Error(s) in re-building vignettes:
  ...
--- re-building ‘compiledCode.Rnw’ using Sweave
Error: processing vignette 'compiledCode.Rnw' failed with diagnostics:
Running ‘texi2dvi’ on ‘compiledCode.tex’ failed.
LaTeX errors:
! Undefined control sequence.
<recently read> \Hy@colorlink 
                              
l.80 \begin{document}
                     
! Undefined control sequence.
\close@pdflink ->\Hy@endcolorlink 
                                  \Hy@VerboseLinkStop \pdfendlink 
l.80 \begin{document}
                     
! Undefined control sequence.
<recently read> \Hy@colorlink 
                              
l.80 \begin{document}
                     
! Undefined control sequence.
\close@pdflink ->\Hy@endcolorlink 
                                  \Hy@VerboseLinkStop \pdfendlink 
l.80 \begin{document}
                     
--- failed re-building ‘compiledCode.Rnw’

--- re-building ‘deSolve.Rnw’ using Sweave
Warning in lsoda(y, times, func, parms, ...) :
  repeated error test failures on a step, but integration was successful - singularity ?
Warning in lsoda(y, times, func, parms, ...) :
  Returning early. Results are accurate, as far as they go
Warning in lsoda(y, times, func, parms, ...) :
  an excessive amount of work (> maxsteps ) was done, but integration was not successful - increase maxsteps
Warning in lsoda(y, times, func, parms, ...) :
  Returning early. Results are accurate, as far as they go
Error: processing vignette 'deSolve.Rnw' failed with diagnostics:
Running ‘texi2dvi’ on ‘deSolve.tex’ failed.
LaTeX errors:
! Undefined control sequence.
<recently read> \Hy@colorlink 
                              
l.117 \begin{document}
                      
! Undefined control sequence.
\close@pdflink ->\Hy@endcolorlink 
                                  \Hy@VerboseLinkStop \pdfendlink 
l.117 \begin{document}
                      
! Undefined control sequence.
<recently read> \Hy@colorlink 
                              
l.117 \begin{document}
                      
! Undefined control sequence.
\close@pdflink ->\Hy@endcolorlink 
                                  \Hy@VerboseLinkStop \pdfendlink 
l.117 \begin{document}
                      
! Undefined control sequence.
<recently read> \Hy@colorlink 
                              
l.117 \begin{document}
                      
! Undefined control sequence.
\close@pdflink ->\Hy@endcolorlink 
                                  \Hy@VerboseLinkStop \pdfendlink 
l.117 \begin{document}
                      
! Undefined control sequence.
<recently read> \Hy@colorlink 
                              
l.117 \begin{document}
                      
! Undefined control sequence.
\close@pdflink ->\Hy@endcolorlink 
                                  \Hy@VerboseLinkStop \pdfendlink 
l.117 \begin{document}
                      
! Undefined control sequence.
<recently read> \Hy@colorlink 
                              
l.117 \begin{document}
                      
! Undefined control sequence.
\close@pdflink ->\Hy@endcolorlink 
                                  \Hy@VerboseLinkStop \pdfendlink 
l.117 \begin{document}
                      
! Undefined control sequence.
<recently read> \Hy@colorlink 
                              
l.117 \begin{document}
                      
! Undefined control sequence.
\close@pdflink ->\Hy@endcolorlink 
                                  \Hy@VerboseLinkStop \pdfendlink 
l.117 \begin{document}
                      
! Undefined control sequence.
<recently read> \Hy@colorlink 
                              
l.117 \begin{document}
                      
! Undefined control sequence.
\close@pdflink ->\Hy@endcolorlink 
                                  \Hy@VerboseLinkStop \pdfendlink 
l.117 \begin{document}
                      
! Undefined control sequence.
<recently read> \Hy@colorlink 
                              
l.117 \begin{document}
                      
! Undefined control sequence.
\close@pdflink ->\Hy@endcolorlink 
                                  \Hy@VerboseLinkStop \pdfendlink 
l.117 \begin{document}
                      
! Undefined control sequence.
<recently read> \Hy@colorlink 
                              
l.117 \begin{document}
                      
! Undefined control sequence.
\close@pdflink ->\Hy@endcolorlink 
                                  \Hy@VerboseLinkStop \pdfendlink 
l.117 \begin{document}
                      
! Undefined control sequence.
<recently read> \Hy@colorlink 
                              
l.117 \begin{document}
                      
! Undefined control sequence.
\close@pdflink ->\Hy@endcolorlink 
                                  \Hy@VerboseLinkStop \pdfendlink 
l.117 \begin{document}
                      
! Undefined control sequence.
<recently read> \Hy@colorlink 
                              
l.117 \begin{document}
                      
! Undefined control sequence.
\close@pdflink ->\Hy@endcolorlink 
                                  \Hy@VerboseLinkStop \pdfendlink 
l.117 \begin{document}
                      
! Undefined control sequence.
<recently read> \Hy@colorlink 
                              
l.117 \begin{document}
                      
! Undefined control sequence.
\close@pdflink ->\Hy@endcolorlink 
                                  \Hy@VerboseLinkStop \pdfendlink 
l.117 \begin{document}
                      
! Undefined control sequence.
<recently read> \Hy@colorlink 
                              
l.117 \begin{document}
                      
! Undefined control sequence.
\close@pdflink ->\Hy@endcolorlink 
                                  \Hy@VerboseLinkStop \pdfendlink 
l.117 \begin{document}
                      
! Undefined control sequence.
<recently read> \Hy@colorlink 
                              
l.117 \begin{document}
                      
! Undefined control sequence.
\close@pdflink ->\Hy@endcolorlink 
                                  \Hy@VerboseLinkStop \pdfendlink 
l.117 \begin{document}
                      
! Undefined control sequence.
<recently read> \Hy@colorlink 
                              
l.117 \begin{document}
                      
! Undefined control sequence.
\close@pdflink ->\Hy@endcolorlink 
                                  \Hy@VerboseLinkStop \pdfendlink 
l.117 \begin{document}
                      
--- failed re-building ‘deSolve.Rnw’

SUMMARY: processing the following files failed:
  ‘compiledCode.Rnw’ ‘deSolve.Rnw’

Error: Vignette re-building failed.
Execution halted