Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/anomalize.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/anomaly.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/AntAngioCOOL.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/antaresViz.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/AnthropMMD.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/Anthropometry.Rcheck/00install.out' for details.
aw_map: no visible global function definition for 'browseURL'
Undefined global functions or variables:
  browseURL
Consider adding
  importFrom("utils", "browseURL")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/anyflights.Rcheck/00install.out' for details.
'library' or 'require' call to 'boot' in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
varbin: no visible global function definition for 'boot'
Undefined global functions or variables:
  boot
Packages in Depends field not imported from:
  'boot' 'lme4'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/apa.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/apaTables.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/apaText.Rcheck/00install.out' for details.
installed size is 73.7Mb
  sub-directories of 1Mb or more:
    gdal   3.8Mb
    libs  69.5Mb
Running examples in 'apexcharter-Ex.R' failed
The error most likely occurred in:

> ### Name: apex
> ### Title: Quick ApexChart
> ### Aliases: apex
> 
> ### ** Examples
> 
> library(ggplot2)
> library(dplyr)
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Error(s) in re-building vignettes:
--- re-building 'apexcharter.Rmd' using rmarkdown
Quitting from lines 25-29 (apexcharter.Rmd) 
Error: processing vignette 'apexcharter.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'apexcharter.Rmd'

--- re-building 'chart-options.Rmd' using rmarkdown
Quitting from lines 23-28 (chart-options.Rmd) 
Error: processing vignette 'chart-options.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'chart-options.Rmd'

--- re-building 'shiny-integration.Rmd' using rmarkdown
--- finished re-building 'shiny-integration.Rmd'

--- re-building 'spark-box.Rmd' using rmarkdown
--- finished re-building 'spark-box.Rmd'

--- re-building 'sync-charts.Rmd' using rmarkdown
--- finished re-building 'sync-charts.Rmd'

SUMMARY: processing the following files failed:
  'apexcharter.Rmd' 'chart-options.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/apex.Rcheck/00install.out' for details.
Running examples in 'aplot-Ex.R' failed
The error most likely occurred in:

> ### Name: insert_left
> ### Title: plot-insertion
> ### Aliases: insert_left insert_right insert_top insert_bottom
> 
> ### ** Examples
> 
> library(ggplot2)
> library(aplot)
> 
> p <- ggplot(mtcars, aes(mpg, disp)) + geom_point()
> p2 <- ggplot(mtcars, aes(mpg)) + 
+     geom_density(fill='steelblue', alpha=.5) + 
+         ggtree::theme_dendrogram()
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: :: ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
TSPM: no visible global function definition for 'glm'
TSPM: no visible binding for global variable 'poisson'
TSPM: no visible global function definition for 'hatvalues'
TSPM: no visible global function definition for 'residuals'
TSPM: no visible global function definition for 'deviance'
TSPM: no visible global function definition for 'qchisq'
TSPM: no visible global function definition for 'qf'
TSPM: no visible global function definition for 'pf'
TSPM: no visible global function definition for 'pchisq'
TSPM: no visible global function definition for 'p.adjust'
norm.inttable: no visible global function definition for 'median'
norm.inttable : <anonymous>: no visible global function definition for
  'quantile'
saint_permF: no visible global function definition for 'read.table'
saint_permF: no visible global function definition for 'write.table'
saint_permF: no visible global function definition for 'write.csv2'
tspm_apms: no visible global function definition for 'read.table'
varFilter : <anonymous>: no visible global function definition for
  'median'
varFilter: no visible global function definition for 'median'
varFilter: no visible global function definition for 'quantile'
Undefined global functions or variables:
  deviance glm hatvalues median p.adjust pchisq pf poisson qchisq qf
  quantile read.table residuals write.csv2 write.table
Consider adding
  importFrom("stats", "deviance", "glm", "hatvalues", "median",
             "p.adjust", "pchisq", "pf", "poisson", "qchisq", "qf",
             "quantile", "residuals")
  importFrom("utils", "read.table", "write.csv2", "write.table")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
Package in Depends field not imported from: 'MASS'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
apple: no visible global function definition for 'ginv'
apple: no visible global function definition for 'runif'
deri: no visible global function definition for 'ginv'
logit: no visible global function definition for 'qlogis'
plot.apple: no visible global function definition for 'matplot'
plot.apple: no visible global function definition for 'lines'
y.app: no visible global function definition for 'ginv'
Undefined global functions or variables:
  ginv lines matplot qlogis runif
Consider adding
  importFrom("graphics", "lines", "matplot")
  importFrom("stats", "qlogis", "runif")
to your NAMESPACE file.
prepare_Rd: plot.apple.Rd:51-53: Dropping empty section \examples
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/applicable.Rcheck/00install.out' for details.
Running examples in 'AppliedPredictiveModeling-Ex.R' failed
The error most likely occurred in:

> ### Name: concrete
> ### Title: Compressive Strength of Concrete from Yeh (1998)
> ### Aliases: concrete mixtures
> ### Keywords: datasets
> 
> ### ** Examples
> 
> data(concrete)
> 
> library(caret)
Loading required package: lattice
Loading required package: ggplot2
Error: package or namespace load failed for 'caret' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/apricom.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
runAPSIM: warning in scan(reports_file[i], "", sep = "", skip =
  length(temp), nline = 1): partial argument match of 'nline' to
  'nlines'
runAPSIM: no visible global function definition for 'write.table'
runAPSIM: no visible global function definition for 'read.table'
Undefined global functions or variables:
  read.table write.table
Consider adding
  importFrom("utils", "read.table", "write.table")
to your NAMESPACE file.
installed size is  6.4Mb
  sub-directories of 1Mb or more:
    extdata   5.8Mb
Running 'test_apsim_swim.R' [1s]
  Running 'test_apsimx_factorial.R' [1s]
  Running 'test_classic_examples.r' [1s]
  Running 'test_edit.R' [1s]
  Running 'test_edit_apsim_replace_soil_profile.R' [1s]
  Running 'test_edit_apsim_xml.R' [1s]
  Running 'test_edit_apsimx_replacement.R' [1s]
  Running 'test_edit_batch.R' [1s]
  Running 'test_examples.R' [1s]
  Running 'test_get_daymet_apsim_met.R' [1s]
  Running 'test_inspect.R' [1s]
  Running 'test_read_apsim.R' [1s]
  Running 'test_read_apsim_met.R' [1s]
  Running 'test_replacements.R' [1s]
  Running 'test_ssurgo2sp.R' [1s]
  Running 'test_vignette.R' [1s]
Running the tests in 'tests/test_get_daymet_apsim_met.R' failed.
Complete output:
  > ## Testing the get_daymet_apsim_met function
  > ## Note (2020-02-09)
  > ## I've ran this test several times now on Mac and Windows
  > ## I won't run it again until it is needed
  > ## However, note that the source of weather data can
  > ## have a large impact on final yield estimates
  > ## the difference is 171.1547 g per meter squared
  > ## with higher values for power over daymet
  > ## Note (2020-06-15): This takes for ever, I'm not running it for a while
  > library(FedData)
  Loading required package: sp
  Error: package or namespace load failed for 'FedData' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Execution halted
Package in Depends field not imported from: 'methods'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Running examples in 'apyramid-Ex.R' failed
The error most likely occurred in:

> ### Name: age_pyramid
> ### Title: Plot a population pyramid (age-sex) from a dataframe.
> ### Aliases: age_pyramid
> 
> ### ** Examples
> 
> 
> library(ggplot2)
> old <- theme_set(theme_classic(base_size = 18))
> 
> # with pre-computed data ----------------------------------------------------
> # 2018/2008 US census data by age and gender
> data(us_2018)
> data(us_2008)
> age_pyramid(us_2018, age_group = age, split_by = gender, count = count)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: age_pyramid ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'intro.Rmd' using rmarkdown
Quitting from lines 8-20 (./../man/rmdhunks/linelist-example.Rmd) 
Quitting from lines 46-47 (./../man/rmdhunks/linelist-example.Rmd) 
Error: processing vignette 'intro.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'intro.Rmd'

SUMMARY: processing the following file failed:
  'intro.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/AQuadtree.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ArchaeoChron.Rcheck/00install.out' for details.
Running examples in 'ArchaeoPhases-Ex.R' failed
The error most likely occurred in:

> ### Name: MultiDatesPlot
> ### Title: Plot of the endpoints of credible intervals or HPD intervals of
> ###   a series of dates
> ### Aliases: MultiDatesPlot
> ### Keywords: credible interval highest posterior density regions
> 
> ### ** Examples
> 
>   data(Events)
>   MultiDatesPlot(Events, c(2,4,3), level = 0.95, intervals ="CI", title = "Plot of CI intervals")
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: MultiDatesPlot ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'GroupsOfDates.Rmd' using rmarkdown
Loading required package: coda
Loading required package: hdrcde
This is hdrcde 3.3
--- finished re-building 'GroupsOfDates.Rmd'

--- re-building 'Introduction.Rmd' using rmarkdown
Loading required package: coda
Loading required package: hdrcde
This is hdrcde 3.3
--- finished re-building 'Introduction.Rmd'

--- re-building 'SeriesOfDates.Rmd' using rmarkdown
Loading required package: coda
Loading required package: hdrcde
This is hdrcde 3.3
Quitting from lines 59-61 (SeriesOfDates.Rmd) 
Error: processing vignette 'SeriesOfDates.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'SeriesOfDates.Rmd'

SUMMARY: processing the following file failed:
  'SeriesOfDates.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/arcos.Rcheck/00install.out' for details.
'library' or 'require' call to 'stats' in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
ardec: no visible global function definition for 'filter'
ardec.lm: no visible global function definition for 'ar'
ardec.lm: no visible global function definition for 'lm'
Undefined global functions or variables:
  ar filter lm
Consider adding
  importFrom("stats", "ar", "filter", "lm")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ARDL.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/arealDB.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/areal.Rcheck/00install.out' for details.
Running examples in 'arena2r-Ex.R' failed
The error most likely occurred in:

> ### Name: get_simulation_results
> ### Title: Get Results from Arena CSV Files
> ### Aliases: get_simulation_results
> 
> ### ** Examples
> 
> # Define de path where your csv files are:
> path <- system.file("extdata", package = "arena2r")
> simulation_results = get_simulation_results(path)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: get_simulation_results ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Running 'testthat.R' [2s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(arena2r)
  > 
  > test_check("arena2r")
  -- 1. Error: (unknown) (@tests_arena2r.R#9)  -----------------------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. arena2r::get_simulation_results(my_path)
    2. tidyr::gather
    3. base::getExportedValue(pkg, name)
    4. base::asNamespace(ns)
    5. base::getNamespace(ns)
    6. base::loadNamespace(name)
    9. base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
   10. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 0 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: (unknown) (@tests_arena2r.R#9) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'arena2r-vignette.Rmd' using rmarkdown
Quitting from lines 79-84 (arena2r-vignette.Rmd) 
Error: processing vignette 'arena2r-vignette.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'arena2r-vignette.Rmd'

SUMMARY: processing the following file failed:
  'arena2r-vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'arenar-Ex.R' failed
The error most likely occurred in:

> ### Name: create_arena
> ### Title: Creates arena object
> ### Aliases: create_arena
> 
> ### ** Examples
> 
> library("DALEX")
Welcome to DALEX (version: 1.3.1.1).
Find examples and detailed introduction at: https://pbiecek.github.io/ema/
Additional features will be available after installation of: ggpubr.
Use 'install_dependencies()' to get all suggested dependencies
> library("arenar")
> library("dplyr", quietly=TRUE, warn.conflicts = FALSE)
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ariExtra.Rcheck/00install.out' for details.
Package suggested but not available for checking: 'MonetDBLite'
Running 'spelling.R' [0s]
  Running 'testthat.R' [3s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(arkdb)
  > 
  > test_check("arkdb")
  -- 1. Error: (unknown) (@test-arkdb.R#11)  -------------------------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. dbplyr::nycflights13_sqlite
   2. base::getExportedValue(pkg, name)
   3. base::asNamespace(ns)
   4. base::getNamespace(ns)
   5. base::loadNamespace(name)
   8. base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
   9. base::library.dynam(lib, package, package.lib)
  
  -- 2. Error: we can handle cases overwriting a table, with a warning (@test-erro
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. dplyr::src_sqlite
   2. base::getExportedValue(pkg, name)
   3. base::asNamespace(ns)
   4. base::getNamespace(ns)
   5. base::loadNamespace(name)
   6. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 14 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 2 ]
  1. Error: (unknown) (@test-arkdb.R#11) 
  2. Error: we can handle cases overwriting a table, with a warning (@test-errors.R#38) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'arkdb.Rmd' using rmarkdown
Quitting from lines 45-52 (arkdb.Rmd) 
Error: processing vignette 'arkdb.Rmd' failed with diagnostics:
package or namespace load failed for 'dbplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'arkdb.Rmd'

SUMMARY: processing the following file failed:
  'arkdb.Rmd'

Error: Vignette re-building failed.
Execution halted
Malformed Description field: should contain one or more complete sentences.
installed size is  5.2Mb
  sub-directories of 1Mb or more:
    R      2.3Mb
    help   1.1Mb
Packages suggested but not available for checking:
  'sfit', 'expectile', 'HaarSeg', 'mpcbs'
binarize.array: no visible binding for global variable 'sd'
mskmeans: no visible global function definition for 'kmeans'
Undefined global functions or variables:
  kmeans sd
Consider adding
  importFrom("stats", "kmeans", "sd")
to your NAMESPACE file.
installed size is 24.0Mb
  sub-directories of 1Mb or more:
    R      3.2Mb
    libs  20.3Mb
Running examples in 'arsenal-Ex.R' failed
The error most likely occurred in:

> ### Name: modelsum
> ### Title: Fit models over each of a set of independent variables with a
> ###   response variable
> ### Aliases: modelsum
> 
> ### ** Examples
> 
> 
> data(mockstudy)
> 
> tab1 <- modelsum(bmi ~ sex + age, data = mockstudy)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: modelsum ... loadNamespace -> namespaceImport -> loadNamespace -> library.dynam
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/arse.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ARTool.Rcheck/00install.out' for details.
installed size is  6.9Mb
  sub-directories of 1Mb or more:
    extdata   3.7Mb
    libs      2.1Mb
installed size is 26.0Mb
  sub-directories of 1Mb or more:
    bin   22.9Mb
    misc   2.1Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/arulesViz.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/aslib.Rcheck/00install.out' for details.
'library' or 'require' calls to packages already attached by Depends:
  'Hmisc' 'splancs'
  Please remove these calls from your code.
Packages in Depends field not imported from:
  'Hmisc' 'shapefiles' 'splancs'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
ASP.Score: no visible global function definition for 'pnorm'
Graphs.Bayesian: no visible global function definition for 'dev.new'
colorhex: no visible global function definition for 'gray'
colorhex: no visible global function definition for 'rgb'
Undefined global functions or variables:
  dev.new gray pnorm rgb
Consider adding
  importFrom("grDevices", "dev.new", "gray", "rgb")
  importFrom("stats", "pnorm")
to your NAMESPACE file.
Package which this enhances but not available for checking: 'asreml'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/asremlPlus.Rcheck/00install.out' for details.
Running examples in 'assertr-Ex.R' failed
The error most likely occurred in:

> ### Name: assert
> ### Title: Raises error if predicate is FALSE in any columns selected
> ### Aliases: assert assert_
> 
> ### ** Examples
> 
> 
> # returns mtcars
> assert(mtcars, not_na, vs)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: assert ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'assertr.Rmd' using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Quitting from lines 57-63 (assertr.Rmd) 
Error: processing vignette 'assertr.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'assertr.Rmd'

SUMMARY: processing the following file failed:
  'assertr.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/assignPOP.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ASSISTant.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
Package in Depends field not imported from: 'mvtnorm'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
CALPHA: no visible global function definition for 'dbinom'
CALPHA: no visible global function definition for 'pchisq'
CAST: no visible global function definition for 'fisher.test'
CAST: no visible global function definition for 'chisq.test'
CMC: no visible global function definition for 'pf'
MULTI: no visible global function definition for 'complete.cases'
RVT1: no visible global function definition for 'pchisq'
RVT2: no visible global function definition for 'pchisq'
RWAS: no visible global function definition for 'pnorm'
SKAT: no visible global function definition for 'dbeta'
SKAT: no visible global function definition for 'pchisq'
TTEST: no visible global function definition for 'complete.cases'
TTEST: no visible global function definition for 'pf'
WST: no visible global function definition for 'mvfft'
WST: no visible global function definition for 'pnorm'
my_cmc_method: no visible global function definition for
  'complete.cases'
my_getUV: no visible global function definition for 'complete.cases'
my_orwss_method: no visible global function definition for 'sd'
my_rarecov_method: no visible global function definition for
  'chisq.test'
my_rbt_method: no visible global function definition for 'ppois'
my_score_method: no visible global function definition for 'pchisq'
my_ssu_method: no visible global function definition for 'pchisq'
my_ssuw_method: no visible global function definition for 'pchisq'
my_sum_method: no visible global function definition for 'pchisq'
my_uminp_method: no visible global function definition for 'pchisq'
my_uminp_method: no visible global function definition for 'pmvnorm'
Undefined global functions or variables:
  chisq.test complete.cases dbeta dbinom fisher.test mvfft pchisq pf
  pmvnorm pnorm ppois sd
Consider adding
  importFrom("stats", "chisq.test", "complete.cases", "dbeta", "dbinom",
             "fisher.test", "mvfft", "pchisq", "pf", "pnorm", "ppois",
             "sd")
to your NAMESPACE file.
beamDiskOverlap: no visible global function definition for 'integrate'
Undefined global functions or variables:
  integrate
Consider adding
  importFrom("stats", "integrate")
to your NAMESPACE file.
fm_unred: no visible global function definition for 'spline'
galage: no visible global function definition for 'integrate'
lumdist: no visible global function definition for 'integrate'
Undefined global functions or variables:
  integrate spline
Consider adding
  importFrom("stats", "integrate", "spline")
to your NAMESPACE file.
VPC.graph : findQuantile: no visible global function definition for
  'quantile'
VPC.graph : findQuantileCI : <anonymous>: no visible global function
  definition for 'quantile'
asVPC.binW: no visible global function definition for 'median'
asVPC.binW : <anonymous>: no visible global function definition for
  'quantile'
asVPC.binW: no visible global function definition for 'quantile'
asVPC.distanceW: no visible global function definition for 'median'
asVPC.distanceW : <anonymous>: no visible global function definition
  for 'quantile'
asVPC.distanceW: no visible global function definition for 'quantile'
makeCOVbin: no visible global function definition for 'quantile'
makeCOVbin: no visible global function definition for 'median'
read_Simdata: no visible global function definition for 'read.table'
Undefined global functions or variables:
  median quantile read.table
Consider adding
  importFrom("stats", "median", "quantile")
  importFrom("utils", "read.table")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/asymmetry.Rcheck/00install.out' for details.
Running examples in 'atable-Ex.R' failed
The error most likely occurred in:

> ### Name: atable
> ### Title: Create Tables for Reporting of Clinical Trials
> ### Aliases: atable atable.data.frame atable.formula
> 
> ### ** Examples
> 
> # See vignette for more examples:
> # utils::vignette('atable_usage', package = 'atable')
> 
> # Analyse datasets::ToothGrowth:
> # Length of tooth for each dose level and delivery method:
> atable::atable(datasets::ToothGrowth,
+   target_cols = 'len',
+   group_col = 'supp',
+   split_cols = 'dose',
+   format_to = 'Word')
Warning in stats::ks.test(x, y, alternative = c("two.sided"), ...) :
  cannot compute exact p-value with ties
Warning in stats::ks.test(x, y, alternative = c("two.sided"), ...) :
  cannot compute exact p-value with ties
Warning in stats::ks.test(x, y, alternative = c("two.sided"), ...) :
  cannot compute exact p-value with ties
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: <Anonymous> ... loadNamespace -> namespaceImport -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'atable_usage.rnw' using knitr
Loading required package: knitr
Loading required package: Hmisc
Loading required package: lattice
Loading required package: survival
Loading required package: Formula
Loading required package: ggplot2

Attaching package: 'Hmisc'

The following objects are masked from 'package:base':

    format.pval, units

Loading required package: officer
Loading required package: flextable
Loading required package: atable
Warning in stats::ks.test(x, y, alternative = c("two.sided"), ...) :
  cannot compute exact p-value with ties
Warning in stats::ks.test(x, y, alternative = c("two.sided"), ...) :
  cannot compute exact p-value with ties
Warning in stats::ks.test(x, y, alternative = c("two.sided"), ...) :
  cannot compute exact p-value with ties
Quitting from lines 90-107 (atable_usage.rnw) 
Error: processing vignette 'atable_usage.rnw' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'atable_usage.rnw'

SUMMARY: processing the following file failed:
  'atable_usage.rnw'

Error: Vignette re-building failed.
Execution halted
get.est.ATT: no visible global function definition for 'tail'
get.est.MT: no visible global function definition for 'tail'
get.est.simple: no visible global function definition for 'tail'
newton.r: no visible global function definition for 'tail'
plot.ATE: no visible global function definition for 'par'
plot.ATE: no visible global function definition for 'axis'
plot.ATE: no visible global function definition for 'abline'
plot.ATE: no visible global function definition for 'lines'
plot.ATE: no visible global function definition for 'legend'
plot.ATE: no visible global function definition for 'points'
print.summary.ATE: no visible global function definition for
  'printCoefmat'
summary.ATE: no visible global function definition for 'qnorm'
summary.ATE: no visible global function definition for 'pnorm'
Undefined global functions or variables:
  abline axis legend lines par pnorm points printCoefmat qnorm tail
Consider adding
  importFrom("graphics", "abline", "axis", "legend", "lines", "par",
             "points")
  importFrom("stats", "pnorm", "printCoefmat", "qnorm")
  importFrom("utils", "tail")
to your NAMESPACE file.
atmcmc : rmvtnorm: no visible global function definition for 'rnorm'
atmcmc: no visible global function definition for 'rnorm'
atmcmc: no visible global function definition for 'runif'
atmcmc: no visible global function definition for 'par'
atmcmc: no visible global function definition for 'lm'
atmcmc: no visible global function definition for 'lines'
atmcmc: no visible global function definition for 'var'
atmcmc: no visible global function definition for 'cov'
atmcmc: no visible global function definition for 'quantile'
atmcmc: no visible global function definition for 'sd'
plotmcmc: no visible global function definition for 'pdf'
plotmcmc: no visible global function definition for 'par'
plotmcmc: no visible global function definition for 'dev.new'
plotmcmc: no visible global function definition for 'png'
plotmcmc: no visible global function definition for 'hist'
plotmcmc: no visible global function definition for 'dev.off'
plotmcmc: no visible global function definition for 'lines'
Undefined global functions or variables:
  cov dev.new dev.off hist lines lm par pdf png quantile rnorm runif sd
  var
Consider adding
  importFrom("grDevices", "dev.new", "dev.off", "pdf", "png")
  importFrom("graphics", "hist", "lines", "par")
  importFrom("stats", "cov", "lm", "quantile", "rnorm", "runif", "sd",
             "var")
to your NAMESPACE file.
Found the following significant warnings:
  Warning: namespace 'dplyr' is not available and has been replaced
See 'd:/Rcompile/CRANpkg/local/4.0/ATmet.Rcheck/00install.out' for details.
PlotAtm.lin : scale_image: no visible global function definition for
  'heat.colors'
PlotAtm.lin : scale_image: no visible global function definition for
  'par'
PlotAtm.lin : scale_image: no visible global function definition for
  'sd'
PlotAtm.lin : scale_image: no visible global function definition for
  'approx'
PlotAtm.lin : scale_image: no visible global function definition for
  'image'
PlotAtm.lin : scale_image: no visible global function definition for
  'axis'
PlotAtm.lin : scale_image: no visible global function definition for
  'mtext'
PlotAtm.lin: no visible global function definition for 'arrows'
PlotAtm.lin: no visible global function definition for 'text'
PlotAtm.lin: no visible global function definition for 'polygon'
sky.colors: no visible global function definition for 'rgb'
Undefined global functions or variables:
  approx arrows axis heat.colors image mtext par polygon rgb sd text
Consider adding
  importFrom("grDevices", "heat.colors", "rgb")
  importFrom("graphics", "arrows", "axis", "image", "mtext", "par",
             "polygon", "text")
  importFrom("stats", "approx", "sd")
to your NAMESPACE file.
installed size is  9.7Mb
  sub-directories of 1Mb or more:
    data   9.6Mb
Malformed Title field: should not end in a period.
plot.AUC: no visible global function definition for 'lines'
Undefined global functions or variables:
  lines
Consider adding
  importFrom("graphics", "lines")
to your NAMESPACE file.
AUCRFcv: no visible global function definition for 'predict'
plot.AUCRF: no visible global function definition for 'par'
plot.AUCRF: no visible global function definition for 'dotchart'
plot.AUCRF: no visible global function definition for 'title'
plot.AUCRF: no visible global function definition for 'text'
Undefined global functions or variables:
  dotchart par predict text title
Consider adding
  importFrom("graphics", "dotchart", "par", "text", "title")
  importFrom("stats", "predict")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/auctestr.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
Packages in Depends field not imported from:
  'RJSONIO' 'hexbin' 'plotrix'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
audioHist: no visible global function definition for 'hist'
audioHist: no visible global function definition for 'rescale'
audioHist: no visible global function definition for 'toJSON'
audioScatter: no visible binding for global variable 'formula'
audioScatter: no visible global function definition for 'hexbinplot'
audioScatter: no visible global function definition for 'cor'
audioScatter: no visible global function definition for 'toJSON'
audioSplom: no visible global function definition for 'hexplom'
audioSplom: no visible binding for global variable 'BTY'
audioSplom: no visible binding for global variable 'panel.hexboxplot'
audioSplom: no visible global function definition for 'combn'
audioSplom : <anonymous>: no visible global function definition for
  'cor'
audioSplom : <anonymous>: no visible global function definition for
  'toJSON'
audiolyzRcheck: no visible global function definition for
  'download.file'
audiolyzRcheck: no visible global function definition for 'unzip'
matricize: no visible global function definition for 'hexbin'
panel.audiolyzR: no visible global function definition for
  'panel.hexbinplot'
Undefined global functions or variables:
  BTY combn cor download.file formula hexbin hexbinplot hexplom hist
  panel.hexbinplot panel.hexboxplot rescale toJSON unzip
Consider adding
  importFrom("graphics", "hist")
  importFrom("stats", "cor", "formula")
  importFrom("utils", "combn", "download.file", "unzip")
to your NAMESPACE file.
Found the following significant warnings:
  wmm.c:428:2: warning: initialization of 'struct audio_instance * (*)(struct SEXPREC *, float,  int)' from incompatible pointer type 'wmm_instance_t * (*)(struct SEXPREC *, float,  int)' {aka 'struct wmm_instance * (*)(struct SEXPREC *, float,  int)'} [-Wincompatible-pointer-types]
  wmm.c:429:2: warning: initialization of 'struct audio_instance * (*)(struct SEXPREC *, float,  int,  int)' from incompatible pointer type 'wmm_instance_t * (*)(struct SEXPREC *, float,  int,  int)' {aka 'struct wmm_instance * (*)(struct SEXPREC *, float,  int,  int)'} [-Wincompatible-pointer-types]
See 'd:/Rcompile/CRANpkg/local/4.0/audio.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
simulateD: no visible global function definition for 'rgamma'
simulateT: no visible global function definition for 'runif'
simulateT: no visible global function definition for 'rbeta'
simulateT: no visible global function definition for 'rbinom'
Undefined global functions or variables:
  rbeta rbinom rgamma runif
Consider adding
  importFrom("stats", "rbeta", "rbinom", "rgamma", "runif")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/augmentedRCBD.Rcheck/00install.out' for details.
Running examples in 'auk-Ex.R' failed
The error most likely occurred in:

> ### Name: auk_bcr
> ### Title: Filter the eBird data by Bird Conservation Region
> ### Aliases: auk_bcr
> 
> ### ** Examples
> 
> # bcr codes can be looked up in bcr_codes
> dplyr::filter(bcr_codes, bcr_name == "Central Hardwoods")
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: :: ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'auk.Rmd' using rmarkdown
Quitting from lines 13-20 (auk.Rmd) 
Error: processing vignette 'auk.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'auk.Rmd'

--- re-building 'development.Rmd' using rmarkdown
--- finished re-building 'development.Rmd'

SUMMARY: processing the following file failed:
  'auk.Rmd'

Error: Vignette re-building failed.
Execution halted
Package which this enhances but not available for checking: 'rPython'
Running examples in 'aurelius-Ex.R' failed
The error most likely occurred in:

> ### Name: extract_params.knn3
> ### Title: extract_params.knn3
> ### Aliases: extract_params.knn3
> 
> ### ** Examples
> 
> iris2 <- iris
> colnames(iris2) <- gsub('\\.', '_', colnames(iris2))
> model <- caret::knn3(Species ~ ., iris2)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: :: ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/AUtests.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/autocogs.Rcheck/00install.out' for details.
Error(s) in re-building vignettes:
--- re-building 'autoimage.Rmd' using rmarkdown
--- finished re-building 'autoimage.Rmd'

--- re-building 'autopoints.Rmd' using rmarkdown
--- finished re-building 'autopoints.Rmd'

--- re-building 'ggplot2-comparison.Rmd' using rmarkdown
Quitting from lines 185-188 (ggplot2-comparison.Rmd) 
Error: processing vignette 'ggplot2-comparison.Rmd' failed with diagnostics:
package or namespace load failed for 'broom' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'ggplot2-comparison.Rmd'

SUMMARY: processing the following file failed:
  'ggplot2-comparison.Rmd'

Error: Vignette re-building failed.
Execution halted
'library' or 'require' calls in package code:
  'ggplot2' 'gpclib' 'maptools'
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/autoplotly.Rcheck/00install.out' for details.
gLog.ep: no visible global function definition for 'quantile'
gedestp: no visible global function definition for 'na.omit'
gedestp: no visible global function definition for 'optim'
gets.mean: no visible global function definition for 'start'
gets.mean: no visible global function definition for 'end'
gets.mean: no visible global function definition for 'window'
gets.mean: no visible global function definition for 'pt'
gets.mean: no visible global function definition for 'Box.test'
gets.mean: no visible global function definition for 'pchisq'
gets.vol: no visible global function definition for 'start'
gets.vol: no visible global function definition for 'end'
gets.vol: no visible global function definition for 'window'
gets.vol: no visible global function definition for 'pt'
gets.vol: no visible global function definition for 'Box.test'
gets.vol: no visible global function definition for 'pchisq'
jb.test: no visible global function definition for 'pchisq'
skewness.test: no visible global function definition for 'pchisq'
sm: no visible global function definition for 'start'
sm: no visible global function definition for 'end'
sm: no visible global function definition for 'window'
sm: no visible global function definition for 'pt'
sm: no visible global function definition for 'pchisq'
sm: no visible global function definition for 'Box.test'
Undefined global functions or variables:
  Box.test end na.omit optim pchisq pt quantile start window
Consider adding
  importFrom("stats", "Box.test", "end", "na.omit", "optim", "pchisq",
             "pt", "quantile", "start", "window")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/AutoStepwiseGLM.Rcheck/00install.out' for details.
Error(s) in re-building vignettes:
--- re-building 'finding-thresholds.Rmd' using rmarkdown
Quitting from lines 43-47 (finding-thresholds.Rmd) 
Error: processing vignette 'finding-thresholds.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'finding-thresholds.Rmd'

--- re-building 'thresholding-image-stacks.Rmd' using rmarkdown
Quitting from lines 44-47 (thresholding-image-stacks.Rmd) 
Error: processing vignette 'thresholding-image-stacks.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'thresholding-image-stacks.Rmd'

--- re-building 'thresholding-images.Rmd' using rmarkdown
Quitting from lines 39-43 (thresholding-images.Rmd) 
Error: processing vignette 'thresholding-images.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'thresholding-images.Rmd'

SUMMARY: processing the following files failed:
  'finding-thresholds.Rmd' 'thresholding-image-stacks.Rmd'
  'thresholding-images.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'autoTS-Ex.R' failed
The error most likely occurred in:

> ### Name: complete.ts
> ### Title: Creates additional dates and values when NA where removed and
> ###   the TS is not complete
> ### Aliases: complete.ts
> 
> ### ** Examples
> 
> library(lubridate)

Attaching package: 'lubridate'

