Running ‘aggregate.R’
  Comparing ‘aggregate.Rout’ to ‘aggregate.Rout.save’ ...4c4
< Linking to GEOS 3.8.1, GDAL 3.0.4, PROJ 6.3.2
---
> Linking to GEOS 3.8.0, GDAL 3.0.2, PROJ 6.2.1
  Running ‘cast.R’
  Comparing ‘cast.Rout’ to ‘cast.Rout.save’ ... OK
  Running ‘crs.R’
  Comparing ‘crs.Rout’ to ‘crs.Rout.save’ ...70,159c70
< > x0 = sp::CRS("+init=epsg:4326")
< > cat(sp::wkt(x0), "\n")
< GEOGCRS["WGS 84",
<     DATUM["World Geodetic System 1984",
<         ELLIPSOID["WGS 84",6378137,298.257223563,
<             LENGTHUNIT["metre",1]],
<         ID["EPSG",6326]],
<     PRIMEM["Greenwich",0,
<         ANGLEUNIT["degree",0.0174532925199433],
<         ID["EPSG",8901]],
<     CS[ellipsoidal,2],
<         AXIS["longitude",east,
<             ORDER[1],
<             ANGLEUNIT["degree",0.0174532925199433,
<                 ID["EPSG",9122]]],
<         AXIS["latitude",north,
<             ORDER[2],
<             ANGLEUNIT["degree",0.0174532925199433,
<                 ID["EPSG",9122]]],
<     USAGE[
<         SCOPE["unknown"],
<         AREA["World"],
<         BBOX[-90,-180,90,180]]] 
< > x = st_crs(x0)
< > x
< Coordinate Reference System:
<   User input: WGS 84 
<   wkt:
< GEOGCRS["WGS 84",
<     DATUM["World Geodetic System 1984",
<         ELLIPSOID["WGS 84",6378137,298.257223563,
<             LENGTHUNIT["metre",1]],
<         ID["EPSG",6326]],
<     PRIMEM["Greenwich",0,
<         ANGLEUNIT["degree",0.0174532925199433],
<         ID["EPSG",8901]],
<     CS[ellipsoidal,2],
<         AXIS["longitude",east,
<             ORDER[1],
<             ANGLEUNIT["degree",0.0174532925199433,
<                 ID["EPSG",9122]]],
<         AXIS["latitude",north,
<             ORDER[2],
<             ANGLEUNIT["degree",0.0174532925199433,
<                 ID["EPSG",9122]]],
<     USAGE[
<         SCOPE["unknown"],
<         AREA["World"],
<         BBOX[-90,-180,90,180]]]
< > 
< > y0 = st_crs(4326)
< > y0
< Coordinate Reference System:
<   User input: EPSG:4326 
<   wkt:
< GEOGCRS["WGS 84",
<     DATUM["World Geodetic System 1984",
<         ELLIPSOID["WGS 84",6378137,298.257223563,
<             LENGTHUNIT["metre",1]]],
<     PRIMEM["Greenwich",0,
<         ANGLEUNIT["degree",0.0174532925199433]],
<     CS[ellipsoidal,2],
<         AXIS["geodetic latitude (Lat)",north,
<             ORDER[1],
<             ANGLEUNIT["degree",0.0174532925199433]],
<         AXIS["geodetic longitude (Lon)",east,
<             ORDER[2],
<             ANGLEUNIT["degree",0.0174532925199433]],
<     USAGE[
<         SCOPE["unknown"],
<         AREA["World"],
<         BBOX[-90,-180,90,180]],
<     ID["EPSG",4326]]
< > y = as(y0, "CRS")
< > cat(sp::wkt(y), "\n")
< GEOGCRS["WGS 84 (with axis order normalized for visualization)",
<     DATUM["World Geodetic System 1984",
<         ELLIPSOID["WGS 84",6378137,298.257223563,
<             LENGTHUNIT["metre",1]]],
<     PRIMEM["Greenwich",0,
<         ANGLEUNIT["degree",0.0174532925199433]],
<     CS[ellipsoidal,2],
<         AXIS["geodetic longitude (Lon)",east,
<             ORDER[1],
<             ANGLEUNIT["degree",0.0174532925199433,
<                 ID["EPSG",9122]]],
<         AXIS["geodetic latitude (Lat)",north,
<             ORDER[2],
<             ANGLEUNIT["degree",0.0174532925199433,
<                 ID["EPSG",9122]]]] 
---
> > x = st_crs(sp::CRS("+proj=longlat +ellps=WGS84 +no_defs"))
  Running ‘dist.R’
  Comparing ‘dist.Rout’ to ‘dist.Rout.save’ ... OK
  Running ‘dplyr.R’
  Comparing ‘dplyr.Rout’ to ‘dplyr.Rout.save’ ...164,167d163
< Warning message:
< 'install_symbolic_unit' is deprecated.
