Running 'spelling.R' [0s/1s]
  Running 'testthat.R' [5s/6s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(BaseSet)
  
  Attaching package: 'BaseSet'
  
  The following object is masked from 'package:stats':
  
      filter
  
  The following object is masked from 'package:base':
  
      union
  
  > 
  > test_check("BaseSet")
  -- Warning (test-obo.R:3:5): getOBO works --------------------------------------
  file("") only supports open = "w+" and open = "w+b": using the former
  
  -- ERROR (test-obo.R:3:5): getOBO works ----------------------------------------
  Error: NA/NaN argument
  Backtrace:
      x
   1. \-BaseSet::getOBO(fl) test-obo.R:3:4
  
  -- ERROR (test-tidy.R:4:5): tidy works in GeneSet ------------------------------
  Error: there is no package called 'GSEABase'
  Backtrace:
      x
   1. \-base::loadNamespace(x) test-tidy.R:4:4
   2.   \-base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
   3.     \-base:::withOneRestart(expr, restarts[[1L]])
   4.       \-base:::doWithOneRestart(return(expr), restart)
  
  -- ERROR (test-tidy.R:24:5): tidy works in GeneSetCollection -------------------
  Error: there is no package called 'GSEABase'
  Backtrace:
      x
   1. \-base::loadNamespace(x) test-tidy.R:24:4
   2.   \-base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
   3.     \-base:::withOneRestart(expr, restarts[[1L]])
   4.       \-base:::doWithOneRestart(return(expr), restart)
  
  -- ERROR (test-tidy.R:41:5): tidy works in GeneColorSet ------------------------
  Error: there is no package called 'GSEABase'
  Backtrace:
      x
   1. \-base::library("GSEABase") test-tidy.R:41:4
  
  == testthat results  ===========================================================
  Warning (test-obo.R:3:5): getOBO works
  ERROR (test-obo.R:3:5): getOBO works
  ERROR (test-tidy.R:4:5): tidy works in GeneSet
  ERROR (test-tidy.R:24:5): tidy works in GeneSetCollection
  ERROR (test-tidy.R:41:5): tidy works in GeneColorSet
  
  [ FAIL 4 | WARN 1 | SKIP 0 | PASS 394 ]
  Error: Test failures
  Execution halted