Running ‘testthat.R’ [119s/127s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(lmeInfo)
  > 
  > test_check("lmeInfo")
  ── Skip (test-against-merDeriv.R:123:3): lmeInfo results comparable to merDeriv 
  Reason: Must be some bug in merDeriv?
  
  ── Skip (test-fixed-sigma-models.R:42:3): Results do not depend on order of data
  Reason: On CRAN
  
  ── Skip (test-gls-models.R:150:3): Results do not depend on order of data. ─────
  Reason: On CRAN
  
  ── Warning (test-scdhlm-examples.R:80:3): lmeInfo::g_mlm returns the same result
  'g_REML()' is deprecated and may be removed in a later version of the package. Please use 'g_mlm()' instead.
  
  ── FAILURE (test-scdhlm-examples.R:80:3): lmeInfo::g_mlm returns the same result
  g_lmeInfo$nu not equal to g_scdhlm$nu.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-scdhlm-examples.R:80:3): lmeInfo::g_mlm returns the same result
  g_lmeInfo$kappa not equal to g_scdhlm$kappa.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-scdhlm-examples.R:80:3): lmeInfo::g_mlm returns the same result
  g_lmeInfo$g_AB not equal to g_scdhlm$g_AB.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-scdhlm-examples.R:80:3): lmeInfo::g_mlm returns the same result
  g_lmeInfo$SE_g_AB^2 not equal to g_scdhlm$V_g_AB.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── Warning (test-scdhlm-examples.R:83:3): lmeInfo::g_mlm returns the same result
  'g_REML()' is deprecated and may be removed in a later version of the package. Please use 'g_mlm()' instead.
  
  ── FAILURE (test-scdhlm-examples.R:83:3): lmeInfo::g_mlm returns the same result
  g_lmeInfo$nu not equal to g_scdhlm$nu.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-scdhlm-examples.R:83:3): lmeInfo::g_mlm returns the same result
  g_lmeInfo$kappa not equal to g_scdhlm$kappa.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-scdhlm-examples.R:83:3): lmeInfo::g_mlm returns the same result
  g_lmeInfo$g_AB not equal to g_scdhlm$g_AB.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-scdhlm-examples.R:83:3): lmeInfo::g_mlm returns the same result
  g_lmeInfo$SE_g_AB^2 not equal to g_scdhlm$V_g_AB.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── Warning (test-scdhlm-examples.R:86:3): lmeInfo::g_mlm returns the same result
  'g_REML()' is deprecated and may be removed in a later version of the package. Please use 'g_mlm()' instead.
  
  ── FAILURE (test-scdhlm-examples.R:86:3): lmeInfo::g_mlm returns the same result
  g_lmeInfo$nu not equal to g_scdhlm$nu.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-scdhlm-examples.R:86:3): lmeInfo::g_mlm returns the same result
  g_lmeInfo$kappa not equal to g_scdhlm$kappa.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-scdhlm-examples.R:86:3): lmeInfo::g_mlm returns the same result
  g_lmeInfo$g_AB not equal to g_scdhlm$g_AB.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-scdhlm-examples.R:86:3): lmeInfo::g_mlm returns the same result
  g_lmeInfo$SE_g_AB^2 not equal to g_scdhlm$V_g_AB.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── Warning (test-scdhlm-examples.R:90:3): lmeInfo::g_mlm returns the same result
  'g_REML()' is deprecated and may be removed in a later version of the package. Please use 'g_mlm()' instead.
  
  ── FAILURE (test-scdhlm-examples.R:90:3): lmeInfo::g_mlm returns the same result
  g_lmeInfo$nu not equal to g_scdhlm$nu.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-scdhlm-examples.R:90:3): lmeInfo::g_mlm returns the same result
  g_lmeInfo$kappa not equal to g_scdhlm$kappa.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-scdhlm-examples.R:90:3): lmeInfo::g_mlm returns the same result
  g_lmeInfo$g_AB not equal to g_scdhlm$g_AB.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-scdhlm-examples.R:90:3): lmeInfo::g_mlm returns the same result
  g_lmeInfo$SE_g_AB^2 not equal to g_scdhlm$V_g_AB.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── Warning (test-scdhlm-examples.R:93:3): lmeInfo::g_mlm returns the same result
  'g_REML()' is deprecated and may be removed in a later version of the package. Please use 'g_mlm()' instead.
  