The following objects are masked from 'package:base':

    date, intersect, setdiff, union

> library(dplyr)
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Error(s) in re-building vignettes:
--- re-building 'autoTS_vignette.Rmd' using rmarkdown
Quitting from lines 15-20 (autoTS_vignette.Rmd) 
Error: processing vignette 'autoTS_vignette.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'autoTS_vignette.Rmd'

SUMMARY: processing the following file failed:
  'autoTS_vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
Package suggested but not available for checking: 'BiocInstaller'
Running examples in 'available-Ex.R' failed
The error most likely occurred in:

> ### Name: suggest
> ### Title: Suggest a package name based on a development package title or
> ###   description
> ### Aliases: suggest
> 
> ### ** Examples
> 
> ## Not run: 
> ##D # Default will use the title from the current path.
> ##D suggest()
> ##D 
> ##D # Can also suggest based on the description
> ##D suggest(field = "Description")
> ## End(Not run)
> 
> # Or by explictly using the text argument
> suggest(text =
+   "A Package for Displaying Visual Scenes as They May Appear to an Animal with Lower Acuity")
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: suggest ... loadNamespace -> namespaceImport -> loadNamespace -> library.dynam
Execution halted
Running 'testthat.R' [4s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(available)
  > 
  > test_check("available")
  -- 1. Error: pick_word_from_title: ignores common words (@test-namr.R#5)  ------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. testthat::expect_equal(...)
    4. available:::pick_word_from_title("wrapper for the intro.js library")
    5. tidytext::stop_words
    6. base::getExportedValue(pkg, name)
    7. base::asNamespace(ns)
    8. base::getNamespace(ns)
    9. base::loadNamespace(name)
   11. base::loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]])
   12. base::library.dynam(lib, package, package.lib)
  
  -- 2. Error: namr: works on real examples (@test-namr.R#33)  -------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. testthat::expect_equal(...)
    4. available:::namr("A Package for Displaying Visual Scenes as They May Appear to an Animal with Lower Acuity")
    5. available:::pick_word_from_title(title, verb = verb, ...)
    6. tidytext::stop_words
    7. base::getExportedValue(pkg, name)
    8. base::asNamespace(ns)
    9. base::getNamespace(ns)
   10. base::loadNamespace(name)
   12. base::loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]])
   13. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 9 | SKIPPED: 8 | WARNINGS: 0 | FAILED: 2 ]
  1. Error: pick_word_from_title: ignores common words (@test-namr.R#5) 
  2. Error: namr: works on real examples (@test-namr.R#33) 
  
  Error: testthat unit tests failed
  Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/avar.Rcheck/00install.out' for details.
Error(s) in re-building vignettes:
--- re-building 'full-example.Rmd' using rmarkdown
Quitting from lines 222-243 (full-example.Rmd) 
Error: processing vignette 'full-example.Rmd' failed with diagnostics:
package or namespace load failed for 'caret' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'full-example.Rmd'

SUMMARY: processing the following file failed:
  'full-example.Rmd'

Error: Vignette re-building failed.
Execution halted
installed size is 56.6Mb
  sub-directories of 1Mb or more:
    libs  55.8Mb
installed size is  7.9Mb
  sub-directories of 1Mb or more:
    java   7.7Mb
Running examples in 'AWR.Kinesis-Ex.R' failed
The error occurred in:


R version 4.0.2 (2020-06-22) -- "Taking Off Again"
Copyright (C) 2020 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64 (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

  Natural language support but running in an English locale

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> pkgname <- "AWR.Kinesis"
> source(file.path(R.home("share"), "R", "examples-header.R"))
> options(warn = 1)
> options(pager = "console")
> library('AWR.Kinesis')
> 
> base::assign(".oldSearch", base::search(), pos = 'CheckExEnv')
> base::assign(".old_wd", base::getwd(), pos = 'CheckExEnv')
> cleanEx()
Error: connections left open:
	stdin (file)
Execution halted
installed size is 67.2Mb
  sub-directories of 1Mb or more:
    java  67.2Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/aws.alexa.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/AzureKusto.Rcheck/00install.out' for details.
CRexp_set: no visible global function definition for 'runif'
b6e6rl: no visible global function definition for 'runif'
derand_RL: no visible global function definition for 'runif'
derandexp_RL: no visible global function definition for 'runif'
nahvyb_expt: no visible global function definition for 'runif'
roulete: no visible global function definition for 'runif'
Undefined global functions or variables:
  runif
Consider adding
  importFrom("stats", "runif")
to your NAMESPACE file.
.generateTransform: no visible global function definition for 'sd'
.generateUnitHyperCube: no visible global function definition for
  'runif'
.makeBoundedSingleStep: no visible global function definition for
  'runif'
.makeBoundedStep: no visible global function definition for 'runif'
.makeStep: no visible global function definition for 'runif'
.staircaseSampling: no visible global function definition for 'runif'
GaussianPrior: no visible global function definition for 'qnorm'
LogNormalPrior: no visible global function definition for 'qnorm'
Undefined global functions or variables:
  qnorm runif sd
Consider adding
  importFrom("stats", "qnorm", "runif", "sd")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/babelwhale.Rcheck/00install.out' for details.
installed size is  9.4Mb
  sub-directories of 1Mb or more:
    data   9.4Mb
installed size is  7.5Mb
  sub-directories of 1Mb or more:
    R      1.2Mb
    data   3.3Mb
    libs   2.3Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/backports.Rcheck/00install.out' for details.
BACprior.CV: no visible global function definition for 'na.fail'
BACprior.CV: no visible global function definition for 'abline'
BACprior.boot: no visible global function definition for 'na.fail'
BACprior.boot: no visible global function definition for 'abline'
BACprior.lm: no visible global function definition for 'na.fail'
BACprior.lm: no visible global function definition for 'coef'
BACprior.lm: no visible global function definition for 'vcov'
Undefined global functions or variables:
  abline coef na.fail vcov
Consider adding
  importFrom("graphics", "abline")
  importFrom("stats", "coef", "na.fail", "vcov")
to your NAMESPACE file.
'library' or 'require' call to 'mvtnorm' which was already attached by Depends.
  Please remove these calls from your code.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/baggr.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/baguette.Rcheck/00install.out' for details.
Unexported objects imported by ':::' calls:
  'erah:::avoid.processing' 'erah:::convertMSPspectra'
  'erah:::convertMSPspectra.dot' 'erah:::getC.rq' 'erah:::getS.OSD'
  'erah:::load.file' 'erah:::pre.process' 'erah:::sparse.to.vector'
  See the note in ?`:::` about the use of this operator.
Error: package 'erah' could not be loaded
Call sequence:
3: stop(gettextf("package %s could not be loaded", sQuote(pkg)), 
       call. = FALSE, domain = NA)
2: .getRequiredPackages2(pkgInfo, quietly = quietly)
1: library(package, lib.loc = lib.loc, character.only = TRUE, verbose = FALSE)
Execution halted
See chapter 'System and foreign language interfaces' in the 'Writing R
Extensions' manual.
Running 'testthat.R' [9s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(balance)
  > 
  > test_check("balance")
  -- 1. Error: (unknown) (@test-compute.R#9)  ------------------------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. robCompositions::balances
    2. base::getExportedValue(pkg, name)
    3. base::asNamespace(ns)
    4. base::getNamespace(ns)
    5. base::loadNamespace(name)
    8. base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
   11. base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
   12. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 15 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: (unknown) (@test-compute.R#9) 
  
  Error: testthat unit tests failed
  Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/BALCONY.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/BALD.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/BaMORC.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/BaM.Rcheck/00install.out' for details.
best_binomial_bandit : f: no visible global function definition for
  'dbeta'
best_binomial_bandit : f: no visible global function definition for
  'pbeta'
best_binomial_bandit: no visible global function definition for
  'integrate'
best_poisson_bandit : f: no visible global function definition for
  'dgamma'
best_poisson_bandit : f: no visible global function definition for
  'pgamma'
best_poisson_bandit: no visible global function definition for
  'integrate'
deseasonalized_trend: no visible global function definition for
  'predict'
distribution_estimate: no visible global function definition for
  'quantile'
distribution_estimate: no visible global function definition for
  'qbeta'
significance_analysis: no visible global function definition for
  'prop.test'
sim_post: no visible global function definition for 'rbeta'
summarize_metrics: no visible global function definition for 'median'
summarize_metrics: no visible global function definition for
  'prop.test'
Undefined global functions or variables:
  dbeta dgamma integrate median pbeta pgamma predict prop.test qbeta
  quantile rbeta
Consider adding
  importFrom("stats", "dbeta", "dgamma", "integrate", "median", "pbeta",
             "pgamma", "predict", "prop.test", "qbeta", "quantile",
             "rbeta")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bang.Rcheck/00install.out' for details.
Running examples in 'banR-Ex.R' failed
The error most likely occurred in:

> ### Name: geocode
> ### Title: Geocode
> ### Aliases: geocode
> 
> ### ** Examples
> 
> geocode(query = "39 quai André Citroën, Paris")
200
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: geocode ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Running 'testthat.R' [2s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library("testthat")
  > library("banR")
  > test_check("banR")
  -- 1. Error: (unknown) (@test_geocode.R#2)  ------------------------------------
  package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::library("dplyr")
   2. base::tryCatch(...)
   3. base:::tryCatchList(expr, classes, parentenv, handlers)
   4. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   5. value[[3L]](cond)
  
  -- 2. Error: (unknown) (@test_geocodetbl.R#2)  ---------------------------------
  package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::library("dplyr")
   2. base::tryCatch(...)
   3. base:::tryCatchList(expr, classes, parentenv, handlers)
   4. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   5. value[[3L]](cond)
  
  == testthat results  ===========================================================
  [ OK: 0 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 2 ]
  1. Error: (unknown) (@test_geocode.R#2) 
  2. Error: (unknown) (@test_geocodetbl.R#2) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'geocode.Rmd' using rmarkdown
Quitting from lines 13-22 (geocode.Rmd) 
Error: processing vignette 'geocode.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'geocode.Rmd'

SUMMARY: processing the following file failed:
  'geocode.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/banter.Rcheck/00install.out' for details.
extractAffybatch: no visible global function definition for 'new'
Undefined global functions or variables:
  new
Consider adding
  importFrom("methods", "new")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
'library' or 'require' calls to packages already attached by Depends:
  'grid' 'lattice'
  Please remove these calls from your code.
Packages in Depends field not imported from:
  'grid' 'lattice'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
barcode: no visible global function definition for 'unit'
barcode: no visible global function definition for 'grid.newpage'
barcode: no visible global function definition for 'grid.text'
barcode: no visible global function definition for 'gpar'
barcode: no visible global function definition for 'pushViewport'
barcode: no visible global function definition for 'viewport'
barcode: no visible global function definition for 'convertHeight'
barcode: no visible global function definition for 'convertWidth'
barcode: no visible global function definition for 'grid.rect'
barcode: no visible global function definition for 'popViewport'
barcode.panel: no visible global function definition for 'unit'
barcode.panel: no visible global function definition for 'hist'
barcode.panel: no visible global function definition for 'pushViewport'
barcode.panel: no visible global function definition for 'viewport'
barcode.panel: no visible global function definition for 'grid.xaxis'
barcode.panel: no visible global function definition for 'gpar'
barcode.panel: no visible global function definition for 'grid.text'
barcode.panel: no visible global function definition for 'popViewport'
barcode.panel: no visible global function definition for
  'grid.segments'
barcode.panel: no visible global function definition for 'grid.points'
Undefined global functions or variables:
  convertHeight convertWidth gpar grid.newpage grid.points grid.rect
  grid.segments grid.text grid.xaxis hist popViewport pushViewport unit
  viewport
Consider adding
  importFrom("graphics", "hist")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/BARIS.Rcheck/00install.out' for details.
installed size is  6.2Mb
  sub-directories of 1Mb or more:
    libs   5.9Mb
Running examples in 'bartBMA-Ex.R' failed
The error most likely occurred in:

> ### Name: ITEs_bartBMA
> ### Title: ITE Predictions (in-sample) using bartBMA and the method
> ###   described by Hill (2011)
> ### Aliases: ITEs_bartBMA
> 
> ### ** Examples
> 
> n <- 250
> x1 <- rnorm(n)
> x2 <- rnorm(n)
> x3 <- rnorm(n) 
> x4 <- rbinom(n,1,0.5)
> x5 <- as.factor(sample( LETTERS[1:3], n, replace=TRUE))
> 
> p= 0
> xnoise = matrix(rnorm(n*p), nrow=n)
> x5A <- ifelse(x5== 'A',1,0)
> x5B <- ifelse(x5== 'B',1,0)
> x5C <- ifelse(x5== 'C',1,0)
> 
> x_covs_train <- cbind(x1,x2,x3,x4,x5A,x5B,x5C,xnoise)
> 
> #Treatment effect
> #tautrain <- 3
> tautrain <- 1+2*x_covs_train[,2]*x_covs_train[,4]
> 
> #Prognostic function
> mutrain <- 1 + 2*x_covs_train[,5] -1*x_covs_train[,6]-4*x_covs_train[,7] +
+ x_covs_train[,1]*x_covs_train[,3]
> sd_mtrain <- sd(mutrain)
> utrain <- runif(n)
> #pitrain <- 0.8*pnorm((3*mutrain/sd_mtrain)-0.5*x_covs_train[,1])+0.05+utrain/10
> pitrain <- 0.5
> ztrain <- rbinom(n,1,pitrain)
> ytrain <- mutrain + tautrain*ztrain
> #pihattrain <- pbart(x_covs_train,ztrain )$prob.train.mean
> 
> #set lower and upper quantiles for intervals
> lbound <- 0.025
> ubound <- 0.975
> 
> example_output <- ITEs_bartBMA(x_covariates = x_covs_train, 
+                                z_train = ztrain,
+                                y_train = ytrain)
> 
> 
> 
> cleanEx()
installed size is  7.9Mb
  sub-directories of 1Mb or more:
    data   3.1Mb
    doc    1.1Mb
    libs   2.5Mb
Unexported objects imported by ':::' calls:
  'warbleR:::img_wrlbr_int' 'warbleR:::spectro_wrblr_int2'
  See the note in ?`:::` about the use of this operator.
installed size is  5.1Mb
  sub-directories of 1Mb or more:
    data   2.8Mb
    libs   2.3Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/baseballDBR.Rcheck/00install.out' for details.
GNU make is a SystemRequirements.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/basictabler.Rcheck/00install.out' for details.
Error(s) in re-building vignettes:
--- re-building 'BASiNET.Rmd' using rmarkdown
Quitting from lines 69-73 (BASiNET.Rmd) 
Error: processing vignette 'BASiNET.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'BASiNET.Rmd'

SUMMARY: processing the following file failed:
  'BASiNET.Rmd'

Error: Vignette re-building failed.
Execution halted
Malformed Title field: should not end in a period.
Package in Depends field not imported from: 'methods'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/BasketballAnalyzeR.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/basket.Rcheck/00install.out' for details.
Error(s) in re-building vignettes:
--- re-building 'BAS-vignette.Rmd' using rmarkdown
Quitting from lines 454-457 (BAS-vignette.Rmd) 
Error: processing vignette 'BAS-vignette.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'BAS-vignette.Rmd'

SUMMARY: processing the following file failed:
  'BAS-vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
Packages which this enhances but not available for checking:
  'doMC', 'rPython'
'library' or 'require' call to 'hwriter' which was already attached by Depends.
  Please remove these calls from your code.
prepare_Rd: mkhtml.Rd:31-33: Dropping empty section \details
prepare_Rd: mkhtml.Rd:43-45: Dropping empty section \note
prepare_Rd: mkhtml.Rd:40-42: Dropping empty section \author
prepare_Rd: mkhtml.Rd:37-39: Dropping empty section \references
prepare_Rd: mkhtml.Rd:49-51: Dropping empty section \seealso
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/BatchGetSymbols.Rcheck/00install.out' for details.
Package suggested but not available for checking: 'doMC'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/BAwiR.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bayes4psy.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bayesammi.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bayesbr.Rcheck/00install.out' for details.
FECRT: no visible global function definition for 'pdf'
FECRT: no visible global function definition for 'hist'
FECRT: no visible global function definition for 'abline'
FECRT: no visible global function definition for 'dev.off'
FECRT.analysis: no visible global function definition for 'pdf'
FECRT.analysis: no visible global function definition for 'hist'
FECRT.analysis: no visible global function definition for 'abline'
FECRT.analysis: no visible global function definition for 'dev.off'
fecrt: no visible global function definition for 'pdf'
fecrt: no visible global function definition for 'hist'
fecrt: no visible global function definition for 'abline'
fecrt: no visible global function definition for 'dev.off'
fecrt.analysis: no visible global function definition for 'pdf'
fecrt.analysis: no visible global function definition for 'hist'
fecrt.analysis: no visible global function definition for 'abline'
fecrt.analysis: no visible global function definition for 'dev.off'
Undefined global functions or variables:
  abline dev.off hist pdf
Consider adding
  importFrom("grDevices", "dev.off", "pdf")
  importFrom("graphics", "abline", "hist")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bayesCT.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bayesdfa.Rcheck/00install.out' for details.
Package suggested but not available for checking: 'doMC'
installed size is  9.1Mb
  sub-directories of 1Mb or more:
    doc    5.4Mb
    libs   2.7Mb
BMAnimalTrack: no visible global function definition for 'nlm'
BMAnimalTrack: no visible global function definition for 'qnorm'
dataSim: no visible global function definition for 'rnorm'
rBBridge: no visible global function definition for 'rnorm'
rBMotion: no visible global function definition for 'rnorm'
Undefined global functions or variables:
  nlm qnorm rnorm
Consider adding
  importFrom("stats", "nlm", "qnorm", "rnorm")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/BayesianNetwork.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/BayesianReasoning.Rcheck/00install.out' for details.
Found the following sources/headers not terminated with a newline:
  inst/include/bayeslm.h
Some compilers warn on such files.
GNU make is a SystemRequirements.
NeedsCompilation field should likely be 'yes'
installed size is  8.9Mb
  sub-directories of 1Mb or more:
    doc    2.9Mb
    libs   4.5Mb
Package suggested but not available for checking: 'cyjShiny'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/BayesNetBP.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
noninform_prior : a : f1: no visible global function definition for
  'pbeta'
noninform_prior : a : f1: no visible global function definition for
  'dbeta'
noninform_prior : a: no visible global function definition for
  'integrate'
noninform_prior: no visible global function definition for 'rbeta'
noninform_prior: no visible global function definition for 'optim'
postNullFun : b : f1: no visible global function definition for 'pbeta'
postNullFun : b : f1: no visible global function definition for 'dbeta'
postNullFun : b: no visible global function definition for 'integrate'
prior_prob : a : f1: no visible global function definition for 'pbeta'
prior_prob : a : f1: no visible global function definition for 'dbeta'
prior_prob : a: no visible global function definition for 'integrate'
Undefined global functions or variables:
  dbeta integrate optim pbeta rbeta
Consider adding
  importFrom("stats", "dbeta", "integrate", "optim", "pbeta", "rbeta")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bayesplot.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/BayesPostEst.Rcheck/00install.out' for details.
MHratioPopPref: no visible global function definition for 'runif'
MratioPopMult: no visible global function definition for 'dunif'
MratioPopMult: no visible global function definition for 'runif'
bayesPref: no visible global function definition for 'runif'
calcP: no visible global function definition for 'dunif'
calcP: no visible global function definition for 'dmultinom'
calcdic: no visible global function definition for 'median'
calcdic: no visible binding for global variable 'median'
calcdic: no visible global function definition for 'dmultinom'
calcdicExtern: no visible global function definition for 'median'
calcdicExtern: no visible global function definition for 'dmultinom'
calcdicExtern: no visible binding for global variable 'median'
credibleIntervals: no visible global function definition for 'quantile'
prefPlot: no visible global function definition for 'postscript'
prefPlot: no visible global function definition for 'lines'
prefPlot: no visible global function definition for 'density'
prefPlot: no visible global function definition for 'median'
prefPlot: no visible global function definition for 'legend'
prefPlot: no visible global function definition for 'dev.off'
Undefined global functions or variables:
  density dev.off dmultinom dunif legend lines median postscript
  quantile runif
Consider adding
  importFrom("grDevices", "dev.off", "postscript")
  importFrom("graphics", "legend", "lines")
  importFrom("stats", "density", "dmultinom", "dunif", "median",
             "quantile", "runif")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/BayesSenMC.Rcheck/00install.out' for details.
Packages in Depends field not imported from:
  'MASS' 'combinat' 'gplots' 'mnormt'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
installed size is  6.5Mb
  sub-directories of 1Mb or more:
    data   1.5Mb
    libs   4.3Mb
validate: no visible binding for global variable 'qnorm'
validate: no visible global function definition for 'pchisq'
validate: no visible global function definition for 'qnorm'
validate: no visible global function definition for 'axis'
validate: no visible global function definition for 'points'
validate: no visible global function definition for 'abline'
Undefined global functions or variables:
  abline axis pchisq points qnorm
Consider adding
  importFrom("graphics", "abline", "axis", "points")
  importFrom("stats", "pchisq", "qnorm")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bayesvl.Rcheck/00install.out' for details.
installed size is 25.6Mb
  sub-directories of 1Mb or more:
    libs  25.5Mb
GNU make is a SystemRequirements.
'library' or 'require' call to 'coda' in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Packages in Depends field not imported from:
  'fields' 'poibin' 'rjags'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
BMR.plot: no visible global function definition for 'heat.colors'
BMR.plot: no visible global function definition for 'image.plot'
BMR.plot: no visible global function definition for 'title'
BMR.plot: no visible global function definition for 'mtext'
BMR.plot: no visible global function definition for 'par'
baysic.data: no visible global function definition for 'layout'
baysic.data: no visible global function definition for 'barplot'
baysic.data: no visible global function definition for 'rainbow'
baysic.fit: no visible global function definition for 'jags.model'
baysic.fit: no visible global function definition for 'update'
baysic.fit: no visible global function definition for 'coda.samples'
baysic.test: no visible global function definition for 'ppois'
baysic.test : <anonymous>: no visible global function definition for
  'ppoibin'
baysic.test: no visible global function definition for 'pbinom'
fuzzy.FDR.approx: no visible global function definition for 'p.adjust'
fuzzy.FDR.approx: no visible global function definition for 'runif'
Undefined global functions or variables:
  barplot coda.samples heat.colors image.plot jags.model layout mtext
  p.adjust par pbinom ppoibin ppois rainbow runif title update
Consider adding
  importFrom("grDevices", "heat.colors", "rainbow")
  importFrom("graphics", "barplot", "layout", "mtext", "par", "title")
  importFrom("stats", "p.adjust", "pbinom", "ppois", "runif", "update")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/baystability.Rcheck/00install.out' for details.
BAYSTAR: no visible global function definition for 'median'
BAYSTAR: no visible global function definition for 'ar'
BAYSTAR: no visible global function definition for 'quantile'
BAYSTAR: no visible global function definition for 'dev.new'
BAYSTAR: no visible global function definition for 'ts.plot'
BAYSTAR: no visible global function definition for 'title'
BAYSTAR: no visible global function definition for 'par'
BAYSTAR: no visible global function definition for 'plot.ts'
BAYSTAR: no visible global function definition for 'lines'
BAYSTAR: no visible global function definition for 'acf'
TAR.lagd: no visible global function definition for 'runif'
TAR.sigma: no visible global function definition for 'rgamma'
TAR.simu: no visible global function definition for 'rnorm'
TAR.summary: no visible global function definition for 'quantile'
TAR.summary: no visible global function definition for 'sd'
TAR.thres: no visible global function definition for 'rnorm'
TAR.thres: no visible global function definition for 'runif'
Undefined global functions or variables:
  acf ar dev.new lines median par plot.ts quantile rgamma rnorm runif
  sd title ts.plot
Consider adding
  importFrom("grDevices", "dev.new")
  importFrom("graphics", "lines", "par", "title")
  importFrom("stats", "acf", "ar", "median", "plot.ts", "quantile",
             "rgamma", "rnorm", "runif", "sd", "ts.plot")
to your NAMESPACE file.
Package in Depends field not imported from: 'splines'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Malformed Description field: should contain one or more complete sentences.
LaplaceMetropolis_admkr: no visible binding for global variable
  'median'
LaplaceMetropolis_admkr: no visible global function definition for
  'mad'
LaplaceMetropolis_gaussian: no visible binding for global variable
  'median'
LaplaceMetropolis_gaussian: no visible global function definition for
  'mad'
cost_admkr: no visible global function definition for 'sd'
cov_chol: no visible global function definition for 'qchisq'
cov_chol_admkr: no visible global function definition for 'qchisq'
gibbs_admkr_erro: no visible global function definition for 'rnorm'
gibbs_admkr_erro: no visible global function definition for 'runif'
gibbs_admkr_nw: no visible global function definition for 'qnorm'
gibbs_admkr_nw: no visible global function definition for 'rnorm'
gibbs_admkr_nw: no visible global function definition for 'runif'
loglikelihood_admkr: no visible global function definition for 'sd'
margin_like_admkr: no visible global function definition for 'sd'
np_gibbs: no visible global function definition for 'qnorm'
np_gibbs: no visible global function definition for 'rnorm'
np_gibbs: no visible global function definition for 'runif'
np_gibbs: no visible global function definition for 'rgamma'
Undefined global functions or variables:
  mad median qchisq qnorm rgamma rnorm runif sd
Consider adding
  importFrom("stats", "mad", "median", "qchisq", "qnorm", "rgamma",
             "rnorm", "runif", "sd")
to your NAMESPACE file.
installed size is  5.7Mb
  sub-directories of 1Mb or more:
    extdata   2.3Mb
    libs      2.8Mb
bbmm.contour: no visible global function definition for 'na.omit'
bbmm.contour: no visible global function definition for 'optimize'
bbmm.contour: no visible global function definition for 'contour'
bbmm.contour: no visible global function definition for 'points'
bbmm.contour: no visible global function definition for 'lines'
brownian.bridge: no visible global function definition for 'sd'
brownian.motion.variance: no visible global function definition for
  'optimize'
Undefined global functions or variables:
  contour lines na.omit optimize points sd
Consider adding
  importFrom("graphics", "contour", "lines", "points")
  importFrom("stats", "na.omit", "optimize", "sd")
to your NAMESPACE file.
bbo: no visible global function definition for 'runif'
bbo: no visible global function definition for 'tail'
Undefined global functions or variables:
  runif tail
Consider adding
  importFrom("stats", "runif")
  importFrom("utils", "tail")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bbsBayes.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
'library' or 'require' call to 'rgl' in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bcdata.Rcheck/00install.out' for details.
Running examples in 'BcDiag-Ex.R' failed
The error most likely occurred in:

> ### Name: anomedOnlybic
> ### Title: The anomedOnlybic function
> ### Aliases: anomedOnlybic
> ### Keywords: anomedOnlybic
> 
> ### ** Examples
> 
> data(breastc)
> library(biclust)
Loading required package: MASS
Loading required package: grid
Loading required package: colorspace
Loading required package: lattice
Error: package or namespace load failed for 'biclust' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Package vignette with placeholder title 'Vignette Title':
  'vignette.Rmd'
pairs.bce : panel.cor: no visible global function definition for 'text'
pairs.bce : panel.cor: no visible global function definition for 'cor'
pairs.bce : panel.hist: no visible global function definition for 'par'
pairs.bce : panel.hist: no visible global function definition for
  'hist'
pairs.bce : panel.hist: no visible global function definition for
  'rect'
pairs.bce: no visible global function definition for 'pairs'
panel.cor: no visible global function definition for 'par'
panel.cor: no visible global function definition for 'cor'
panel.cor: no visible global function definition for 'strwidth'
panel.cor: no visible global function definition for 'text'
rdirichlet2: no visible global function definition for 'rgamma'
summary.bce: no visible global function definition for 'cov'
summary.bce: no visible binding for global variable 'sd'
summary.bce: no visible binding for global variable 'quantile'
Undefined global functions or variables:
  cor cov hist pairs par quantile rect rgamma sd strwidth text
Consider adding
  importFrom("graphics", "hist", "pairs", "par", "rect", "strwidth",
             "text")
  importFrom("stats", "cor", "cov", "quantile", "rgamma", "sd")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/Bchron.Rcheck/00install.out' for details.
NeedsCompilation field should likely be 'yes'
Package suggested but not available for checking: 'bcmapsdata'
bcpmeta.model: no visible global function definition for 'rbinom'
bcpmeta.model: no visible global function definition for 'runif'
bcpmeta.parameters: no visible global function definition for 'runif'
cp.plot: no visible global function definition for 'postscript'
cp.plot: no visible global function definition for 'lines'
cp.plot: no visible global function definition for 'axis'
cp.plot: no visible global function definition for 'box'
cp.plot: no visible global function definition for 'points'
cp.plot: no visible global function definition for 'dev.off'
lMarLik.EB.normAR: no visible global function definition for 'optimize'
lMarLik.normAR: no visible global function definition for 'integrate'
marginal.plot: no visible global function definition for 'postscript'
marginal.plot: no visible global function definition for 'axis'
marginal.plot: no visible global function definition for 'box'
marginal.plot: no visible global function definition for 'points'
marginal.plot: no visible global function definition for 'dev.off'
simgen: no visible global function definition for 'rnorm'
up.eta.MH.normAR: no visible global function definition for 'runif'
up.eta.RS.normAR: no visible global function definition for 'runif'
up.parameters.EB.normAR: no visible global function definition for
  'rnorm'
up.parameters.normAR: no visible global function definition for 'rnorm'
up.parameters.normAR: no visible global function definition for 'runif'
up.parameters.normAR: no visible global function definition for
  'rgamma'
Undefined global functions or variables:
  axis box dev.off integrate lines optimize points postscript rbinom
  rgamma rnorm runif
Consider adding
  importFrom("grDevices", "dev.off", "postscript")
  importFrom("graphics", "axis", "box", "lines", "points")
  importFrom("stats", "integrate", "optimize", "rbinom", "rgamma",
             "rnorm", "runif")
to your NAMESPACE file.
Packages suggested but not available for checking:
  'kBET', 'lisi', 'harmony', 'dlfUtils'
plot.cvsvd: no visible binding for global variable 'sd'
plot.cvsvd: no visible global function definition for 'lines'
plot.cvsvd: no visible global function definition for 'segments'
plot.cvsvd: no visible global function definition for 'points'
print.cvsvd: no visible binding for global variable 'sd'
summary.cvsvd: no visible binding for global variable 'sd'
Undefined global functions or variables:
  lines points sd segments
Consider adding
  importFrom("graphics", "lines", "points", "segments")
  importFrom("stats", "sd")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bdchecks.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bdclean.Rcheck/00install.out' for details.
mise: no visible global function definition for 'integrate'
density,BrVitale : density.vitale : <anonymous>: no visible global
  function definition for 'dbeta'
density,Chen99Kernel : <anonymous>: no visible global function
  definition for 'dbeta'
density,HirukawaJLNKernel : <anonymous>: no visible global function
  definition for 'dbeta'
density,MicroBetaChen99Kernel : <anonymous>: no visible global function
  definition for 'dbeta'
density,Vitale : <anonymous>: no visible global function definition for
  'dbeta'
distribution,BernsteinPolynomials : <anonymous>: no visible global
  function definition for 'integrate'
distribution,KernelDensity : <anonymous>: no visible global function
  definition for 'integrate'
print,BoundedDensity: no visible global function definition for 'str'
print,KernelDensity: no visible global function definition for 'str'
rsample,BoundedDensity: no visible global function definition for
  'runif'
setNormalizationConst,MacroBetaChen99Kernel: no visible global function
  definition for 'integrate'
setNormalizationConst,MacroBetaHirukawaTSKernel: no visible global
  function definition for 'integrate'
setNormalizationConstant,MacroBetaHirukawaJLNKernel: no visible global
  function definition for 'integrate'
setNormalizationConstants,MicroBetaChen99Kernel :
  density.kernelFunction: no visible global function definition for
  'dbeta'
setNormalizationConstants,MicroBetaChen99Kernel : <anonymous>: no
  visible global function definition for 'integrate'
show,BoundedDensity: no visible global function definition for 'str'
show,KernelDensity: no visible global function definition for 'str'
Undefined global functions or variables:
  dbeta integrate runif str
Consider adding
  importFrom("stats", "dbeta", "integrate", "runif")
  importFrom("utils", "str")
to your NAMESPACE file.
Running 'test_all.R' [13s]
Running the tests in 'tests/test_all.R' failed.
Complete output:
  > library(testthat)
  > test_check("bdpar")
  Loading required package: bdpar
  -- 1. Failure: startConnectionWithTwitter connectionWithTwitter=FALSE (@test_Con
  `connection$startConnectionWithTwitter()` did not throw an error.
  
