Running 'test-all.R' [87s/98s]
Running the tests in 'tests/test-all.R' failed.
Complete output:
  > library(testthat)
  > test_check("EpiModel")
  Loading required package: EpiModel
  Loading required package: deSolve
  Loading required package: networkDynamic
  Loading required package: network
  network: Classes for Relational Data
  Version 1.16.1 created on 2020-10-06.
  copyright (c) 2005, Carter T. Butts, University of California-Irvine
                      Mark S. Handcock, University of California -- Los Angeles
                      David R. Hunter, Penn State University
                      Martina Morris, University of Washington
                      Skye Bender-deMoll, University of Washington
   For citation information, type citation("network").
   Type help("network-package") to get started.
  
  
  networkDynamic: version 0.10.1, created on 2020-01-16
  Copyright (c) 2020, Carter T. Butts, University of California -- Irvine
                      Ayn Leslie-Cook, University of Washington
                      Pavel N. Krivitsky, University of Wollongong
                      Skye Bender-deMoll, University of Washington
                      with contributions from
                      Zack Almquist, University of California -- Irvine
                      David R. Hunter, Penn State University
                      Li Wang
                      Kirk Li, University of Washington
                      Steven M. Goodreau, University of Washington
                      Jeffrey Horner
                      Martina Morris, University of Washington
  Based on "statnet" project software (statnet.org).
  For license and citation information see statnet.org/attribution
  or type citation("networkDynamic").
  
  Loading required package: tergm
  Loading required package: ergm
  
  ergm: version 3.11.0, created on 2020-10-14
  Copyright (c) 2020, Mark S. Handcock, University of California -- Los Angeles
                      David R. Hunter, Penn State University
                      Carter T. Butts, University of California -- Irvine
                      Steven M. Goodreau, University of Washington
                      Pavel N. Krivitsky, UNSW Sydney
                      Martina Morris, University of Washington
                      with contributions from
                      Li Wang
                      Kirk Li, University of Washington
                      Skye Bender-deMoll, University of Washington
                      Chad Klumb
                      Michal Bojanowski, Kozminski University
                      Ben Bolker
  Based on "statnet" project software (statnet.org).
  For license and citation information see statnet.org/attribution
  or type citation("ergm").
  
  NOTE: Versions before 3.6.1 had a bug in the implementation of the bd()
  constraint which distorted the sampled distribution somewhat. In
  addition, Sampson's Monks datasets had mislabeled vertices. See the
  NEWS and the documentation for more details.
  
  NOTE: Some common term arguments pertaining to vertex attribute and
  level selection have changed in 3.10.0. See terms help for more
  details. Use 'options(ergm.term=list(version="3.9.4"))' to use old
  behavior.
  
  
  tergm: version 3.7.0, created on 2020-10-15
  Copyright (c) 2020, Pavel N. Krivitsky, UNSW Sydney
                      Mark S. Handcock, University of California -- Los Angeles
                      with contributions from
                      David R. Hunter, Penn State University
                      Steven M. Goodreau, University of Washington
                      Martina Morris, University of Washington
                      Nicole Bohme Carnegie, New York University
                      Carter T. Butts, University of California -- Irvine
                      Ayn Leslie-Cook, University of Washington
                      Skye Bender-deMoll
                      Li Wang
                      Kirk Li, University of Washington
                      Chad Klumb
  Based on "statnet" project software (statnet.org).
  For license and citation information see statnet.org/attribution
  or type citation("tergm").
  
  Loading required package: tergmLite
  EpiModel NOTE: EpiModel 2.0 implements significant changes to the
  EpiModel application programming interface (API), which may require
  updates to model code written under EpiModel 1.x.  See
  https://epimodel.org/ for migration guidance.
  
  
  Starting Network Simulation...
  Sim = 1/5
  Sim = 2/5
  Sim = 3/5
  Sim = 4/5
  Sim = 5/5
  Starting Network Simulation...
  Sim = 1/5
  Sim = 2/5
  Sim = 3/5
  Sim = 4/5
  Sim = 5/5
  Starting Network Simulation...
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 2/20
  Prevalence: 13
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 3/20
  Prevalence: 15
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 4/20
  Prevalence: 21
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 5/20
  Prevalence: 26
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 6/20
  Prevalence: 39
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 7/20
  Prevalence: 55
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 8/20
  Prevalence: 70
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 9/20
  Prevalence: 89
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 10/20
  Prevalence: 110
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 11/20
  Prevalence: 137
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 12/20
  Prevalence: 163
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 13/20
  Prevalence: 212
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 14/20
  Prevalence: 260
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 15/20
  Prevalence: 308
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 16/20
  Prevalence: 357
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 17/20
  Prevalence: 388
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 18/20
  Prevalence: 434
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 19/20
  Prevalence: 461
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 20/20
  Prevalence: 481
  Population Size: 1000
  ----------------------------
  EpiModel Summary
  =======================
  Model class: netsim
  