  ── FAILURE (test-scdhlm-examples.R:93:3): lmeInfo::g_mlm returns the same result
  g_lmeInfo$nu not equal to g_scdhlm$nu.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-scdhlm-examples.R:93:3): lmeInfo::g_mlm returns the same result
  g_lmeInfo$kappa not equal to g_scdhlm$kappa.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-scdhlm-examples.R:93:3): lmeInfo::g_mlm returns the same result
  g_lmeInfo$g_AB not equal to g_scdhlm$g_AB.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-scdhlm-examples.R:93:3): lmeInfo::g_mlm returns the same result
  g_lmeInfo$SE_g_AB^2 not equal to g_scdhlm$V_g_AB.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── Warning (test-scdhlm-examples.R:97:3): lmeInfo::g_mlm returns the same result
  'g_REML()' is deprecated and may be removed in a later version of the package. Please use 'g_mlm()' instead.
  
  ── FAILURE (test-scdhlm-examples.R:97:3): lmeInfo::g_mlm returns the same result
  g_lmeInfo$nu not equal to g_scdhlm$nu.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-scdhlm-examples.R:97:3): lmeInfo::g_mlm returns the same result
  g_lmeInfo$kappa not equal to g_scdhlm$kappa.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-scdhlm-examples.R:97:3): lmeInfo::g_mlm returns the same result
  g_lmeInfo$g_AB not equal to g_scdhlm$g_AB.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-scdhlm-examples.R:97:3): lmeInfo::g_mlm returns the same result
  g_lmeInfo$SE_g_AB^2 not equal to g_scdhlm$V_g_AB.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── Warning (test-scdhlm-examples.R:100:3): lmeInfo::g_mlm returns the same resul
  'g_REML()' is deprecated and may be removed in a later version of the package. Please use 'g_mlm()' instead.
  
  ── FAILURE (test-scdhlm-examples.R:100:3): lmeInfo::g_mlm returns the same resul
  g_lmeInfo$nu not equal to g_scdhlm$nu.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-scdhlm-examples.R:100:3): lmeInfo::g_mlm returns the same resul
  g_lmeInfo$kappa not equal to g_scdhlm$kappa.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-scdhlm-examples.R:100:3): lmeInfo::g_mlm returns the same resul
  g_lmeInfo$g_AB not equal to g_scdhlm$g_AB.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-scdhlm-examples.R:100:3): lmeInfo::g_mlm returns the same resul
  g_lmeInfo$SE_g_AB^2 not equal to g_scdhlm$V_g_AB.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── Warning (test-scdhlm-examples.R:103:3): lmeInfo::g_mlm returns the same resul
  'g_REML()' is deprecated and may be removed in a later version of the package. Please use 'g_mlm()' instead.
  
  ── FAILURE (test-scdhlm-examples.R:103:3): lmeInfo::g_mlm returns the same resul
  g_lmeInfo$nu not equal to g_scdhlm$nu.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-scdhlm-examples.R:103:3): lmeInfo::g_mlm returns the same resul
  g_lmeInfo$kappa not equal to g_scdhlm$kappa.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-scdhlm-examples.R:103:3): lmeInfo::g_mlm returns the same resul
  g_lmeInfo$g_AB not equal to g_scdhlm$g_AB.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-scdhlm-examples.R:103:3): lmeInfo::g_mlm returns the same resul
  g_lmeInfo$SE_g_AB^2 not equal to g_scdhlm$V_g_AB.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── Warning (test-scdhlm-examples.R:112:3): lmeInfo::CI_g returns the correct CIs
  'g_REML()' is deprecated and may be removed in a later version of the package. Please use 'g_mlm()' instead.
  
  ── Warning (test-scdhlm-examples.R:114:3): lmeInfo::CI_g returns the correct CIs
  'g_REML()' is deprecated and may be removed in a later version of the package. Please use 'g_mlm()' instead.
  