  == testthat results  ===========================================================
  [ OK: 567 | SKIPPED: 5 | WARNINGS: 0 | FAILED: 1 ]
  1. Failure: startConnectionWithTwitter connectionWithTwitter=FALSE (@test_Connections.R#8) 
  
  Error: testthat unit tests failed
  Execution halted
Packages in Depends field not imported from:
  'RColorBrewer' 'beadarray'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
beadtypeFilter: no visible global function definition for 'na.omit'
beadtypeFilter: no visible global function definition for 'exprs'
beadtypeFilter: no visible global function definition for 'se.exprs'
beadtypeFilter: no visible global function definition for 'beadNum'
beadtypeFilter: no visible global function definition for 'fData'
emCDF: no visible global function definition for 'brewer.pal'
emCDF: no visible global function definition for 'ecdf'
emCDF: no visible global function definition for 'legend'
emCDF: no visible global function definition for 'lines'
emCDF: no visible global function definition for 'text'
emCDF: no visible global function definition for 'reshape'
iccFun : <anonymous>: no visible global function definition for
  'quantile'
varianceplot: no visible global function definition for 'reshape'
varianceplot: no visible global function definition for 'points'
varianceplot: no visible global function definition for 'legend'
Undefined global functions or variables:
  beadNum brewer.pal ecdf exprs fData legend lines na.omit points
  quantile reshape se.exprs text
Consider adding
  importFrom("graphics", "legend", "lines", "points", "text")
  importFrom("stats", "ecdf", "na.omit", "quantile", "reshape")
to your NAMESPACE file.
Running examples in 'beadplexr-Ex.R' failed
The error most likely occurred in:

> ### Name: as_data_frame_analyte
> ### Title: Cast list of analytes to 'data.frame'
> ### Aliases: as_data_frame_analyte
> 
> ### ** Examples
> 
> .analytes <-  list(A = list(
+                 A1 = list(name = "name_a1", concentration = 500),
+                 A2 = list(name = "name_a2", concentration = 50000)))
> 
> as_data_frame_analyte(.analytes)
Error: `map_df()` requires dplyr
Backtrace:
     x
  1. \-beadplexr::as_data_frame_analyte(.analytes)
  2.   \-`%>%`(...)
  3.     +-base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
  4.     \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
  5.       \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
  6.         \-beadplexr:::`_fseq`(`_lhs`)
  7.           \-magrittr::freduce(value, `_function_list`)
  8.             +-base::withVisible(function_list[[k]](value))
  9.             \-function_list[[k]](value)
 10.               \-purrr::map_df(...)
Execution halted
Error(s) in re-building vignettes:
--- re-building 'cba_macsplex_example.Rmd' using rmarkdown
Quitting from lines 20-24 (cba_macsplex_example.Rmd) 
Error: processing vignette 'cba_macsplex_example.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'cba_macsplex_example.Rmd'

--- re-building 'legendplex_analysis.Rmd' using rmarkdown
Quitting from lines 91-96 (legendplex_analysis.Rmd) 
Error: processing vignette 'legendplex_analysis.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'legendplex_analysis.Rmd'

--- re-building 'preparing_flow_data.Rmd' using rmarkdown
--- finished re-building 'preparing_flow_data.Rmd'

SUMMARY: processing the following files failed:
  'cba_macsplex_example.Rmd' 'legendplex_analysis.Rmd'

Error: Vignette re-building failed.
Execution halted
installed size is 12.2Mb
  sub-directories of 1Mb or more:
    libs  10.7Mb
GNU make is a SystemRequirements.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/beats.Rcheck/00install.out' for details.
Running examples in 'beezdemand-Ex.R' failed
The error most likely occurred in:

> ### Name: FitCurves
> ### Title: FitCurves
> ### Aliases: FitCurves
> 
> ### ** Examples
> 
> ## Analyze using Hursh & Silberberg, 2008 equation with a k fixed to 2
> FitCurves(apt[sample(apt$id, 5), ], "hs", k = 2)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: FitCurves ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'beezdemand.Rmd' using rmarkdown
Quitting from lines 76-78 (beezdemand.Rmd) 
Error: processing vignette 'beezdemand.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'beezdemand.Rmd'

SUMMARY: processing the following file failed:
  'beezdemand.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'behaviorchange-Ex.R' failed
The error most likely occurred in:

> ### Name: abcd
> ### Title: Acyclic Behavior Change Diagram
> ### Aliases: abcd print.abcdiagram
> 
> ### ** Examples
> 
> ### Load one of the ABCD matrices supplied
> ### with the behaviorchange package
> data(abcd_specification_example_xtc);
> 
> ### Create ABCD matrix (using 'print' to allow pkgdown() to print properly).
> print(behaviorchange::abcd(abcd_specification_example_xtc));
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: print ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'abcd-laagdrempelige_nederlandse_uitleg.Rmd' using rmarkdown
Quitting from lines 59-94 (abcd-laagdrempelige_nederlandse_uitleg.Rmd) 
Error: processing vignette 'abcd-laagdrempelige_nederlandse_uitleg.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'abcd-laagdrempelige_nederlandse_uitleg.Rmd'

--- re-building 'abcd.Rmd' using rmarkdown
--- finished re-building 'abcd.Rmd'

--- re-building 'complecs.Rmd' using rmarkdown
Quitting from lines 58-59 (complecs.Rmd) 
Error: processing vignette 'complecs.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'complecs.Rmd'

--- re-building 'matrix-van-aspecten-van-de-psychologie.Rmd' using rmarkdown
--- finished re-building 'matrix-van-aspecten-van-de-psychologie.Rmd'

SUMMARY: processing the following files failed:
  'abcd-laagdrempelige_nederlandse_uitleg.Rmd' 'complecs.Rmd'

Error: Vignette re-building failed.
Execution halted
installed size is  5.7Mb
  sub-directories of 1Mb or more:
    libs   5.4Mb
GNU make is a SystemRequirements.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/benchmarkmeData.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/benchmarkme.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/BENMMI.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/benthos.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/Bergm.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bestNormalize.Rcheck/00install.out' for details.
betafam: no visible global function definition for 'pnorm'
betafam: no visible global function definition for 'pchisq'
betafam: no visible global function definition for 'lm'
betafam: no visible global function definition for 'coefficients'
betafam: no visible global function definition for 'glm.fit'
betafam: no visible global function definition for 'gaussian'
betafam: no visible global function definition for 'glmnet'
Undefined global functions or variables:
  coefficients gaussian glm.fit glmnet lm pchisq pnorm
Consider adding
  importFrom("stats", "coefficients", "gaussian", "glm.fit", "lm",
             "pchisq", "pnorm")
to your NAMESPACE file.
Checking should be performed on sources prepared by 'R CMD build'.
Malformed Title field: should not end in a period.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/BETS.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/BFS.Rcheck/00install.out' for details.
installed size is  7.9Mb
  sub-directories of 1Mb or more:
    doc    3.3Mb
    help   1.1Mb
    libs   2.9Mb
Error(s) in re-building vignettes:
--- re-building 'control.Rmd' using rmarkdown
--- finished re-building 'control.Rmd'

--- re-building 'hyp_3_ways.Rmd' using rmarkdown
--- finished re-building 'hyp_3_ways.Rmd'

--- re-building 'in_tandem.Rmd' using rmarkdown
--- finished re-building 'in_tandem.Rmd'

--- re-building 'installation.Rmd' using rmarkdown
--- finished re-building 'installation.Rmd'

--- re-building 'mcmc_diagnostics.Rmd' using rmarkdown
--- finished re-building 'mcmc_diagnostics.Rmd'

--- re-building 'netplot.Rmd' using rmarkdown
--- finished re-building 'netplot.Rmd'

--- re-building 'netstat_custom.Rmd' using rmarkdown
Quitting from lines 46-54 (netstat_custom.Rmd) 
Error: processing vignette 'netstat_custom.Rmd' failed with diagnostics:
package or namespace load failed for 'networktools' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'netstat_custom.Rmd'

--- re-building 'ppc_custom.Rmd' using rmarkdown
Quitting from lines 72-90 (ppc_custom.Rmd) 
Error: processing vignette 'ppc_custom.Rmd' failed with diagnostics:
package or namespace load failed for 'networktools' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'ppc_custom.Rmd'

--- re-building 'predictability.Rmd' using rmarkdown
--- finished re-building 'predictability.Rmd'

--- re-building 'test_sum.Rmd' using rmarkdown
--- finished re-building 'test_sum.Rmd'

--- re-building 'var_model.Rmd' using rmarkdown
--- finished re-building 'var_model.Rmd'

SUMMARY: processing the following files failed:
  'netstat_custom.Rmd' 'ppc_custom.Rmd'

Error: Vignette re-building failed.
Execution halted
Error(s) in re-building vignettes:
--- re-building 'bggum.Rmd' using rmarkdown
Quitting from lines 125-142 (bggum.Rmd) 
Error: processing vignette 'bggum.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'bggum.Rmd'

SUMMARY: processing the following file failed:
  'bggum.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'BGPhazard-Ex.R' failed
The error most likely occurred in:

> ### Name: GaMRes
> ### Title: Markov Gamma Model
> ### Aliases: GaMRes
> 
> ### ** Examples
> 
> 
> 
> ## Simulations may be time intensive. Be patient.
> 
> ## Example 1 
> data(gehan) 
> timesG <- gehan$time[gehan$treat == "6-MP"] 
> deltaG <- gehan$cens[gehan$treat == "6-MP"] 
>  GEX1 <- GaMRes(timesG, deltaG, K = 8, iterations = 3000)
Iterating...
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: GaMRes ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
block.gibbs: no visible global function definition for 'rmultinom'
rdirichlet: no visible global function definition for 'rgamma'
Undefined global functions or variables:
  rgamma rmultinom
Consider adding
  importFrom("stats", "rgamma", "rmultinom")
to your NAMESPACE file.
installed size is  7.2Mb
  sub-directories of 1Mb or more:
    doc    3.3Mb
    libs   2.5Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/BHAI.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
global: no visible global function definition for 'par'
global: no visible global function definition for 'runif'
global: no visible global function definition for 'cov'
mymcmc: no visible global function definition for 'par'
mymcmc: no visible global function definition for 'rnorm'
mymcmc: no visible global function definition for 'runif'
mymcmc: no visible global function definition for 'cov'
mymcmc: no visible global function definition for 'lines'
plkhci: no visible global function definition for 'qchisq'
Undefined global functions or variables:
  cov lines par qchisq rnorm runif
Consider adding
  importFrom("graphics", "lines", "par")
  importFrom("stats", "cov", "qchisq", "rnorm", "runif")
to your NAMESPACE file.
installed size is 132.5Mb
  sub-directories of 1Mb or more:
    include  131.6Mb
Package in Depends field not imported from: 'betareg'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
bias: no visible global function definition for 'predict'
bias: no visible global function definition for 'pnorm'
bias: no visible global function definition for 'model.matrix'
Undefined global functions or variables:
  model.matrix pnorm predict
Consider adding
  importFrom("stats", "model.matrix", "pnorm", "predict")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bib2df.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/BiBitR.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bibliometrix.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/biclustermd.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/biclust.Rcheck/00install.out' for details.
Error(s) in re-building vignettes:
--- re-building 'calibration.Rmd' using rmarkdown
Quitting from lines 25-34 (calibration.Rmd) 
Error: processing vignette 'calibration.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'calibration.Rmd'

SUMMARY: processing the following file failed:
  'calibration.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/BIFIEsurvey.Rcheck/00install.out' for details.
Found the following significant warnings:
  d:/RCompile/CRANpkg/lib/4.0/BH/include/boost/interprocess/detail/win32_api.hpp:151:9: warning: ISO C++ prohibits anonymous structs [-Wpedantic]
  d:/RCompile/CRANpkg/lib/4.0/BH/include/boost/interprocess/detail/win32_api.hpp:159:9: warning: ISO C++ prohibits anonymous structs [-Wpedantic]
  d:/RCompile/CRANpkg/lib/4.0/BH/include/boost/interprocess/detail/win32_api.hpp:184:13: warning: ISO C++ prohibits anonymous structs [-Wpedantic]
  d:/RCompile/CRANpkg/lib/4.0/BH/include/boost/interprocess/detail/win32_api.hpp:186:7: warning: ISO C++ prohibits anonymous structs [-Wpedantic]
See 'd:/Rcompile/CRANpkg/local/4.0/biganalytics.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
Packages in Depends field not imported from:
  'DBI' 'methods'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Call with DUP:
   .Fortran("regcf", as.integer(p), as.integer(p * p/2), bigQR$D, 
       bigQR$rbar, bigQR$thetab, bigQR$tol, beta = numeric(p), nreq = as.integer(nvar), 
       ier = integer(1), DUP = FALSE)
DUP is no longer supported and will be ignored.
bigglm.RODBC: no visible global function definition for 'odbcQuery'
bigglm.RODBC : chunk: no visible global function definition for
  'odbcQuery'
bigglm.RODBC : chunk: no visible global function definition for
  'sqlGetResults'
bigglm,ANY-DBIConnection: no visible global function definition for
  'dbSendQuery'
bigglm,ANY-DBIConnection: no visible global function definition for
  'dbClearResult'
bigglm,ANY-DBIConnection : chunk: no visible global function definition
  for 'dbClearResult'
bigglm,ANY-DBIConnection : chunk: no visible global function definition
  for 'dbSendQuery'
bigglm,ANY-DBIConnection : chunk: no visible global function definition
  for 'fetch'
Undefined global functions or variables:
  dbClearResult dbSendQuery fetch odbcQuery sqlGetResults
installed size is  6.1Mb
  sub-directories of 1Mb or more:
    doc       1.8Mb
    extdata   1.9Mb
    libs      2.2Mb
GNU make is a SystemRequirements.
Found the following significant warnings:
  d:/RCompile/CRANpkg/lib/4.0/BH/include/boost/interprocess/detail/win32_api.hpp:151:9: warning: ISO C++ prohibits anonymous structs [-Wpedantic]
  d:/RCompile/CRANpkg/lib/4.0/BH/include/boost/interprocess/detail/win32_api.hpp:159:9: warning: ISO C++ prohibits anonymous structs [-Wpedantic]
  d:/RCompile/CRANpkg/lib/4.0/BH/include/boost/interprocess/detail/win32_api.hpp:184:13: warning: ISO C++ prohibits anonymous structs [-Wpedantic]
  d:/RCompile/CRANpkg/lib/4.0/BH/include/boost/interprocess/detail/win32_api.hpp:186:7: warning: ISO C++ prohibits anonymous structs [-Wpedantic]
See 'd:/Rcompile/CRANpkg/local/4.0/bigmemory.Rcheck/00install.out' for details.
Checking should be performed on sources prepared by 'R CMD build'.
Running 'testthat.R' [4s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library("testthat")
  > library("bigrquery")
  > 
  > test_check("bigrquery")
  -- 1. Error: historical API continues to work (@test-dplyr.R#4)  ---------------
  dplyr is required to use src_bigquery
  Backtrace:
   1. bigrquery::src_bigquery(bq_test_project(), "basedata")
  
  == testthat results  ===========================================================
  [ OK: 100 | SKIPPED: 59 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: historical API continues to work (@test-dplyr.R#4) 
  
  Error: testthat unit tests failed
  Execution halted
Running examples in 'bigsnpr-Ex.R' failed
The error most likely occurred in:

> ### Name: snp_match
> ### Title: Match alleles
> ### Aliases: snp_match
> 
> ### ** Examples
> 
> sumstats <- data.frame(
+   chr = 1,
+   pos = c(86303, 86331, 162463, 752566, 755890, 758144),
+   a0 = c("T", "G", "C", "A", "T", "G"),
+   a1 = c("G", "A", "T", "G", "A", "A"),
+   beta = c(-1.868, 0.250, -0.671, 2.112, 0.239, 1.272),
+   p = c(0.860, 0.346, 0.900, 0.456, 0.776, 0.383)
+ )
> 
> info_snp <- data.frame(
+   id = c("rs2949417", "rs115209712", "rs143399298", "rs3094315", "rs3115858"),
+   chr = 1,
+   pos = c(86303, 86331, 162463, 752566, 755890),
+   a0 = c("T", "A", "G", "A", "T"),
+   a1 = c("G", "G", "A", "G", "A")
+ )
> 
> snp_match(sumstats, info_snp)
6 variants to be matched.
1 ambiguous SNPs have been removed.
Error: Please install package 'dplyr'.
Execution halted
Running 'spelling.R' [0s]
  Running 'testthat.R' [50s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(bigsnpr)
  Loading required package: bigstatsr
  > 
  > for (k in 1:9)
  +   test_check("bigsnpr", filter = paste0(k, '-'))
  == testthat results  ===========================================================
  [ OK: 146 | SKIPPED: 1 | WARNINGS: 0 | FAILED: 0 ]
  == testthat results  ===========================================================
  [ OK: 32 | SKIPPED: 3 | WARNINGS: 0 | FAILED: 0 ]
  == testthat results  ===========================================================
  [ OK: 25 | SKIPPED: 1 | WARNINGS: 0 | FAILED: 0 ]
  == testthat results  ===========================================================
  [ OK: 28 | SKIPPED: 1 | WARNINGS: 0 | FAILED: 0 ]
  -- 1. Error: (unknown) (@test-5-match.R#26)  -----------------------------------
  Please install package 'dplyr'.
  Backtrace:
   1. testthat::expect_message(...)
   6. bigsnpr::snp_match(sumstats, info_snp)
   7. bigsnpr:::flip_strand(sumstats2$a0)
   8. bigassertr::assert_package("dplyr")
   9. bigassertr::stop2("Please install package '%s'.", pkg)
  
  == testthat results  ===========================================================
  [ OK: 85 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: (unknown) (@test-5-match.R#26) 
  
  Error: testthat unit tests failed
  Execution halted
installed size is  6.4Mb
  sub-directories of 1Mb or more:
    extdata   2.3Mb
    libs      3.5Mb
Found the following significant warnings:
  d:/RCompile/CRANpkg/lib/4.0/BH/include/boost/interprocess/detail/win32_api.hpp:151:9: warning: ISO C++ prohibits anonymous structs [-Wpedantic]
  d:/RCompile/CRANpkg/lib/4.0/BH/include/boost/interprocess/detail/win32_api.hpp:159:9: warning: ISO C++ prohibits anonymous structs [-Wpedantic]
  d:/RCompile/CRANpkg/lib/4.0/BH/include/boost/interprocess/detail/win32_api.hpp:184:13: warning: ISO C++ prohibits anonymous structs [-Wpedantic]
  d:/RCompile/CRANpkg/lib/4.0/BH/include/boost/interprocess/detail/win32_api.hpp:186:7: warning: ISO C++ prohibits anonymous structs [-Wpedantic]
See 'd:/Rcompile/CRANpkg/local/4.0/bigtabulate.Rcheck/00install.out' for details.
Packages in Depends field not imported from:
  'gbm' 'glmnet' 'randomForest' 'tree'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
LDCAEst: no visible global function definition for 'glmnet'
cv.LDCA: no visible global function definition for 'cv.glmnet'
predict.LDCA: no visible global function definition for 'predict'
predict.cv.LDCA: no visible global function definition for 'predict'
predict.tsp.gbm: no visible global function definition for 'predict'
predict.tsp.randomForest: no visible global function definition for
  'predict'
predict.tsp.tree: no visible global function definition for 'predict'
tsp.gbm: no visible global function definition for 'gbm.fit'
tsp.randomForest: no visible global function definition for
  'randomForest'
tsp.tree: no visible global function definition for 'tree.control'
tsp.tree: no visible global function definition for 'tree'
Undefined global functions or variables:
  cv.glmnet gbm.fit glmnet predict randomForest tree tree.control
Consider adding
  importFrom("stats", "predict")
to your NAMESPACE file.
installed size is  5.3Mb
  sub-directories of 1Mb or more:
    data   5.2Mb
Malformed Description field: should contain one or more complete sentences.
chisq.sim.factory : chisq.sim.func: no visible global function
  definition for 'chisq.test'
rmultnom: no visible global function definition for 'runif'
Undefined global functions or variables:
  chisq.test runif
Consider adding
  importFrom("stats", "chisq.test", "runif")
to your NAMESPACE file.
commonprob2sigma: no visible global function definition for 'approxfun'
rmvbin: no visible global function definition for 'qnorm'
simul.commonprob: no visible global function definition for 'qnorm'
Undefined global functions or variables:
  approxfun qnorm
Consider adding
  importFrom("stats", "approxfun", "qnorm")
to your NAMESPACE file.
bin_ps: no visible global function definition for 'runif'
bin_ps: no visible global function definition for 'dbinom'
draw_i: no visible global function definition for 'runif'
Undefined global functions or variables:
  dbinom runif
Consider adding
  importFrom("stats", "dbinom", "runif")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/binomialMix.Rcheck/00install.out' for details.
IndivdRUMIndMH: no visible global function definition for
  'flush.console'
dRUMAuxMix: no visible global function definition for 'flush.console'
dRUMHAM: no visible global function definition for 'flush.console'
dRUMIndMH: no visible global function definition for 'flush.console'
print.binomlogit: no visible global function definition for 'is'
summary.binomlogit: no visible global function definition for 'is'
Undefined global functions or variables:
  flush.console is
Consider adding
  importFrom("methods", "is")
  importFrom("utils", "flush.console")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Malformed Description field: should contain one or more complete sentences.
'library' or 'require' calls in package code:
  'ggplot2' 'lattice' 'polynom' 'tcltk'
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: suppressMessages ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for 'BinQuasi' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
** DONE
bins.quantiles: no visible global function definition for 'quantile'
Undefined global functions or variables:
  quantile
Consider adding
  importFrom("stats", "quantile")
to your NAMESPACE file.
installed size is  6.0Mb
  sub-directories of 1Mb or more:
    libs   2.4Mb
installed size is  7.6Mb
  sub-directories of 1Mb or more:
    libs   6.1Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bioassays.Rcheck/00install.out' for details.
BugReports field is not a suitable URL but appears to contain an email address
  not specified by mailto: nor contained in < >
   use the Contact field instead
Found the following significant warnings:
  Warning: namespace 'Rcpp' is not available and has been replaced
See 'd:/Rcompile/CRANpkg/local/4.0/bioimagetools.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bioinactivation.Rcheck/00install.out' for details.
installed size is 11.0Mb
  sub-directories of 1Mb or more:
    doc       2.5Mb
    extdata   8.0Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/Bioi.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/biomartr.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/biomod2.Rcheck/00install.out' for details.
'library' or 'require' call to 'MGRASTer' in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
.onAttach: no visible global function definition for 'packageVersion'
biom.matrix: no visible global function definition for 'packageVersion'
Undefined global functions or variables:
  packageVersion
Consider adding
  importFrom("utils", "packageVersion")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bioOED.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bioRad.Rcheck/00install.out' for details.
Running 'testthat.R' [4s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(bioseq)
  > 
  > test_check("bioseq")
  -- 1. Error: DNAbin to tibble and reverse (@test-coercion.R#110)  --------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. testthat::expect_equal(...)
    5. bioseq:::as_DNAbin.tbl_df(test_tibble, sequences = sequence)
    7. dplyr::select
    8. base::getExportedValue(pkg, name)
    9. base::asNamespace(ns)
   10. base::getNamespace(ns)
   11. base::loadNamespace(name)
   12. base::library.dynam(lib, package, package.lib)
  
  -- 2. Error: AAbin to tibble and reverse (@test-coercion.R#123)  ---------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. testthat::expect_equal(...)
    5. bioseq:::as_AAbin.tbl_df(test_tibble, sequences = sequence)
    7. dplyr::select
    8. base::getExportedValue(pkg, name)
    9. base::asNamespace(ns)
   10. base::getNamespace(ns)
   11. base::loadNamespace(name)
   12. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 204 | SKIPPED: 0 | WARNINGS: 9 | FAILED: 2 ]
  1. Error: DNAbin to tibble and reverse (@test-coercion.R#110) 
  2. Error: AAbin to tibble and reverse (@test-coercion.R#123) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'intro-bioseq.Rmd' using rmarkdown
--- finished re-building 'intro-bioseq.Rmd'

--- re-building 'ref_database.Rmd' using rmarkdown
Quitting from lines 41-44 (ref_database.Rmd) 
Error: processing vignette 'ref_database.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'ref_database.Rmd'

SUMMARY: processing the following file failed:
  'ref_database.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'bioset-Ex.R' failed
The error most likely occurred in:

> ### Name: calc_factor_conc
> ### Title: Get a factor to convert concentrations.
> ### Aliases: calc_factor_conc
> 
> ### ** Examples
> 
> library("dplyr")
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Error(s) in re-building vignettes:
--- re-building 'introduction.Rmd' using rmarkdown
Quitting from lines 96-101 (introduction.Rmd) 
Error: processing vignette 'introduction.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'introduction.Rmd'

SUMMARY: processing the following file failed:
  'introduction.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/biospear.Rcheck/00install.out' for details.
installed size is  5.6Mb
  sub-directories of 1Mb or more:
    doc   4.7Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/Biotech.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bipartiteD3.Rcheck/00install.out' for details.
installed size is  5.8Mb
  sub-directories of 1Mb or more:
    doc    2.9Mb
    libs   2.0Mb
Depends: includes the non-default packages:
  'colorspace', 'deldir', 'rgl', 'tcltk', 'tcltk2', 'tkrplot'
Adding so many packages to the search path is excessive and importing
selectively is preferable.
Package listed in more than one of Depends, Imports, Suggests, Enhances:
  'colorspace'
A package should be listed in only one of these fields.
Packages in Depends field not imported from:
  'deldir' 'rgl' 'tcltk' 'tcltk2' 'tkrplot'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/BIRDS.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/biscale.Rcheck/00install.out' for details.
Error(s) in re-building vignettes:
--- re-building 'bisect_vignette.Rmd' using rmarkdown
Quitting from lines 69-101 (bisect_vignette.Rmd) 
Error: processing vignette 'bisect_vignette.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'bisect_vignette.Rmd'

SUMMARY: processing the following file failed:
  'bisect_vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'BIS-Ex.R' failed
The error most likely occurred in:

> ### Name: get_bis
> ### Title: Download, parse, and read into memory a BIS data set
> ### Aliases: get_bis
> 
> ### ** Examples
> 
> datasets <- get_datasets()
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: get_datasets ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Package vignette with placeholder title 'Vignette Title':
  'BIS.Rmd'
Error(s) in re-building vignettes:
--- re-building 'BIS.Rmd' using rmarkdown
Quitting from lines 40-44 (BIS.Rmd) 
Error: processing vignette 'BIS.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'BIS.Rmd'

SUMMARY: processing the following file failed:
  'BIS.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bitmexr.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
bivarcalcn: no visible global function definition for 'qnorm'
bivarcalcn: no visible global function definition for 'pnorm'
Undefined global functions or variables:
  pnorm qnorm
Consider adding
  importFrom("stats", "pnorm", "qnorm")
to your NAMESPACE file.
prepare_Rd: bivarcalcn.Rd:49-50: Dropping empty section \details
prepare_Rd: bivarcalcn.Rd:59-61: Dropping empty section \note
prepare_Rd: bivarcalcn.Rd:65-67: Dropping empty section \seealso
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/BivRec.Rcheck/00install.out' for details.
biwt.cor: no visible global function definition for 'covMcd'
biwt.cor: no visible binding for global variable 'mad'
biwt.est: no visible global function definition for 'covMcd'
biwt.est: no visible global function definition for 'mahalanobis'
chi.int: no visible global function definition for 'pchisq'
chi.int.p: no visible global function definition for 'dchisq'
chi.int2: no visible global function definition for 'pchisq'
chi.int2.p: no visible global function definition for 'dchisq'
rejpt.bw: no visible global function definition for 'pchisq'
Undefined global functions or variables:
  covMcd dchisq mad mahalanobis pchisq
Consider adding
  importFrom("stats", "dchisq", "mad", "mahalanobis", "pchisq")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bjscrapeR.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/blaise.Rcheck/00install.out' for details.
Running examples in 'blandr-Ex.R' failed
The error most likely occurred in:

> ### Name: blandr.dataset.fibre
> ### Title: Function to load D'arbela mean velocity of circumferential fibre
> ###   shortening dataset from internet
> ### Aliases: blandr.dataset.fibre
> 
> ### ** Examples
> 
> blandr.dataset.fibre()
Warning in file(con, "r") :
  InternetOpenUrl failed: 'Die Serververbindung konnte nicht hergestellt werden.'
Error in file(con, "r") : cannot open the connection
Calls: blandr.dataset.fibre -> readLines -> file
Execution halted
Running examples in 'blastula-Ex.R' failed
The error most likely occurred in:

> ### Name: block_social_links
> ### Title: A block of social sharing icons with links
> ### Aliases: block_social_links
> 
> ### ** Examples
> 
> # Create an email message with some
> # articles in the `body`; in the footer,
> # add some social sharing icons linking
> # to web content using `block_social_links()`
> email <-
+   compose_email(
+     body =
+       blocks(
+         block_title("Exciting Travel Destinations"),
+         block_articles(
+           article(
+             image = "https://i.imgur.com/dxSXzGb.jpg",
+             title = "Hong Kong",
+             content =
+               "Once home to fishermen and farmers,
+               modern Hong Kong is a teeming,
+               commercially-vibrant metropolis where
+               Chinese and Western influences fuse."
+           ),
+           article(
+             image = "https://i.imgur.com/bJzVIrG.jpg",
+             title = "Australia",
+             content =
+               "Australia ranks as one of the best
+               places to live in the world by all
+               indices of income, human development,
+               healthcare, and civil rights."
+           )
+         )
+       ),
+     footer =
+       blocks(
+         block_text("Thanks for reading! Find us here:"),
+         block_social_links(
+           social_link(
+             service = "pinterest",
+             link = "https://www.pinterest.ca/TravelLeisure/",
+             variant = "color"
+           ),
+           social_link(
+             service = "tripadvisor",
+             link = "https://www.tripadvisor.ca/TravelersChoice",
+             variant = "color"
+           )
+         )
+       )
+   )
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: compose_email ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
install_blat: no visible global function definition for 'download.file'
install_blat: no visible global function definition for 'unzip'
Undefined global functions or variables:
  download.file unzip
Consider adding
  importFrom("utils", "download.file", "unzip")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/blavaan.Rcheck/00install.out' for details.
installed size is  6.7Mb
  sub-directories of 1Mb or more:
    data   3.5Mb
    libs   2.4Mb
bglmer: no visible global function definition for 'packageVersion'
getBglmerDevianceFunctionBody: no visible global function definition
  for 'packageVersion'
getParInfo : <anonymous>: no visible global function definition for
  'sd'
makeRefitDevFun: no visible global function definition for
  'packageVersion'
mkBglmerDevfun: no visible global function definition for
  'packageVersion'
namedList: no visible global function definition for 'setNames'
refit.bmerMod: no visible global function definition for
  'packageVersion'
refit.bmerMod: no visible global function definition for 'model.frame'
refit.bmerMod: no visible global function definition for 'family'
refit.bmerMod: no visible global function definition for 'getCall'
Undefined global functions or variables:
  family getCall model.frame packageVersion sd setNames
Consider adding
  importFrom("stats", "family", "getCall", "model.frame", "sd",
             "setNames")
  importFrom("utils", "packageVersion")
to your NAMESPACE file.
installed size is  6.3Mb
  sub-directories of 1Mb or more:
    libs   5.0Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/BlockCov.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
blockMessage : <anonymous>: no visible global function definition for
  'head'
blockMessage: no visible global function definition for 'head'
blockMessage: no visible global function definition for 'tail'
Undefined global functions or variables:
  head tail
Consider adding
  importFrom("utils", "head", "tail")
to your NAMESPACE file.
installed size is  7.5Mb
  sub-directories of 1Mb or more:
    libs   7.1Mb
blockmodelskmeans: no visible global function definition for 'dist'
matrixplot: no visible global function definition for 'image'
matrixplot: no visible global function definition for 'hsv'
matrixplot: no visible global function definition for 'axis'
Undefined global functions or variables:
  axis dist hsv image
Consider adding
  importFrom("grDevices", "hsv")
  importFrom("graphics", "axis", "image")
  importFrom("stats", "dist")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/blockRAR.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/blscrapeR.Rcheck/00install.out' for details.
File
  inst/LICENCE
will install at top-level and is not mentioned in the DESCRIPTION file.
Package in Depends field not imported from: 'drc'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
bmd: no visible global function definition for 'qnorm'
bmd: no visible global function definition for 'predict'
bmd: no visible global function definition for 'LL.2'
bmd: no visible global function definition for 'LN.2'
bmd: no visible global function definition for 'W1.2'
bmd: no visible global function definition for 'W2.2'
bmd: no visible global function definition for 'LL.5'
bmd: no visible global function definition for 'LN.4'
bmd: no visible global function definition for 'W1.4'
bmd: no visible global function definition for 'W2.4'
bmd: no visible global function definition for 'FPL.4'
bmd: no visible global function definition for 'maED'
bmd: no visible global function definition for 'ED'
Undefined global functions or variables:
  ED FPL.4 LL.2 LL.5 LN.2 LN.4 W1.2 W1.4 W2.2 W2.4 maED predict qnorm
Consider adding
  importFrom("stats", "predict", "qnorm")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
'library' or 'require' calls to packages already attached by Depends:
  'coda' 'functional' 'plyr'
  Please remove these calls from your code.
Packages in Depends field not imported from:
  'coda' 'functional' 'plyr'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
HDistNoSize: no visible global function definition for 'density'
HDistSize: no visible global function definition for 'density'
bmkconverge: no visible global function definition for 'Compose'
bmksensitive: no visible global function definition for 'Compose'
bmksummary: no visible global function definition for 'Compose'
bmksummary: no visible global function definition for 'Curry'
bmksummary: no visible binding for global variable 'quantile'
bmksummary : std.error: no visible global function definition for 'var'
bmksummary: no visible global function definition for 'mcmc'
bmksummary: no visible global function definition for 'mcmc.list'
bmksummary: no visible global function definition for 'median'
bmksummary: no visible global function definition for 'effectiveSize'
bmksummary: no visible global function definition for 'gelman.diag'
Undefined global functions or variables:
  Compose Curry density effectiveSize gelman.diag mcmc mcmc.list median
  quantile var
Consider adding
  importFrom("stats", "density", "median", "quantile", "var")
to your NAMESPACE file.
installed size is  5.5Mb
  sub-directories of 1Mb or more:
    libs   5.1Mb
GNU make is a SystemRequirements.
Malformed Description field: should contain one or more complete sentences.
bmmix : LL.y: no visible global function definition for 'dmultinom'
bmmix : LL.x : <anonymous>: no visible global function definition for
  'dmultinom'
bmmix : LPrior.alpha: no visible global function definition for 'dexp'
bmmix : alpha.move: no visible global function definition for 'rnorm'
bmmix : alpha.move: no visible global function definition for 'runif'
bmmix : phi.move: no visible global function definition for 'rnorm'
bmmix : phi.move: no visible global function definition for 'runif'
bmmix: no visible global function definition for 'read.table'
Undefined global functions or variables:
  dexp dmultinom read.table rnorm runif
Consider adding
  importFrom("stats", "dexp", "dmultinom", "rnorm", "runif")
  importFrom("utils", "read.table")
to your NAMESPACE file.
Error(s) in re-building vignettes:
--- re-building 'using_BMRSr.Rmd' using rmarkdown
Quitting from lines 230-243 (using_BMRSr.Rmd) 
Error: processing vignette 'using_BMRSr.Rmd' failed with diagnostics:
package or namespace load failed for 'tidyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'using_BMRSr.Rmd'