  Simulation Details
  -----------------------
  Model type: SI
  No. simulations: 1
  No. time steps: 20
  No. NW groups: 1
  
  Model Statistics
  ------------------------------
  Time: 20 
  ------------------------------ 
            mean  sd    pct
  Suscept.   519   0  0.519
  Infect.    481   0  0.481
  Total     1000   0  1.000
  S -> I      20   0     NA
  ------------------------------ 
  
  Starting Network Simulation...
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 2/10
  Prevalence: 17
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 3/10
  Prevalence: 24
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 4/10
  Prevalence: 28
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 5/10
  Prevalence: 33
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 6/10
  Prevalence: 38
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 7/10
  Prevalence: 43
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 8/10
  Prevalence: 47
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 9/10
  Prevalence: 52
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 10/10
  Prevalence: 59
  Population Size: 1000
  ----------------------------
  EpiModel Summary
  =======================
  Model class: netsim
  
  Simulation Details
  -----------------------
  Model type: SIS
  No. simulations: 1
  No. time steps: 10
  No. NW groups: 1
  
  Model Statistics
  ------------------------------
  Time: 10 
  ------------------------------ 
            mean  sd    pct
  Suscept.   941   0  0.941
  Infect.     59   0  0.059
  Total     1000   0  1.000
  S -> I       8   0     NA
  I -> S       1   0     NA
  ------------------------------ 
  
  Starting Network Simulation...
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 2/10
  Prevalence: 15
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 3/10
  Prevalence: 20
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 4/10
  Prevalence: 24
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 5/10
  Prevalence: 30
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 6/10
  Prevalence: 35
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 7/10
  Prevalence: 40
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 8/10
  Prevalence: 45
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 9/10
  Prevalence: 53
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 10/10
  Prevalence: 59
  Population Size: 1000
  ----------------------------
  EpiModel Summary
  =======================
  Model class: netsim
  
  Simulation Details
  -----------------------
  Model type: SIR
  No. simulations: 1
  No. time steps: 10
  No. NW groups: 1
  
  Model Statistics
  ------------------------------
  Time: 10 
  ------------------------------ 
            mean  sd    pct
  Suscept.   929   0  0.929
  Infect.     59   0  0.059
  Recov.      12   0  0.012
  Total     1000   0  1.000
  S -> I       7   0     NA
  I -> R       1   0     NA
  ------------------------------ 
  
  Starting Network Simulation...
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 2/20
  Prevalence: 75
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 3/20
  Prevalence: 100
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 4/20
  Prevalence: 125
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 5/20
  Prevalence: 149
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 6/20
  Prevalence: 180
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 7/20
  Prevalence: 209
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 8/20
  Prevalence: 235
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 9/20
  Prevalence: 264
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 10/20
  Prevalence: 297
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 11/20
  Prevalence: 323
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 12/20
  Prevalence: 351
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 13/20
  Prevalence: 376
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 14/20
  Prevalence: 408
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 15/20
  Prevalence: 442
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 16/20
  Prevalence: 465
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 17/20
  Prevalence: 490
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 18/20
  Prevalence: 506
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 19/20
  Prevalence: 523
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 20/20
  Prevalence: 540
  Population Size: 1000
  ----------------------------
  EpiModel Summary
  =======================
  Model class: netsim
  
  Simulation Details
  -----------------------
  Model type: SI
  No. simulations: 1
  No. time steps: 20
  No. NW groups: 2
  
  Model Statistics
  ------------------------------------------------------------
  Time: 20 
  ------------------------------------------------------------ 
            mean:g1  sd:g1  pct:g1  mean:g2  sd:g2  pct:g2
  Suscept.      230      0    0.46      230      0    0.46
  Infect.       270      0    0.54      270      0    0.54
  Total         500      0    1.00      500      0    1.00
  S -> I         10      0      NA        7      0      NA
  ------------------------------------------------------------ 
  
  Starting Network Simulation...
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 2/10
  Prevalence: 59
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 3/10
  Prevalence: 73
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 4/10
  Prevalence: 83
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 5/10
  Prevalence: 92
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 6/10
  Prevalence: 106
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 7/10
  Prevalence: 116
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 8/10
  Prevalence: 124
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 9/10
  Prevalence: 131
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 10/10
  Prevalence: 144
  Population Size: 1000
  ----------------------------
  EpiModel Summary
  =======================
  Model class: netsim
  
