income <- data.frame(id = 1:2, age=c(12,35), salary = c(1000,NA))
> con <- dbplyr::src_memdb()
> tbl_income <- dplyr::copy_to(con, income, overwrite=TRUE)
> print(tbl_income)
# Source:   table<income> [?? x 3]
# Database: sqlite 3.35.5 [:memory:]
     id   age salary
  <int> <dbl>  <dbl>
1     1    12   1000
2     2    35     NA
> 
> # Let's define a rule set and confront the table with it:
> rules <- validator( is_adult   = age >= 18
+                     , has_income = salary > 0
+ )
> 
> # and confront!
> # in general with a db table it is handy to use a key
> cf <- confront(tbl_income, rules, key="id")
Error in bquote({ : unused argument (splice = TRUE)
Calls: confront ... rule_works_on_tbl -> confront_tbl_sparse -> lapply -> FUN
Execution halted
Installation failed.
See  for details.
installed size is 89.6Mb
  sub-directories of 1Mb or more:
    extdata   1.0Mb
    gdal      2.0Mb
    libs     80.0Mb
    proj      6.0Mb
Malformed Description field: should contain one or more complete sentences.
Mammen: no visible global function definition for 'runif'
PR2: no visible global function definition for 'ar.burg'
PR2: no visible global function definition for 'pt'
PR2: no visible global function definition for 'pf'
PR3: no visible global function definition for 'ar.burg'
PR3: no visible global function definition for 'pt'
PR3: no visible global function definition for 'pf'
VAR.FOR: no visible global function definition for 'qnorm'
VAR.ForeB: no visible global function definition for 'runif'
VAR.LRtest: no visible global function definition for 'pchisq'
VAR.LRtest: no visible global function definition for 'pf'
VAR.PI: no visible global function definition for 'quantile'
VAR.Waldtest: no visible global function definition for 'pf'
VAR.irf: no visible global function definition for 'par'
VAR.irf: no visible global function definition for 'plot'
VAR.irf: no visible global function definition for 'abline'
VAR1.sim: no visible global function definition for 'rnorm'
resamp: no visible global function definition for 'runif'
Undefined global functions or variables:
  abline ar.burg par pchisq pf plot pt qnorm quantile rnorm runif
Consider adding
  importFrom("graphics", "abline", "par", "plot")
  importFrom("stats", "ar.burg", "pchisq", "pf", "pt", "qnorm",
             "quantile", "rnorm", "runif")
to your NAMESPACE file.
Installation failed.
See  for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/VARsignR.Rcheck/00install.out'* DONE
black_scholes: no visible global function definition for 'pnorm'
Undefined global functions or variables:
  pnorm
Consider adding
  importFrom("stats", "pnorm")
to your NAMESPACE file.
burdenPlot: no visible global function definition for 'density'
burdenPlot: no visible global function definition for 'axis'
burdenPlot: no visible global function definition for 'points'
burdenPlot: no visible global function definition for 'lines'
burdenPlot: no visible global function definition for 'abline'
burdenPlot: no visible global function definition for 'text'
burdenPlot: no visible global function definition for 'sd'
burdenPlot: no visible global function definition for 'segments'
vbdm: no visible global function definition for 'var'
vbdm: no visible global function definition for 'pchisq'
vbdmR : run_discrete_mixture_vanilla: no visible global function
  definition for 'var'
vbdmR: no visible global function definition for 'pchisq'
Undefined global functions or variables:
  abline axis density lines pchisq points sd segments text var
Consider adding
  importFrom("graphics", "abline", "axis", "lines", "points", "segments",
             "text")
  importFrom("stats", "density", "pchisq", "sd", "var")
to your NAMESPACE file.
compute_KL : rtnorm: no visible global function definition for 'runif'
compute_KL : rtnorm: no visible global function definition for 'dnorm'
compute_KL: no visible global function definition for 'qnorm'
compute_KL: no visible global function definition for 'dnorm'
compute_KL: no visible global function definition for 'pnorm'
compute_KL: no visible global function definition for 'var'
compute_KL: no visible global function definition for 'rbinom'
compute_KL: no visible global function definition for 'rnorm'
compute_KL: no visible global function definition for 'sd'
vbsr: no visible global function definition for 'qchisq'
vbsr: no visible global function definition for 'var'
vbsr: no visible global function definition for 'pchisq'
vbsr: no visible global function definition for 'sd'
vbsr: no visible binding for global variable 'sd'
Undefined global functions or variables:
  dnorm pchisq pnorm qchisq qnorm rbinom rnorm runif sd var
Consider adding
  importFrom("stats", "dnorm", "pchisq", "pnorm", "qchisq", "qnorm",
             "rbinom", "rnorm", "runif", "sd", "var")
to your NAMESPACE file.
GetTestPlot.Boot: no visible global function definition for 'plot'
GetTestPlot.Vuong: no visible global function definition for 'plot'
VC_MOSUM_Boot: no visible global function definition for 'plot'
VC_MOSUM_Vuong: no visible global function definition for 'plot'
Undefined global functions or variables:
  plot
Consider adding
  importFrom("graphics", "plot")
to your NAMESPACE file.
installed size is  6.2Mb
  sub-directories of 1Mb or more:
    doc    4.1Mb
    libs   1.1Mb
Compare2FDS: no visible global function definition for 'runif'
Compare2FDS: no visible global function definition for 'lm'
Compare2FDS: no visible global function definition for 'model.matrix'
Compare2FDS: no visible global function definition for 'plot'
Compare2FDS: no visible global function definition for 'abline'
Compare2FDS: no visible global function definition for 'lines'
Compare2FDS: no visible global function definition for 'text'
Compare2Vdg: no visible global function definition for 'par'
Compare2Vdg: no visible global function definition for 'plot'
Compare2Vdg: no visible global function definition for 'lines'
Compare2Vdg: no visible global function definition for 'legend'
FDSPlot: no visible global function definition for 'runif'
FDSPlot: no visible global function definition for 'lm'
FDSPlot: no visible global function definition for 'model.matrix'
FDSPlot: no visible global function definition for 'plot'
FDSPlot: no visible global function definition for 'abline'
Vdgraph: no visible global function definition for 'par'
Vdgraph: no visible global function definition for 'plot'
Vdgraph: no visible global function definition for 'lines'
Vdgraph: no visible global function definition for 'legend'
Undefined global functions or variables:
  abline legend lines lm model.matrix par plot runif text
Consider adding
  importFrom("graphics", "abline", "legend", "lines", "par", "plot",
             "text")
  importFrom("stats", "lm", "model.matrix", "runif")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/VdgRsm.Rcheck/00install.out' for details.
calculateParameters,AffineTransformation: no visible global function
  definition for 'lm'
calculateParameters,AffineTransformation: no visible global function
  definition for 'coef'
calculateParameters,SimilarityTransformation: no visible global
  function definition for 'lm'
calculateParameters,SimilarityTransformation: no visible global
  function definition for 'coef'
plotGridTransformation,Cartesian2DCoordinateTransformation: no visible
  global function definition for 'points'
plotGridTransformation,Cartesian2DCoordinateTransformation: no visible
  global function definition for 'legend'
Undefined global functions or variables:
  coef legend lm points
Consider adding
  importFrom("graphics", "legend", "points")
  importFrom("stats", "coef", "lm")
to your NAMESPACE file.
Installation failed.
See * DONE
Running examples in 'vegalite-Ex.R' failed
The error most likely occurred in:

> ### Name: from_spec
> ### Title: Take a JSON Vega-Lite Spec and render as an htmlwidget
> ### Aliases: from_spec
> 
> ### ** Examples
> 
> from_spec("http://rud.is/dl/embedded.json")
Warning in file(con, "r") :
  InternetOpenUrl failed: 'Die Serververbindung wurde zurückgesetzt.'
Error in file(con, "r") : cannot open the connection
Calls: from_spec -> readLines -> file
Execution halted
Running examples in 'vegawidget-Ex.R' failed
The error most likely occurred in:

> ### Name: vw_set_base_url
> ### Title: Set base URL
> ### Aliases: vw_set_base_url
> 
> ### ** Examples
> 
>  # this is the URL used for Vega datasets
>  previous <- vw_set_base_url("https://cdn.jsdelivr.net/npm/vega-datasets@2")
> 
>  # reset to previous value
>  vw_set_base_url(previous)
Error in vega_embed_local[["loader"]][["baseURL"]] <- url : 
  replacement has length zero
Calls: vw_set_base_url
Execution halted
Running 'testthat.R' [5s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(vegawidget)
  > 
  > test_check("vegawidget")
  
  Attaching package: 'rlang'
  
  The following objects are masked from 'package:testthat':
  
      is_false, is_null, is_true
  
  == Skipped tests ===============================================================
  * On CRAN (7)
  
  == Failed tests ================================================================
  -- Error (test-set-base-url.R:18:3): vw_set_base_url() works -------------------
  Error: replacement has length zero
  Backtrace:
      x
   1. \-vegawidget::vw_set_base_url(NULL) test-set-base-url.R:18:2
  
  [ FAIL 1 | WARN 0 | SKIP 7 | PASS 71 ]
  Error: Test failures
  Execution halted
installed size is  6.0Mb
  sub-directories of 1Mb or more:
    R   3.6Mb
Malformed Description field: should contain one or more complete sentences.
Checking should be performed on sources prepared by 'R CMD build'.
plot.VennDiagram : <anonymous>: no visible global function definition
  for 'hcl'
plot.VennDiagram: no visible global function definition for 'plot.new'
plot.VennDiagram: no visible global function definition for
  'plot.window'
plot.VennDiagram: no visible global function definition for 'col2rgb'
plot.VennDiagram: no visible global function definition for 'rgb'
plot.VennDiagram: no visible global function definition for 'polygon'
plot.VennDiagram: no visible global function definition for 'text'
plot.VennDiagram: no visible global function definition for 'title'
Undefined global functions or variables:
  col2rgb hcl plot.new plot.window polygon rgb text title
Consider adding
  importFrom("grDevices", "col2rgb", "hcl", "rgb")
  importFrom("graphics", "plot.new", "plot.window", "polygon", "text",
             "title")
to your NAMESPACE file.
Installation failed.
See  for details.
Installation failed.
See  for details.
* DONE

Check process probably crashed or hung up for 20 minutes ... killed
Most likely this happened in the example checks (?),
if not, ignore the following last lines of example output:

======== End of example output (where/before crash/hang up occured ?) ========
installed size is  7.7Mb
  sub-directories of 1Mb or more:
    R      3.9Mb
    help   2.8Mb
spikeplot: no visible global function definition for 'deparse1'
Undefined global functions or variables:
  deparse1
Missing link or links in documentation object 'spikeplot.Rd':
  '[base]{plot}'