SUMMARY: processing the following file failed:
  'using_BMRSr.Rmd'

Error: Vignette re-building failed.
Execution halted
Malformed Description field: should contain one or more complete sentences.
make_topology: no visible global function definition for 'runif'
Undefined global functions or variables:
  runif
Consider adding
  importFrom("stats", "runif")
to your NAMESPACE file.
bnlr: no visible global function definition for 'dnorm'
bnlr: no visible global function definition for 'runif'
chainsum : <anonymous>: no visible global function definition for
  'quantile'
infocrit: no visible global function definition for 'dnorm'
Undefined global functions or variables:
  dnorm quantile runif
Consider adding
  importFrom("stats", "dnorm", "quantile", "runif")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/BNPmix.Rcheck/00install.out' for details.
installed size is  8.9Mb
  sub-directories of 1Mb or more:
    data   8.7Mb
Error(s) in re-building vignettes:
--- re-building 'bodenmiller.Rmd' using rmarkdown
Quitting from lines 13-32 (bodenmiller.Rmd) 
Error: processing vignette 'bodenmiller.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'bodenmiller.Rmd'

SUMMARY: processing the following file failed:
  'bodenmiller.Rmd'

Error: Vignette re-building failed.
Execution halted
BOGest: no visible global function definition for 'read.table'
BOGstat: no visible global function definition for 'phyper'
BOGstat: no visible global function definition for 'wilcox.test'
BOGstat: no visible global function definition for 'p.adjust'
gseaplot: no visible global function definition for 'par'
gseaplot: no visible global function definition for 'points'
gseaplot: no visible global function definition for 'axis'
gseaplot: no visible global function definition for 'segments'
hgplot: no visible global function definition for 'par'
hgplot: no visible global function definition for 'barplot'
Undefined global functions or variables:
  axis barplot p.adjust par phyper points read.table segments
  wilcox.test
Consider adding
  importFrom("graphics", "axis", "barplot", "par", "points", "segments")
  importFrom("stats", "p.adjust", "phyper", "wilcox.test")
  importFrom("utils", "read.table")
to your NAMESPACE file.
Running examples in 'BOJ-Ex.R' failed
The error most likely occurred in:

> ### Name: get_boj
> ### Title: Download and import a BOJ data set
> ### Aliases: get_boj
> 
> ### ** Examples
> 
> datasets <- get_boj_datasets()
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: get_boj_datasets ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'BOJ.Rmd' using rmarkdown
Quitting from lines 35-37 (BOJ.Rmd) 
Error: processing vignette 'BOJ.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'BOJ.Rmd'

SUMMARY: processing the following file failed:
  'BOJ.Rmd'

Error: Vignette re-building failed.
Execution halted
Malformed Description field: should contain one or more complete sentences.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bomrang.Rcheck/00install.out' for details.
Running examples in 'bomWater-Ex.R' failed
The error most likely occurred in:

> ### Name: get_as_stored
> ### Title: Get quality-checked timeseries data
> ### Aliases: get_as_stored
> 
> ### ** Examples
> 
> # Groundwater level as stored by the BoM
> # PLUMB RD @ NARRABRI'
> get_as_stored(
+   parameter_type = "Ground Water Level",
+   station_number = "GW971623.3.3",
+   start_date = "2020-03-01",
+   end_date = "2020-03-01"
+ )
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: get_as_stored ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'bomWater.Rmd' using rmarkdown
Quitting from lines 102-107 (bomWater.Rmd) 
Error: processing vignette 'bomWater.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'bomWater.Rmd'

SUMMARY: processing the following file failed:
  'bomWater.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/BonEV.Rcheck/00install.out' for details.
installed size is 62.6Mb
  sub-directories of 1Mb or more:
    include   8.5Mb
    lib      53.7Mb
GNU make is a SystemRequirements.
installed size is  8.6Mb
  sub-directories of 1Mb or more:
    libs   8.1Mb
Malformed Title field: should not end in a period.
boostBackend: no visible global function definition for 'model.frame'
findFormulaIn: no visible global function definition for 'as.formula'
kFoldCV: no visible binding for global variable 'par'
predictResponseFromWeightedAverage: no visible global function
  definition for 'weighted.mean'
print.boostr: no visible global function definition for 'str'
Undefined global functions or variables:
  as.formula model.frame par str weighted.mean
Consider adding
  importFrom("graphics", "par")
  importFrom("stats", "as.formula", "model.frame", "weighted.mean")
  importFrom("utils", "str")
to your NAMESPACE file.
Running examples in 'bootImpute-Ex.R' failed
The error most likely occurred in:

> ### Name: bootImpute
> ### Title: Bootstrap then impute an incomplete dataset
> ### Aliases: bootImpute
> 
> ### ** Examples
> 
> #this example shows how you can use bootImpute to impute using the mice
> #package. If you do want to impute using MICE you can instead use the
> #bootMice function, which essentially contains the code below
> library(mice)
Error: package or namespace load failed for 'mice' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bootnet.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
Malformed Description field: should contain one or more complete sentences.
specdens: no visible global function definition for 'quantile'
Undefined global functions or variables:
  quantile
Consider adding
  importFrom("stats", "quantile")
to your NAMESPACE file.
boot.stepAIC: no visible global function definition for 'update'
boot.stepAIC: no visible binding for global variable 'coef'
boot.stepAIC : <anonymous>: no visible global function definition for
  'anova'
boot.stepAIC: no visible global function definition for 'pnorm'
Undefined global functions or variables:
  anova coef pnorm update
Consider adding
  importFrom("stats", "anova", "coef", "pnorm", "update")
to your NAMESPACE file.
Package suggested but not available for checking: 'doMC'
bootSVD: no visible global function definition for 'object.size'
bootSVD : <anonymous> : <anonymous>: no visible global function
  definition for 'quantile'
bootSVD_LD: no visible global function definition for 'txtProgressBar'
bootSVD_LD: no visible global function definition for
  'setTxtProgressBar'
genQ: no visible global function definition for 'rnorm'
getHDpercentiles : <anonymous>: no visible global function definition
  for 'quantile'
getMomentsAndMomentCI: no visible binding for global variable 'var'
os: no visible global function definition for 'object.size'
simEEG: no visible global function definition for 'rnorm'
Undefined global functions or variables:
  object.size quantile rnorm setTxtProgressBar txtProgressBar var
Consider adding
  importFrom("stats", "quantile", "rnorm", "var")
  importFrom("utils", "object.size", "setTxtProgressBar",
             "txtProgressBar")
to your NAMESPACE file.
boottol: no visible global function definition for 'setNames'
boottol : shift: no visible global function definition for 'tail'
boottol : shift: no visible global function definition for 'head'
boottol: no visible global function definition for 'na.omit'
vastol: no visible global function definition for 'setNames'
vastol: no visible global function definition for 'na.omit'
Undefined global functions or variables:
  head na.omit setNames tail
Consider adding
  importFrom("stats", "na.omit", "setNames")
  importFrom("utils", "head", "tail")
to your NAMESPACE file.
Running 'testthat.R' [2s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(bpbounds)
  > 
  > test_check("bpbounds")
  -- 1. Error: (unknown) (@test-bpbounds.R#18)  ----------------------------------
  could not find function "uncount"
  
  == testthat results  ===========================================================
  [ OK: 0 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: (unknown) (@test-bpbounds.R#18) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'bpbounds.Rmd' using rmarkdown
Quitting from lines 36-39 (bpbounds.Rmd) 
Error: processing vignette 'bpbounds.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'bpbounds.Rmd'

SUMMARY: processing the following file failed:
  'bpbounds.Rmd'

Error: Vignette re-building failed.
Execution halted
bPeaksAnalysis: no visible global function definition for 'write.table'
dataReading: no visible global function definition for 'read.table'
dataSmoothing: no visible global function definition for 'filter'
peakDetection: no visible global function definition for 'quantile'
peakDetection: no visible global function definition for 'pdf'
peakDetection: no visible global function definition for 'par'
peakDetection: no visible global function definition for 'text'
peakDetection: no visible global function definition for 'abline'
peakDetection: no visible global function definition for 'points'
peakDetection: no visible global function definition for 'dev.off'
peakDetection: no visible global function definition for 'write.table'
peakDrawing: no visible global function definition for 'par'
peakDrawing: no visible global function definition for 'abline'
peakLocation: no visible global function definition for 'read.table'
peakLocation: no visible global function definition for 'pdf'
peakLocation: no visible global function definition for 'barplot'
peakLocation: no visible global function definition for 'dev.off'
peakLocation: no visible global function definition for 'write.table'
Undefined global functions or variables:
  abline barplot dev.off filter par pdf points quantile read.table text
  write.table
Consider adding
  importFrom("grDevices", "dev.off", "pdf")
  importFrom("graphics", "abline", "barplot", "par", "points", "text")
  importFrom("stats", "filter", "quantile")
  importFrom("utils", "read.table", "write.table")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/BPEC.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/braQCA.Rcheck/00install.out' for details.
apply.breaks: no visible binding for global variable 'median'
break.clust: no visible global function definition for 'median'
breakage.plot: no visible binding for global variable 'median'
breakage.plot: no visible global function definition for 'abline'
breakage.plot: no visible global function definition for 'lm'
find.bottom: no visible global function definition for 'filter'
fit.breakage: no visible global function definition for 'optim'
fit.breakage: no visible global function definition for 'points'
fit.sensitivity.plot: no visible global function definition for
  'contour'
fit.sensitivity.plot: no visible global function definition for
  'points'
fit.sensitivity.plot: no visible global function definition for 'text'
Undefined global functions or variables:
  abline contour filter lm median optim points text
Consider adding
  importFrom("graphics", "abline", "contour", "points", "text")
  importFrom("stats", "filter", "lm", "median", "optim")
to your NAMESPACE file.
Error(s) in re-building vignettes:
--- re-building 'break_caret.Rmd' using rmarkdown
Loading required package: lattice
Loading required package: ggplot2
Quitting from lines 24-32 (break_caret.Rmd) 
Error: processing vignette 'break_caret.Rmd' failed with diagnostics:
package or namespace load failed for 'caret' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'break_caret.Rmd'

--- re-building 'break_glm.Rmd' using rmarkdown
--- finished re-building 'break_glm.Rmd'

--- re-building 'break_lm.Rmd' using rmarkdown
--- finished re-building 'break_lm.Rmd'

--- re-building 'break_randomForest.Rmd' using rmarkdown
--- finished re-building 'break_randomForest.Rmd'

--- re-building 'break_ranger.Rmd' using rmarkdown
--- finished re-building 'break_ranger.Rmd'

--- re-building 'break_svm.Rmd' using rmarkdown
--- finished re-building 'break_svm.Rmd'

--- re-building 'break_xgboost.Rmd' using rmarkdown
--- finished re-building 'break_xgboost.Rmd'

SUMMARY: processing the following file failed:
  'break_caret.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/breathtestcore.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/breathteststan.Rcheck/00install.out' for details.
Running examples in 'brickr-Ex.R' failed
The error most likely occurred in:

> ### Name: bricks_from_coords
> ### Title: Create a 3D model object from a long coordinate data frame
> ### Aliases: bricks_from_coords
> 
> ### ** Examples
> 
> #This is a 1x4 yellow brick
> brick <- data.frame(
+         x = 1:4,
+         y = 1, z=1,
+         color = "Bright yellow", 
+         stringsAsFactors=FALSE)
> 
> brick %>% 
+   bricks_from_coords() %>% 
+   build_bricks()
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: %>% ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bridger2.Rcheck/00install.out' for details.
Running 'testthat.R' [2s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(briqr)
  > 
  > test_check("briqr")
  -- 1. Error: Tibble is generated (@test-bq_transactions.R#26)  -----------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. briqr::bq_transactions(...)
   2. dplyr::bind_rows
   3. base::getExportedValue(pkg, name)
   4. base::asNamespace(ns)
   5. base::getNamespace(ns)
   6. base::loadNamespace(name)
   7. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 17 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: Tibble is generated (@test-bq_transactions.R#26) 
  
  Error: testthat unit tests failed
  Execution halted
Package suggested but not available for checking: 'cmdstanr'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/brms.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/broomExtra.Rcheck/00install.out' for details.
Package suggested but not available for checking: 'glmmADMB'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/broom.mixed.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/broom.Rcheck/00install.out' for details.
Foreign function calls to a different package:
  .C("CharArray", ..., PACKAGE = "libOpenBUGS")
  .C("CmdInterpreter", ..., PACKAGE = "libOpenBUGS")
  .C("Integer", ..., PACKAGE = "libOpenBUGS")
  .C("RealArray", ..., PACKAGE = "libOpenBUGS")
  .C("SetTempDir", ..., PACKAGE = "libOpenBUGS")
  .C("SetWorkingDir", ..., PACKAGE = "libOpenBUGS")
Undeclared package in foreign function calls:
   'libOpenBUGS'
See chapter 'System and foreign language interfaces' in the 'Writing R
Extensions' manual.
Found the following Makefile(s) with an include directive with a pathname using R_HOME:
  src/Makefile.win
Even though not recommended, variable R_HOME may contain spaces.
Makefile directives use space as a separator and there is no portable
way to quote/escape the space in Make rules and directives.  However,
one can and should quote pathnames when passed from Makefile to the
shell, and this can be done specifically when invoking Make recursively.
It is therefore recommended to use the Make '-f' option to include files
in directories specified using R_HOME.  This option can be specified
multiple times to include multiple Makefiles.  Note that 'Makeconf' is
included automatically into top-level makefile of a package.
More information can be found in 'Writing R Extensions'.
Error(s) in re-building vignettes:
--- re-building 'usage.Rmd' using rmarkdown
Quitting from lines 59-63 (usage.Rmd) 
Error: processing vignette 'usage.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'usage.Rmd'

SUMMARY: processing the following file failed:
  'usage.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bsam.Rcheck/00install.out' for details.
installed size is 21.4Mb
  sub-directories of 1Mb or more:
    doc    7.7Mb
    libs  12.9Mb
GNU make is a SystemRequirements.
BSGS.Sample: no visible global function definition for 'rgamma'
BSGS.Simple: no visible global function definition for 'rgamma'
CompWiseGibbs: no visible global function definition for 'runif'
CompWiseGibbs: no visible global function definition for 'rnorm'
CompWiseGibbsSMP: no visible global function definition for 'rbinom'
CompWiseGibbsSMP: no visible global function definition for 'runif'
CompWiseGibbsSMP: no visible global function definition for 'rnorm'
CompWiseGibbsSimple: no visible global function definition for 'runif'
CompWiseGibbsSimple: no visible global function definition for 'rnorm'
CompWiseGibbsSimple: no visible global function definition for 'rgamma'
GroupMH: no visible global function definition for 'runif'
GroupZ.MH: no visible global function definition for 'runif'
Undefined global functions or variables:
  rbinom rgamma rnorm runif
Consider adding
  importFrom("stats", "rbinom", "rgamma", "rnorm", "runif")
to your NAMESPACE file.
plot.bspec: no visible global function definition for 'par'
plot.bspec: no visible global function definition for 'matlines'
plot.bspec: no visible global function definition for 'points'
plot.bspec: no visible global function definition for 'axis'
plot.bspec: no visible global function definition for 'mtext'
plot.bspec: no visible global function definition for 'axTicks'
plot.bspec: no visible global function definition for 'box'
plot.bspecACF: no visible global function definition for 'abline'
plot.bspecACF: no visible global function definition for 'matlines'
Undefined global functions or variables:
  abline axTicks axis box matlines mtext par points
Consider adding
  importFrom("graphics", "abline", "axTicks", "axis", "box", "matlines",
             "mtext", "par", "points")
to your NAMESPACE file.
installed size is  8.8Mb
  sub-directories of 1Mb or more:
    doc    2.1Mb
    libs   6.3Mb
Running examples in 'bssm-Ex.R' failed
The error most likely occurred in:

> ### Name: predict.mcmc_output
> ### Title: Predictions for State Space Models
> ### Aliases: predict.mcmc_output
> 
> ### ** Examples
> 
> require("graphics")
> y <- log10(JohnsonJohnson)
> prior <- uniform(0.01, 0, 1)
> model <- bsm_lg(window(y, end = c(1974, 4)), sd_y = prior,
+   sd_level = prior, sd_slope = prior, sd_seasonal = prior)
> 
> mcmc_results <- run_mcmc(model, iter = 5000)
> future_model <- model
> future_model$y <- ts(rep(NA, 25), 
+   start = tsp(model$y)[2] + 2 * deltat(model$y), 
+   frequency = frequency(model$y))
> pred <- predict(mcmc_results, future_model, type = "state", 
+   nsim = 1000)
> 
> require("dplyr")
Loading required package: dplyr
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
> sumr_fit <- as.data.frame(mcmc_results, variable = "states") %>%
+   group_by(time, iter) %>% 
+   mutate(signal = 
+       value[variable == "level"] + 
+       value[variable == "seasonal_1"]) %>%
+   group_by(time) %>%
+   summarise(mean = mean(signal), 
+     lwr = quantile(signal, 0.025), 
+     upr = quantile(signal, 0.975))
Error in as.data.frame(mcmc_results, variable = "states") %>% group_by(time,  : 
  could not find function "%>%"
Execution halted
Error(s) in re-building vignettes:
--- re-building 'bssm.Rmd' using rmarkdown
Quitting from lines 236-254 (bssm.Rmd) 
Error: processing vignette 'bssm.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'bssm.Rmd'

--- re-building 'growth_model.Rmd' using rmarkdown
Quitting from lines 150-173 (growth_model.Rmd) 
Error: processing vignette 'growth_model.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'growth_model.Rmd'

--- re-building 'psi_pf.Rmd' using rmarkdown
--- finished re-building 'psi_pf.Rmd'

SUMMARY: processing the following files failed:
  'bssm.Rmd' 'growth_model.Rmd'

Error: Vignette re-building failed.
Execution halted
installed size is 11.7Mb
  sub-directories of 1Mb or more:
    libs  10.9Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/btergm.Rcheck/00install.out' for details.
The following directory looks like a leftover from 'knitr':
  'figure'
Please remove from your package.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bulletcp.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bulletr.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bunching.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/bupaR.Rcheck/00install.out' for details.
alpha.proxy: no visible global function definition for 'filled.contour'
alpha.proxy: no visible global function definition for 'axis'
alpha.proxy: no visible global function definition for 'contour'
factor.model.stat: no visible global function definition for 'quantile'
factor.model.stat: no visible global function definition for 'lsfit'
partial.rainbow: no visible binding for global variable 'rainbow'
var.shrink.eqcor: no visible global function definition for 'var'
var.shrink.eqcor: no visible global function definition for 'quantile'
var.shrink.eqcor: no visible global function definition for 'cov2cor'
Undefined global functions or variables:
  axis contour cov2cor filled.contour lsfit quantile rainbow var
Consider adding
  importFrom("grDevices", "rainbow")
  importFrom("graphics", "axis", "contour", "filled.contour")
  importFrom("stats", "cov2cor", "lsfit", "quantile", "var")
to your NAMESPACE file.
plot.bursts: no visible global function definition for 'axis'
plot.bursts: no visible global function definition for 'arrows'
Undefined global functions or variables:
  arrows axis
Consider adding
  importFrom("graphics", "arrows", "axis")
to your NAMESPACE file.
Running examples in 'butcher-Ex.R' failed
The error most likely occurred in:

> ### Name: axe-C5.0
> ### Title: Axing a C5.0.
> ### Aliases: axe-C5.0 axe_call.C5.0 axe_ctrl.C5.0 axe_fitted.C5.0
> 
> ### ** Examples
> 
> # Load libraries
> suppressWarnings(suppressMessages(library(parsnip)))
Error: package or namespace load failed for 'parsnip' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Error(s) in re-building vignettes:
--- re-building 'adding-models-to-butcher.Rmd' using rmarkdown
--- finished re-building 'adding-models-to-butcher.Rmd'

--- re-building 'available-axe-methods.Rmd' using rmarkdown
Quitting from lines 20-43 (available-axe-methods.Rmd) 
Error: processing vignette 'available-axe-methods.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'available-axe-methods.Rmd'

--- re-building 'butcher.Rmd' using rmarkdown
Quitting from lines 18-20 (butcher.Rmd) 
Error: processing vignette 'butcher.Rmd' failed with diagnostics:
package or namespace load failed for 'parsnip' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'butcher.Rmd'

SUMMARY: processing the following files failed:
  'available-axe-methods.Rmd' 'butcher.Rmd'

Error: Vignette re-building failed.
Execution halted
Malformed Description field: should contain one or more complete sentences.
makemim: no visible global function definition for 'cor'
sigtestMTC: no visible global function definition for 'p.adjust'
Undefined global functions or variables:
  cor p.adjust
Consider adding
  importFrom("stats", "cor", "p.adjust")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/c3.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/CA3variants.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/caffsim.Rcheck/00install.out' for details.
File 'cairoDevice/R/zzz.R':
  .onLoad calls:
    message("R session is headless; GTK+ not initialized.")

Package startup functions should use 'packageStartupMessage' to
  generate messages.
See section 'Good practice' in '?.onAttach'.
Found the following significant warnings:
  w32-backend.c:24:5: warning: initialization of 'char **' from incompatible pointer type 'const char **' [-Wincompatible-pointer-types]
See 'd:/Rcompile/CRANpkg/local/4.0/Cairo.Rcheck/00install.out' for details.
Error(s) in re-building vignettes:
--- re-building 'Adapting_Algorithm_for_CAISEr.Rmd' using rmarkdown
Quitting from lines 51-73 (Adapting_Algorithm_for_CAISEr.Rmd) 
Error: processing vignette 'Adapting_Algorithm_for_CAISEr.Rmd' failed with diagnostics:
package or namespace load failed for 'smoof' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'Adapting_Algorithm_for_CAISEr.Rmd'

SUMMARY: processing the following file failed:
  'Adapting_Algorithm_for_CAISEr.Rmd'

Error: Vignette re-building failed.
Execution halted
Package suggested but not available for checking: 'ReGenesees'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/calpassapi.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/CamelUp.Rcheck/00install.out' for details.
installed size is  8.5Mb
  sub-directories of 1Mb or more:
    doc        4.0Mb
    pictures   3.9Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/cancensus.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/cansim.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/capm.Rcheck/00install.out' for details.
bootstrapCapwire: no visible global function definition for 'quantile'
drawCapRatesBeta : <anonymous>: no visible global function definition
  for 'rbeta'
drawCapRatesExp : <anonymous>: no visible global function definition
  for 'rexp'
drawCapRatesGamma : <anonymous>: no visible global function definition
  for 'rgamma'
drawCapRatesGeom : <anonymous>: no visible global function definition
  for 'rgeom'
drawCapRatesUnif : <anonymous>: no visible global function definition
  for 'runif'
partitionCountData : find.3.way.partitions: no visible global function
  definition for 'dmultinom'
Undefined global functions or variables:
  dmultinom quantile rbeta rexp rgamma rgeom runif
Consider adding
  importFrom("stats", "dmultinom", "quantile", "rbeta", "rexp", "rgamma",
             "rgeom", "runif")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/CARBayes.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/CARBayesST.Rcheck/00install.out' for details.
Malformed Title field: should not end in a period.
Sub.pair: no visible global function definition for 'qnorm'
as.record: no visible global function definition for 'capture.output'
estN: no visible global function definition for 'sd'
estN: no visible global function definition for 'qnorm'
estN.bootstrap: no visible global function definition for 'runif'
Undefined global functions or variables:
  capture.output qnorm runif sd
Consider adding
  importFrom("stats", "qnorm", "runif", "sd")
  importFrom("utils", "capture.output")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/caretEnsemble.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/caret.Rcheck/00install.out' for details.
abundance: no visible global function definition for 'D'
Undefined global functions or variables:
  D
Consider adding
  importFrom("stats", "D")
to your NAMESPACE file.
barplotEQR: no visible global function definition for 'barplot'
barplotEQR: no visible global function definition for 'abline'
barplotEQR: no visible global function definition for 'par'
barplotEQR: no visible global function definition for 'text'
Undefined global functions or variables:
  abline barplot par text
Consider adding
  importFrom("graphics", "abline", "barplot", "par", "text")
to your NAMESPACE file.
'library' or 'require' calls in package code:
  'MASS' 'RSQLite' 'grid' 'sm'
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Running examples in 'carpenter-Ex.R' failed
The error most likely occurred in:

> ### Name: carpenter
> ### Title: Build common tables for your research needs!
> ### Aliases: carpenter
> 
> ### ** Examples
> 
> 
> library(magrittr)
> outline_table(iris, 'Species') %>%
+  add_rows(c('Sepal.Length', 'Petal.Length'), stat_meanSD) %>%
+  add_rows('Sepal.Width', stat_medianIQR) %>%
+  renaming('rows', function(x) gsub('Sepal\\.', 'Sepal ', x)) %>%
+  renaming('header', c('Measures', 'Setosa', 'Versicolor', 'Virginica')) %>%
+  build_table(caption = 'A caption for the table')
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: %>% ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'carpenter.Rmd' using rmarkdown
Quitting from lines 76-80 (carpenter.Rmd) 
Error: processing vignette 'carpenter.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'carpenter.Rmd'

SUMMARY: processing the following file failed:
  'carpenter.Rmd'

Error: Vignette re-building failed.
Execution halted
Package vignette with placeholder title 'Vignette Title':
  'Vignette.Rmd'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/cartograflow.Rcheck/00install.out' for details.
installed size is  5.0Mb
  sub-directories of 1Mb or more:
    data   1.2Mb
    libs   2.0Mb
Running examples in 'cartools-Ex.R' failed
The error most likely occurred in:

> ### Name: speedplot
> ### Title: A scatter plot of traffic data.
> ### Aliases: speedplot
> 
> ### ** Examples
> 
> speedplot(QUKtdayX)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: speedplot ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Package vignette with placeholder title 'Vignette Title':
  'cartools.Rmd'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/casen.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/casino.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/cassandRa.Rcheck/00install.out' for details.
installed size is  6.0Mb
  sub-directories of 1Mb or more:
    libs   4.5Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/CAST.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/catcont.Rcheck/00install.out' for details.
Running examples in 'catenary-Ex.R' failed
The error most likely occurred in:

> ### Name: fittedCatenary
> ### Title: Creates a fittedCatenary object
> ### Aliases: fittedCatenary
> 
> ### ** Examples
> 
> x <- runif(100,0,4)
> y <- f(x,c1=1,c2=2,lambda=3) + rnorm(100,sd=0.1)
> tmp <- fittedCatenary(x,y) 
[1] "Fitted catenary"
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: fittedCatenary ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'fit_cat.Rmd' using rmarkdown

Attaching package: 'catenary'

The following object is masked from 'package:methods':

    show

Quitting from lines 20-30 (fit_cat.Rmd) 
Error: processing vignette 'fit_cat.Rmd' failed with diagnostics:
package or namespace load failed for 'tidyverse' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'fit_cat.Rmd'

SUMMARY: processing the following file failed:
  'fit_cat.Rmd'

Error: Vignette re-building failed.
Execution halted
MDR.high.forward1: no visible global function definition for 'combn'
MDR.sing.mod1: no visible global function definition for 'combn'
MDR.sing.mod1: no visible global function definition for
  'complete.cases'
MDR.sing.mod1: no visible global function definition for 'lm'
MDR.sing.mod1: no visible global function definition for 'aov'
MDR.sing.mod1: no visible global function definition for 'anova'
MDR.stage.forward1: no visible global function definition for 'combn'
MDR.stage.forward1: no visible global function definition for
  'complete.cases'
MDR.stage.forward1: no visible global function definition for 'lm'
MDR.stage.forward1: no visible global function definition for 'resid'
MDR.stage.forward1: no visible global function definition for 'pf'
MDR_forward1: no visible global function definition for
  'complete.cases'
MDR_forward1: no visible global function definition for 'lm'
MDR_forward1: no visible global function definition for 'aov'
low.anova: no visible global function definition for 'complete.cases'
low.anova: no visible global function definition for 'lm'
sing.mod1: no visible global function definition for 'combn'
sing.mod1: no visible global function definition for 'complete.cases'
sing.mod1: no visible global function definition for 'lm'
sing.mod1: no visible global function definition for 'pf'
Undefined global functions or variables:
  anova aov combn complete.cases lm pf resid
Consider adding
  importFrom("stats", "anova", "aov", "complete.cases", "lm", "pf",
             "resid")
  importFrom("utils", "combn")
to your NAMESPACE file.
Running 'testthat.R' [4s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(catfun)
  > 
  > test_check("catfun")
  -- 1. Error: (unknown) (@test-riskdiff.R#4)  -----------------------------------
  package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::library(dplyr)
   2. base::tryCatch(...)
   3. base:::tryCatchList(expr, classes, parentenv, handlers)
   4. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   5. value[[3L]](cond)
  
  == testthat results  ===========================================================
  [ OK: 13 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: (unknown) (@test-riskdiff.R#4) 
  