  ── FAILURE (test-scdhlm-examples.R:133:3): lmeInfo::CI_g returns the correct CIs
  `appro_CI4_lmeInfo` not equal to `appro_CI4_scdhlm`.
  2/2 mismatches (average diff: 0.107)
  [1] -1.951 - -2.01609 ==  0.0652
  [2] -0.159 - -0.00935 == -0.1492
  
  ── FAILURE (test-scdhlm-examples.R:134:3): lmeInfo::CI_g returns the correct CIs
  `appro_CI5_lmeInfo` not equal to `appro_CI5_scdhlm`.
  2/2 mismatches (average diff: 0.447)
  [1] -2.9742 - -3.290 ==  0.315
  [2]  0.0594 -  0.637 == -0.578
  
  ── Skip (test-three-level-models.R:170:3): Results do not depend on order of dat
  Reason: On CRAN
  
  ── Skip (test-three-level-models.R:207:3): Three-level models for Bryant2018 pas
  Reason: Trim down the unit tests for three level models.
  
  ── Warning (test-two-level-models.R:164:3): lmeinfo::g_mlm returns the same resu
  'g_REML()' is deprecated and may be removed in a later version of the package. Please use 'g_mlm()' instead.
  
  ── FAILURE (test-two-level-models.R:164:3): lmeinfo::g_mlm returns the same resu
  g_lmeInfo$nu not equal to g_scdhlm$nu.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-two-level-models.R:164:3): lmeinfo::g_mlm returns the same resu
  g_lmeInfo$kappa not equal to g_scdhlm$kappa.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-two-level-models.R:164:3): lmeinfo::g_mlm returns the same resu
  g_lmeInfo$g_AB not equal to g_scdhlm$g_AB.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── FAILURE (test-two-level-models.R:164:3): lmeinfo::g_mlm returns the same resu
  g_lmeInfo$SE_g_AB^2 not equal to g_scdhlm$V_g_AB.
  Attributes: < Modes: list, NULL >
  Attributes: < Lengths: 1, 0 >
  Attributes: < names for target but not for current >
  Attributes: < current is not list-like >
  
  ── Skip (test-two-level-models.R:171:3): Results do not depend on order of data.
  Reason: On CRAN
  
  ── Skip (test-variance-structures.R:64:3): Results do not depend on order of dat
  Reason: On CRAN
  
  ── Skipped tests  ──────────────────────────────────────────────────────────────
  ● Must be some bug in merDeriv? (1)
  ● On CRAN (5)
  ● Trim down the unit tests for three level models. (1)
  
  ══ testthat results  ═══════════════════════════════════════════════════════════
  Warning (test-scdhlm-examples.R:80:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:80:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:80:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:80:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:80:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  Warning (test-scdhlm-examples.R:83:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:83:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:83:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:83:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:83:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  Warning (test-scdhlm-examples.R:86:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:86:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:86:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:86:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:86:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  Warning (test-scdhlm-examples.R:90:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:90:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:90:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:90:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:90:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  Warning (test-scdhlm-examples.R:93:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:93:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:93:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:93:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:93:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  Warning (test-scdhlm-examples.R:97:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:97:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:97:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:97:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:97:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  Warning (test-scdhlm-examples.R:100:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:100:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:100:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:100:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:100:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  Warning (test-scdhlm-examples.R:103:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:103:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:103:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:103:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-scdhlm-examples.R:103:3): lmeInfo::g_mlm returns the same result as scdhlm::g_REML.
  Warning (test-scdhlm-examples.R:112:3): lmeInfo::CI_g returns the correct CIs for Schutte examples.
  Warning (test-scdhlm-examples.R:114:3): lmeInfo::CI_g returns the correct CIs for Schutte examples.
  FAILURE (test-scdhlm-examples.R:133:3): lmeInfo::CI_g returns the correct CIs for Schutte examples.
  FAILURE (test-scdhlm-examples.R:134:3): lmeInfo::CI_g returns the correct CIs for Schutte examples.
  Warning (test-two-level-models.R:164:3): lmeinfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-two-level-models.R:164:3): lmeinfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-two-level-models.R:164:3): lmeinfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-two-level-models.R:164:3): lmeinfo::g_mlm returns the same result as scdhlm::g_REML.
  FAILURE (test-two-level-models.R:164:3): lmeinfo::g_mlm returns the same result as scdhlm::g_REML.
  
  [ FAIL 38 | WARN 11 | SKIP 7 | PASS 1240 ]
  Error: Test failures
  Execution halted