See section 'Cross-references' in the 'Writing R Extensions' manual.
Found the following significant warnings:
  Warning: namespace 'Rcpp' is not available and has been replaced
See 'd:/Rcompile/CRANpkg/local/3.6/vhcub.Rcheck/00install.out' for details.
Malformed Title field: should not end in a period.
vif: no visible global function definition for 'sd'
vif: no visible global function definition for 'lm'
vif: no visible global function definition for 'pnorm'
Undefined global functions or variables:
  lm pnorm sd
Consider adding
  importFrom("stats", "lm", "pnorm", "sd")
to your NAMESPACE file.
hyperpara: no visible binding for global variable 'var'
hyperpara: no visible global function definition for 'hist'
Undefined global functions or variables:
  hist var
Consider adding
  importFrom("graphics", "hist")
  importFrom("stats", "var")
to your NAMESPACE file.
installed size is  5.1Mb
  sub-directories of 1Mb or more:
    doc    2.2Mb
    libs   1.5Mb
installed size is  8.4Mb
  sub-directories of 1Mb or more:
    libs   8.1Mb
'library' or 'require' call to 'stats' in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
viopoints.default: no visible global function definition for 'par'
viopoints.default: no visible global function definition for 'plot.new'
viopoints.default: no visible global function definition for
  'plot.window'
viopoints.default: no visible global function definition for 'axis'
viopoints.default: no visible global function definition for 'arrows'
viopoints.default: no visible global function definition for
  'getFromNamespace'
viopoints.default: no visible global function definition for 'title'
viopoints.default: no visible global function definition for 'box'
Undefined global functions or variables:
  arrows axis box getFromNamespace par plot.new plot.window title
Consider adding
  importFrom("graphics", "arrows", "axis", "box", "par", "plot.new",
             "plot.window", "title")
  importFrom("utils", "getFromNamespace")
to your NAMESPACE file.
Installation failed.
See  for details.
GNU make is a SystemRequirements.
installed size is 11.0Mb
  sub-directories of 1Mb or more:
    doc           4.3Mb
    docjs         1.3Mb
    htmlwidgets   3.9Mb
installed size is  6.2Mb
  sub-directories of 1Mb or more:
    doc   5.9Mb
Decile.Plot: no visible global function definition for 'barplot'
Decile.Plot: no visible global function definition for 'axis'
Sliding.Window: no visible global function definition for 'plot'
Sliding.Window: no visible global function definition for 'lines'
Sliding.Window: no visible global function definition for 'legend'
Undefined global functions or variables:
  axis barplot legend lines plot
Consider adding
  importFrom("graphics", "axis", "barplot", "legend", "lines", "plot")
to your NAMESPACE file.
installed size is  5.9Mb
  sub-directories of 1Mb or more:
    libs   5.6Mb
Malformed Description field: should contain one or more complete sentences.
voss1d: no visible global function definition for 'approx'
voss1d: no visible global function definition for 'rnorm'
voss1g: no visible global function definition for 'dchisq'
voss1g: no visible global function definition for 'approx'
voss1g: no visible global function definition for 'rnorm'
voss2d: no visible global function definition for 'rnorm'
voss2g: no visible global function definition for 'dchisq'
voss2g: no visible global function definition for 'rnorm'
Undefined global functions or variables:
  approx dchisq rnorm
Consider adding
  importFrom("stats", "approx", "dchisq", "rnorm")
to your NAMESPACE file.
installed size is  9.2Mb
  sub-directories of 1Mb or more:
    extdata   8.4Mb
'library' or 'require' call to 'misc3d' in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Malformed Description field: should contain one or more complete sentences.
plot.vscc: no visible global function definition for 'rainbow'
plot.vscc: no visible global function definition for 'pairs'
Undefined global functions or variables:
  pairs rainbow
Consider adding
  importFrom("grDevices", "rainbow")
  importFrom("graphics", "pairs")
to your NAMESPACE file.
Installation failed.
See  for details.
Packages in Depends field not imported from:
  'lattice' 'latticeExtra' 'stringdist'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
ald: no visible global function definition for 'detectCores'
ald: no visible global function definition for 'mclapply'
coltheart.N: no visible global function definition for 'detectCores'
coltheart.N: no visible global function definition for 'mclapply'
hamming.distance: no visible global function definition for
  'stringdist'
ldknn: no visible global function definition for 'detectCores'
ldknn: no visible global function definition for 'mclapply'
ldknn.odds: no visible global function definition for 'glm'
ldknn.odds: no visible binding for global variable 'binomial'
ldknn.odds: no visible global function definition for 'coefficients'
levenshtein.damerau.distance: no visible global function definition for
  'stringdist'
levenshtein.distance: no visible global function definition for
  'stringdist'
plot.ldknn.run: no visible global function definition for 'histogram'
plot.ldknn.run: no visible global function definition for
  'theEconomist.theme'
plot.ldknn.run: no visible global function definition for 'xyplot'
plot.ldknn.run: no visible global function definition for 'as.layer'
Undefined global functions or variables:
  as.layer binomial coefficients detectCores glm histogram mclapply
  stringdist theEconomist.theme xyplot
Consider adding
  importFrom("stats", "binomial", "coefficients", "glm")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/W2CWM2C.Rcheck/00install.out' for details.
*
Installation failed.
See  for details.
Installation failed.
See  for details.
summary.whc: no visible global function definition for 'printCoefmat'
wahc.fit: no visible global function definition for 'pt'
wahc.fit: no visible global function definition for 'cor'
whc: no visible global function definition for 'model.frame'
whc: no visible global function definition for 'model.matrix'
whc: no visible global function definition for 'model.response'
Undefined global functions or variables:
  cor model.frame model.matrix model.response printCoefmat pt
Consider adding
  importFrom("stats", "cor", "model.frame", "model.matrix",
             "model.response", "printCoefmat", "pt")
to your NAMESPACE file.
installed size is  9.1Mb
  sub-directories of 1Mb or more:
    libs   7.8Mb
Rd conversion errors:
Warning in close.connection(con) :
  Problem closing connection:  No space left on device
Warning in file(out, "wt") :
  cannot open file 'D:\temp\RtmpUBON98\ltxb2f02755608f/fitted.walker_fit.tex': No space left on device
Error in file(out, "wt") : cannot open the connection
*
installed size is  8.6Mb
  sub-directories of 1Mb or more:
    R      1.1Mb
    doc    5.5Mb
    libs   1.5Mb
Running examples in 'warbleR-Ex.R' failed
The error most likely occurred in:

> ### Name: spectrograms
> ### Title: Spectrograms of selected signals
> ### Aliases: spectrograms
> 
> ### ** Examples
> 
> { 
+ # load and save data
+ data(list = c("Phae.long1", "Phae.long2","lbh_selec_table"))
+ writeWave(Phae.long1, file.path(tempdir(), "Phae.long1.wav")) #save sound files
+ writeWave(Phae.long2, file.path(tempdir(), "Phae.long2.wav"))
+ 
+ # make spectrograms
+ spectrograms(X = lbh_selec_table, flim = c(0, 11), res = 300, mar = 0.05, 
+ wl = 300, path = tempdir())
+  
+ # check this folder
+ tempdir()
+ }
Warning in writeBin(x, ...) : problem writing to connection

  |                                                  | 0 % ~calculating  
Execution halted
Rd conversion errors:
Error in writeLines(x, con, useBytes = TRUE, ...) : 
  Error writing to connection:  No space left on device
Package required and available but unsuitable version: 'XML'

See section 'The DESCRIPTION file' in the 'Writing R Extensions'
manual.
Installation failed.
See  for details.
Installation failed.
See  for details.
* DONE

Check process probably crashed or hung up for 20 minutes ... killed
Most likely this happened in the example checks (?),
if not, ignore the following last lines of example output:

======== End of example output (where/before crash/hang up occured ?) ========
Installation failed.
See  for details.
* 
Check process probably crashed or hung up for 20 minutes ... killed
Most likely this happened in the example checks (?),
if not, ignore the following last lines of example output:

======== End of example output (where/before crash/hang up occured ?) ========
Installation failed.
See  for details.
* 
Check process probably crashed or hung up for 20 minutes ... killed
Most likely this happened in the example checks (?),
if not, ignore the following last lines of example output:

======== End of example output (where/before crash/hang up occured ?) ========
plot_local.multiple.cross.correlation: no visible global function
  definition for 'plot'
plot_wave.local.multiple.cross.correlation : blocki: no visible global
  function definition for 'plot'
Undefined global functions or variables:
  plot
Consider adding
  importFrom("graphics", "plot")
to your NAMESPACE file.
Installation failed.
See  for details.
Error(s) in re-building vignettes:
--- re-building 'examples.Rmd' using rmarkdown
Loading required package: lattice

Attaching package: 'latticeExtra'

The following object is masked from 'package:ggplot2':

    layer

Warning in gzfile(file, "wb") :
  cannot open compressed file 'examples_cache/latex/VL-algorithm_0c9cf8f9d2c357f705e973ea654eb4bb.RData', probable reason 'No space left on device'
Quitting from lines 520-521 (examples.Rmd) 
Error: processing vignette 'examples.Rmd' failed with diagnostics:
cannot open the connection
--- failed re-building 'examples.Rmd'

SUMMARY: processing the following file failed:
  'examples.Rmd'

Error: Vignette re-building failed.
Execution halted
Rd conversion errors:
Warning in close.connection(con) :
  Problem closing connection:  No space left on device
Warning in close.connection(con) :
  Problem closing connection:  No space left on device
Warning in file(out, "wt") :
  cannot open file 'D:\temp\RtmpOWVKpw\ltx18d94240733b5/deltaV.tex': No space left on device
Error in file(out, "wt") : cannot open the connection
Installation failed.
See  for details.
Error(s) in re-building vignettes:
--- re-building 'wCorrArguments.Rmd' using rmarkdown
Loading required package: knitr
Loading required package: wCorr
wCorr v1.9.1

Loading required package: lattice
Loading required package: captioner
! Package pdftex.def Error: File `d:/RCompile/CRANpkg/local/3.6/wCorr.Rcheck/vi
gn_test/wCorr/vignettes/wCorrArguments_files/figure-latex/ML\%20RMSE\%20plot-1.
pdf' not found.

Error: processing vignette 'wCorrArguments.Rmd' failed with diagnostics:
LaTeX failed to compile d:/RCompile/CRANpkg/local/3.6/wCorr.Rcheck/vign_test/wCorr/vignettes/wCorrArguments.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See wCorrArguments.log for more info.
--- failed re-building 'wCorrArguments.Rmd'

--- re-building 'wCorrFormulas.Rmd' using rmarkdown
Loading required package: wCorr
wCorr v1.9.1

Loading required package: lattice
Loading required package: captioner
! Package pdftex.def Error: File `d:/RCompile/CRANpkg/local/3.6/wCorr.Rcheck/vi
gn_test/wCorr/vignettes/wCorrFormulas_files/figure-latex/bias\%20Versus\%20rho-
1.pdf' not found.