  Error: testthat unit tests failed
  Execution halted
Malformed Description field: should contain one or more complete sentences.
mi.inference: no visible binding for global variable 'var'
mi.inference: no visible global function definition for 'qt'
mi.inference: no visible global function definition for 'pt'
Undefined global functions or variables:
  pt qt var
Consider adding
  importFrom("stats", "pt", "qt", "var")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
ctab: no visible global function definition for 'xtabs'
mob.eqmain: no visible global function definition for 'model.matrix'
mob.qi: no visible global function definition for 'C'
mob.qi: no visible binding for global variable 'contr.treatment'
mob.rc1: no visible global function definition for 'C'
mob.rc1: no visible binding for global variable 'contr.treatment'
mob.rc1: no visible global function definition for 'model.matrix'
mob.symint: no visible global function definition for 'model.matrix'
print.ctab: no visible global function definition for 'ftable'
Undefined global functions or variables:
  C contr.treatment ftable model.matrix xtabs
Consider adding
  importFrom("stats", "C", "contr.treatment", "ftable", "model.matrix",
             "xtabs")
to your NAMESPACE file.
GNU make is a SystemRequirements.
Running examples in 'cattonum-Ex.R' failed
The error most likely occurred in:

> ### Name: catto_dummy
> ### Title: Dummy encoding
> ### Aliases: catto_dummy
> 
> ### ** Examples
> 
> catto_dummy(iris)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: catto_dummy ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'introduction.Rmd' using rmarkdown
Quitting from lines 23-32 (introduction.Rmd) 
Error: processing vignette 'introduction.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'introduction.Rmd'

SUMMARY: processing the following file failed:
  'introduction.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/causact.Rcheck/00install.out' for details.
binParamPosteriorSampling: no visible global function definition for
  'rbeta'
bindagMonteCarloCausalEffect: no visible global function definition for
  'runif'
getBinDAGModelData: no visible global function definition for 'runif'
logitDist: no visible global function definition for 'runif'
logitDist: no visible global function definition for 'rnorm'
simulateWitnessModel: no visible global function definition for 'runif'
summary.covsearch: no visible global function definition for 'quantile'
summary.iv: no visible global function definition for 'quantile'
summary.wpp: no visible global function definition for 'quantile'
Undefined global functions or variables:
  quantile rbeta rnorm runif
Consider adding
  importFrom("stats", "quantile", "rbeta", "rnorm", "runif")
to your NAMESPACE file.
Running examples in 'CausalImpact-Ex.R' failed
The error most likely occurred in:

> ### Name: CausalImpact
> ### Title: Inferring causal impact using structural time-series models
> ### Aliases: CausalImpact
> 
> ### ** Examples
> 
> # Example 1
> #
> # Example analysis on a simple artificial dataset
> # consisting of a response variable y and a
> # single covariate x1.
> set.seed(1)
> x1 <- 100 + arima.sim(model = list(ar = 0.999), n = 52)
> y <- 1.2 * x1 + rnorm(52)
> y[41:52] <- y[41:52] + 10
> data <- cbind(y, x1)
> pre.period <- c(1, 40)
> post.period <- c(41, 52)
> impact <- CausalImpact(data, pre.period, post.period)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: CausalImpact ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'CausalImpact.Rmd' using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Loading required package: bsts
Loading required package: BoomSpikeSlab
Loading required package: Boom
Loading required package: MASS

Attaching package: 'Boom'

The following object is masked from 'package:stats':

    rWishart


Attaching package: 'BoomSpikeSlab'

The following object is masked from 'package:stats':

    knots

Loading required package: zoo

Attaching package: 'zoo'

The following objects are masked from 'package:base':

    as.Date, as.Date.numeric

Loading required package: xts

Attaching package: 'bsts'

The following object is masked from 'package:BoomSpikeSlab':

    SuggestBurn

Quitting from lines 129-130 (CausalImpact.Rmd) 
Error: processing vignette 'CausalImpact.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'CausalImpact.Rmd'

SUMMARY: processing the following file failed:
  'CausalImpact.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/CausalQueries.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/CAvariants.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/CB2.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/cbar.Rcheck/00install.out' for details.
installed size is 21.0Mb
  sub-directories of 1Mb or more:
    libs  20.5Mb
GNU make is a SystemRequirements.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/CCAMLRGIS.Rcheck/00install.out' for details.
estim.regul: warning in matrix(res, nc = length(grid2)): partial
  argument match of 'nc' to 'ncol'
comput: no visible global function definition for 'cor'
img.estim.regul: no visible global function definition for 'par'
img.estim.regul: no visible global function definition for 'image'
img.estim.regul: no visible global function definition for
  'heat.colors'
img.estim.regul: no visible global function definition for 'axis'
img.estim.regul: no visible global function definition for 'box'
img.matcor: no visible global function definition for 'par'
img.matcor: no visible global function definition for 'image'
img.matcor: no visible global function definition for 'box'
img.matcor: no visible global function definition for 'abline'
img.matcor: no visible global function definition for 'layout'
loo: no visible global function definition for 'cor'
matcor: no visible global function definition for 'cor'
plt.cc: no visible global function definition for 'par'
plt.cc: no visible global function definition for 'layout'
plt.indiv: no visible global function definition for 'text'
plt.indiv: no visible global function definition for 'abline'
plt.var: no visible global function definition for 'points'
plt.var: no visible global function definition for 'text'
plt.var: no visible global function definition for 'abline'
plt.var: no visible global function definition for 'lines'
rcc: no visible global function definition for 'var'
rcc: no visible global function definition for 'cov'
Undefined global functions or variables:
  abline axis box cor cov heat.colors image layout lines par points
  text var
Consider adding
  importFrom("grDevices", "heat.colors")
  importFrom("graphics", "abline", "axis", "box", "image", "layout",
             "lines", "par", "points", "text")
  importFrom("stats", "cor", "cov", "var")
to your NAMESPACE file.
prepare_Rd: estim.regul.Rd:24-26: Dropping empty section \details
prepare_Rd: img.estim.regul.Rd:15-17: Dropping empty section \details
prepare_Rd: img.estim.regul.Rd:24-25: Dropping empty section \examples
ccd.sequential: no visible global function definition for 'qchisq'
dominate.random.sample: no visible global function definition for
  'runif'
draw.circle: no visible global function definition for 'polygon'
juggle2: no visible global function definition for 'rbinom'
plot.cccd: no visible global function definition for 'gray'
plot.cccd: no visible global function definition for 'points'
plot.cccdClassifier: no visible global function definition for 'points'
Undefined global functions or variables:
  gray points polygon qchisq rbinom runif
Consider adding
  importFrom("grDevices", "gray")
  importFrom("graphics", "points", "polygon")
  importFrom("stats", "qchisq", "rbinom", "runif")
to your NAMESPACE file.
VD: no visible binding for global variable 'var'
stratcc : <anonymous>: no visible global function definition for
  'hclust'
stratcc : <anonymous>: no visible global function definition for
  'cutree'
Undefined global functions or variables:
  cutree hclust var
Consider adding
  importFrom("stats", "cutree", "hclust", "var")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/cccrm.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/cchsflow.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ccostr.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
p.Roy: no visible global function definition for 'pf'
p.asym: no visible global function definition for 'pf'
p.perm: no visible global function definition for 'cancor'
plt.asym: no visible global function definition for 'qf'
plt.asym: no visible global function definition for 'df'
plt.asym: no visible global function definition for 'abline'
plt.perm: no visible global function definition for 'hist'
plt.perm: no visible global function definition for 'mtext'
plt.perm: no visible global function definition for 'abline'
Undefined global functions or variables:
  abline cancor df hist mtext pf qf
Consider adding
  importFrom("graphics", "abline", "hist", "mtext")
  importFrom("stats", "cancor", "df", "pf", "qf")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ccrs.Rcheck/00install.out' for details.
'library' or 'require' call to 'bitops' which was already attached by Depends.
  Please remove these calls from your code.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/cdcfluview.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/cder.Rcheck/00install.out' for details.
CDFt: no visible global function definition for 'ecdf'
CDFt: no visible global function definition for 'quantile'
CDFt: no visible global function definition for 'approx'
KolmogorovSmirnov: no visible global function definition for 'ecdf'
KolmogorovSmirnov: no visible global function definition for 'approx'
Undefined global functions or variables:
  approx ecdf quantile
Consider adding
  importFrom("stats", "approx", "ecdf", "quantile")
to your NAMESPACE file.
prepare_Rd: CramerVonMisesTwoSamples.Rd:23: Dropping empty section \examples
prepare_Rd: KolmogorovSmirnov.Rd:26: Dropping empty section \examples
Malformed Description field: should contain one or more complete sentences.
installed size is  5.2Mb
  sub-directories of 1Mb or more:
    data   1.3Mb
    libs   2.4Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/cdom.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/cdparcoord.Rcheck/00install.out' for details.
installed size is  9.4Mb
  sub-directories of 1Mb or more:
    extdata   9.2Mb
Packages in Depends field not imported from:
  'gplots' 'minpack.lm'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
erf: no visible global function definition for 'pnorm'
fitVolDist: no visible global function definition for 'nls.lm'
fitVolDist: no visible global function definition for 'nls.lm.control'
fitVolDist: no visible global function definition for 'optim'
fitVolDist: no visible global function definition for 'relist'
print.fitVolDist: no visible global function definition for 'coef'
print.fitVolDist: no visible global function definition for 'deviance'
print.fitVolDist: no visible global function definition for 'pt'
print.fitVolDist: no visible global function definition for
  'printCoefmat'
resFunChiSq: no visible global function definition for 'relist'
volEq7: no visible global function definition for 'integrate'
Undefined global functions or variables:
  coef deviance integrate nls.lm nls.lm.control optim pnorm
  printCoefmat pt relist
Consider adding
  importFrom("stats", "coef", "deviance", "integrate", "optim", "pnorm",
             "printCoefmat", "pt")
  importFrom("utils", "relist")
to your NAMESPACE file.
installed size is  8.0Mb
  sub-directories of 1Mb or more:
    data   3.2Mb
    doc    1.7Mb
    libs   2.9Mb
cenNID: no visible global function definition for 'sd'
Undefined global functions or variables:
  sd
Consider adding
  importFrom("stats", "sd")
to your NAMESPACE file.
Unexported objects imported by ':::' calls:
  'copula:::dCdu' 'copula:::fitCopStart'
  See the note in ?`:::` about the use of this operator.
Malformed Description field: should contain one or more complete sentences.
MomNIT: no visible global function definition for 'dnorm'
MomNIT: no visible global function definition for 'pnorm'
cdfNI: no visible global function definition for 'pnorm'
cdfNI: no visible global function definition for 'pt'
em.cens: no visible global function definition for 'lm'
em.cens: no visible global function definition for 'coefficients'
em.cens : ft: no visible global function definition for 'dt'
em.cens : ft: no visible global function definition for 'pt'
em.cens: no visible global function definition for 'optimize'
em.cens: no visible global function definition for 'dnorm'
em.cens: no visible global function definition for 'pnorm'
em.cens: no visible global function definition for 'sd'
Undefined global functions or variables:
  coefficients dnorm dt lm optimize pnorm pt sd
Consider adding
  importFrom("stats", "coefficients", "dnorm", "dt", "lm", "optimize",
             "pnorm", "pt", "sd")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/censusr.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
CM: no visible global function definition for 'sd'
Erf: no visible global function definition for 'pnorm'
Erfc: no visible global function definition for 'pnorm'
boot.Cenarma: no visible global function definition for 'coef'
boot.Cenarma: no visible global function definition for 'arima.sim'
cenarma: no visible global function definition for 'arima'
cenarma: no visible global function definition for 'coef'
cenarma: no visible global function definition for 'ARMAacf'
cenarma: no visible global function definition for 'var'
plot.cents: no visible global function definition for 'segments'
plot.cents: no visible global function definition for 'rgb'
plot.cents: no visible global function definition for 'points'
rcarma: no visible global function definition for 'arima.sim'
rcarma: no visible global function definition for 'quantile'
scenNID: no visible global function definition for 'sd'
se.Cenarma: no visible global function definition for 'coef'
se.Cenarma: no visible global function definition for 'sd'
Undefined global functions or variables:
  ARMAacf arima arima.sim coef pnorm points quantile rgb sd segments
  var
Consider adding
  importFrom("grDevices", "rgb")
  importFrom("graphics", "points", "segments")
  importFrom("stats", "ARMAacf", "arima", "arima.sim", "coef", "pnorm",
             "quantile", "sd", "var")
to your NAMESPACE file.
Found the following Makefile(s) without a final LF:
  src/Makevars
Some 'make' programs ignore lines not ending in LF.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ceramic.Rcheck/00install.out' for details.
select_lambda: no visible global function definition for 'median'
Undefined global functions or variables:
  median
Consider adding
  importFrom("stats", "median")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ceRtainty.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
cf_estimate_quantiles: no visible global function definition for
  'qnorm'
Undefined global functions or variables:
  qnorm
Consider adding
  importFrom("stats", "qnorm")
to your NAMESPACE file.
installed size is 39.3Mb
  sub-directories of 1Mb or more:
    include  38.9Mb
Malformed Title field: should not end in a period.
Malformed Description field: should contain one or more complete sentences.
sw.plot : <anonymous>: no visible global function definition for
  'median'
sw.plot : <anonymous>: no visible global function definition for 'mad'
sw.plot : my.line: no visible global function definition for 'lines'
sw.plot : island.line: no visible global function definition for
  'lines'
sw.plot: no visible global function definition for 'rug'
sw.plot: no visible global function definition for 'axis'
sw.plot: no visible global function definition for 'mtext'
sw.plot: no visible global function definition for 'abline'
sw.plot: no visible global function definition for 'points'
sw.rob : <anonymous>: no visible global function definition for
  'median'
sw.rob : <anonymous>: no visible global function definition for 'mad'
sw.threshold : <anonymous>: no visible global function definition for
  'median'
sw.threshold : <anonymous>: no visible global function definition for
  'mad'
Undefined global functions or variables:
  abline axis lines mad median mtext points rug
Consider adding
  importFrom("graphics", "abline", "axis", "lines", "mtext", "points",
             "rug")
  importFrom("stats", "mad", "median")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/CGPfunctions.Rcheck/00install.out' for details.
BugReports field is not a suitable URL but contains an email address:
   use the Contact field instead
Running examples in 'ChangePointTaylor-Ex.R' failed
The error most likely occurred in:

> ### Name: change_point_analyzer
> ### Title: change_point_analyzer
> ### Aliases: change_point_analyzer
> 
> ### ** Examples
> 
> x <- US_Trade_Deficit$deficit_billions
> label_vals <- US_Trade_Deficit$date
> 
> change_point_analyzer(x)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: change_point_analyzer ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'ChangePointTaylor-vignette.Rmd' using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Quitting from lines 29-32 (ChangePointTaylor-vignette.Rmd) 
Error: processing vignette 'ChangePointTaylor-vignette.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'ChangePointTaylor-vignette.Rmd'

SUMMARY: processing the following file failed:
  'ChangePointTaylor-vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
Hartree2Joule: no visible binding for global variable
  'universalConstants'
Hertz2Joule: no visible binding for global variable
  'universalConstants'
Joule2Hartree: no visible binding for global variable
  'universalConstants'
Joule2Hertz: no visible binding for global variable
  'universalConstants'
Joule2Kelvin: no visible binding for global variable
  'universalConstants'
Joule2centimeterMinusOne: no visible binding for global variable
  'universalConstants'
Joule2electronVolt: no visible binding for global variable
  'universalConstants'
Joule2kiloCaloriePerMole: no visible binding for global variable
  'universalConstants'
Joule2kiloJoulePerMole: no visible binding for global variable
  'universalConstants'
KMC: no visible global function definition for 'runif'
Kelvin2Joule: no visible binding for global variable
  'universalConstants'
LandauZener: no visible binding for global variable
  'universalConstants'
LandauZenerProbability: no visible binding for global variable
  'universalConstants'
Marcus: no visible binding for global variable 'universalConstants'
MarcusLevichJortner: no visible binding for global variable
  'universalConstants'
centimeterMinusOne2Joule: no visible binding for global variable
  'universalConstants'
electronVolt2Joule: no visible binding for global variable
  'universalConstants'
kiloCaloriePerMole2Joule: no visible binding for global variable
  'universalConstants'
kiloJoulePerMole2Joule: no visible binding for global variable
  'universalConstants'
Undefined global functions or variables:
  runif universalConstants
Consider adding
  importFrom("stats", "runif")
to your NAMESPACE file.
'library' or 'require' call to 'RCurl' which was already attached by Depends.
  Please remove these calls from your code.
Packages in Depends field not imported from:
  'RCurl' 'bitops' 'methods'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
createDataset: no visible global function definition for 'read.csv'
createInventory: no visible global function definition for 'read.csv'
downloadMaster: no visible global function definition for
  'getURLContent'
downloadMaster: no visible global function definition for 'read.csv'
downloadMaster: no visible global function definition for 'write.csv'
getMissingScrape: no visible global function definition for 'read.csv'
readLocalMaster: no visible global function definition for 'read.csv'
readMonthlyCsv: no visible global function definition for 'read.csv'
scrapeToCsv: no visible global function definition for 'download.file'
writeData: no visible global function definition for 'write.csv'
writeGhcn: no visible global function definition for 'write.table'
writeInventory: no visible global function definition for 'write.table'
writeMonthlyStations: no visible global function definition for
  'read.csv'
writeMonthlyStations: no visible global function definition for
  'write.csv'
Undefined global functions or variables:
  download.file getURLContent read.csv write.csv write.table
Consider adding
  importFrom("utils", "download.file", "read.csv", "write.csv",
             "write.table")
to your NAMESPACE file.
Error(s) in re-building vignettes:
--- re-building 'using-cheatR.Rmd' using rmarkdown
Failed with error:  'unable to load shared object 'D:/temp/RtmpSEc2qx/RLIBS_118a8689d40d6/dplyr/libs/x64/dplyr.dll':
  LoadLibrary failure:  Das angegebene Modul wurde nicht gefunden.
'
Quitting from lines 53-54 (using-cheatR.Rmd) 
Error: processing vignette 'using-cheatR.Rmd' failed with diagnostics:
This function requares 'tidygraph' to work. Please install it.
--- failed re-building 'using-cheatR.Rmd'

SUMMARY: processing the following file failed:
  'using-cheatR.Rmd'

Error: Vignette re-building failed.
Execution halted
Malformed Description field: should contain one or more complete sentences.
Malformed Description field: should contain one or more complete sentences.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/checkLuhn.Rcheck/00install.out' for details.
Running examples in 'cheese-Ex.R' failed
The error most likely occurred in:

> ### Name: absorb
> ### Title: Absorb values into a string containing keys
> ### Aliases: absorb
> 
> ### ** Examples
> 
> #Simple example
> absorb(
+     key = c("mean", "sd", "var"),
+     value = c("10", "2", "4"),
+     text = 
+         c("MEAN: mean, SD: sd",
+           "VAR: var = sd^2",
+           MEAN = "mean"
+         )
+ )
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: absorb ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'cheese.Rmd' using rmarkdown
Quitting from lines 34-41 (cheese.Rmd) 
Error: processing vignette 'cheese.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'cheese.Rmd'

--- re-building 'describe.Rmd' using rmarkdown
Quitting from lines 13-18 (describe.Rmd) 
Error: processing vignette 'describe.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'describe.Rmd'

SUMMARY: processing the following files failed:
  'cheese.Rmd' 'describe.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/chest.Rcheck/00install.out' for details.
Package suggested but not available for checking: 'countreg'
Error(s) in re-building vignettes:
--- re-building 'access_childes_db.Rmd' using rmarkdown
Using current database version: '2018.1'.
Using current database version: '2018.1'.
Quitting from lines 47-49 (access_childes_db.Rmd) 
Error: processing vignette 'access_childes_db.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'access_childes_db.Rmd'

SUMMARY: processing the following file failed:
  'access_childes_db.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'childhoodmortality-Ex.R' failed
The error most likely occurred in:

> ### Name: childhoodmortality
> ### Title: Calculates childhood mortality
> ### Aliases: childhoodmortality
> 
> ### ** Examples
> 
> data("model_ipums_dhs_dataset")
> underfive_mortality_rates <- childhoodmortality(
+  model_ipums_dhs_dataset,
+  grouping ="wealthq",
+  rate_type = "underfive"
+ )
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: childhoodmortality ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Package vignette with placeholder title 'Vignette Title':
  'childhoodmortality.Rmd'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/childsds.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/chilemapas.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/chillR.Rcheck/00install.out' for details.
File
  LICENSE
is not mentioned in the DESCRIPTION file.
choicemodelr : drawDelta: no visible global function definition for
  'rnorm'
choicemodelr : mnlRwMetropOnce: no visible global function definition
  for 'rnorm'
choicemodelr : mnlRwMetropOnce: no visible global function definition
  for 'runif'
choicemodelr : rmultireg: no visible global function definition for
  'rnorm'
choicemodelr : rwishart: no visible global function definition for
  'rchisq'
choicemodelr : rwishart: no visible global function definition for
  'rnorm'
choicemodelr : fsh: no visible global function definition for
  'flush.console'
choicemodelr: no visible global function definition for 'matplot'
choicemodelr: no visible global function definition for 'write.table'
Undefined global functions or variables:
  flush.console matplot rchisq rnorm runif write.table
Consider adding
  importFrom("graphics", "matplot")
  importFrom("stats", "rchisq", "rnorm", "runif")
  importFrom("utils", "flush.console", "write.table")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
Qh.times.dhyper: no visible global function definition for 'var'
Qh.times.dhyper: no visible global function definition for 'pnorm'
Qh.times.dhyper: no visible global function definition for 'dhyper'
TDiM: no visible global function definition for 'sd'
choplump.default: no visible global function definition for
  'flush.console'
choplump.formula: no visible global function definition for 'terms'
cm.compact: no visible global function definition for 'dhyper'
Undefined global functions or variables:
  dhyper flush.console pnorm sd terms var
Consider adding
  importFrom("stats", "dhyper", "pnorm", "sd", "terms", "var")
  importFrom("utils", "flush.console")
to your NAMESPACE file.
installed size is 18.0Mb
  sub-directories of 1Mb or more:
    data  17.9Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/choroplethr.Rcheck/00install.out' for details.
Running 'testthat.R' [5s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(chorrrds)
  > 
  > test_check("chorrrds")
  -- 1. Error: (unknown) (@test-chorrrds.R#3)  -----------------------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. chorrrds::get_songs("tim-maia")
    5. dplyr::tibble
    6. base::getExportedValue(pkg, name)
    7. base::asNamespace(ns)
    8. base::getNamespace(ns)
    9. base::loadNamespace(name)
   10. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 0 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: (unknown) (@test-chorrrds.R#3) 
  
  Error: testthat unit tests failed
  Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/chromer.Rcheck/00install.out' for details.
combineToSingleMatrix: no visible global function definition for
  'read.table'
combineToSingleMatrix: no visible global function definition for
  'write.table'
compareCIM: no visible global function definition for 'sd'
correctData: no visible global function definition for 'wd'
correctData: no visible global function definition for 'threshold'
correctData: no visible binding for global variable 'madmad'
correctData: no visible global function definition for 'wr'
Undefined global functions or variables:
  madmad read.table sd threshold wd wr write.table
Consider adding
  importFrom("stats", "sd")
  importFrom("utils", "read.table", "write.table")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/chunked.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/cimir.Rcheck/00install.out' for details.
Running examples in 'CIMTx-Ex.R' failed
The error most likely occurred in:

> ### Name: bart_multiTrt
> ### Title: Bayesian Additive Regression Trees (BART)
> ### Aliases: bart_multiTrt
> 
> ### ** Examples
> 
> library(CIMTx)
> set.seed(3242019)
> idata = data_gen(n = 3, ratio =1,scenario = 1)
> trt_ind <- as.numeric(idata$trtdat$trt_ind)
> all_vars <- idata$trtdat[, -1] #exclude treatment indicator
> y <- idata$Yobs
> reference_trt <- 2
> causal_multi_treat(y = y, x = idata$trtdat,
+ trt = trt_ind, method = "BART", estimand = "ATT", discard = "No", ndpost = 10, reference_trt = 2)
*****Into main of pbart
*****Data:
data:n,p,np: 3, 11, 0
y1,yn: 0, 0
x1,x[n*p]: 3.000000, 1.000000
*****Number of Trees: 100
*****Number of Cut Points: 2 ... 1
*****burn and ndpost: 1000, 10
*****Prior:mybeta,alpha,tau: 2.000000,0.950000,0.150000
*****binaryOffset: -inf
*****Dirichlet:sparse,theta,omega,a,b,rho,augment: 0,0,1,0.5,1,11,0
*****nkeeptrain,nkeeptest,nkeeptreedraws: 10,10,10
*****printevery: 100
*****skiptr,skipte,skiptreedraws: 1,1,1

MCMC
done 0 (out of 1010)
done 100 (out of 1010)
done 200 (out of 1010)
done 300 (out of 1010)
done 400 (out of 1010)
done 500 (out of 1010)
done 600 (out of 1010)
done 700 (out of 1010)
done 800 (out of 1010)
done 900 (out of 1010)
done 1000 (out of 1010)
time: 0s
check counts
trcnt,tecnt: 10,0
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: causal_multi_treat ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'CINNA.Rmd' using rmarkdown

Attaching package: 'igraph'

The following objects are masked from 'package:stats':

    decompose, spectrum

The following object is masked from 'package:base':

    union

Quitting from lines 231-234 (CINNA.Rmd) 
Error: processing vignette 'CINNA.Rmd' failed with diagnostics:
unable to load shared object 'D:/temp/RtmpyWnlYQ/RLIBS_64f41d24842/dplyr/libs/x64/dplyr.dll':
  LoadLibrary failure:  Das angegebene Modul wurde nicht gefunden.

--- failed re-building 'CINNA.Rmd'

SUMMARY: processing the following file failed:
  'CINNA.Rmd'

Error: Vignette re-building failed.
Execution halted
cin: no visible global function definition for 'pnorm'
gammaHRF: no visible global function definition for 'dgamma'
intertest: no visible global function definition for 'pnorm'
truncSum: no visible global function definition for 'spline'
Undefined global functions or variables:
  dgamma pnorm spline
Consider adding
  importFrom("stats", "dgamma", "pnorm", "spline")
to your NAMESPACE file.
installed size is  5.1Mb
  sub-directories of 1Mb or more:
    data   1.8Mb
    libs   2.8Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/circumplex.Rcheck/00install.out' for details.
Package vignette with placeholder title 'Vignette Title':
  'CISE_vignette.Rmd'
cit.assignBcmst: no visible binding for global variable 'citbcmst'
cit.assignBcmst : <anonymous>: no visible global function definition
  for 'median'
cit.assignBcmst: no visible global function definition for 'prcomp'
cit.assignBcmst: no visible global function definition for 'par'
cit.assignBcmst: no visible global function definition for 'lines'
cit.assignBcmst: no visible global function definition for 'legend'
cit.centroids : <anonymous>: no visible global function definition for
  'median'
cit.centroids : <anonymous>: no visible global function definition for
  'var'
cit.dist: no visible global function definition for 'dist'
cit.dist: no visible global function definition for 'as.dist'
cit.dist: no visible global function definition for 'cor'
cit.distToCentroids: no visible global function definition for
  'quantile'
cit.distToCentroids : <anonymous>: no visible global function
  definition for 'median'
cit.distToCentroids : <anonymous>: no visible global function
  definition for 'mad'
Undefined global functions or variables:
  as.dist citbcmst cor dist legend lines mad median par prcomp quantile
  var
Consider adding
  importFrom("graphics", "legend", "lines", "par")
  importFrom("stats", "as.dist", "cor", "dist", "mad", "median",
             "prcomp", "quantile", "var")
to your NAMESPACE file.
cit.assignCcmst: no visible binding for global variable 'citccmst'
cit.assignCcmst : <anonymous>: no visible global function definition
  for 'median'
cit.assignCcmst : median.na: no visible global function definition for
  'median'
cit.assignCcmst: no visible global function definition for 'prcomp'
cit.assignCcmst: no visible global function definition for 'par'
cit.assignCcmst: no visible global function definition for 'lines'
cit.assignCcmst: no visible global function definition for 'legend'
cit.centroids : <anonymous>: no visible global function definition for
  'median'
cit.centroids : <anonymous>: no visible global function definition for
  'var'
cit.dist: no visible global function definition for 'dist'
cit.dist: no visible global function definition for 'as.dist'
cit.dist: no visible global function definition for 'cor'
cit.distToCentroids: no visible global function definition for
  'quantile'
cit.distToCentroids : <anonymous>: no visible global function
  definition for 'median'
cit.distToCentroids : <anonymous>: no visible global function
  definition for 'mad'
Undefined global functions or variables:
  as.dist citccmst cor dist legend lines mad median par prcomp quantile
  var
Consider adding
  importFrom("graphics", "legend", "lines", "par")
  importFrom("stats", "as.dist", "cor", "dist", "mad", "median",
             "prcomp", "quantile", "var")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ciTools.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
CityPlot: no visible global function definition for 'read.table'
CityPlot: no visible global function definition for 'tail'
CityPlot: no visible global function definition for 'pdf'
CityPlot: no visible global function definition for 'split.screen'
CityPlot: no visible global function definition for 'screen'
CityPlot: no visible global function definition for 'par'
CityPlot: no visible global function definition for 'rect'
CityPlot: no visible global function definition for 'text'
CityPlot: no visible global function definition for 'lines'
CityPlot: no visible global function definition for 'dev.off'
Undefined global functions or variables:
  dev.off lines par pdf read.table rect screen split.screen tail text
Consider adding
  importFrom("grDevices", "dev.off", "pdf")
  importFrom("graphics", "lines", "par", "rect", "screen",
             "split.screen", "text")
  importFrom("utils", "read.table", "tail")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/CityWaterBalance.Rcheck/00install.out' for details.
Package vignette with placeholder title 'Vignette Title':
  'desciption-ciuupi.Rmd'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ckanr.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/classifierplots.Rcheck/00install.out' for details.
'library' or 'require' call to 'rggobi' in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
generate_data : <anonymous>: no visible global function definition for
  'runif'
knnf: no visible global function definition for 'terms'
rescaler.default: no visible global function definition for 'sd'
rescaler.default: no visible global function definition for 'median'
rescaler.default: no visible global function definition for 'mad'
simvar.numeric: no visible global function definition for 'runif'
Undefined global functions or variables:
  mad median runif sd terms
Consider adding
  importFrom("stats", "mad", "median", "runif", "sd", "terms")
to your NAMESPACE file.
Running 'testthat.R' [2s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > Sys.setenv("R_TESTS" = "")
  > 
  > library(testthat)
  > library(classyfireR)
  Loading required package: magrittr
  
  Attaching package: 'magrittr'
  
  The following objects are masked from 'package:testthat':
  
      equals, is_less_than, not
  
  > 
  > test_check('classyfireR')
  -- 1. Error: entity-classification (@test-classification.R#4)  -----------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. classyfireR::get_classification("BRMWTNUJHUMWMS-LURJTMIESA-N")
    2. classyfireR:::parse_json_output(json_res)
    3. purrr::map(...)
   10. dplyr::bind_rows(.)
   11. base::getExportedValue(pkg, name)
   12. base::asNamespace(ns)
   13. base::getNamespace(ns)
   14. base::loadNamespace(name)
   15. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 0 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: entity-classification (@test-classification.R#4) 
  
  Error: testthat unit tests failed
  Execution halted
installed size is  5.4Mb
  sub-directories of 1Mb or more:
    libs   5.4Mb
Package vignette with placeholder title 'Vignette Title':
  'my-vignette.Rmd'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/climaemet.Rcheck/00install.out' for details.
clime: no visible global function definition for 'cov'
cv.clime: no visible global function definition for 'cov'
cv.clime: no visible binding for global variable 'sd'
Undefined global functions or variables:
  cov sd
Consider adding
  importFrom("stats", "cov", "sd")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ClinicalUtilityRecal.Rcheck/00install.out' for details.
gxe.cc: no visible global function definition for 'qnorm'
gxe.coh: no visible global function definition for 'qnorm'
utility.cc: no visible global function definition for 'qnorm'
utility.coh: no visible global function definition for 'qnorm'
Undefined global functions or variables:
  qnorm
Consider adding
  importFrom("stats", "qnorm")
to your NAMESPACE file.
installed size is  7.3Mb
  sub-directories of 1Mb or more:
    libs   6.7Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/clr.Rcheck/00install.out' for details.
socp: no visible global function definition for 'as'
Undefined global functions or variables:
  as
Consider adding
  importFrom("methods", "as")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/CluMP.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/clustcurv.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/clustDRM.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/clustEff.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ClusterBootstrap.Rcheck/00install.out' for details.
Error(s) in re-building vignettes:
--- re-building 'Clustering.Rmd' using rmarkdown
Quitting from lines 13-19 (Clustering.Rmd) 
Error: processing vignette 'Clustering.Rmd' failed with diagnostics:
package or namespace load failed for 'tidyverse' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'Clustering.Rmd'