  Simulation Details
  -----------------------
  Model type: SIS
  No. simulations: 1
  No. time steps: 10
  No. NW groups: 2
  
  Model Statistics
  ------------------------------------------------------------
  Time: 10 
  ------------------------------------------------------------ 
            mean:g1  sd:g1  pct:g1  mean:g2  sd:g2  pct:g2
  Suscept.      421      0   0.842      435      0    0.87
  Infect.        79      0   0.158       65      0    0.13
  Total         500      0   1.000      500      0    1.00
  S -> I          9      0      NA        6      0      NA
  I -> S          2      0      NA        0      0      NA
  ------------------------------------------------------------ 
  
  Starting Network Simulation...
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 2/10
  Prevalence: 26
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 3/10
  Prevalence: 33
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 4/10
  Prevalence: 48
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 5/10
  Prevalence: 55
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 6/10
  Prevalence: 65
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 7/10
  Prevalence: 72
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 8/10
  Prevalence: 80
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 9/10
  Prevalence: 92
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 10/10
  Prevalence: 101
  Population Size: 1000
  ----------------------------
  EpiModel Summary
  =======================
  Model class: netsim
  
  Simulation Details
  -----------------------
  Model type: SIR
  No. simulations: 1
  No. time steps: 10
  No. NW groups: 2
  
  Model Statistics
  ------------------------------------------------------------
  Time: 10 
  ------------------------------------------------------------ 
            mean:g1  sd:g1  pct:g1  mean:g2  sd:g2  pct:g2
  Suscept.      434      0   0.868      446      0   0.892
  Infect.        56      0   0.112       45      0   0.090
  Recov.         10      0   0.020        9      0   0.018
  Total         500      0   1.000      500      0   1.000
  S -> I          7      0      NA        3      0      NA
  I -> R          0      0      NA        1      0      NA
  ------------------------------------------------------------ 
  
  Starting Network Simulation...
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 2/10
  Prevalence: 14
  Population Size: 998
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 3/10
  Prevalence: 16
  Population Size: 1001
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 4/10
  Prevalence: 21
  Population Size: 999
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 5/10
  Prevalence: 27
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 6/10
  Prevalence: 32
  Population Size: 1001
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 7/10
  Prevalence: 35
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 8/10
  Prevalence: 38
  Population Size: 998
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 9/10
  Prevalence: 43
  Population Size: 996
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 10/10
  Prevalence: 51
  Population Size: 993
  ----------------------------
  EpiModel Summary
  =======================
  Model class: netsim
  
  Simulation Details
  -----------------------
  Model type: SI
  No. simulations: 1
  No. time steps: 10
  No. NW groups: 1
  
  Model Statistics
  ------------------------------
  Time: 10 
  ------------------------------ 
                  mean  sd    pct
  Suscept.         942   0  0.949
  Infect.           51   0  0.051
  Total            993   0  1.000
  S -> I             8   0     NA
  Arrival ->         6   0     NA
  S Departure ->     9   0     NA
  I Departure ->     0   0     NA
  ------------------------------ 
  
  Starting Network Simulation...
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 2/10
  Prevalence: 9
  Population Size: 997
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 3/10
  Prevalence: 10
  Population Size: 997
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 4/10
  Prevalence: 12
  Population Size: 995
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 5/10
  Prevalence: 15
  Population Size: 998
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 6/10
  Prevalence: 18
  Population Size: 992
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 7/10
  Prevalence: 23
  Population Size: 996
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 8/10
  Prevalence: 26
  Population Size: 1002
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 9/10
  Prevalence: 33
  Population Size: 1005
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 10/10
  Prevalence: 39
  Population Size: 1006
  ----------------------------
  EpiModel Summary
  =======================
  Model class: netsim
  
  Simulation Details
  -----------------------
  Model type: SIS
  No. simulations: 1
  No. time steps: 10
  No. NW groups: 1
  
  Model Statistics
  ------------------------------
  Time: 10 
  ------------------------------ 
                  mean  sd    pct
  Suscept.         967   0  0.961
  Infect.           39   0  0.039
  Total           1006   0  1.000
  S -> I             6   0     NA
  I -> S             0   0     NA
  Arrival ->         6   0     NA
  S Departure ->     5   0     NA
  I Departure ->     0   0     NA
  ------------------------------ 
  