< Use 'install_unit' instead.
< See help("Deprecated") 
  Running ‘empty.R’
  Comparing ‘empty.Rout’ to ‘empty.Rout.save’ ... OK
  Running ‘gdal_geom.R’
  Comparing ‘gdal_geom.Rout’ to ‘gdal_geom.Rout.save’ ...72d71
< although coordinates are longitude/latitude, st_union assumes that they are planar
84d82
< although coordinates are longitude/latitude, st_union assumes that they are planar
94d91
< although coordinates are longitude/latitude, st_union assumes that they are planar
105d101
< although coordinates are longitude/latitude, st_union assumes that they are planar
  Running ‘geos.R’ [13s/13s]
  Comparing ‘geos.Rout’ to ‘geos.Rout.save’ ...93a94
> although coordinates are longitude/latitude, st_relate_pattern assumes that they are planar
116a118
> although coordinates are longitude/latitude, st_relate_pattern assumes that they are planar
122c124
<   st_interpolate_aw assumes attributes are constant or uniform over areas of x
---
>   st_interpolate_aw assumes attributes are constant over areas of x
129c131
<   st_interpolate_aw assumes attributes are constant or uniform over areas of x
---
>   st_interpolate_aw assumes attributes are constant over areas of x
142a145
> although coordinates are longitude/latitude, st_relate_pattern assumes that they are planar
143a147,148
> although coordinates are longitude/latitude, st_intersects assumes that they are planar
> although coordinates are longitude/latitude, st_intersects assumes that they are planar
  Running ‘graticule.R’
  Comparing ‘graticule.Rout’ to ‘graticule.Rout.save’ ...55,73c55,56
< > (wrld2 = st_as_sf(map('world2', plot=FALSE, fill=TRUE )))
< Simple feature collection with 253 features and 1 field
< geometry type:  MULTIPOLYGON
< dimension:      XY
< bbox:           xmin: 0 ymin: -89.99001 xmax: 360 ymax: 83.59961
< geographic CRS: WGS 84
< First 10 features:
<                      ID                           geom
< 1                 Aruba MULTIPOLYGON (((290.1009 12...
< 2           Afghanistan MULTIPOLYGON (((74.89131 37...
< 3                Angola MULTIPOLYGON (((23.9665 -10...
< 4              Anguilla MULTIPOLYGON (((296.9988 18...
< 5               Albania MULTIPOLYGON (((20.06396 42...
< 6               Finland MULTIPOLYGON (((20.61133 60...
< 7               Andorra MULTIPOLYGON (((1.706055 42...
< 8  United Arab Emirates MULTIPOLYGON (((53.92783 24...
< 9             Argentina MULTIPOLYGON (((295.4508 -5...
< 10              Armenia MULTIPOLYGON (((45.55235 40...