SUMMARY: processing the following file failed:
  'Clustering.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/clustermole.Rcheck/00install.out' for details.
Running 'testthat.R' [5s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > test_check("clustermq")
  Loading required package: clustermq
  * Option 'clustermq.scheduler' not set, defaulting to 'LOCAL'
  --- see: https://mschubert.github.io/clustermq/articles/userguide.html#configuration
  -- 1. Error: (unknown) (@test-2-work_chunk.r#3)  -------------------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::as.data.frame(...)
   2. dplyr::tibble
   3. base::getExportedValue(pkg, name)
   4. base::asNamespace(ns)
   5. base::getNamespace(ns)
   6. base::loadNamespace(name)
   7. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 40 | SKIPPED: 22 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: (unknown) (@test-2-work_chunk.r#3) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'quickstart.Rmd' using rmarkdown
Quitting from lines 144-151 (quickstart.Rmd) 
Error: processing vignette 'quickstart.Rmd' failed with diagnostics:
1/1 jobs failed (0 warnings). Stopping.
(Error #1) DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'quickstart.Rmd'

--- re-building 'technicaldocs.Rmd' using rmarkdown
--- finished re-building 'technicaldocs.Rmd'

--- re-building 'userguide.Rmd' using rmarkdown
Quitting from lines 208-214 (userguide.Rmd) 
Error: processing vignette 'userguide.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'userguide.Rmd'

SUMMARY: processing the following files failed:
  'quickstart.Rmd' 'userguide.Rmd'

Error: Vignette re-building failed.
Execution halted
GNU make is a SystemRequirements.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/clusterSEs.Rcheck/00install.out' for details.
hopkins: no visible global function definition for 'runif'
hopkins: no visible global function definition for 'dist'
Undefined global functions or variables:
  dist runif
Consider adding
  importFrom("stats", "dist", "runif")
to your NAMESPACE file.
clustomit: no visible binding for global variable 'weighted.mean'
sim_unif : multivariate_unif: no visible global function definition for
  'runif'
Undefined global functions or variables:
  runif weighted.mean
Consider adding
  importFrom("stats", "runif", "weighted.mean")
to your NAMESPACE file.
Running examples in 'ClustImpute-Ex.R' failed
The error most likely occurred in:

> ### Name: var_reduction
> ### Title: Reduction of variance
> ### Aliases: var_reduction
> 
> ### ** Examples
> 
> 
> # Random Dataset
> set.seed(739)
> n <- 750 # numer of points
> nr_other_vars <- 2
> mat <- matrix(rnorm(nr_other_vars*n),n,nr_other_vars)
> me<-4 # mean
> x <- c(rnorm(n/3,me/2,1),rnorm(2*n/3,-me/2,1))
> y <- c(rnorm(n/3,0,1),rnorm(n/3,me,1),rnorm(n/3,-me,1))
> dat <- cbind(mat,x,y)
> dat<- as.data.frame(scale(dat)) # scaling
> 
> # Create NAs
> dat_with_miss <- miss_sim(dat,p=.1,seed_nr=120)
> 
> res <- ClustImpute(dat_with_miss,nr_cluster=3)
> var_reduction(res)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: var_reduction ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Running 'spelling.R' [0s]
  Running 'testthat.R' [9s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(ClustImpute)
  > 
  > test_check("ClustImpute")
  -- 1. Error: (unknown) (@test-prediction.R#22)  --------------------------------
  package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::library(dplyr)
   2. base::tryCatch(...)
   3. base:::tryCatchList(expr, classes, parentenv, handlers)
   4. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   5. value[[3L]](cond)
  
  -- 2. Error: No variance reduction for a single cluster (@test-var_reduction.R#1
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. testthat::expect_equal(...)
    4. ClustImpute::var_reduction(res)
    3. clusterObj$complete_data
   11. dplyr::mutate(., pred = clusterObj$clusters)
   14. base::getExportedValue(pkg, name)
   15. base::asNamespace(ns)
   16. base::getNamespace(ns)
   17. base::loadNamespace(name)
   18. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 23 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 2 ]
  1. Error: (unknown) (@test-prediction.R#22) 
  2. Error: No variance reduction for a single cluster (@test-var_reduction.R#13) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'Example_on_simulated_data.Rmd' using rmarkdown
Quitting from lines 224-227 (Example_on_simulated_data.Rmd) 
Error: processing vignette 'Example_on_simulated_data.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'Example_on_simulated_data.Rmd'

SUMMARY: processing the following file failed:
  'Example_on_simulated_data.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/clustrd.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/clustree.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/clustringr.Rcheck/00install.out' for details.
braycurtis: no visible global function definition for 'as.dist'
czekanowski: no visible global function definition for 'as.dist'
findComplementaryIndices: no visible global function definition for
  'na.omit'
genSimilarityProfile: no visible global function definition for 'dist'
simprof: no visible global function definition for 'dist'
simprof: no visible global function definition for 'hclust'
simprof.plot : <local> : colorizer: no visible global function
  definition for 'is.leaf'
simprof.plot: no visible global function definition for 'rainbow'
simprof.plot: no visible global function definition for 'dendrapply'
simprof.plot: no visible global function definition for 'as.dendrogram'
Undefined global functions or variables:
  as.dendrogram as.dist dendrapply dist hclust is.leaf na.omit rainbow
Consider adding
  importFrom("grDevices", "rainbow")
  importFrom("stats", "as.dendrogram", "as.dist", "dendrapply", "dist",
             "hclust", "is.leaf", "na.omit")
to your NAMESPACE file.
cma_es: no visible global function definition for 'rnorm'
f_rand: no visible global function definition for 'runif'
Undefined global functions or variables:
  rnorm runif
Consider adding
  importFrom("stats", "rnorm", "runif")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/cmaesr.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/CMapViz.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
alpha.cronbach: no visible global function definition for 'cov'
alpha.curve: no visible global function definition for 'text'
Undefined global functions or variables:
  cov text
Consider adding
  importFrom("graphics", "text")
  importFrom("stats", "cov")
to your NAMESPACE file.
Running examples in 'cmstatr-Ex.R' failed
The error most likely occurred in:

> ### Name: ad_ksample
> ### Title: Anderson-Darling K-Sample Test
> ### Aliases: ad_ksample
> 
> ### ** Examples
> 
> library(dplyr)
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Error(s) in re-building vignettes:
--- re-building 'adktest.Rmd' using rmarkdown
--- finished re-building 'adktest.Rmd'

--- re-building 'cmstatr_Graphing.Rmd' using rmarkdown
Quitting from lines 29-33 (cmstatr_Graphing.Rmd) 
Error: processing vignette 'cmstatr_Graphing.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'cmstatr_Graphing.Rmd'

--- re-building 'cmstatr_Tutorial.Rmd' using rmarkdown
Quitting from lines 31-36 (cmstatr_Tutorial.Rmd) 
Error: processing vignette 'cmstatr_Tutorial.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'cmstatr_Tutorial.Rmd'

SUMMARY: processing the following files failed:
  'cmstatr_Graphing.Rmd' 'cmstatr_Tutorial.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/cnaOpt.Rcheck/00install.out' for details.
copynumberBootstrap: no visible global function definition for
  'txtProgressBar'
copynumberBootstrap: no visible global function definition for
  'quantile'
copynumberBootstrap: no visible global function definition for
  'setTxtProgressBar'
gethits: no visible global function definition for 'read.table'
normalizeGC: no visible global function definition for 'median'
plotCNOGpro: no visible global function definition for 'par'
plotCNOGpro: no visible global function definition for 'rainbow'
plotCNOGpro: no visible global function definition for 'density'
plotCNOGpro: no visible global function definition for 'polygon'
plotCNOGpro: no visible global function definition for 'lines'
plotCNOGpro: no visible global function definition for 'legend'
plotCNOGpro: no visible global function definition for 'boxplot'
sampleChromosome: no visible global function definition for 'median'
sampleChromosome: no visible binding for global variable 'var'
setupEmissionMatrix: no visible global function definition for 'dgeom'
store: no visible global function definition for 'write.table'
Undefined global functions or variables:
  boxplot density dgeom legend lines median par polygon quantile
  rainbow read.table setTxtProgressBar txtProgressBar var write.table
Consider adding
  importFrom("grDevices", "rainbow")
  importFrom("graphics", "boxplot", "legend", "lines", "par", "polygon")
  importFrom("stats", "density", "dgeom", "median", "quantile", "var")
  importFrom("utils", "read.table", "setTxtProgressBar",
             "txtProgressBar", "write.table")
to your NAMESPACE file.
CNclusterNcenter: no visible global function definition for 'median'
CNclusterNcenter: no visible binding for global variable 'var'
breakIntoGaps: no visible global function definition for 'runif'
centerprob: no visible global function definition for 'pnorm'
getz: no visible global function definition for 'predict'
smad: no visible global function definition for 'mad'
smedian: no visible global function definition for 'median'
smedian.sample: no visible global function definition for 'median'
smedmad: no visible global function definition for 'median'
smedmad: no visible global function definition for 'mad'
Undefined global functions or variables:
  mad median pnorm predict runif var
Consider adding
  importFrom("stats", "mad", "median", "pnorm", "predict", "runif",
             "var")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/CNVScope.Rcheck/00install.out' for details.
coalescentMCMC: no visible global function definition for
  'packageVersion'
coalescentMCMC : getparams: no visible global function definition for
  'nlminb'
sim.coalescent: no visible global function definition for 'segments'
sim.coalescent: no visible global function definition for 'points'
Undefined global functions or variables:
  nlminb packageVersion points segments
Consider adding
  importFrom("graphics", "points", "segments")
  importFrom("stats", "nlminb")
  importFrom("utils", "packageVersion")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/coalitions.Rcheck/00install.out' for details.
Package required and available but unsuitable version: 'backports'

See section 'The DESCRIPTION file' in the 'Writing R Extensions'
manual.
'library' or 'require' calls in package code:
  'lars' 'randomForest' 'ridge' 'snowfall' 'tree'
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
COBRA : COBRA.lars: no visible global function definition for 'lars'
COBRA : COBRA.lars: no visible global function definition for
  'predict.lars'
COBRA : COBRA.tree: no visible global function definition for 'tree'
COBRA : COBRA.tree: no visible global function definition for
  'as.formula'
COBRA : COBRA.tree: no visible global function definition for 'predict'
COBRA : COBRA.ridge: no visible global function definition for
  'linearRidge'
COBRA : COBRA.ridge: no visible global function definition for
  'as.formula'
COBRA : COBRA.ridge: no visible global function definition for
  'predict'
COBRA : COBRA.randomForest: no visible global function definition for
  'randomForest'
COBRA : COBRA.randomForest: no visible global function definition for
  'predict'
COBRA: no visible global function definition for 'sfInit'
COBRA: no visible global function definition for 'sfLibrary'
COBRA: no visible global function definition for 'sfExportAll'
COBRA: no visible global function definition for 'sfSapply'
COBRA: no visible global function definition for 'sfStop'
COBRA: no visible global function definition for 'write.table'
COBRA: no visible global function definition for 'pdf'
COBRA: no visible global function definition for 'points'
COBRA: no visible global function definition for 'legend'
COBRA: no visible global function definition for 'abline'
COBRA: no visible global function definition for 'lines'
COBRA: no visible global function definition for 'dev.off'
COBRA: no visible global function definition for 'dev.new'
Undefined global functions or variables:
  abline as.formula dev.new dev.off lars legend linearRidge lines pdf
  points predict predict.lars randomForest sfExportAll sfInit sfLibrary
  sfSapply sfStop tree write.table
Consider adding
  importFrom("grDevices", "dev.new", "dev.off", "pdf")
  importFrom("graphics", "abline", "legend", "lines", "points")
  importFrom("stats", "as.formula", "predict")
  importFrom("utils", "write.table")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/cocktailApp.Rcheck/00install.out' for details.
Package which this enhances but not available for checking: 'rkward'
Package which this enhances but not available for checking: 'rkward'
Package in Depends field not imported from: 'coda'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/codebook.Rcheck/00install.out' for details.
Running examples in 'codified-Ex.R' failed
The error most likely occurred in:

> ### Name: table_nih_enrollment
> ### Title: Produce an NIH-compliant enrollment table.
> ### Aliases: table_nih_enrollment table_nih_enrollment_pretty
> 
> ### ** Examples
> 
> library(magrittr)
> ds_1 <- tibble::tribble(
+   ~subject_id,   ~gender  , ~race                      ,   ~ethnicity                     ,
+            1L,   "Male"   , "Black or African American",  "Not Hispanic or Latino"        ,
+            2L,   "Male"   , "Black or African American",  "Not Hispanic or Latino"        ,
+            3L,   "Female" , "Black or African American",  "Unknown/Not Reported Ethnicity",
+            4L,   "Male"   , "White"                    ,  "Not Hispanic or Latino"        ,
+            5L,   "Male"   , "White"                    ,  "Not Hispanic or Latino"        ,
+            6L,   "Female" , "White"                    ,  "Not Hispanic or Latino"        ,
+            7L,   "Male"   , "White"                    ,  "Hispanic or Latino"            ,
+            8L,   "Male"   , "White"                    ,  "Hispanic or Latino"
+ )
> 
> table_nih_enrollment(ds_1)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: table_nih_enrollment ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'nih-enrollment-html.Rmd' using rmarkdown
Quitting from lines 46-94 (nih-enrollment-html.Rmd) 
Error: processing vignette 'nih-enrollment-html.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'nih-enrollment-html.Rmd'

SUMMARY: processing the following file failed:
  'nih-enrollment-html.Rmd'

Error: Vignette re-building failed.
Execution halted
Error(s) in re-building vignettes:
--- re-building 'codingMatrices.Rnw' using knitr
Quitting from lines 19-30 (codingMatrices.Rnw) 
Error: processing vignette 'codingMatrices.Rnw' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'codingMatrices.Rnw'

SUMMARY: processing the following file failed:
  'codingMatrices.Rnw'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/coefplot.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
Running 'testthat.R' [2s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(cofeatureR)
  > 
  > test_check("cofeatureR")
  -- 1. Error: (unknown) (@test_plot_cofeature_mat.R#4)  -------------------------
  package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::library("dplyr")
   2. base::tryCatch(...)
   3. base:::tryCatchList(expr, classes, parentenv, handlers)
   4. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   5. value[[3L]](cond)
  
  == testthat results  ===========================================================
  [ OK: 0 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: (unknown) (@test_plot_cofeature_mat.R#4) 
  
  Error: testthat unit tests failed
  Execution halted
Running examples in 'cogmapr-Ex.R' failed
The error most likely occurred in:

> ### Name: ConceptCentrality
> ### Title: Centralities of concepts
> ### Aliases: ConceptCentrality
> 
> ### ** Examples
> 
> project_name <- "a_new_project"
> main_path <- paste0(system.file("testdata", package = "cogmapr"), '/')
> my.project <- ProjectCMap(main_path, project_name)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: ProjectCMap ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Running 'testthat.R' [3s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(cogmapr)
  > 
  > test_check("cogmapr")
  -- 1. Error: (unknown) (@test-cogmapr.R#3)  ------------------------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. cogmapr::ProjectCMap(main_path, project_name)
    2. base::unique(...)
    9. dplyr::mutate(., unit_id = as.numeric(as.character(unit_id)))
   10. base::getExportedValue(pkg, name)
   11. base::asNamespace(ns)
   12. base::getNamespace(ns)
   13. base::loadNamespace(name)
   14. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 0 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: (unknown) (@test-cogmapr.R#3) 
  
  Error: testthat unit tests failed
  Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/cognitoR.Rcheck/00install.out' for details.
Running examples in 'coindeskr-Ex.R' failed
The error most likely occurred in:

> ### Name: get_historic_price
> ### Title: Extract historic Price of Bitcoin for the given time period and
> ###   given currency
> ### Aliases: get_historic_price
> 
> ### ** Examples
> 
> get_historic_price()
Error in do.call(rbind, historic_price$bpi) : 
  second argument must be a list
Calls: get_historic_price -> data.frame -> do.call
Execution halted
BMDE: no visible global function definition for 'quantile'
BMDU: no visible global function definition for 'runif'
BMDU: no visible global function definition for 'quantile'
FS: no visible global function definition for 'qnorm'
GM: no visible global function definition for 'qchisq'
QH: no visible global function definition for 'qchisq'
SG : sgp: no visible global function definition for 'ppois'
SG : sgp: no visible global function definition for 'dpois'
WALD: no visible global function definition for 'qchisq'
WALDCC: no visible global function definition for 'qchisq'
WS: no visible global function definition for 'qchisq'
Undefined global functions or variables:
  dpois ppois qchisq qnorm quantile runif
Consider adding
  importFrom("stats", "dpois", "ppois", "qchisq", "qnorm", "quantile",
             "runif")
to your NAMESPACE file.
Running examples in 'CollapseLevels-Ex.R' failed
The error most likely occurred in:

> ### Name: IVCalc
> ### Title: IVCalc
> ### Aliases: IVCalc
> 
> ### ** Examples
> 
> 
> # Load the German_Credit data set supplied with this package
> 
> data("German_Credit")
> 
> l<-list()
> 
> # Call the function as follows
> 
> l<-IVCalc(German_Credit,resp="Good_Bad",bins=10)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: IVCalc ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'CollapseLevels.Rmd' using rmarkdown
Quitting from lines 54-76 (CollapseLevels.Rmd) 
Error: processing vignette 'CollapseLevels.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'CollapseLevels.Rmd'

SUMMARY: processing the following file failed:
  'CollapseLevels.Rmd'

Error: Vignette re-building failed.
Execution halted
installed size is  8.9Mb
  sub-directories of 1Mb or more:
    doc    1.9Mb
    libs   5.2Mb
Package vignette with placeholder title 'Vignette Title':
  'collectArgs_and_iterateWithArgs.Rmd'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/collector.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/collidr.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/collpcm.Rcheck/00install.out' for details.
installed size is  5.3Mb
  sub-directories of 1Mb or more:
    doc   5.0Mb
Error(s) in re-building vignettes:
--- re-building 'colorDF.Rmd' using rmarkdown
Quitting from lines 41-44 (colorDF.Rmd) 
Error: processing vignette 'colorDF.Rmd' failed with diagnostics:
package or namespace load failed for 'tidyverse' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'colorDF.Rmd'

SUMMARY: processing the following file failed:
  'colorDF.Rmd'

Error: Vignette re-building failed.
Execution halted
cICA: no visible global function definition for 'mvfft'
cICA: no visible global function definition for 'ar.yw'
cICA: no visible global function definition for 'rnorm'
scICA: no visible global function definition for 'rnorm'
Undefined global functions or variables:
  ar.yw mvfft rnorm
Consider adding
  importFrom("stats", "ar.yw", "mvfft", "rnorm")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/colorfindr.Rcheck/00install.out' for details.
Malformed Title field: should not end in a period.
Package in Depends field not imported from: 'grid'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
plotVenn2d : twoWayOverlap: no visible global function definition for
  'grid.polygon'
plotVenn2d : twoWayOverlap: no visible global function definition for
  'gpar'
plotVenn2d: no visible global function definition for 'grid.text'
plotVenn2d: no visible global function definition for 'gpar'
plotVenn2d: no visible global function definition for 'grid.polygon'
plotVenn3d : twoWayOverlap: no visible global function definition for
  'grid.polygon'
plotVenn3d : twoWayOverlap: no visible global function definition for
  'gpar'
plotVenn3d: no visible global function definition for 'grid.text'
plotVenn3d: no visible global function definition for 'gpar'
plotVenn3d: no visible global function definition for 'grid.polygon'
plotVenn4d : getCommonEllipse: no visible global function definition
  for 'aggregate'
plotVenn4d : region.polygon: no visible global function definition for
  'head'
plotVenn4d : region.polygon: no visible global function definition for
  'grid.polygon'
plotVenn4d : region.polygon: no visible global function definition for
  'gpar'
plotVenn4d: no visible global function definition for 'grid.text'
plotVenn4d: no visible global function definition for 'gpar'
plotVenn4d: no visible global function definition for 'pushViewport'
plotVenn4d: no visible global function definition for 'viewport'
plotVenn4d: no visible global function definition for 'grid.polygon'
plotVenn4d: no visible global function definition for 'upViewport'
resizeCircles: no visible global function definition for 'uniroot'
Undefined global functions or variables:
  aggregate gpar grid.polygon grid.text head pushViewport uniroot
  upViewport viewport
Consider adding
  importFrom("stats", "aggregate", "uniroot")
  importFrom("utils", "head")
to your NAMESPACE file.
Running examples in 'colorist-Ex.R' failed
The error most likely occurred in:

> ### Name: map_multiples
> ### Title: Visualize multiple distributions in a series of maps
> ### Aliases: map_multiples
> 
> ### ** Examples
> 
> # load fisher data
> data("fisher_ud")
> 
> # prepare data
> r <- metrics_pull(fisher_ud)
> 
> # generate palette
> pal <- palette_timeline(fisher_ud)
> 
> # produce maps, adjusting lambda_i to make areas that were used less
> # intensively more conspicuous
> map_multiples(r, pal, lambda_i = -5, labels = paste("night", 1:9))
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: map_multiples ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'introduction.Rmd' using rmarkdown
Linking to GEOS 3.8.0, GDAL 3.0.4, PROJ 6.3.1
Quitting from lines 153-161 (introduction.Rmd) 
Error: processing vignette 'introduction.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'introduction.Rmd'

--- re-building 'tuning.Rmd' using rmarkdown
Quitting from lines 87-91 (tuning.Rmd) 
Error: processing vignette 'tuning.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'tuning.Rmd'

SUMMARY: processing the following files failed:
  'introduction.Rmd' 'tuning.Rmd'

Error: Vignette re-building failed.
Execution halted
generateMonochromaticColors: no visible global function definition for
  'col2rgb'
generateMonochromaticColors: no visible global function definition for
  'rgb'
generateMonochromaticColors: no visible global function definition for
  'tail'
hsv2rgb: no visible global function definition for 'rgb'
rotational_dispersion: no visible global function definition for
  'col2rgb'
rotational_dispersion: no visible global function definition for
  'rgb2hsv'
tetradicColors: no visible global function definition for 'head'
triadicColors: no visible global function definition for 'head'
Undefined global functions or variables:
  col2rgb head rgb rgb2hsv tail
Consider adding
  importFrom("grDevices", "col2rgb", "rgb", "rgb2hsv")
  importFrom("utils", "head", "tail")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
primary.colors: no visible global function definition for 'rgb'
rgb.tables: no visible global function definition for 'rgb'
ygobb: no visible global function definition for 'approx'
ygobb: no visible global function definition for 'rgb'
Undefined global functions or variables:
  approx rgb
Consider adding
  importFrom("grDevices", "rgb")
  importFrom("stats", "approx")
to your NAMESPACE file.
installed size is  5.4Mb
  sub-directories of 1Mb or more:
    doc       2.6Mb
    extdata   2.0Mb
Malformed Description field: should contain one or more complete sentences.
installed size is  5.2Mb
  sub-directories of 1Mb or more:
    libs   3.9Mb
Package vignette with placeholder title 'Vignette Title':
  'colr.Rmd'
Malformed Description field: should contain one or more complete sentences.
competitive.test: no visible global function definition for 'runif'
selfcontained.test : fun2: no visible global function definition for
  'qchisq'
selfcontained.test: no visible global function definition for 'cov'
selfcontained.test: no visible global function definition for 'qchisq'
selfcontained.test: no visible global function definition for 'cor'
selfcontained.test: no visible global function definition for 'pchisq'
Undefined global functions or variables:
  cor cov pchisq qchisq runif
Consider adding
  importFrom("stats", "cor", "cov", "pchisq", "qchisq", "runif")
to your NAMESPACE file.
'library' or 'require' calls in package code:
  'lattice' 'rgl'
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/cometExactTest.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/CommEcol.Rcheck/00install.out' for details.
addxaxis: no visible global function definition for 'par'
addxaxis: no visible global function definition for 'axis'
addxaxis: no visible global function definition for 'mtext'
eplot: no visible global function definition for 'par'
eplot: no visible global function definition for 'axis'
eplot: no visible global function definition for 'mtext'
Undefined global functions or variables:
  axis mtext par
Consider adding
  importFrom("graphics", "axis", "mtext", "par")
to your NAMESPACE file.
compareC: no visible global function definition for 'pnorm'
Undefined global functions or variables:
  pnorm
Consider adding
  importFrom("stats", "pnorm")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
'library' or 'require' call to 'XML' which was already attached by Depends.
  Please remove these calls from your code.
Package in Depends field not imported from: 'XML'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
compareODM: no visible global function definition for 'xmlRoot'
compareODM: no visible global function definition for 'xmlTreeParse'
compareODM: no visible global function definition for 'xmlChildren'
compareODM: no visible global function definition for 'xmlAttrs'
compareODM: no visible global function definition for 'xmlValue'
Undefined global functions or variables:
  xmlAttrs xmlChildren xmlRoot xmlTreeParse xmlValue
installed size is  5.1Mb
  sub-directories of 1Mb or more:
    libs   4.6Mb
Package suggested but not available for checking: 'inSilicoDb'
Loading this package had a fatal error status code 1
Loading log:
Loading required package: Biobase
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:parallel':

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from 'package:stats':

    IQR, mad, sd, var, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, basename, cbind, colnames, dirname, do.call,
    duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
    lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
    pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
    tapply, union, unique, unsplit, which, which.max, which.min

Welcome to Bioconductor

    Vignettes contain introductory material; view with
    'browseVignettes()'. To cite Bioconductor, see
    'citation("Biobase")', and for packages 'citation("pkgname")'.

Loading required package: GEOquery
Error: package or namespace load failed for 'GEOquery' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Error: package 'GEOquery' could not be loaded
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/comperank.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/comperes.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/completejourney.Rcheck/00install.out' for details.
Package in Depends field not imported from: 'numDeriv'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
dcomplnorm: no visible global function definition for 'grad'
dcomplnorm : f1: no visible global function definition for 'dlnorm'
dcomplnorm : F1: no visible global function definition for 'plnorm'
dcomplnorm : f1L: no visible global function definition for 'dlnorm'
dcomplnorm : F1L: no visible global function definition for 'plnorm'
pcomplnorm: no visible global function definition for 'grad'
pcomplnorm : f1: no visible global function definition for 'dlnorm'
pcomplnorm : F1: no visible global function definition for 'plnorm'
pcomplnorm : F1L: no visible global function definition for 'plnorm'
qcomplnorm: no visible global function definition for 'grad'
qcomplnorm : f1: no visible global function definition for 'dlnorm'
qcomplnorm : F1q: no visible global function definition for 'qlnorm'
qcomplnorm : F1: no visible global function definition for 'plnorm'
rcomplnorm: no visible global function definition for 'runif'
Undefined global functions or variables:
  dlnorm grad plnorm qlnorm runif
Consider adding
  importFrom("stats", "dlnorm", "plnorm", "qlnorm", "runif")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
'library' or 'require' call to 'hypergeo' which was already attached by Depends.
  Please remove these calls from your code.
momentCompound: no visible global function definition for 'integrate'
pgfIhypergeometric: no visible global function definition for 'uniroot'
pgfIhyperpoisson: no visible global function definition for 'uniroot'
pgfIkattitypeh1: no visible global function definition for 'uniroot'
pgfIkattitypeh2: no visible global function definition for 'uniroot'
pgfIneymantypeb: no visible global function definition for 'uniroot'
pgfIneymantypec: no visible global function definition for 'uniroot'
pgfIpoissonlindley: no visible global function definition for 'uniroot'
pgfIthomas: no visible global function definition for 'uniroot'
pgfIwaring: no visible global function definition for 'uniroot'
pgfIyule: no visible global function definition for 'uniroot'
rCompound: no visible global function definition for 'runif'
Undefined global functions or variables:
  integrate runif uniroot
Consider adding
  importFrom("stats", "integrate", "runif", "uniroot")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/compstatr.Rcheck/00install.out' for details.
Error(s) in re-building vignettes:
--- re-building 'comtradr-vignette.Rmd' using rmarkdown
Quitting from lines 276-308 (comtradr-vignette.Rmd) 
Error: processing vignette 'comtradr-vignette.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'comtradr-vignette.Rmd'

SUMMARY: processing the following file failed:
  'comtradr-vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
kef: no visible global function definition for 'dgamma'
kef: no visible global function definition for 'dlnorm'
simp_int: no visible global function definition for 'approx'
Undefined global functions or variables:
  approx dgamma dlnorm
Consider adding
  importFrom("stats", "approx", "dgamma", "dlnorm")
to your NAMESPACE file.
Running examples in 'concaveman-Ex.R' failed
The error most likely occurred in:

> ### Name: concaveman
> ### Title: concaveman: A very fast 2D concave hull algorithm.
> ### Aliases: concaveman concaveman.matrix concaveman.sf
> 
> ### ** Examples
> 
> data(points)
> polygons <- concaveman(points)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: concaveman ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Running 'testthat.R' [3s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(concaveman)
  > 
  > test_check("concaveman")
  -- 1. Error: input and output formats works correctly (@test_concaveman.R#8)  --
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. testthat::expect_s3_class(concaveman(points), "sf")
    5. concaveman:::concaveman.sf(points)
   11. dplyr::summarise(...)
   15. base::getExportedValue(pkg, name)
   16. base::asNamespace(ns)
   17. base::getNamespace(ns)
   18. base::loadNamespace(name)
   19. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 1 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: input and output formats works correctly (@test_concaveman.R#8) 
  