Error: processing vignette 'wCorrFormulas.Rmd' failed with diagnostics:
LaTeX failed to compile d:/RCompile/CRANpkg/local/3.6/wCorr.Rcheck/vign_test/wCorr/vignettes/wCorrFormulas.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See wCorrFormulas.log for more info.
--- failed re-building 'wCorrFormulas.Rmd'

SUMMARY: processing the following files failed:
  'wCorrArguments.Rmd' 'wCorrFormulas.Rmd'

Error: Vignette re-building failed.
Execution halted
onesamplemeantest: no visible global function definition for 'pnorm'
twosamplemeantest: no visible global function definition for 'pnorm'
wcq: no visible global function definition for 'var'
wcq: no visible global function definition for 'pnorm'
wcq.fdrc: no visible global function definition for 'p.adjust'
Undefined global functions or variables:
  p.adjust pnorm var
Consider adding
  importFrom("stats", "p.adjust", "pnorm", "var")
to your NAMESPACE file.
installed size is 10.1Mb
  sub-directories of 1Mb or more:
    client   8.9Mb
    doc      1.0Mb
Error(s) in re-building vignettes:
--- re-building 'webglobe.Rmd' using rmarkdown
pandoc.exe: pandoc8a6c4b2f27cd.html: hClose: resource exhausted (No space left on device)
Error: processing vignette 'webglobe.Rmd' failed with diagnostics:
pandoc document conversion failed with error 1
--- failed re-building 'webglobe.Rmd'

SUMMARY: processing the following file failed:
  'webglobe.Rmd'

Error: Vignette re-building failed.
Execution halted
Rd conversion errors:
Error in writeLines(readLines(f), outcon) : Error writing to connection
Installation failed.
See  for details.
installed size is  9.3Mb
  sub-directories of 1Mb or more:
    libs   9.1Mb
GNU make is a SystemRequirements.
Warning in close.connection(con) :
  Problem closing connection:  No space left on device
Warning in close.connection(con) :
  Problem closing connection:  No space left on device
Warning in close.connection(con) :
  Problem closing connection:  No space left on device
Warning in close.connection(con) :
  Problem closing connection:  No space left on device
Warning in close.connection(con) :
  Problem closing connection:  No space left on device
Warning in close.connection(con) :
  Problem closing connection:  No space left on device
Warning in close.connection(con) :
  Problem closing connection:  No space left on device
Warning in close.connection(con) :
  Problem closing connection:  No space left on device
Warning in close.connection(con) :
  Problem closing connection:  No space left on device
Warning in file(out, "wt") :
  cannot open file 'D:\temp\Rtmpo7U4zd\file185003eac7f7/nelson_method.R': No space left on device
Error in file(out, "wt") : cannot open the connection
Execution halted
Running 'testthat.R' [1s]
Running 'testthat.R' [2s]
Rd conversion errors:
Warning in close.connection(con) :
  Problem closing connection:  No space left on device
Warning in close.connection(con) :
  Problem closing connection:  No space left on device
Warning in file(out, "wt") :
  cannot open file 'D:\temp\RtmpApc3gn\ltxb44ce5e3358/confint_betabinom.tex': No space left on device
Error in file(out, "wt") : cannot open the connection
Installation failed.
See  for details.
Weighted.Box.test: no visible global function definition for 'acf'
Weighted.Box.test: no visible binding for global variable 'na.pass'
Weighted.Box.test: no visible global function definition for 'pgamma'
Weighted.Box.test: no visible global function definition for 'pchisq'
Weighted.LM.test: no visible global function definition for 'acf'
Weighted.LM.test: no visible binding for global variable 'na.pass'
Weighted.LM.test: no visible global function definition for 'pgamma'
Undefined global functions or variables:
  acf na.pass pchisq pgamma
Consider adding
  importFrom("stats", "acf", "na.pass", "pchisq", "pgamma")
to your NAMESPACE file.
LaTeX errors when creating PDF version.
This typically indicates Rd problems.
LaTeX errors found:
!pdfTeX error: pdflatex.EXE: fflush() failed (No space left on device)
 ==> Fatal error occurred, no output PDF file produced!
Re-running with no redirection of stdout/stderr.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/WeightSVM.Rcheck/00install.out'* DONE
Running 'testthat.R' [3s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(welchADF)
  > 
  > test_check("welchADF")
  Error in parse(con, n = -1, srcfile = srcfile, encoding = "UTF-8") : 
    test-welchADF-test-dataframe.R:1:1: unexpected input
  1: _
      ^
  Calls: test_check ... doWithOneRestart -> force -> lapply -> FUN -> source_file -> parse
  Execution halted
Rd conversion errors:
Error in writeLines(x, con, useBytes = TRUE, ...) : 
  Error writing to connection:  No space left on device
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/wellknown.Rcheck/00install.out' for details.
Rd conversion errors:
Warning in file(out, "wt") :
  cannot open file 'D:\temp\RtmpGY8rND\ltx8df45337e5a/plotWdists.tex': No space left on device
Error in file(out, "wt") : cannot open the connection
Rd conversion errors:
Error in writeLines(x, con, useBytes = TRUE, ...) : 
  Error writing to connection:  No space left on device
BottomLeftOf.Rd: Sections \title, and \name must exist and be unique in Rd files
problem found in 'BottomLeftOf.Rd'
Rd conversion errors:
Warning in close.connection(con) :
  Problem closing connection:  No space left on device
Warning in file(out, "wt") :
  cannot open file 'D:\temp\RtmpAr8Woh\ltx98e816c16766/print.WLabel.tex': No space left on device
Error in file(out, "wt") : cannot open the connection
Running massageExamples to create 'whitechapelR-Ex.R' failed
Error in file(out, "wt") : cannot open the connection
Calls: <Anonymous> -> Rd2ex -> file
In addition: Warning messages:
1: In close.connection(con) :
  Problem closing connection:  No space left on device
2: In file(out, "wt") :
  cannot open file 'D:\temp\RtmpkFj1Ey\file14b6866317f54/show_board.R': No space left on device
Execution halted
 NONE
LaTeX errors when creating PDF version.
This typically indicates Rd problems.
LaTeX errors found:
!pdfTeX error: pdflatex.EXE: fflush() failed (No space left on device)
 ==> Fatal error occurred, no output PDF file produced!
Warning in file(out, "wt") :
  cannot open file 'D:\temp\RtmpgVroEZ\filea9bc418ca8/username.R': No space left on device
Error in file(out, "wt") : cannot open the connection
Execution halted
displayDataTable.Rd: Sections \title, and \name must exist and be unique in Rd files
getExampleData.Rd: Sections \title, and \name must exist and be unique in Rd files
problems found in 'displayDataTable.Rd', 'getExampleData.Rd'
Error(s) in re-building vignettes:
--- re-building 'Using_widgetframe.Rmd' using rmarkdown
--- finished re-building 'Using_widgetframe.Rmd'