  Starting Network Simulation...
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 2/10
  Prevalence: 16
  Population Size: 1001
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 3/10
  Prevalence: 20
  Population Size: 1001
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 4/10
  Prevalence: 22
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 5/10
  Prevalence: 24
  Population Size: 1004
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 6/10
  Prevalence: 26
  Population Size: 1004
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 7/10
  Prevalence: 26
  Population Size: 1006
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 8/10
  Prevalence: 28
  Population Size: 998
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 9/10
  Prevalence: 33
  Population Size: 994
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 10/10
  Prevalence: 33
  Population Size: 991
  ----------------------------
  Starting Network Simulation...
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 2/10
  Prevalence: 132
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 3/10
  Prevalence: 161
  Population Size: 1004
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 4/10
  Prevalence: 179
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 5/10
  Prevalence: 200
  Population Size: 1003
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 6/10
  Prevalence: 220
  Population Size: 1001
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 7/10
  Prevalence: 230
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 8/10
  Prevalence: 247
  Population Size: 1002
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 9/10
  Prevalence: 261
  Population Size: 1007
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 10/10
  Prevalence: 277
  Population Size: 1006
  ----------------------------
  Starting Network Simulation...
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 2/10
  Prevalence: 123
  Population Size: 1005
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 3/10
  Prevalence: 160
  Population Size: 1015
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 4/10
  Prevalence: 178
  Population Size: 1018
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 5/10
  Prevalence: 200
  Population Size: 1013
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 6/10
  Prevalence: 226
  Population Size: 1013
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 7/10
  Prevalence: 235
  Population Size: 1013
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 8/10
  Prevalence: 250
  Population Size: 1007
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 9/10
  Prevalence: 253
  Population Size: 1001
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 10/10
  Prevalence: 264
  Population Size: 1006
  ----------------------------
  Starting Network Simulation...
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 2/10
  Prevalence: 30
  Population Size: 1002
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 3/10
  Prevalence: 38
  Population Size: 1004
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 4/10
  Prevalence: 44
  Population Size: 1005
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 5/10
  Prevalence: 47
  Population Size: 1007
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 6/10
  Prevalence: 52
  Population Size: 1005
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 7/10
  Prevalence: 54
  Population Size: 1004
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 8/10
  Prevalence: 57
  Population Size: 997
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 9/10
  Prevalence: 63
  Population Size: 1001
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 10/10
  Prevalence: 72
  Population Size: 1002
  ----------------------------
  Starting Network Simulation...
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 2/5
  Prevalence: 18
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 3/5
  Prevalence: 23
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 4/5
  Prevalence: 27
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 5/5
  Prevalence: 36
  Population Size: 1000
  ----------------------------
  Starting Network Simulation...
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 2/5
  Prevalence: 13
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 3/5
  Prevalence: 19
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 4/5
  Prevalence: 28
  Population Size: 1000
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 5/5
  Prevalence: 41
  Population Size: 1000
  ----------------------------EpiModel Network Diagnostics
  =======================
  Diagnostic Method: Dynamic
  Simulations: 1
  Time Steps per Sim: 10
  
  Formation Diagnostics
  ----------------------- 
        Target Sim Mean Pct Diff Sim SD
  edges     15     13.5      -10  1.269
  
  Dissolution Diagnostics
  ----------------------- 
                 Target Sim Mean Pct Diff Sim SD
  Edge Duration   20.00    2.667  -86.667  2.082
  Pct Edges Diss   0.05    0.067   34.725  0.056
  EpiModel Network Diagnostics
  =======================
  Diagnostic Method: Dynamic
  Simulations: 2
  Time Steps per Sim: 10
  
  Formation Diagnostics
  ----------------------- 
        Target Sim Mean Pct Diff Sim SD
  edges     15       10  -33.333  0.918
  
  Dissolution Diagnostics
  ----------------------- 
                 Target Sim Mean Pct Diff Sim SD
  Edge Duration   20.00     3.00  -85.000     NA
  Pct Edges Diss   0.05     0.02  -59.798  0.041
  
  Network Diagnostics
  -----------------------
  - Simulating 2 networks
    |**|
  - Calculating formation statistics
  - Calculating duration statistics
    |**|
  - Calculating dissolution statistics
    |**|
   
  Network Diagnostics
  -----------------------
  - Simulating 1 network
  - Calculating formation statisticsEpiModel Network Diagnostics
  =======================
  Diagnostic Method: Dynamic
  Simulations: 2
  Time Steps per Sim: 50
  
  Formation Diagnostics
  ----------------------- 
                      Target Sim Mean Pct Diff Sim SD
  edges                   15    17.36   15.733  2.869
  offset(mix.loc.0.1)     NA     0.00       NA  0.000
  