< > try(plot(wrld2, graticule = TRUE))
---
> > wrld2 = st_as_sf(map('world2', plot=FALSE, fill=TRUE ))
> > plot(wrld2, graticule = TRUE)
  Running ‘grid.R’
  Comparing ‘grid.Rout’ to ‘grid.Rout.save’ ... OK
  Running ‘maps.R’
  Comparing ‘maps.Rout’ to ‘maps.Rout.save’ ... OK
  Running ‘plot.R’ [13s/13s]
  Comparing ‘plot.Rout’ to ‘plot.Rout.save’ ... OK
  Running ‘read.R’
  Comparing ‘read.Rout’ to ‘read.Rout.save’ ...330c330
< Reading layer `tst__' from data source `/data/gannet/ripley/R/packages/tests-clang/sf.Rcheck/tests/tst__.gpkg' using driver `GPKG'
---
> Reading layer `tst__' from data source `/home/edzer/git/sf.Rcheck/tests/tst__.gpkg' using driver `GPKG'
  Running ‘roundtrip.R’ [12s/13s]
  Comparing ‘roundtrip.Rout’ to ‘roundtrip.Rout.save’ ...146c146
< Reading layer `nc.gpkg' from data source `/data/gannet/ripley/R/packages/tests-clang/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
155,156d154
< [3] "Component 15: Attributes: < Component \"crs\": Component \"input\": 1 string mismatch >"
< [4] "Component 15: Attributes: < Component \"crs\": Component \"wkt\": 1 string mismatch >"  
  Running ‘s2.R’
  Running ‘sample.R’
  Comparing ‘sample.Rout’ to ‘sample.Rout.save’ ... OK
  Running ‘sfc.R’ [15s/15s]
  Comparing ‘sfc.Rout’ to ‘sfc.Rout.save’ ...335c335
< "3.8.1" "3.0.4" "6.3.2" 
---
> "3.8.0" "3.0.4" "7.0.0" 
568,570c568,570
< 1  1 5 b POINT (0 0)
< 2  2 6 c POINT (1 1)
< 3 NA 2 a POINT EMPTY
---
> 1 NA 2 a POINT EMPTY
> 2  1 5 b POINT (0 0)
> 3  2 6 c POINT (1 1)
641c641
< Reading layer `nc' from data source `/data/gannet/ripley/R/packages/tests-clang/sf.Rcheck/sf/shape/nc.shp' using driver `ESRI Shapefile'
---
> Reading layer `nc' from data source `/home/edzer/git/sf.Rcheck/sf/shape/nc.shp' using driver `ESRI Shapefile'
710a711
> although coordinates are longitude/latitude, st_relate_pattern assumes that they are planar
729,731c730,745
< > #FIXME:
< > # if (sf_extSoftVersion()["proj.4"] >= "4.9.0") # lwgeom breaks on this
< > #   (p <- st_sample(x, 10))
---
> > if (sf_extSoftVersion()["proj.4"] >= "4.9.0") # lwgeom breaks on this
> +   (p <- st_sample(x, 10))
> although coordinates are longitude/latitude, st_relate_pattern assumes that they are planar
> although coordinates are longitude/latitude, st_intersects assumes that they are planar
> although coordinates are longitude/latitude, st_intersects assumes that they are planar
> Geometry set for 10 features 
> geometry type:  POINT
> dimension:      XY
> bbox:           xmin: -148.196 ymin: -51.7878 xmax: 164.644 ymax: 79.4122
> geographic CRS: WGS 84
> First 5 geometries:
> POINT (-148.196 72.3139)
> POINT (143.075 54.9954)
> POINT (-143.112 25.5397)
> POINT (-89.2235 -18.4014)
> POINT (-104.569 79.4122)
737c751
< bbox:           xmin: 41.0557 ymin: 27.8024 xmax: 80.9558 ymax: 65.5424
---
> bbox:           xmin: -112.989 ymin: -51.7878 xmax: 53.2886 ymax: 79.4122
739c753
< MULTIPOINT ((57.2118 52.329), (80.9558 65.5424)...
---
> MULTIPOINT ((-104.569 79.4122), (-112.989 30.33...
741,748c755
< Geometry set for 1 feature 
< geometry type:  MULTIPOINT
< dimension:      XY
< bbox:           xmin: 19.3415 ymin: 9.17624 xmax: 80.9558 ymax: 65.5424
< CRS:            NA
< MULTIPOINT ((19.3415 18.6622), (57.1389 9.17624...
< Warning message:
< In st_sample.sfc(p, 3.3) : size is not an integer
---
> Error in st_sample.sfc(p, 3.3) : size should be an integer
757c764
< bbox:           xmin: 0 ymin: 0 xmax: 0.0914728 ymax: 1
---
> bbox:           xmin: 0 ymin: 0 xmax: 0.0875734 ymax: 1
759,761c766,768
< MULTIPOINT ((0 0.137868), (0 0.777635), (0 0.40...
< MULTIPOINT ((0.0914728 0), (0.073852 0), (0.003...
< MULTIPOINT ((0.0488222 1), (0.0716508 1), (0.08...