Error in readRDS(ser_engine) : error reading from connection
Calls: <Anonymous> -> readRDS
Execution halted
SUMMARY: processing the following file failed:
  'widgetframe_and_knitr.Rmd'

Error: Vignette re-building failed.
Execution halted
Warning in file(out, "wt") :
  cannot open file 'D:\temp\RtmpCcIGP9\file14e104b4a1968/pairwise_delta.R': No space left on device
Error in file(out, "wt") : cannot open the connection
Execution halted
Running massageExamples to create 'widyr-Ex.R' failed
Error in file(out, "wt") : cannot open the connection
Calls: <Anonymous> -> Rd2ex -> file
In addition: Warning message:
In file(out, "wt") :
  cannot open file 'D:\temp\RtmpER7b7L\file57fc4fee7dc/pairwise_delta.R': No space left on device
Execution halted
 NONE
unable to create 'vign_test'
Malformed Description field: should contain one or more complete sentences.
Bundesliga.Mannschaft: no visible global function definition for 'data'
Bundesliga.Mannschaft: no visible binding for global variable
  'Bundesliga'
Bundesliga.Tabelle: no visible global function definition for 'data'
Bundesliga.Tabelle: no visible binding for global variable 'Bundesliga'
Bundesliga.XML: no visible global function definition for 'data'
Bundesliga.XML: no visible binding for global variable 'Bundesliga'
sens.spec: no visible global function definition for 'na.omit'
Undefined global functions or variables:
  Bundesliga data na.omit
Consider adding
  importFrom("stats", "na.omit")
  importFrom("utils", "data")
to your NAMESPACE file.
Installation failed.
See  for details.
wilcox.selection.split: no visible global function definition for
  'pnorm'
wilcox.test2: no visible global function definition for 'wilcox.test'
Undefined global functions or variables:
  pnorm wilcox.test
Consider adding
  importFrom("stats", "pnorm", "wilcox.test")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/winch.Rcheck/00install.out' for details.
installed size is  7.1Mb
  sub-directories of 1Mb or more:
    bn   7.0Mb
Installation failed.
See  for details.
Installation failed.
See * DONE
dbayes: no visible global function definition for 'mahalanobis'
dbayes: no visible global function definition for 'var'
wmd: no visible global function definition for 'cor'
wmd: no visible global function definition for 'var'
Undefined global functions or variables:
  cor mahalanobis var
Consider adding
  importFrom("stats", "cor", "mahalanobis", "var")
to your NAMESPACE file.
fit,Leader: no visible global function definition for 'lm'
plotfit,Leader: no visible global function definition for 'par'
plotfit,Leader: no visible global function definition for 'plot'
Undefined global functions or variables:
  lm par plot
Consider adding
  importFrom("graphics", "par", "plot")
  importFrom("stats", "lm")
to your NAMESPACE file.
Installation failed.
*
Installation failed.
See  for details.
*
Error(s) in re-building vignettes:
--- re-building 'wordbankr.Rmd' using rmarkdown
Warning in .local(conn, statement, ...) :
  Decimal MySQL column 6 imported as numeric
Warning: `rename_()` is deprecated as of dplyr 0.7.0.
Please use `rename()` instead.
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Quitting from lines 31-33 (wordbankr.Rmd) 
Error: processing vignette 'wordbankr.Rmd' failed with diagnostics:
no applicable method for 'rename_' applied to an object of class "c('tbl_MySQLConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
--- failed re-building 'wordbankr.Rmd'

SUMMARY: processing the following file failed:
  'wordbankr.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See  for details.
Malformed Description field: should contain one or more complete sentences.
Packages in Depends field not imported from:
  'plyr' 'reshape2'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
wordmatch: no visible global function definition for 'llply'
wordmatch : <anonymous>: no visible global function definition for
  'llply'
wordmatch: no visible global function definition for 'melt'
wordmatch: no visible global function definition for 'count'
Undefined global functions or variables:
  count llply melt
Installation failed.
See  for details.
Warning in file(out, "wt") :
  cannot open file 'D:\temp\RtmpoldPsp\file198bc391857/wordpiece_tokenize.R': No space left on device
Error in file(out, "wt") : cannot open the connection
Execution halted
Running massageExamples to create 'wordpiece-Ex.R' failed
Error in file(out, "wt") : cannot open the connection
Calls: <Anonymous> -> Rd2ex -> file
In addition: Warning message:
In file(out, "wt") :
  cannot open file 'D:\temp\Rtmp8ANk99\file1b4043b607467/wordpiece_tokenize.R': No space left on device
Execution halted
 NONE
Running 'testthat.R' [1s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(wordpiece)
  > 
  > test_check("wordpiece")
  == Failed tests ================================================================
  -- Error (test-tokenization.R:1:1): (code run outside of `test_that()`) --------
  Error: object 'r' not found
  