  Dissolution Diagnostics
  ----------------------- 
                 Target Sim Mean Pct Diff Sim SD
  Edge Duration  40.000    21.00  -47.500 12.684
  Pct Edges Diss  0.025     0.02  -21.858  0.032
  EpiModel Network Diagnostics
  =======================
  Diagnostic Method: Dynamic
  Simulations: 2
  Time Steps per Sim: 50
  
  Formation Diagnostics
  ----------------------- 
                Target Sim Mean Pct Diff Sim SD
  edges             15   15.280    1.867  2.559
  meandeg           NA    0.611       NA  0.102
  concurrent        NA    5.470       NA  1.527
  nodematch.loc     NA   15.280       NA  2.559
  
  Dissolution Diagnostics
  ----------------------- 
                 Target Sim Mean Pct Diff Sim SD
  Edge Duration  40.000   16.125  -59.687  9.777
  Pct Edges Diss  0.025    0.022  -13.619  0.039
  EpiModel Network Diagnostics
  =======================
  Diagnostic Method: Dynamic
  Simulations: 2
  Time Steps per Sim: 50
  
  Formation Diagnostics
  ----------------------- 
              Target Sim Mean Pct Diff Sim SD
  edges           15    14.23   -5.133  2.978
  mix.loc.0.1      0     0.00      NaN  0.000
  
  Dissolution Diagnostics
  ----------------------- 
                 Target Sim Mean Pct Diff Sim SD
  Edge Duration  40.000   10.400   -74.00  6.275
  Pct Edges Diss  0.025    0.017   -32.19  0.035
  
  Network Diagnostics
  -----------------------
  - Simulating 250 networks
  - Calculating formation statistics
  Starting Network Simulation...
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 2/5
  Prevalence: 12
  Population Size: 50
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 3/5
  Prevalence: 13
  Population Size: 50
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 4/5
  Prevalence: 14
  Population Size: 49
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 5/5
  Prevalence: 14
  Population Size: 48
  ----------------------------
  Starting Network Simulation...
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 2/10
  Prevalence: 12
  Population Size: 50
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 3/10
  Prevalence: 13
  Population Size: 50
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 4/10
  Prevalence: 14
  Population Size: 50
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 5/10
  Prevalence: 14
  Population Size: 50
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 6/10
  Prevalence: 14
  Population Size: 49
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 7/10
  Prevalence: 16
  Population Size: 48
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 8/10
  Prevalence: 18
  Population Size: 48
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 9/10
  Prevalence: 19
  Population Size: 48
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 10/10
  Prevalence: 19
  Population Size: 48
  ----------------------------
  Starting Network Simulation...
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 2/10
  Prevalence: 13
  Population Size: 50
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 3/10
  Prevalence: 13
  Population Size: 50
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 4/10
  Prevalence: 15
  Population Size: 50
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 5/10
  Prevalence: 18
  Population Size: 50
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 6/10
  Prevalence: 18
  Population Size: 50
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 7/10
  Prevalence: 20
  Population Size: 50
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 8/10
  Prevalence: 21
  Population Size: 50
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 9/10
  Prevalence: 22
  Population Size: 50
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 10/10
  Prevalence: 23
  Population Size: 50
  ----------------------------
  Starting Network Simulation...
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 2/10
  Prevalence: 11
  Population Size: 50
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 3/10
  Prevalence: 13
  Population Size: 50
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 4/10
  Prevalence: 14
  Population Size: 50
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 5/10
  Prevalence: 15
  Population Size: 50
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 6/10
  Prevalence: 16
  Population Size: 50
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 7/10
  Prevalence: 16
  Population Size: 50
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 8/10
  Prevalence: 16
  Population Size: 50
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 9/10
  Prevalence: 16
  Population Size: 49
  ----------------------------
  Epidemic Simulation
  ----------------------------
  Simulation: 1/1
  Timestep: 10/10
  Prevalence: 16
  Population Size: 49
  ----------------------------
  Starting Network Simulation...
  Sim = 1/1
  1/10	
  2/10	
  3/10	
  4/10	
  5/10	
  6/10	
  7/10	
  8/10	
  9/10	
  10/10	== Skipped tests ===============================================================
  * On CRAN (81)
  
  == Failed tests ================================================================
  -- Error (test-netdx.R:28:3): Edges only models --------------------------------
  Error: argument of length 0
  Backtrace:
      x
   1. +-base::plot(dx2, type = "duration") test-netdx.R:28:2
   2. \-EpiModel:::plot.netdx(dx2, type = "duration")
  
  [ FAIL 1 | WARN 0 | SKIP 81 | PASS 327 ]
  Error: Test failures
  Execution halted