---
> MULTIPOINT ((0 0.40852), (0 0.415459), (0 0.999...
> MULTIPOINT ((0.00320272 0), (0.0642832 0), (0.0...
> MULTIPOINT ((0.0147658 1), (0.0201495 1), (0.04...
767c774
< bbox:           xmin: 1216510 ymin: 935867 xmax: 1428880 ymax: 1031510
---
> bbox:           xmin: 1200740 ymin: 942550 xmax: 1425790 ymax: 1036860
770,774c777,781
< POINT (1264558 935867)
< POINT (1256623 949384)
< POINT (1222665 972639)
< POINT (1333530 968278)
< POINT (1310838 958645)
---
> POINT (1228809 1011255)
> POINT (1233859 956721)
> POINT (1260039 1007661)
> POINT (1271553 1021505)
> POINT (1222552 980314)
782c789
< bbox:           xmin: -81.6893 ymin: 36.2492 xmax: -80.914 ymax: 36.5726
---
> bbox:           xmin: -81.7408 ymin: 36.2735 xmax: -80.9188 ymax: 36.5821
784,785c791,792
< MULTIPOINT ((-81.2401 36.3717), (-81.6893 36.36...
< MULTIPOINT ((-81.2629 36.4076), (-81.1374 36.56...
---
> MULTIPOINT ((-81.3308 36.5204), (-81.5205 36.58...
> MULTIPOINT ((-81.3127 36.4804), (-81.2655 36.43...
790c797
< bbox:           xmin: 0 ymin: 0 xmax: 0.095454 ymax: 1
---
> bbox:           xmin: 0 ymin: 0 xmax: 0.0987443 ymax: 1
792,794c799,801
< MULTIPOINT ((0 0.0104441), (0 0.0254442), (0 0....
< MULTIPOINT ((0.000452334 0), (0.0154525 0), (0....
< MULTIPOINT ((0.00545321 1), (0.0204533 1), (0.0...
---
> MULTIPOINT ((0 0.00373519), (0 0.0187353), (0 0...
> MULTIPOINT ((0.00874356 0), (0.0237437 0), (0.0...
> MULTIPOINT ((0.0137444 1), (0.0287446 1), (0.04...
798c805
<  [1] 104 106 110  96  98 120  87 105 104  99
---
>  [1] 106 107 111  92  95 122  86 105 105 101
808,814d814
< New names:
< * AREA -> AREA...1
< * PERIMETER -> PERIMETER...2
< * CNTY_ -> CNTY_...3
< * AREA -> AREA...16
< * PERIMETER -> PERIMETER...17
< * ...
844c844
< bbox:           xmin: -0.0500922 ymin: 0.992953 xmax: -0.0500922 ymax: 0.992953
---
> bbox:           xmin: 0.0102133 ymin: 1.06372 xmax: 0.0102133 ymax: 1.06372
846c846
< POINT (-0.0500922 0.992953)
---
> POINT (0.0102133 1.06372)
851,853d850
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO", prefer_proj = prefer_proj) :
<   Discarded datum Amersfoort in Proj4 definition
  Running ‘sfg.R’
  Comparing ‘sfg.Rout’ to ‘sfg.Rout.save’ ... OK
  Running ‘spatstat.R’
  Running ‘stars.R’
  Comparing ‘stars.Rout’ to ‘stars.Rout.save’ ...125c125
< Reading layer `nc.gpkg' from data source `/data/gannet/ripley/R/packages/tests-clang/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
143c143
<   from  to   offset      delta refsys point values x/y
---
>   from  to   offset      delta refsys point values    
197,200d196
< 
< 
< 
< 
  Running ‘testthat.R’ [17s/18s]
  Running ‘units.R’
  Comparing ‘units.Rout’ to ‘units.Rout.save’ ... OK
  Running ‘wkb.R’
  Comparing ‘wkb.Rout’ to ‘wkb.Rout.save’ ... OK
Running the tests in ‘tests/spatstat.R’ failed.
Complete output:
  > suppressPackageStartupMessages(library(spatstat))
  > suppressPackageStartupMessages(library(sf))
  > 
  > data(chicago)
  > st_as_sf(chicago)
  Error: 'as.psp' is not an exported object from 'namespace:spatstat'
  Execution halted