  [ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ]
  Error: Test failures
  Execution halted
Rd conversion errors:
Warning in close.connection(con) :
  Problem closing connection:  No space left on device
Warning in file(out, "wt") :
  cannot open file 'D:\temp\Rtmpw59LeQ\ltx124f02fb257a4/dot-convert_to_unicode.tex': No space left on device
Error in file(out, "wt") : cannot open the connection
Installation failed.
*
ESSLLI08_Nouns.Rd: Sections \title, and \name must exist and be unique in Rd files
RG65.Rd: Sections \title, and \name must exist and be unique in Rd files
SemCorWSD.Rd: Sections \title, and \name must exist and be unique in Rd files
WordSim353.Rd: Sections \title, and \name must exist and be unique in Rd files
as_distmat.Rd: Sections \title, and \name must exist and be unique in Rd files
as_dsm.Rd: Sections \title, and \name must exist and be unique in Rd files
as_dsm_tm.Rd: Sections \title, and \name must exist and be unique in Rd files
as_matrix_dsm.Rd: Sections \title, and \name must exist and be unique in Rd files
check_dsm.Rd: Sections \title, and \name must exist and be unique in Rd files
Error writing to connection:  No space left on device
convert_lemma.Rd: Sections \title, and \name must exist and be unique in Rd files
dim_dsm.Rd: Sections \title, and \name must exist and be unique in Rd files
dimnames_dsm.Rd: Sections \title, and \name must exist and be unique in Rd files
Error writing* checking Rd metadata ... OK
Warning in file(out, "wt") :
  cannot open file 'D:\temp\RtmpCUb7J5\file150bc66e33773/DSM_SingularValues.R': No space left on device
Error in file(out, "wt") : cannot open the connection
Execution halted
Running massageExamples to create 'wordspace-Ex.R' failed
Error in file(out, "wt") : cannot open the connection
Calls: <Anonymous> -> Rd2ex -> file
In addition: Warning message:
In file(out, "wt") :
  cannot open file 'D:\temp\Rtmpma2FSN\file85cc3467148d/DSM_SingularValues.R': No space left on device
Execution halted
 NONE
Running 'testthat.R' [2s]
unable to create 'd:/Rcompile/CRANpkg/local/3.6/wordspace.Rcheck/tests_x64'
Installation failed.
See  for details.
Installation failed.
See * DONE
Installation failed.
See  for details.
Installation failed.
See  for details.
Malformed Description field: should contain one or more complete sentences.
installed size is  6.6Mb
  sub-directories of 1Mb or more:
    data   6.5Mb
Malformed Description field: should contain one or more complete sentences.
installed size is 12.6Mb
  sub-directories of 1Mb or more:
    data  12.6Mb
Malformed Description field: should contain one or more complete sentences.
installed size is 11.2Mb
  sub-directories of 1Mb or more:
    data  11.1Mb
installed size is 11.4Mb
  sub-directories of 1Mb or more:
    data  11.3Mb
installed size is 11.2Mb
  sub-directories of 1Mb or more:
    data  11.1Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/wrassp.Rcheck/00install.out' for details.
Installation failed.
See  for details.
Malformed Title field: should not end in a period.
* ... OK*
installed size is  6.8Mb
  sub-directories of 1Mb or more:
    doc       3.4Mb
    extdata   2.9Mb
Installation failed.
See  for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/wru.Rcheck/00install.out' for details.
Installation failed.
See  for details.
File
  LICENCE
is not mentioned in the DESCRIPTION file.
'library' or 'require' call to 'MASS' which was already attached by Depends.
  Please remove these calls from your code.
simul.wsvm: no visible binding for global variable 'mixture.example'
wsvm.boost: no visible global function definition for 'plot'
Undefined global functions or variables:
  mixture.example plot
Consider adding
  importFrom("graphics", "plot")
to your NAMESPACE file.
Installation failed.
See  for details.
Installation failed.
See  for details.
Malformed Title field: should not end in a period.
Malformed Description field: should contain one or more complete sentences.
File
  inst/LICENCE
will install at top-level and is not mentioned in the DESCRIPTION file.
Installation failed.
See * DONE
*
See * DONE
*
Malformed Description field: should contain one or more complete sentences.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/x12.Rcheck/00install.out' for details.
Found the following notes/warnings:
  Non-staged installation was used
See 'd:/Rcompile/CRANpkg/local/3.6/x13binary.Rcheck/00install.out' for details.
Installation failed.
See * DONE
Installation failed.
See * DONE
See *
Installation failed.
See  for details.
installed size is  5.7Mb
  sub-directories of 1Mb or more:
    libs   5.6Mb
Found a 'configure.in' file: 'configure.ac' has long been preferred.
Installation failed.
See  for details.
Installation failed.
See * DONE
Installation failed.
See  for details.
Installation failed.
See * DONE
Installation failed.
See  for details.
File
  LICENCE
is not mentioned in the DESCRIPTION file.
quadplot: no visible global function definition for 'median'
xgobi: no visible global function definition for 'write.table'
Undefined global functions or variables:
  median write.table
Consider adding
  importFrom("stats", "median")
  importFrom("utils", "write.table")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/xgxr.Rcheck/00install.out'*
XHWE: no visible global function definition for 'read.table'
result: no visible global function definition for 'pchisq'
result: no visible global function definition for 'rbinom'
result: no visible global function definition for 'rmultinom'
Undefined global functions or variables:
  pchisq rbinom read.table rmultinom
Consider adding
  importFrom("stats", "pchisq", "rbinom", "rmultinom")
  importFrom("utils", "read.table")
to your NAMESPACE file.
Installation failed.
See  for details.
installed size is 36.4Mb
  sub-directories of 1Mb or more:
    java  34.2Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/xlink.Rcheck/00install.out'
Installation failed.
See * DONE
Installation failed.
See * DONE
installed size is 10.8Mb
  sub-directories of 1Mb or more:
    java  10.7Mb
Installation failed.
See  for details.
Installation failed.
See  for details.
*
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/Xmisc.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/xml2.Rcheck/00install.out'*
See *
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/XML2R.Rcheck/00install.out' for details.
Installation failed.
*
Installation failed.
See  for details.
installed size is  7.1Mb
  sub-directories of 1Mb or more:
    exampleData   1.3Mb
    libs          4.2Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/xmlr.Rcheck/00install.out'*
Installation failed.
See  for details.
Installation failed.
See  for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/xoi.Rcheck/00install.out'* DONE
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/xopen.Rcheck/00install.out'
Installation failed.
See  for details.
Running examples in 'xplain-Ex.R' failed
The error most likely occurred in:

> ### Name: xplain
> ### Title: Showing interpretation information for the results of a function
> ### Aliases: xplain
> 
> ### ** Examples
> 
> 
> library(car)
Loading required package: carData
> 
> xplain(call="lm(education ~ young + income + urban, data=Anscombe)",
+   xml="http://www.zuckarelli.de/xplain/example_lm.xml")
Error in xplain(call = "lm(education ~ young + income + urban, data=Anscombe)",  : 
  xplain XML file '-' does not exist.
Execution halted
Installation failed.
See * DONE
Installation failed.
See  for details.
See * DONE
Installation failed.
See  for details.
*
Installation failed.
See  for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/xrf.Rcheck/00install.out'* DONE
Installation failed.
See  for details.
*
Installation failed.
See  for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/XR.Rcheck/00install.out'*
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/xslt.Rcheck/00install.out' for details.
Installation failed.
See  for details.
Installation failed.
See  for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/xSub.Rcheck/00install.out'*
Installation failed.
See * DONE
Installation failed.
See *
Installation failed.
See  for details.
*
Installation failed.
See  for details.
Installation failed.
See  for details.
*
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/xyz.Rcheck/00install.out'
Installation failed.
See  for details.
Installation failed.
See  for details.
Installation failed.
See  for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/yaps.Rcheck/00install.out'*
Installation failed.
See  for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/yarrr.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/yatah.Rcheck/00install.out'
Package in Depends field not imported from: 'compiler'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
bootstrapswapcurve: no visible global function definition for 'ts'
fitted: no visible global function definition for 'ts'
forwardrates: no visible global function definition for 'ts'
residuals: no visible global function definition for 'ts'
tZC_NS: no visible global function definition for 'cmpfun'
tZC_NS_extra: no visible global function definition for 'cmpfun'
tZC_SV: no visible global function definition for 'cmpfun'
tZC_SV_extra: no visible global function definition for 'cmpfun'
ycextra: no visible global function definition for 'new'
ycinter: no visible global function definition for 'new'
ycplot: no visible global function definition for 'par'
ycplot: no visible global function definition for 'points'
ycplot: no visible global function definition for 'abline'
ycplot: no visible global function definition for 'hist'
ycplot: no visible global function definition for 'lines'
ycplot: no visible global function definition for 'density'
ycplot: no visible global function definition for 'qqnorm'
ycplot: no visible global function definition for 'qqline'
ycsummary: no visible global function definition for 'shapiro.test'
ycsummary: no visible global function definition for 'pf'
Undefined global functions or variables:
  abline cmpfun density hist lines new par pf points qqline qqnorm
  shapiro.test ts
Consider adding
  importFrom("graphics", "abline", "hist", "lines", "par", "points")
  importFrom("methods", "new")
  importFrom("stats", "density", "pf", "qqline", "qqnorm",
             "shapiro.test", "ts")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/yesno.Rcheck/00install.out'
.NS.estimator: no visible global function definition for 'lm'
.NS.estimator: no visible global function definition for 'coef'
.NS.estimator: no visible global function definition for 'na.omit'
.NS.estimator: no visible global function definition for 'resid'
.NSS.estimator: no visible global function definition for 'lm'
.NSS.estimator: no visible global function definition for 'coef'
.NSS.estimator: no visible global function definition for 'na.omit'
.NSS.estimator: no visible global function definition for 'resid'
NSrates: no visible global function definition for 'time'
Nelson.Siegel: no visible global function definition for 'optimize'
Srates: no visible global function definition for 'time'
Svensson: no visible global function definition for 'median'
Svensson: no visible global function definition for 'optimize'
Undefined global functions or variables:
  coef lm median na.omit optimize resid time
Consider adding
  importFrom("stats", "coef", "lm", "median", "na.omit", "optimize",
             "resid", "time")
to your NAMESPACE file.
kmeansN: no visible global function definition for 'kmeans'
kmeansN: no visible global function definition for 'aggregate'
kmeansN2: no visible global function definition for 'aggregate'
kmeansN2: no visible binding for global variable 'sd'
Undefined global functions or variables:
  aggregate kmeans sd
Consider adding
  importFrom("stats", "aggregate", "kmeans", "sd")
to your NAMESPACE file.
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GNU make is a SystemRequirements.
Running examples in 'YPmodel-Ex.R' failed
The error most likely occurred in:

> ### Name: YPmodel-package
> ### Title: The short-term and long-term hazard ratio model for survival
> ###   data
> ### Aliases: YPmodel-package
> ### Keywords: Survival analysis
> 
> ### ** Examples
> 
> 	library(YPmodel)
> 	data(gastric)
> 	YPmodel(gastric, repNum=100)
Error in if (class(data)[1] != "matrix" || class(data)[2] != "array") { : 
  missing value where TRUE/FALSE needed
Calls: YPmodel ... fun.adlgrk -> fun.flipud -> fun.cumsum -> fun.flipud
Execution halted
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Malformed Description field: should contain one or more complete sentences.
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Package suggested but not available for checking: 'zdat'
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