Running ‘testthat.R’ [17s/19s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(BiocManager)
  > 
  > test_check("BiocManager")
  ══ Skipped tests ═══════════════════════════════════════════════════════════════
  ● BiocVersion not installed (4)
  ● On CRAN (1)
  ● too idiosyncratic for standardized testing (1)
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error (test_install.R:28:5): .install_repos() works ─────────────────────────
  Error: Bioconductor version '3.13' requires R version '4.1'; R version is too new; see
    https://bioconductor.org/install
  Backtrace:
      █
   1. └─BiocManager::repositories() test_install.R:28:4
   2.   └─BiocManager:::.version_validate(version)
   3.     ├─base::ifelse(.is_CRAN_check(), .message(txt), .stop(txt))
   4.     └─BiocManager:::.stop(txt)
  ── Error (test_install.R:35:5): .install_github() works ────────────────────────
  Error: Bioconductor version '3.13' requires R version '4.1'; R version is too new; see
    https://bioconductor.org/install
  Backtrace:
      █
   1. └─BiocManager::repositories() test_install.R:35:4
   2.   └─BiocManager:::.version_validate(version)
   3.     ├─base::ifelse(.is_CRAN_check(), .message(txt), .stop(txt))
   4.     └─BiocManager:::.stop(txt)
  ── Error (???): install() without package names passes ... to install.packages ──
  Error: Bioconductor version '3.13' requires R version '4.1'; R version is too new; see
    https://bioconductor.org/install
  Backtrace:
      █
   1. └─BiocManager::install(ask = FALSE, INSTALL_opts = "--build")
   2.   └─BiocManager:::.version_validate(version)
   3.     ├─base::ifelse(.is_CRAN_check(), .message(txt), .stop(txt))
   4.     └─BiocManager:::.stop(txt)
  ── Error (test_repositories.R:9:5): repositories() returns all repos ───────────
  Error: Bioconductor version '3.13' requires R version '4.1'; R version is too new; see
    https://bioconductor.org/install
  Backtrace:
      █
   1. ├─testthat::expect_true(all(allOS %in% names(repositories()))) test_repositories.R:9:4
   2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
   3. │   └─rlang::eval_bare(expr, quo_get_env(quo))
   4. ├─allOS %in% names(repositories())
   5. └─BiocManager::repositories()
   6.   └─BiocManager:::.version_validate(version)
   7.     ├─base::ifelse(.is_CRAN_check(), .message(txt), .stop(txt))
   8.     └─BiocManager:::.stop(txt)
  ── Error (test_repositories.R:15:5): repositories() does not return any NA repos ──
  Error: Bioconductor version '3.13' requires R version '4.1'; R version is too new; see
    https://bioconductor.org/install
  Backtrace:
      █
   1. ├─testthat::expect_true(!anyNA(repositories())) test_repositories.R:15:4
   2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
   3. │   └─rlang::eval_bare(expr, quo_get_env(quo))
   4. └─BiocManager::repositories()
   5.   └─BiocManager:::.version_validate(version)
   6.     ├─base::ifelse(.is_CRAN_check(), .message(txt), .stop(txt))
   7.     └─BiocManager:::.stop(txt)
  ── Error (test_repositories.R:21:5): repositories() returns expected order ─────
  Error: Bioconductor version '3.13' requires R version '4.1'; R version is too new; see
    https://bioconductor.org/install
  Backtrace:
      █
   1. ├─testthat::expect_identical("BioCsoft", names(repositories())[[1]]) test_repositories.R:21:4
   2. │ └─testthat::quasi_label(enquo(expected), expected.label, arg = "expected")
   3. │   └─rlang::eval_bare(expr, quo_get_env(quo))
   4. └─BiocManager::repositories()
   5.   └─BiocManager:::.version_validate(version)
   6.     ├─base::ifelse(.is_CRAN_check(), .message(txt), .stop(txt))
   7.     └─BiocManager:::.stop(txt)
  ── Error (test_repositories.R:28:5): 'site_repository=' inserted correctly ─────
  Error: Bioconductor version '3.13' requires R version '4.1'; R version is too new; see
    https://bioconductor.org/install
  Backtrace:
      █
   1. └─BiocManager::repositories(site_repository) test_repositories.R:28:4
   2.   └─BiocManager:::.version_validate(version)
   3.     ├─base::ifelse(.is_CRAN_check(), .message(txt), .stop(txt))
   4.     └─BiocManager:::.stop(txt)
  ── Error (test_repositories.R:45:9): repositories(version = 'devel') works ─────
  Error: Bioconductor version '3.13' requires R version '4.1'; R version is too new; see
    https://bioconductor.org/install
  Backtrace:
      █
   1. ├─testthat::expect_equal(...) test_repositories.R:45:8
   2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
   3. │   └─rlang::eval_bare(expr, quo_get_env(quo))
   4. └─BiocManager::repositories(version = .version_bioc("devel"))
   5.   └─BiocManager:::.version_validate(version)
   6.     ├─base::ifelse(.is_CRAN_check(), .message(txt), .stop(txt))
   7.     └─BiocManager:::.stop(txt)
  ── Error (test_repositories.R:70:5): repositories helper replaces correct URL ──
  Error: Bioconductor version '3.13' requires R version '4.1'; R version is too new; see
    https://bioconductor.org/install
  Backtrace:
       █
    1. ├─withr::with_options(...) test_repositories.R:70:4
    2. │ └─base::force(code)
    3. ├─testthat::expect_message(repositories(), "'getOption\\(\"repos\"\\)'") test_repositories.R:75:15
    4. │ └─testthat:::quasi_capture(enquo(object), label, capture_messages)
    5. │   ├─testthat:::.capture(...)
    6. │   │ └─base::withCallingHandlers(...)
    7. │   └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
    8. └─BiocManager::repositories()
    9.   └─BiocManager:::.version_validate(version)
   10.     ├─base::ifelse(.is_CRAN_check(), .message(txt), .stop(txt))
   11.     └─BiocManager:::.stop(txt)
  ── Error (???): valid returns an empty list without internet ───────────────────
  Error: Bioconductor version '3.13' requires R version '4.1'; R version is too new; see
    https://bioconductor.org/install
  Backtrace:
      █
   1. └─BiocManager::valid()
   2.   └─BiocManager:::.valid(...)
   3.     └─BiocManager:::.version_validate(version)
   4.       ├─base::ifelse(.is_CRAN_check(), .message(txt), .stop(txt))
   5.       └─BiocManager:::.stop(txt)
  ── Failure (test_version.R:98:9): .version_validity('devel') works ─────────────
  .version_validity("devel") is not TRUE
  
  `actual` is a character vector ('Bioconductor version \'3.13\' requires R version \'4.1\'; R version is too new; see\n  https://bioconductor.org/install')
  `expected` is a logical vector (TRUE)
  
  [ FAIL 11 | WARN 0 | SKIP 6 | PASS 82 ]
  Error: Test failures
  Execution halted