  Error: testthat unit tests failed
  Execution halted
Found the following sources/headers with CR or CRLF line endings:
  inst/include/ConConPiWiFun.h
  inst/include/convex_function_manip.hpp
  inst/include/convex_functions_tools.hpp
  inst/include/cplfunction.hpp
  inst/include/cplfunctionvec.hpp
  inst/include/cpqfunction.hpp
  inst/include/cpqfunctionvec.hpp
Some Unix compilers require LF line endings.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/concordance.Rcheck/00install.out' for details.
prepare_Rd: concor.Rd:4: Dropping empty section \keyword
prepare_Rd: concor.Rd:5: Dropping empty section \keyword
prepare_Rd: concorcano.Rd:4: Dropping empty section \keyword
prepare_Rd: concorcano.Rd:5: Dropping empty section \keyword
prepare_Rd: concoreg.Rd:4: Dropping empty section \keyword
prepare_Rd: concoreg.Rd:5: Dropping empty section \keyword
prepare_Rd: concorgm.Rd:4: Dropping empty section \keyword
prepare_Rd: concorgm.Rd:5: Dropping empty section \keyword
prepare_Rd: concorgmcano.Rd:4: Dropping empty section \keyword
prepare_Rd: concorgmcano.Rd:5: Dropping empty section \keyword
prepare_Rd: concorgmreg.Rd:4: Dropping empty section \keyword
prepare_Rd: concorgmreg.Rd:5: Dropping empty section \keyword
prepare_Rd: concors.Rd:4: Dropping empty section \keyword
prepare_Rd: concors.Rd:5: Dropping empty section \keyword
prepare_Rd: concorscano.Rd:4: Dropping empty section \keyword
prepare_Rd: concorscano.Rd:5: Dropping empty section \keyword
prepare_Rd: concorsreg.Rd:4: Dropping empty section \keyword
prepare_Rd: concorsreg.Rd:5: Dropping empty section \keyword
prepare_Rd: svdbip.Rd:4: Dropping empty section \keyword
prepare_Rd: svdbip.Rd:5: Dropping empty section \keyword
prepare_Rd: svdbip2.Rd:4: Dropping empty section \keyword
prepare_Rd: svdbip2.Rd:5: Dropping empty section \keyword
prepare_Rd: svdbips.Rd:4: Dropping empty section \keyword
prepare_Rd: svdbips.Rd:5: Dropping empty section \keyword
prepare_Rd: svdcp.Rd:4: Dropping empty section \keyword
prepare_Rd: svdcp.Rd:5: Dropping empty section \keyword
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/CONCUR.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/concurve.Rcheck/00install.out' for details.
K1.norm: no visible global function definition for 'dnorm'
K1.norm: no visible global function definition for 'pnorm'
K1.t3: no visible global function definition for 'pt'
K2.norm: no visible global function definition for 'dnorm'
K2.norm: no visible global function definition for 'pnorm'
K2.t3: no visible global function definition for 'pt'
Undefined global functions or variables:
  dnorm pnorm pt
Consider adding
  importFrom("stats", "dnorm", "pnorm", "pt")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/CONDOP.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
ml_solver: no visible global function definition for 'approx'
select_kmax: no visible global function definition for 'median'
Undefined global functions or variables:
  approx median
Consider adding
  importFrom("stats", "approx", "median")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/configural.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/confoundr.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
conicPlot: no visible global function definition for 'palette'
conicPlotAsymptotes: no visible global function definition for
  'palette'
conicPlotAsymptotes: no visible global function definition for 'abline'
conicPlotAxes: no visible global function definition for 'palette'
conicPlotAxes: no visible global function definition for 'abline'
plotDegenerateConic: no visible global function definition for 'points'
plotDegenerateConic: no visible global function definition for 'abline'
plotEllipsis: no visible global function definition for 'lines'
plotEllipsis: no visible global function definition for 'points'
plotHyperbola: no visible global function definition for 'lines'
plotHyperbola: no visible global function definition for 'points'
plotParabola: no visible global function definition for 'lines'
Undefined global functions or variables:
  abline lines palette points
Consider adding
  importFrom("grDevices", "palette")
  importFrom("graphics", "abline", "lines", "points")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/Conigrave.Rcheck/00install.out' for details.
Malformed Title field: should not end in a period.
'library' or 'require' call to 'parallel' which was already attached by Depends.
  Please remove these calls from your code.
'library' or 'require' calls in package code:
  'Rmpi' 'snow'
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Package in Depends field not imported from: 'parallel'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
ConjointChecks: no visible global function definition for 'makeCluster'
ConjointChecks: no visible global function definition for
  'clusterSetRNGStream'
ConjointChecks: no visible global function definition for
  'clusterApply'
ConjointChecks: no visible global function definition for 'stopCluster'
omni.check: no visible global function definition for 'runif'
omni.check: no visible global function definition for 'quantile'
plot.checks: no visible global function definition for 'mtext'
plot.checks: no visible global function definition for 'text'
Undefined global functions or variables:
  clusterApply clusterSetRNGStream makeCluster mtext quantile runif
  stopCluster text
Consider adding
  importFrom("graphics", "mtext", "text")
  importFrom("stats", "quantile", "runif")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/conjoint.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/connections.Rcheck/00install.out' for details.
installed size is  8.8Mb
  sub-directories of 1Mb or more:
    libs   7.6Mb
GNU make is a SystemRequirements.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ContaminatedMixt.Rcheck/00install.out' for details.
Running 'testthat.R' [5s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(contrast)
  > 
  > test_check("contrast")
  -- 1. Error: (unknown) (@test-geese.R#5)  --------------------------------------
  package or namespace load failed for 'geepack' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::library(geepack)
   2. base::tryCatch(...)
   3. base:::tryCatchList(expr, classes, parentenv, handlers)
   4. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   5. value[[3L]](cond)
  
  == testthat results  ===========================================================
  [ OK: 6 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: (unknown) (@test-geese.R#5) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'contrast.Rmd' using rmarkdown
Quitting from lines 12-26 (contrast.Rmd) 
Error: processing vignette 'contrast.Rmd' failed with diagnostics:
package or namespace load failed for 'geepack' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'contrast.Rmd'

SUMMARY: processing the following file failed:
  'contrast.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'contribution-Ex.R' failed
The error most likely occurred in:

> ### Name: generate
> ### Title: Generate contribution table
> ### Aliases: generate
> 
> ### ** Examples
> 
> library(contribution)
> library(ggplot2)
> 
> # Paper contributions
> generate(demo)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: generate ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Running examples in 'convergEU-Ex.R' failed
The error most likely occurred in:

> ### Name: abso_change
> ### Title: Absolute change
> ### Aliases: abso_change
> 
> ### ** Examples
> 
> 
> # Example 1
> # Sorted dataframe in the format years by countries:
> require(tibble)
Loading required package: tibble
> testTB <- dplyr::tribble(
+ ~years, ~countryA ,  ~countryB,  ~countryC,
+ 2000,     0.8,   2.7,    3.9,
+ 2001,     1.2,   3.2,    4.2,
+ 2002,     0.9,   2.9,    4.1,
+ 2003,     1.3,   2.9,    4.0,
+ 2004,     1.2,   3.1,    4.1,
+ 2005,     1.2,   3.0,    4.0)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: :: ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'PATTERNS-CONV.Rmd' using rmarkdown
Quitting from lines 23-48 (PATTERNS-CONV.Rmd) 
Error: processing vignette 'PATTERNS-CONV.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'PATTERNS-CONV.Rmd'

--- re-building 'measuring-convergence.Rmd' using rmarkdown
Quitting from lines 28-48 (measuring-convergence.Rmd) 
Error: processing vignette 'measuring-convergence.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'measuring-convergence.Rmd'

SUMMARY: processing the following files failed:
  'PATTERNS-CONV.Rmd' 'measuring-convergence.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/coopProductGame.Rcheck/00install.out' for details.
maCooperative: no visible global function definition for 'points'
maCooperative: no visible global function definition for 'legend'
maPessimistic: no visible global function definition for 'combn'
maRules: no visible global function definition for 'capture.output'
mstCooperative: no visible global function definition for 'points'
mstCooperative: no visible global function definition for 'legend'
mstOptimistic: no visible global function definition for 'combn'
mstPessimistic: no visible global function definition for 'combn'
mstRules: no visible global function definition for 'capture.output'
plotCoreSet: no visible global function definition for 'points'
plotCoreSet: no visible global function definition for 'polygon'
plotImputationSet: no visible global function definition for 'par'
plotImputationSet: no visible global function definition for 'box'
plotImputationSet: no visible global function definition for 'polygon'
plotImputationSet: no visible global function definition for 'text'
shapleyValue: no visible global function definition for 'combn'
Undefined global functions or variables:
  box capture.output combn legend par points polygon text
Consider adding
  importFrom("graphics", "box", "legend", "par", "points", "polygon",
             "text")
  importFrom("utils", "capture.output", "combn")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/CoordinateCleaner.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/coprimary.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/cops.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/CopulaCenR.Rcheck/00install.out' for details.
installed size is  8.4Mb
  sub-directories of 1Mb or more:
    R     2.1Mb
    doc   4.3Mb
advanceRNG: no visible global function definition for 'runif'
randomEventMoves: no visible global function definition for 'runif'
randomRescaledEventMoves: no visible global function definition for
  'runif'
Undefined global functions or variables:
  runif
Consider adding
  importFrom("stats", "runif")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/coreSim.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
coreTDT_geneset: no visible global function definition for
  'write.table'
pvalue_calculator: no visible global function definition for 'dbinom'
Undefined global functions or variables:
  dbinom write.table
Consider adding
  importFrom("stats", "dbinom")
  importFrom("utils", "write.table")
to your NAMESPACE file.
compute.llh: no visible global function definition for 'dnorm'
compute.u.hat.simple: no visible global function definition for 'dnorm'
fit.CLM.1u.simple.start: no visible global function definition for
  'kmeans'
fit.CLMM.simple.start: no visible global function definition for
  'kmeans'
fit.CLMM.simple.start.NA: no visible global function definition for
  'kmeans'
Undefined global functions or variables:
  dnorm kmeans
Consider adding
  importFrom("stats", "dnorm", "kmeans")
to your NAMESPACE file.
Running examples in 'coronavirus-Ex.R' failed
The error most likely occurred in:

> ### Name: coronavirus
> ### Title: The 2019 Novel Coronavirus COVID-19 (2019-nCoV) Dataset
> ### Aliases: coronavirus
> ### Keywords: COVID19 coronavirus datasets
> 
> ### ** Examples
> 
> data(coronavirus)
> 
> require(dplyr)
Loading required package: dplyr
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
> 
> # Get top confirmed cases by state
> coronavirus %>%
+   filter(type == "confirmed") %>%
+   group_by(country) %>%
+   summarise(total = sum(cases)) %>%
+   arrange(-total) %>%
+   head(20)
Error in coronavirus %>% filter(type == "confirmed") %>% group_by(country) %>%  : 
  could not find function "%>%"
Execution halted
Running examples in 'corporaexplorer-Ex.R' failed
The error most likely occurred in:

> ### Name: demo_jane_austen
> ### Title: Demo app: Jane Austen's novels
> ### Aliases: demo_jane_austen run_janeausten_app create_janeausten_app
> 
> ### ** Examples
> 
> ## Create corporaexplorerobject for demo app:
> jane_austen <- create_janeausten_app()
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: create_janeausten_app ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Running 'testthat.R' [3s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(corporaexplorer)
  > 
  > test_check("corporaexplorer")
  -- 1. Error: prepare_data() works (@test_prep_func.R#9)  -----------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. corporaexplorer:::create_test_data()
    3. corporaexplorer:::prepare_data.data.frame(test_df)
    4. corporaexplorer:::transform_regular(dataset, tile_length_range)
    5. dplyr::arrange
    6. base::getExportedValue(pkg, name)
    7. base::asNamespace(ns)
    8. base::getNamespace(ns)
    9. base::loadNamespace(name)
   10. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 0 | SKIPPED: 2 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: prepare_data() works (@test_prep_func.R#9) 
  
  Error: testthat unit tests failed
  Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/CorrBin.Rcheck/00install.out' for details.
installed size is  5.6Mb
  sub-directories of 1Mb or more:
    extdata   3.2Mb
    libs      2.0Mb
Package suggested but not available for checking: 'ProData'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/correlationfunnel.Rcheck/00install.out' for details.
installed size is  7.0Mb
  sub-directories of 1Mb or more:
    doc   6.9Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/corrr.Rcheck/00install.out' for details.
BugReports field is not a suitable URL but contains an email address:
   use the Contact field instead
corr.Qmatrix: no visible global function definition for 'cor'
corr.Qmatrix: no visible global function definition for 'cor.test'
summarise.Fst: no visible global function definition for 'cor'
summarise.Fst: no visible global function definition for 'sd'
summarise.lnPD: no visible global function definition for 'sd'
Undefined global functions or variables:
  cor cor.test sd
Consider adding
  importFrom("stats", "cor", "cor.test", "sd")
to your NAMESPACE file.
dist: no visible global function definition for 'quantile'
edgecount: no visible global function definition for 'reshape'
edgecutoff: no visible global function definition for 'boxplot'
edgecutoff: no visible global function definition for 'sd'
edgecutoff: no visible global function definition for 'median'
edgecutoff: no visible global function definition for 'IQR'
Undefined global functions or variables:
  IQR boxplot median quantile reshape sd
Consider adding
  importFrom("graphics", "boxplot")
  importFrom("stats", "IQR", "median", "quantile", "reshape", "sd")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/corto.Rcheck/00install.out' for details.
Running 'testthat.R' [6s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(corx)
  > 
  > test_check("corx")
  -- 1. Error: plot_mds can deal with no groups (@test_matrix.R#374)  ------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. corx::plot_mds(corx(mtcars))
    2. ggpubr::ggscatter
    3. base::getExportedValue(pkg, name)
    4. base::asNamespace(ns)
    5. base::getNamespace(ns)
    6. base::loadNamespace(name)
    9. base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
   10. base::library.dynam(lib, package, package.lib)
  
  -- 2. Error:  k = "auto" works (@test_matrix.R#383)  ---------------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. corx::plot_mds(corx(mtcars), k = "auto")
    2. ggpubr::ggscatter
    3. base::getExportedValue(pkg, name)
    4. base::asNamespace(ns)
    5. base::getNamespace(ns)
    6. base::loadNamespace(name)
    9. base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
   10. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 59 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 2 ]
  1. Error: plot_mds can deal with no groups (@test_matrix.R#374) 
  2. Error:  k = "auto" works (@test_matrix.R#383) 
  
  Error: testthat unit tests failed
  Execution halted
Malformed Description field: should contain one or more complete sentences.
GA_search : subset_score: no visible global function definition for
  'combn'
choose_lambda : subset_score: no visible global function definition for
  'combn'
cond.fyx: no visible global function definition for 'var'
cond.fyx: no visible global function definition for 'cor'
diff_gen_PPI: no visible global function definition for 'cov'
diff_gen_PPI: no visible global function definition for 'sd'
f.test: no visible binding for global variable 'var'
get_quantiles : node_edge: no visible global function definition for
  'combn'
score_scaling: no visible global function definition for 'hist'
score_scaling: no visible global function definition for 'sd'
Undefined global functions or variables:
  combn cor cov hist sd var
Consider adding
  importFrom("graphics", "hist")
  importFrom("stats", "cor", "cov", "sd", "var")
  importFrom("utils", "combn")
to your NAMESPACE file.
cosinor.lm: no visible binding for global variable 'na.omit'
cosinor.lm: no visible global function definition for 'terms'
cosinor.lm: no visible global function definition for 'as.formula'
cosinor.lm: no visible global function definition for 'lm'
cosinor_analyzer: no visible binding for global variable 'vitamind'
cosinor_analyzer : <anonymous>: no visible global function definition
  for 'as.formula'
ggplot.cosinor.lm: no visible global function definition for 'predict'
predict.cosinor.lm: no visible global function definition for 'fitted'
predict.cosinor.lm: no visible global function definition for 'predict'
simulate_cosinor: no visible global function definition for 'runif'
simulate_cosinor: no visible global function definition for 'rbinom'
simulate_cosinor: no visible global function definition for 'rnorm'
summary.cosinor.lm: no visible global function definition for 'vcov'
summary.cosinor.lm: no visible global function definition for 'qnorm'
summary.cosinor.lm: no visible global function definition for 'pnorm'
test_cosinor: no visible global function definition for 'pchisq'
test_cosinor: no visible global function definition for 'pnorm'
Undefined global functions or variables:
  as.formula fitted lm na.omit pchisq pnorm predict qnorm rbinom rnorm
  runif terms vcov vitamind
Consider adding
  importFrom("stats", "as.formula", "fitted", "lm", "na.omit", "pchisq",
             "pnorm", "predict", "qnorm", "rbinom", "rnorm", "runif",
             "terms", "vcov")
to your NAMESPACE file.
Malformed Title field: should not end in a period.
D.M: no visible global function definition for 'integrate'
lookbackTime: no visible global function definition for 'integrate'
Undefined global functions or variables:
  integrate
Consider adding
  importFrom("stats", "integrate")
to your NAMESPACE file.
installed size is  5.7Mb
  sub-directories of 1Mb or more:
    doc   4.9Mb
Running examples in 'CoSMoS-Ex.R' failed
The error most likely occurred in:

> ### Name: stcfclayton
> ### Title: Clayton SpatioTemporal Correlation Structure
> ### Aliases: stcfclayton
> 
> ### ** Examples
> 
> 
> library(CoSMoS)
> library(plotly)
Error: package or namespace load failed for 'plotly' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Error(s) in re-building vignettes:
--- re-building 'vignette.Rmd' using rmarkdown
Order "p" limited to  1
`stat_bin()` using `bins = 30`. Pick better value with `binwidth`.
Order "p" limited to  4
`stat_bin()` using `bins = 30`. Pick better value with `binwidth`.
Order "p" limited to  30
`stat_bin()` using `bins = 30`. Pick better value with `binwidth`.
Order "p" limited to  20
`stat_bin()` using `bins = 30`. Pick better value with `binwidth`.
Order "p" limited to  30
Order "p" limited to  30
Order "p" limited to  30
Order "p" limited to  30
Order "p" limited to  30
Quitting from lines 187-206 (vignette.Rmd) 
Error: processing vignette 'vignette.Rmd' failed with diagnostics:
package or namespace load failed for 'plotly' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'vignette.Rmd'

SUMMARY: processing the following file failed:
  'vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
Malformed Title field: should not end in a period.
Packages in Depends field not imported from:
  'Rglpk' 'glmnet' 'parallel' 'quadprog'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/Countr.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/countyfloods.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/countytimezones.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/countyweather.Rcheck/00install.out' for details.
Running examples in 'coveffectsplot-Ex.R' failed
The error most likely occurred in:

> ### Name: forest_plot
> ### Title: Forest plot
> ### Aliases: forest_plot
> 
> ### ** Examples
> 
> library(dplyr)
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Error(s) in re-building vignettes:
--- re-building 'Exposure_Response_Example.Rmd' using rmarkdown
Quitting from lines 15-48 (Exposure_Response_Example.Rmd) 
Error: processing vignette 'Exposure_Response_Example.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'Exposure_Response_Example.Rmd'

--- re-building 'Introduction_to_coveffectsplot.Rmd' using rmarkdown
Quitting from lines 15-29 (Introduction_to_coveffectsplot.Rmd) 
Error: processing vignette 'Introduction_to_coveffectsplot.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'Introduction_to_coveffectsplot.Rmd'

--- re-building 'Pediatric_Cov_Sim.Rmd' using rmarkdown
Quitting from lines 16-36 (Pediatric_Cov_Sim.Rmd) 
Error: processing vignette 'Pediatric_Cov_Sim.Rmd' failed with diagnostics:
package or namespace load failed for 'tidyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'Pediatric_Cov_Sim.Rmd'

SUMMARY: processing the following files failed:
  'Exposure_Response_Example.Rmd' 'Introduction_to_coveffectsplot.Rmd'
  'Pediatric_Cov_Sim.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/covid19.analytics.Rcheck/00install.out' for details.
Running 'testthat.R' [3s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(covid19france)
  > 
  > test_check("covid19france")
  -- 1. Error: cleaning and averaging (@test-all.R#28)  --------------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. covid19france:::read_data()
    9. covid19france:::clean_data(.)
   10. dplyr::select(...)
   18. base::getExportedValue(pkg, name)
   19. base::asNamespace(ns)
   20. base::getNamespace(ns)
   21. base::loadNamespace(name)
   22. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 1 | SKIPPED: 0 | WARNINGS: 2 | FAILED: 1 ]
  1. Error: cleaning and averaging (@test-all.R#28) 
  
  Error: testthat unit tests failed
  Execution halted
Running 'testthat.R' [1s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(covid19mobility)
  > library(glue)
  > library(dplyr)
  Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'animating_covid19_mobility.Rmd' using rmarkdown
Quitting from lines 34-40 (animating_covid19_mobility.Rmd) 
Error: processing vignette 'animating_covid19_mobility.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'animating_covid19_mobility.Rmd'

--- re-building 'apple_cities_across_space_and_change.Rmd' using rmarkdown
Linking to GEOS 3.8.0, GDAL 3.0.4, PROJ 6.3.1
Quitting from lines 22-29 (apple_cities_across_space_and_change.Rmd) 
Error: processing vignette 'apple_cities_across_space_and_change.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'apple_cities_across_space_and_change.Rmd'

--- re-building 'google_work_v_play.Rmd' using rmarkdown
Quitting from lines 23-33 (google_work_v_play.Rmd) 
Error: processing vignette 'google_work_v_play.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'google_work_v_play.Rmd'

--- re-building 'plot_us_mobility.Rmd' using rmarkdown
Quitting from lines 20-26 (plot_us_mobility.Rmd) 
Error: processing vignette 'plot_us_mobility.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'plot_us_mobility.Rmd'

SUMMARY: processing the following files failed:
  'animating_covid19_mobility.Rmd'
  'apple_cities_across_space_and_change.Rmd' 'google_work_v_play.Rmd'
  'plot_us_mobility.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'covid19nytimes-Ex.R' failed
The error most likely occurred in:

> ### Name: covid19nytimes_counties_demo
> ### Title: Demo of US County-Level Data from the NY Times
> ### Aliases: covid19nytimes_counties_demo
> ### Keywords: covid19nytimes_counties
> 
> ### ** Examples
> 
> 
> data(covid19nytimes_states_demo)
> 
> require(dplyr)
Loading required package: dplyr
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
> 
> # Get top confirmed cases by county,state
> covid19nytimes_states_demo %>%
+   filter(data_type == "cases_total") %>%
+   filter(value == max(value))
Error in filter(., data_type == "cases_total") : 
  object 'data_type' not found
Calls: %>% ... eval -> eval -> _fseq -> freduce -> <Anonymous> -> filter
Execution halted
Error(s) in re-building vignettes:
--- re-building 'ny-times-bubble-map.Rmd' using rmarkdown
Loading required package: covid19nytimes
Loading required package: dplyr
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Quitting from lines 21-29 (ny-times-bubble-map.Rmd) 
Error: processing vignette 'ny-times-bubble-map.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'ny-times-bubble-map.Rmd'

SUMMARY: processing the following file failed:
  'ny-times-bubble-map.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/covLCA.Rcheck/00install.out' for details.
covreg.mcmc: no visible global function definition for 'model.frame'
covreg.mcmc: no visible global function definition for 'model.matrix'
covreg.mcmc: no visible global function definition for 'model.response'
covreg.mcmc: no visible global function definition for 'lm'
covreg.mcmc: no visible global function definition for 'rnorm'
covreg.mcmc: no visible global function definition for 'cov'
rmn: no visible global function definition for 'rnorm'
rwish: no visible global function definition for 'rnorm'
Undefined global functions or variables:
  cov lm model.frame model.matrix model.response rnorm
Consider adding
  importFrom("stats", "cov", "lm", "model.frame", "model.matrix",
             "model.response", "rnorm")
to your NAMESPACE file.
Running examples in 'cowplot-Ex.R' failed
The error most likely occurred in:

> ### Name: axis_canvas
> ### Title: Generates a canvas onto which one can draw axis-like objects.
> ### Aliases: axis_canvas
> 
> ### ** Examples
> 
> # annotate line graphs with labels on the right
> library(dplyr)
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Malformed Description field: should contain one or more complete sentences.
'library' or 'require' calls in package code:
  'parallel' 'snowfall'
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Packages in Depends field not imported from:
  'Matrix' 'prodlim'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
CoxBoost: no visible global function definition for 'Matrix'
CoxBoost: no visible binding for global variable 'sd'
CoxBoost: no visible global function definition for 'predict'
cv.CoxBoost : eval.fold: no visible global function definition for
  'predict'
cv.CoxBoost: no visible global function definition for 'mclapply'
cv.CoxBoost: no visible binding for global variable 'sd'
estimPVal: no visible global function definition for 'mclapply'
iCoxBoost: no visible global function definition for 'terms'
iCoxBoost: no visible global function definition for 'model.response'
iCoxBoost: no visible global function definition for 'model.frame'
iCoxBoost: no visible global function definition for 'model.matrix'
iCoxBoost: no visible global function definition for 'Matrix'
plot.CoxBoost: no visible global function definition for 'lines'
plot.CoxBoost: no visible global function definition for 'text'
predict.iCoxBoost: no visible global function definition for
  'model.response'
predict.iCoxBoost: no visible global function definition for
  'model.frame'
predict.iCoxBoost: no visible global function definition for
  'model.matrix'
Undefined global functions or variables:
  Matrix lines mclapply model.frame model.matrix model.response predict
  sd terms text
Consider adding
  importFrom("graphics", "lines", "text")
  importFrom("stats", "model.frame", "model.matrix", "model.response",
             "predict", "sd", "terms")
to your NAMESPACE file.
Running examples in 'coxed-Ex.R' failed
The error most likely occurred in:

> ### Name: baseline.plot
> ### Title: Plot the simulated baseline functions
> ### Aliases: baseline.plot
> 
> ### ** Examples
> 
> simdata <- sim.survdata(N=1000, T=100, num.data.frames=1)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: sim.survdata ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'coxed.Rmd' using rmarkdown
Loading required package: rms
Loading required package: Hmisc
Loading required package: lattice
Loading required package: survival
Loading required package: Formula
Loading required package: ggplot2

Attaching package: 'Hmisc'

The following objects are masked from 'package:base':

    format.pval, units

Loading required package: SparseM

Attaching package: 'SparseM'

The following object is masked from 'package:base':

    backsolve

Loading required package: mgcv
Loading required package: nlme
This is mgcv 1.8-32. For overview type 'help("mgcv-package")'.
Quitting from lines 25-28 (coxed.Rmd) 
Error: processing vignette 'coxed.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'coxed.Rmd'

--- re-building 'simulating_survival_data.Rmd' using rmarkdown
Loading required package: rms
Loading required package: Hmisc
Loading required package: lattice
Loading required package: survival
Loading required package: Formula
Loading required package: ggplot2

Attaching package: 'Hmisc'

The following objects are masked from 'package:base':

    format.pval, units

Loading required package: SparseM

Attaching package: 'SparseM'

The following object is masked from 'package:base':

    backsolve

Loading required package: mgcv
Loading required package: nlme
This is mgcv 1.8-32. For overview type 'help("mgcv-package")'.
Quitting from lines 34-35 (simulating_survival_data.Rmd) 
Error: processing vignette 'simulating_survival_data.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'simulating_survival_data.Rmd'

SUMMARY: processing the following files failed:
  'coxed.Rmd' 'simulating_survival_data.Rmd'

Error: Vignette re-building failed.
Execution halted
coxaalen: no visible global function definition for 'terms'
coxaalen: no visible global function definition for 'model.matrix'
coxaalen: no visible binding for global variable 'frame'
coxaalen: no visible global function definition for 'update.formula'
coxaalen: no visible global function definition for 'capture.output'
coxdual: no visible global function definition for 'terms'
coxdual: no visible global function definition for 'model.matrix'
coxdual: no visible binding for global variable 'frame'
coxdual: no visible global function definition for 'update.formula'
coxdual: no visible global function definition for 'as.formula'
coxdual: no visible global function definition for 'capture.output'
frame.assign: no visible global function definition for 'model.matrix'
linapprox: no visible global function definition for 'approx'
print.coxinterval: no visible global function definition for 'pchisq'
print.summary.coxinterval : f: no visible global function definition
  for 'printCoefmat'
step2stepfun : f: no visible global function definition for 'stepfun'
summary.coxinterval : f: no visible global function definition for
  'pchisq'
summary.coxinterval : f: no visible global function definition for
  'qnorm'
Undefined global functions or variables:
  approx as.formula capture.output frame model.matrix pchisq
  printCoefmat qnorm stepfun terms update.formula
Consider adding
  importFrom("graphics", "frame")
  importFrom("stats", "approx", "as.formula", "model.matrix", "pchisq",
             "printCoefmat", "qnorm", "stepfun", "terms",
             "update.formula")
  importFrom("utils", "capture.output")
to your NAMESPACE file.
GNU make is a SystemRequirements.
Malformed Description field: should contain one or more complete sentences.
Package in Depends field not imported from: 'survival'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
coxr: no visible global function definition for 'model.extract'
coxr: no visible global function definition for 'model.matrix'
coxr.draw: no visible global function definition for 'lines'
coxr.draw: no visible global function definition for 'points'
coxr.fit: no visible global function definition for 'quantile'
gen_data: no visible global function definition for 'rnorm'
gen_data: no visible global function definition for 'rexp'
plot.coxr: no visible global function definition for 'quantile'
plot.coxr: no visible global function definition for 'par'
plot.coxr: no visible global function definition for 'mtext'
plot.coxr: no visible global function definition for 'title'
plot.coxr: no visible global function definition for 'split.screen'
plot.coxr: no visible global function definition for 'screen'
plot.coxr: no visible global function definition for 'close.screen'
print.coxr: no visible global function definition for 'pnorm'
print.coxr: no visible global function definition for 'pchisq'
Undefined global functions or variables:
  close.screen lines model.extract model.matrix mtext par pchisq pnorm
  points quantile rexp rnorm screen split.screen title
Consider adding
  importFrom("graphics", "close.screen", "lines", "mtext", "par",
             "points", "screen", "split.screen", "title")
  importFrom("stats", "model.extract", "model.matrix", "pchisq", "pnorm",
             "quantile", "rexp", "rnorm")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/cp4p.Rcheck/00install.out' for details.
Package in Depends field not imported from: 'tcltk'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Malformed Description field: should contain one or more complete sentences.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0gcc8/cplexAPI.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/Cprob.Rcheck/00install.out' for details.
Running examples in 'cpr-Ex.R' failed
The error most likely occurred in:

> ### Name: bsplineD
> ### Title: B-spline Derivatives
> ### Aliases: bsplineD
> 
> ### ** Examples
> 
> 
> set.seed(42)
> 
> xvec <- seq(0.1, 9.9, length = 1000)
> iknots <- sort(runif(rpois(1, 3), 1, 9))
> bknots <- c(0, 10)
> 
> # basis matrix and the first and second derivatives thereof, for cubic (order =
> # 4) b-splines
> bmat  <- bsplines(xvec, iknots, bknots = bknots)
> bmat1 <- bsplineD(xvec, iknots, bknots = bknots, derivative = 1)
> bmat2 <- bsplineD(xvec, iknots, bknots = bknots, derivative = 2)
> 
> # control polygon ordinates
> theta <- runif(length(iknots) + 4L, -5, 5)
> 
> # plot data
> plot_data <-
+   dplyr::data_frame(x = xvec,
+                     Spline = as.numeric(bmat %*% theta),
+                     "First Derivative" = as.numeric(bmat1 %*% theta),
+                     "Second Derivative" = as.numeric(bmat2 %*% theta))
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: :: ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Running 'testthat.R' [2s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(cpr)
  > 
  > test_check("cpr")
  -- 1. Error: A known spline can be recovered. (@test-recover-know-spline.R#57)  
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. testthat::expect_true(recover_spline(start_with = 40L, progress = FALSE)$recovered)
    4. cpr:::recover_spline(start_with = 40L, progress = FALSE)
    6. cpr:::cp.cpr_bs(true_bmat, true_theta, ...)
    7. dplyr::data_frame
    8. base::getExportedValue(pkg, name)
    9. base::asNamespace(ns)
   10. base::getNamespace(ns)
   11. base::loadNamespace(name)
   12. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 18 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: A known spline can be recovered. (@test-recover-know-spline.R#57) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'cpr-pkg.Rmd' using rmarkdown
Quitting from lines 79-84 (cpr-pkg.Rmd) 
Error: processing vignette 'cpr-pkg.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'cpr-pkg.Rmd'

SUMMARY: processing the following file failed:
  'cpr-pkg.Rmd'

Error: Vignette re-building failed.
Execution halted
Error(s) in re-building vignettes:
--- re-building 'introduction.Rmd' using rmarkdown
Quitting from lines 59-391 (introduction.Rmd) 
Error: processing vignette 'introduction.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'introduction.Rmd'

SUMMARY: processing the following file failed:
  'introduction.Rmd'

Error: Vignette re-building failed.
Execution halted
QR.cd: no visible global function definition for 'quantile'
QR.lasso.cd: no visible global function definition for 'quantile'
cqr.cd: no visible global function definition for 'quantile'
cqr.lasso.cd: no visible global function definition for 'quantile'
cqr.lasso.mm: no visible global function definition for 'quantile'
cqr.mm: no visible global function definition for 'quantile'
Undefined global functions or variables:
  quantile
Consider adding
  importFrom("stats", "quantile")
to your NAMESPACE file.
distance.comoving: no visible global function definition for
  'integrate'
Undefined global functions or variables:
  integrate
Consider adding
  importFrom("stats", "integrate")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/crandep.Rcheck/00install.out' for details.
installed size is  8.1Mb
  sub-directories of 1Mb or more:
    doc   7.9Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/CRANsearcher.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
crantastic.submitInstalledPackages: no visible global function
  definition for 'installed.packages'
postData: no visible global function definition for 'make.socket'
postData: no visible global function definition for 'write.socket'
postData: no visible global function definition for 'read.socket'
postData: no visible global function definition for 'close.socket'
Undefined global functions or variables:
  close.socket installed.packages make.socket read.socket write.socket
Consider adding
  importFrom("utils", "close.socket", "installed.packages",
             "make.socket", "read.socket", "write.socket")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/crawl.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
cm.CVaR: no visible global function definition for 'quantile'
cm.hist: no visible global function definition for 'hist'
cm.quantile: no visible global function definition for 'qnorm'
cm.rnorm: no visible global function definition for 'rnorm'
Undefined global functions or variables:
  hist qnorm quantile rnorm
Consider adding
  importFrom("graphics", "hist")
  importFrom("stats", "qnorm", "quantile", "rnorm")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/cricketr.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/crimedata.Rcheck/00install.out' for details.
BugReports field is not a suitable URL but contains an email address:
   use the Contact field instead
Package vignette with placeholder title 'Vignette Title':
  'guidelines.Rmd'
'library' or 'require' call to 'RCurl' which was already attached by Depends.
  Please remove these calls from your code.
Packages in Depends field not imported from:
  'RCurl' 'chron'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
collateDaily: no visible global function definition for 'read.table'
collateDaily: no visible global function definition for 'write.table'
collateHourly: no visible global function definition for 'read.table'
collateHourly: no visible global function definition for 'write.table'
downloadCRN: no visible global function definition for 'download.file'
getUrlsCRN: no visible global function definition for 'getURL'
writeDataset: no visible global function definition for 'read.table'
writeDataset: no visible global function definition for 'write.table'
Undefined global functions or variables:
  download.file getURL read.table write.table
Consider adding
  importFrom("utils", "download.file", "read.table", "write.table")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/CropDetectR.Rcheck/00install.out' for details.
get.plan: no visible global function definition for 'menu'
Undefined global functions or variables:
  menu
Consider adding
  importFrom("utils", "menu")
to your NAMESPACE file.
Package in Depends field not imported from: 'survival'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
crossmatchtest: no visible global function definition for 'pnorm'
Undefined global functions or variables:
  pnorm
Consider adding
  importFrom("stats", "pnorm")
to your NAMESPACE file.
BootC : BSs: no visible global function definition for 'lm'
BootC : BSs: no visible global function definition for 'vcov'
BootC: no visible global function definition for 'boot'
BootC: no visible global function definition for 'boot.ci'
DeltaC: no visible global function definition for 'lm'
DeltaC: no visible global function definition for 'vcov'
FiellerC: no visible global function definition for 'lm'
FiellerC: no visible global function definition for 'vcov'
nonLinearC: no visible global function definition for 'nls'
Undefined global functions or variables:
  boot boot.ci lm nls vcov
Consider adding
  importFrom("stats", "lm", "nls", "vcov")
to your NAMESPACE file.
Package vignette with placeholder title 'Vignette Title':
  'vignettecrossrun.Rmd'
Running examples in 'crosswalkr-Ex.R' failed
The error most likely occurred in:

> ### Name: encodefrom
> ### Title: Encode data frame column using external crosswalk file.
> ### Aliases: encodefrom encodefrom_
> 
> ### ** Examples
> 
> df <- data.frame(state = c('Kentucky','Tennessee','Virginia'),
+                  stfips = c(21,47,51),
+                  cenregnm = c('South','South','South'))
> 
> df_tbl <- tibble::as_tibble(df)
> 
> cw <- get(data(stcrosswalk))
> 
> df$state2 <- encodefrom(df, state, cw, stname, stfips, stabbr)
> df_tbl$state2 <- encodefrom(df_tbl, state, cw, stname, stfips, stabbr)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: encodefrom ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Running 'testthat.R' [3s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(crosswalkr)
  > 
  > test_check("crosswalkr")
  -- 1. Error: (unknown) (@test-encodefrom.R#32)  --------------------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. crosswalkr::encodefrom(...)
    2. crosswalkr::encodefrom_(...)
    3. labelled::labelled
    4. base::getExportedValue(pkg, name)
    5. base::asNamespace(ns)
    6. base::getNamespace(ns)
    7. base::loadNamespace(name)
   10. base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
   11. base::library.dynam(lib, package, package.lib)
  
  -- 2. Error: (unknown) (@test-renamefrom.R#44)  --------------------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. crosswalkr::renamefrom(df, crosswalk_file, raw_1, clean_1, label_1)
    2. crosswalkr::renamefrom_(...)
    3. labelled::`var_label<-`
    4. base::getExportedValue(pkg, name)
    5. base::asNamespace(ns)
    6. base::getNamespace(ns)
    7. base::loadNamespace(name)
   10. base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
   11. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 30 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 2 ]
  1. Error: (unknown) (@test-encodefrom.R#32) 
  2. Error: (unknown) (@test-renamefrom.R#44) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'collapse.Rmd' using rmarkdown
Quitting from lines 64-67 (collapse.Rmd) 
Error: processing vignette 'collapse.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'collapse.Rmd'

--- re-building 'crosswalkr.Rmd' using rmarkdown
Quitting from lines 56-60 (crosswalkr.Rmd) 
Error: processing vignette 'crosswalkr.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'crosswalkr.Rmd'

SUMMARY: processing the following files failed:
  'collapse.Rmd' 'crosswalkr.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'crossword.r-Ex.R' failed
The error most likely occurred in:

> ### Name: Crossword
> ### Title: Crossword
> ### Aliases: Crossword
> ### Keywords: datasets
> 
> ### ** Examples
> 
> 
> library(crossword.r)
> cw <- Crossword$new(rows = 4, columns = 4)
> cw$add_words(c("back", "nasa", "kick", "nuk", "ic", "sic"))
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: <Anonymous> ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Running 'testthat.R' [2s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(crossword.r)
  > 
  > test_check("crossword.r")
  -- 1. Error: things work in general (@test_general.R#11)  ----------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. testthat::expect_silent(...)
    9. cw$add_words(words = c("ha", "albert"))
   10. private$add_word(word = words[i], clue = clues[i])
   11. private$update_grid_data()
   12. dplyr::anti_join
   13. base::getExportedValue(pkg, name)
   14. base::asNamespace(ns)
   15. base::getNamespace(ns)
   16. base::loadNamespace(name)
   17. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 1 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: things work in general (@test_general.R#11) 
  
  Error: testthat unit tests failed
  Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/CRPClustering.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/crplyr.Rcheck/00install.out' for details.
Warning: no function found corresponding to methods exports from 'CR' for: 'show'

A namespace must be able to be loaded with just the base namespace
loaded: otherwise if the namespace gets loaded by a saved object, the
session will be unable to start.

Probably some imports need to be declared in the NAMESPACE file.
Package in Depends field not imported from: 'methods'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
curerate : cr: no visible global function definition for 'rbinom'
curerate : cr: no visible global function definition for 'rexp'
curerate : cr: no visible global function definition for 'runif'
curerate: no visible global function definition for 'new'
showcr: no visible global function definition for 'show'
Undefined global functions or variables:
  new rbinom rexp runif show
Consider adding
  importFrom("methods", "new", "show")
  importFrom("stats", "rbinom", "rexp", "runif")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
crrp: no visible global function definition for 'approx'
gcrrp: no visible global function definition for 'approx'
Undefined global functions or variables:
  approx
Consider adding
  importFrom("stats", "approx")
to your NAMESPACE file.
crrc: no visible binding for global variable 'na.omit'
crrs: no visible binding for global variable 'na.omit'
mycrr: no visible binding for global variable 'na.omit'
mycrr.test: no visible binding for global variable 'na.omit'
print.crrs: no visible global function definition for 'pnorm'
psh.test: no visible global function definition for 'pchisq'
Undefined global functions or variables:
  na.omit pchisq pnorm
Consider adding
  importFrom("stats", "na.omit", "pchisq", "pnorm")
to your NAMESPACE file.
crrstep : crr.makecov1: no visible global function definition for
  'model.matrix'
crrstep : crr.dropterm: no visible global function definition for
  'terms'
crrstep : crr.dropterm: no visible global function definition for
  'as.formula'
crrstep : crr.addterm: no visible global function definition for
  'terms'
crrstep : crr.addterm: no visible global function definition for
  'as.formula'
crrstep: no visible global function definition for 'as.formula'
crrstep: no visible global function definition for 'terms'
crrstep: no visible global function definition for 'model.frame'
crrstep: no visible binding for global variable 'na.pass'
crrstep: no visible global function definition for 'update'
crrstep: no visible global function definition for 'drop.terms'
Undefined global functions or variables:
  as.formula drop.terms model.frame model.matrix na.pass terms update
Consider adding
  importFrom("stats", "as.formula", "drop.terms", "model.frame",
             "model.matrix", "na.pass", "terms", "update")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/crsra.Rcheck/00install.out' for details.
installed size is  8.3Mb
  sub-directories of 1Mb or more:
    doc    1.1Mb
    libs   6.3Mb
Running 'testthat.R' [5s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(crtests)
  > 
  > test_check("crtests")
  -- 1. Error: (unknown) (@test.runtest.R#3)  ------------------------------------
  package or namespace load failed for 'caret' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::library(caret)
   2. base::tryCatch(...)
   3. base:::tryCatchList(expr, classes, parentenv, handlers)
   4. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   5. value[[3L]](cond)
  
  == testthat results  ===========================================================
  [ OK: 76 | SKIPPED: 2 | WARNINGS: 2 | FAILED: 1 ]
  1. Error: (unknown) (@test.runtest.R#3) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'extending.Rmd' using rmarkdown
--- finished re-building 'extending.Rmd'

--- re-building 'overview.Rmd' using rmarkdown
Quitting from lines 94-119 (overview.Rmd) 
Error: processing vignette 'overview.Rmd' failed with diagnostics:
package or namespace load failed for 'caret' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'overview.Rmd'

SUMMARY: processing the following file failed:
  'overview.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/CRUF.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/csa.Rcheck/00install.out' for details.
installed size is  7.8Mb
  sub-directories of 1Mb or more:
    shp   7.8Mb
Running examples in 'csodata-Ex.R' failed
The error most likely occurred in:

> ### Name: cso_get_toc
> ### Title: Returns a data frame with all valid CSO Statbank tables listed
> ###   sequentially by id number, e.g. A0101, A0102, A0103, etc.
> ### Aliases: cso_get_toc
> 
> ### ** Examples
> 
> head(cso_get_toc())
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: head ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'quick_start_guide.Rmd' using rmarkdown
Quitting from lines 33-35 (quick_start_guide.Rmd) 
Error: processing vignette 'quick_start_guide.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'quick_start_guide.Rmd'

SUMMARY: processing the following file failed:
  'quick_start_guide.Rmd'

Error: Vignette re-building failed.
Execution halted
installed size is 11.0Mb
  sub-directories of 1Mb or more:
    data  10.9Mb
pielou: no visible global function definition for 'runif'
Undefined global functions or variables:
  runif
Consider adding
  importFrom("stats", "runif")
to your NAMESPACE file.
Package in Depends field not imported from: 'compiler'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
csSAM: no visible binding for global variable 'quantile'
csSAM: no visible global function definition for 'median'
csfit: no visible global function definition for 'lsfit'
csfit: no visible global function definition for 'ls.diag'
plotCsSAM: no visible global function definition for 'pdf'
plotCsSAM: no visible global function definition for 'par'
plotCsSAM: no visible global function definition for 'title'
plotCsSAM: no visible global function definition for 'dev.off'
runSAM: no visible binding for global variable 'median'
runSAM: no visible global function definition for 'quantile'
Undefined global functions or variables:
  dev.off ls.diag lsfit median par pdf quantile title
Consider adding
  importFrom("grDevices", "dev.off", "pdf")
  importFrom("graphics", "par", "title")
  importFrom("stats", "ls.diag", "lsfit", "median", "quantile")
to your NAMESPACE file.
Malformed Title field: should not end in a period.
cstar: no visible global function definition for 'vcov'
cstar : utility: no visible global function definition for 'dt'
cstar : maximand: no visible global function definition for 'integrate'
cstar: no visible global function definition for 'uniroot'
cstari : utility: no visible global function definition for 'dt'
cstari : maximand: no visible global function definition for
  'integrate'
cstari: no visible global function definition for 'uniroot'
cstarme : utility: no visible global function definition for 'density'
cstarme : maximand: no visible global function definition for
  'integrate'
cstarme : maximand: no visible global function definition for 'sd'
cstarme: no visible global function definition for 'uniroot'
Undefined global functions or variables:
  density dt integrate sd uniroot vcov
Consider adding
  importFrom("stats", "density", "dt", "integrate", "sd", "uniroot",
             "vcov")
to your NAMESPACE file.
Running examples in 'ctDNAtools-Ex.R' failed
The error most likely occurred in:

> ### Name: get_mutations_read_counts
> ### Title: Counts ref and alt reads for a set of mutations
> ### Aliases: get_mutations_read_counts
> 
> ### ** Examples
> 
> data("mutations", package = "ctDNAtools")
> bamT1 <- system.file("extdata", "T1.bam", package = "ctDNAtools")
> get_mutations_read_counts(mutations = mutations[1:3, ], bam = bamT1)
Error: `pmap_dfr()` requires dplyr
Backtrace:
    x
 1. \-ctDNAtools::get_mutations_read_counts(...)
 2.   \-purrr::pmap_dfr(...)
Execution halted
Running 'testthat.R' [14s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(ctDNAtools)
  > 
  > test_check("ctDNAtools")
  -- 1. Error: (unknown) (@test-ctDNAtest.R#13)  ---------------------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. ctDNAtools::test_ctDNA(...)
    2. ctDNAtools::get_background_rate(...)
    3. Rsamtools::pileup(bam, scanBamParam = sbp, pileupParam = pileup_param)
   10. tidyr::pivot_wider(...)
   11. base::getExportedValue(pkg, name)
   12. base::asNamespace(ns)
   13. base::getNamespace(ns)
   14. base::loadNamespace(name)
   17. base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
   18. base::library.dynam(lib, package, package.lib)
  
  -- 2. Error: (unknown) (@test-fragment_size.R#13)  -----------------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. ctDNAtools::get_fragment_size(bamN3)
    2. base::as.data.frame(reads)
    9. dplyr::mutate(...)
   10. base::getExportedValue(pkg, name)
   11. base::asNamespace(ns)
   12. base::getNamespace(ns)
   13. base::loadNamespace(name)
   14. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 0 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 2 ]
  1. Error: (unknown) (@test-ctDNAtest.R#13) 
  2. Error: (unknown) (@test-fragment_size.R#13) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'ctDNAtools.Rmd' using rmarkdown
Quitting from lines 42-69 (ctDNAtools.Rmd) 
Error: processing vignette 'ctDNAtools.Rmd' failed with diagnostics:
package or namespace load failed for 'tidyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'ctDNAtools.Rmd'

SUMMARY: processing the following file failed:
  'ctDNAtools.Rmd'

Error: Vignette re-building failed.
Execution halted
Error(s) in re-building vignettes:
--- re-building 'vignette.Rmd' using rmarkdown
Quitting from lines 36-71 (vignette.Rmd) 
Error: processing vignette 'vignette.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'vignette.Rmd'

SUMMARY: processing the following file failed:
  'vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
installed size is  8.5Mb
  sub-directories of 1Mb or more:
    R      1.1Mb
    data   1.4Mb
    doc    1.0Mb
    libs   4.8Mb
GNU make is a SystemRequirements.
Found the following significant warnings:
  ./src/common/Random.c:105:5: warning: 'memcpy' pointer overflow between offset 0 and size [4294967292, 2147483647] [-Warray-bounds]
  ./src/common/Random.c:105:5: warning: 'memcpy' pointer overflow between offset 0 and size [-4, 9223372036854775807] [-Warray-bounds]
See 'd:/Rcompile/CRANpkg/local/4.0/cubature.Rcheck/00install.out' for details.
installed size is  6.9Mb
  sub-directories of 1Mb or more:
    doc    1.3Mb
    libs   5.5Mb
GNU make is a SystemRequirements.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/cubelyr.Rcheck/00install.out' for details.
Error(s) in re-building vignettes:
--- re-building 'cubist.Rmd' using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Quitting from lines 12-20 (cubist.Rmd) 
Error: processing vignette 'cubist.Rmd' failed with diagnostics:
package or namespace load failed for 'caret' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'cubist.Rmd'

SUMMARY: processing the following file failed:
  'cubist.Rmd'

Error: Vignette re-building failed.
Execution halted
Found the following hidden files and directories:
  .gitignore
These were most likely included in error. See section 'Package
structure' in the 'Writing R Extensions' manual.
Malformed Title field: should not end in a period.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/curl.Rcheck/00install.out' for details.
cci.nostrat: no visible global function definition for 'quantile'
cci.nostrat: no visible global function definition for 'axis'
cci.nostrat: no visible global function definition for 'lines'
cci.nostrat: no visible global function definition for 'legend'
cci.strat: no visible global function definition for 'axis'
cci.strat: no visible global function definition for 'lines'
cci.strat: no visible global function definition for 'legend'
clfs.nostrat: no visible global function definition for 'quantile'
clfs.nostrat: no visible global function definition for 'axis'
clfs.nostrat: no visible global function definition for 'lines'
clfs.nostrat: no visible global function definition for 'legend'
clfs.strat: no visible global function definition for 'axis'
clfs.strat: no visible global function definition for 'lines'
clfs.strat: no visible global function definition for 'legend'
pvals.2cat: no visible global function definition for 'pchisq'
pvals.cat: no visible global function definition for 'pchisq'
Undefined global functions or variables:
  axis legend lines pchisq quantile
Consider adding
  importFrom("graphics", "axis", "legend", "lines")
  importFrom("stats", "pchisq", "quantile")
to your NAMESPACE file.
Error(s) in re-building vignettes:
--- re-building 'Roadmap.Rmd' using rmarkdown
--- finished re-building 'Roadmap.Rmd'

--- re-building 'customlayout-cookbook.Rmd' using rmarkdown
Loading required package: MASS
Quitting from lines 30-86 (customlayout-cookbook.Rmd) 
Error: processing vignette 'customlayout-cookbook.Rmd' failed with diagnostics:
package or namespace load failed for 'klaR' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'customlayout-cookbook.Rmd'

--- re-building 'layouts-for-officer-power-point-document.Rmd' using rmarkdown
Quitting from lines 139-160 (layouts-for-officer-power-point-document.Rmd) 
Error: processing vignette 'layouts-for-officer-power-point-document.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'layouts-for-officer-power-point-document.Rmd'

SUMMARY: processing the following files failed:
  'customlayout-cookbook.Rmd'
  'layouts-for-officer-power-point-document.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/customsteps.Rcheck/00install.out' for details.
Cut: no visible global function definition for 'cor'
MissSimulation: no visible global function definition for 'rbinom'
cutoff: no visible global function definition for 'cor'
Undefined global functions or variables:
  cor rbinom
Consider adding
  importFrom("stats", "cor", "rbinom")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/cutpointr.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
delta.glm: no visible global function definition for 'glm'
delta.glm: no visible global function definition for 'residuals'
delta.glm: no visible global function definition for 'fitted'
delta.glm: no visible global function definition for 'predict.glm'
two.stage.model.outputs: no visible global function definition for 'sd'
Undefined global functions or variables:
  fitted glm predict.glm residuals sd
Consider adding
  importFrom("stats", "fitted", "glm", "predict.glm", "residuals", "sd")
to your NAMESPACE file.
ci.cvAUC: no visible global function definition for 'qnorm'
ci.pooled.cvAUC: no visible global function definition for 'qnorm'
Undefined global functions or variables:
  qnorm
Consider adding
  importFrom("stats", "qnorm")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
calfun: no visible global function definition for 'optim'
calfun: no visible global function definition for 'cov'
calfun: no visible global function definition for 'var'
Undefined global functions or variables:
  cov optim var
Consider adding
  importFrom("stats", "cov", "optim", "var")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/cvcqv.Rcheck/00install.out' for details.
Running examples in 'cvcrand-Ex.R' failed
The error most likely occurred in:

> ### Name: cvrall
> ### Title: Covariate-constrained randomization for cluster randomized
> ###   trials
> ### Aliases: cvrall
> ### Keywords: cluster-randomized-trails covariate-constrained-randomization
> 
> ### ** Examples
> 
> 
> 
> # cvrall examples
> 
> Design_result <- cvrall(clustername = Dickinson_design$county,
+                          balancemetric = "l2",
+                          x = data.frame(Dickinson_design[ , c("location", "inciis",
+                               "uptodateonimmunizations", "hispanic", "incomecat")]),
+                          ntotal_cluster = 16,
+                          ntrt_cluster = 8,
+                          categorical = c("location", "incomecat"),
+                          ###### Option to save the constrained space ######
+                          # savedata = "dickinson_constrained.csv",
+                          bhist = TRUE,
+                          cutoff = 0.1,
+                          seed = 12345, 
+                          check_validity = TRUE)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: cvrall ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'cvcrand.Rmd' using rmarkdown
Quitting from lines 72-87 (cvcrand.Rmd) 
Error: processing vignette 'cvcrand.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'cvcrand.Rmd'

SUMMARY: processing the following file failed:
  'cvcrand.Rmd'

Error: Vignette re-building failed.
Execution halted
Error(s) in re-building vignettes:
--- re-building 'how_to_test_CVs.Rmd' using rmarkdown
Quitting from lines 171-182 (how_to_test_CVs.Rmd) 
Error: processing vignette 'how_to_test_CVs.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'how_to_test_CVs.Rmd'

SUMMARY: processing the following file failed:
  'how_to_test_CVs.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'cvGEE-Ex.R' failed
The error most likely occurred in:

> ### Name: cv_gee
> ### Title: Proper Scoring Rules for Generalized Estimating Equations
> ### Aliases: cv_gee
> 
> ### ** Examples
> 
> library("geepack")
Error: package or namespace load failed for 'geepack' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Error(s) in re-building vignettes:
--- re-building 'Scoring_Rules_GEE.Rmd' using rmarkdown
Quitting from lines 15-23 (Scoring_Rules_GEE.Rmd) 
Error: processing vignette 'Scoring_Rules_GEE.Rmd' failed with diagnostics:
package or namespace load failed for 'geepack' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'Scoring_Rules_GEE.Rmd'

SUMMARY: processing the following file failed:
  'Scoring_Rules_GEE.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/CVglasso.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/cvms.Rcheck/00install.out' for details.
Package in Depends field not imported from: 'methods'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
func.constructRegressionFormula: no visible global function definition
  for 'as.formula'
func.crossValidationAnalysis: no visible global function definition for
  'glm'
func.crossValidationAnalysis: no visible global function definition for
  'predict'
func.crossValidationAnalysis: no visible global function definition for
  'write.table'
func.externalValidationAnalysis: no visible global function definition
  for 'predict'
func.externalValidationAnalysis: no visible global function definition
  for 'write.table'
func.linearRegressionAnalysis: no visible global function definition
  for 'glm'
func.linearRegressionAnalysis: no visible global function definition
  for 'predict'
func.linearRegressionAnalysis: no visible global function definition
  for 'write.table'
func.sortDataColumns: no visible global function definition for
  'write.table'
mainfunc.q2: no visible global function definition for 'write.table'
mainfunc.q2: no visible global function definition for 'new'
mainfunc.stats: no visible global function definition for 'write.table'
mainfunc.stats: no visible global function definition for 'new'
Undefined global functions or variables:
  as.formula glm new predict write.table
Consider adding
  importFrom("methods", "new")
  importFrom("stats", "as.formula", "glm", "predict")
  importFrom("utils", "write.table")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
cvimpute.by.wavelet: no visible global function definition for 'sd'
cvimpute.by.wavelet: no visible global function definition for 'mad'
cvimpute.image.by.wavelet: no visible global function definition for
  'sd'
cvimpute.image.by.wavelet: no visible global function definition for
  'mad'
cvwavelet.image.after.impute: no visible global function definition for
  'sd'
cvwavelet.image.after.impute: no visible global function definition for
  'mad'
Undefined global functions or variables:
  mad sd
Consider adding
  importFrom("stats", "mad", "sd")
to your NAMESPACE file.
Packages listed in more than one of Depends, Imports, Suggests, Enhances:
  'lattice' 'robustbase'
A package should be listed in only one of these fields.
random.CV: no visible global function definition for 'var'
regular.CV: no visible global function definition for 'var'
Undefined global functions or variables:
  var
Consider adding
  importFrom("stats", "var")
to your NAMESPACE file.
create_clustering_problem: no visible global function definition for
  'rnorm'
Undefined global functions or variables:
  rnorm
Consider adding
  importFrom("stats", "rnorm")
to your NAMESPACE file.
Found the following Makefile(s) without a final LF:
  src/Makevars
Some 'make' programs ignore lines not ending in LF.
Packages suggested but not available for checking:
  'gurobi', 'Rcplex', 'rcbc'
installed size is  7.7Mb
  sub-directories of 1Mb or more:
    R      2.6Mb
    doc    1.2Mb
    help   1.0Mb
    libs   2.4Mb
Error(s) in re-building vignettes:
--- re-building 'europarl.Rmd' using rmarkdown
--- finished re-building 'europarl.Rmd'

--- re-building 'sentences.Rmd' using rmarkdown
--- finished re-building 'sentences.Rmd'

--- re-building 'vignette.Rmd' using rmarkdown
... adding corpus positions to table 'metadata'
Creating new corpus 'UNGA'
... encoding p-attribute 'word'
... writing tokenstream to disk (directly from R, equivalent to cwb-encode)
... creating indices (in memory)
... writing file: word.corpus
... writing file: word.lexicon
... writing file: word.lexicon.idx
... creating data for new registry file
... writing registry file
Quitting from lines 187-190 (vignette.Rmd) 
Error: processing vignette 'vignette.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'vignette.Rmd'

SUMMARY: processing the following file failed:
  'vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
.mixgauss_init: no visible global function definition for 'cov'
.mixgauss_init: no visible global function definition for 'var'
Undefined global functions or variables:
  cov var
Consider adding
  importFrom("stats", "cov", "var")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
cxxfun.from.dll: no visible global function definition for 'new'
cxxfun.from.dso.bin: no visible global function definition for 'new'
cxxfunctionplus: no visible global function definition for 'getPlugin'
cxxfunctionplus: no visible global function definition for
  'cxxfunction'
cxxfunctionplus: no visible global function definition for 'new'
show,cxxdso: no visible global function definition for 'object.size'
Undefined global functions or variables:
  cxxfunction getPlugin new object.size
Consider adding
  importFrom("methods", "new")
  importFrom("utils", "object.size")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Running examples in 'cyanoFilter-Ex.R' failed
The error most likely occurred in:

> ### Name: cellmargin
> ### Title: Removes or assign indicators to margin events.
> ### Aliases: cellmargin
> 
> ### ** Examples
> 
> flowfile_path <- system.file("extdata", "B4_18_1.fcs", package = "cyanoFilter",
+               mustWork = TRUE)
> flowfile <- flowCore::read.FCS(flowfile_path, alter.names = TRUE,
+                                transformation = FALSE, emptyValue = FALSE,
+                                dataset = 1) #FCS file contains only one data object
> flowfile_nona <- cyanoFilter::nona(x = flowfile)
> flowfile_noneg <- cyanoFilter::noneg(x = flowfile_nona)
> flowfile_logtrans <- lnTrans(x = flowfile_noneg, c('SSC.W', 'TIME'))
> cellmargin(flow.frame = flowfile_logtrans, Channel = 'SSC.W',
+            type = 'estimate', y_toplot = "FSC.HLin")
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: cellmargin ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/cyclomort.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/Cyclops.Rcheck/00install.out' for details.
Package in Depends field not imported from: 'fda'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
check.for.sequence.endpoint.breaks: no visible global function
  definition for 'na.omit'
get.breaks.vector: no visible global function definition for 'na.omit'
get.cycle.breaks: no visible global function definition for 'na.omit'
get.cycle.counts: no visible global function definition for 'na.omit'
get.cycle.matrix: no visible global function definition for 'na.omit'
get.cycle.minimums: no visible global function definition for 'na.omit'
get.peaks: no visible global function definition for 'embed'
get.trans: no visible global function definition for
  'create.bspline.basis'
get.trans: no visible global function definition for 'smooth.basis'
get.trans: no visible global function definition for 'deriv.fd'
get.trans: no visible global function definition for 'eval.fd'
get.transition.locations: no visible global function definition for
  'na.omit'
get.transition.locations.FDiff: no visible global function definition
  for 'na.omit'
get.window: no visible global function definition for 'sd'
Undefined global functions or variables:
  create.bspline.basis deriv.fd embed eval.fd na.omit sd smooth.basis
Consider adding
  importFrom("stats", "embed", "na.omit", "sd")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
cytoDiv: no visible global function definition for 'colorRampPalette'
cytoDiv: no visible global function definition for 'persp'
Undefined global functions or variables:
  colorRampPalette persp
Consider adding
  importFrom("grDevices", "colorRampPalette")
  importFrom("graphics", "persp")
to your NAMESPACE file.
Error(s) in re-building vignettes:
--- re-building 'cytofan_flow_cytometry.Rmd' using rmarkdown
Quitting from lines 53-57 (cytofan_flow_cytometry.Rmd) 
Error: processing vignette 'cytofan_flow_cytometry.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'cytofan_flow_cytometry.Rmd'

SUMMARY: processing the following file failed:
  'cytofan_flow_cytometry.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'cytominer-Ex.R' failed
The error most likely occurred in:

> ### Name: aggregate
> ### Title: Aggregate data based on given grouping.
> ### Aliases: aggregate
> 
> ### ** Examples
> 
> population <- tibble::tibble(
+   Metadata_group = c(
+     "control", "control", "control", "control",
+     "experiment", "experiment", "experiment",
+     "experiment"
+   ),
+   Metadata_batch = c("a", "a", "b", "b", "a", "a", "b", "b"),
+   AreaShape_Area = c(10, 12, 15, 16, 8, 8, 7, 7)
+ )
> variables <- c("AreaShape_Area")
> strata <- c("Metadata_group", "Metadata_batch")
> aggregate(population, variables, strata, operation = "mean")
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: aggregate ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'cytominer-pipeline.Rmd' using rmarkdown
Quitting from lines 52-59 (cytominer-pipeline.Rmd) 
Error: processing vignette 'cytominer-pipeline.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'cytominer-pipeline.Rmd'

SUMMARY: processing the following file failed:
  'cytominer-pipeline.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'd3r-Ex.R' failed
The error most likely occurred in:

> ### Name: d3_nest
> ### Title: Convert a 'data.frame' to a 'd3.js' Hierarchy
> ### Aliases: d3_nest
> 
> ### ** Examples
> 
> # convert Titanic to a nested d3 hierarchy
> 
> # devtools::install_github("timelyportfolio/d3r")
> library(d3r)
> library(dplyr)
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/d3Tree.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dabestr.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/DAC.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
Package in Depends field not imported from: 's20x'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
allCombs: no visible global function definition for 'combn'
brute.search: no visible global function definition for 'na.omit'
dag.draw: no visible global function definition for 'text'
dag.init: no visible global function definition for
  'installed.packages'
dag.legend: no visible global function definition for 'text'
dag.letter: no visible global function definition for 'text'
dag.move: no visible global function definition for 'identify'
dag.move: no visible global function definition for 'locator'
dag.sim: no visible global function definition for 'rnorm'
dag.sim: no visible global function definition for 'rbinom'
dag.sim : <anonymous>: no visible global function definition for
  'rbinom'
garrows: no visible global function definition for 'arrows'
smoothArc: no visible global function definition for 'points'
summary_dagRdag: no visible global function definition for 'na.omit'
viv: no visible global function definition for 'na.omit'
write.paths: no visible global function definition for 'text'
Undefined global functions or variables:
  arrows combn identify installed.packages locator na.omit points
  rbinom rnorm text
Consider adding
  importFrom("graphics", "arrows", "identify", "locator", "points",
             "text")
  importFrom("stats", "na.omit", "rbinom", "rnorm")
  importFrom("utils", "combn", "installed.packages")
to your NAMESPACE file.
Package which this enhances but not available for checking: 'doMC'
Running examples in 'DALEXtra-Ex.R' failed
The error most likely occurred in:

> ### Name: explain_mlr
> ### Title: Create explainer from your mlr model
> ### Aliases: explain_mlr
> 
> ### ** Examples
> 
> library("DALEXtra")
> titanic_test <- read.csv(system.file("extdata", "titanic_test.csv", package = "DALEXtra"))
> titanic_train <- read.csv(system.file("extdata", "titanic_train.csv", package = "DALEXtra"))
> library("mlr")
Loading required package: ParamHelpers
Error: package or namespace load failed for 'mlr' in library.dynam(lib, package, package.lib):
 DLL 'mlr' not found: maybe not installed for this architecture?
Execution halted
Running examples in 'dalmatian-Ex.R' failed
The error most likely occurred in:

> ### Name: caterpillar
> ### Title: Caterpillar (Generic)
> ### Aliases: caterpillar
> 
> ### ** Examples
> 
> 
> ## Load output from previously run model
> load(system.file("Pied_Flycatchers_1","pfresults.RData",package="dalmatian"))
> 
> ## Generate caterpillar
> pfcaterpillar <- caterpillar(pfresults,plot = FALSE)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: caterpillar ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'pied-flycatchers-1.Rmd' using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Quitting from lines 133-142 (pied-flycatchers-1.Rmd) 
Error: processing vignette 'pied-flycatchers-1.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'pied-flycatchers-1.Rmd'

--- re-building 'pied-flycatchers-2.Rmd' using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Quitting from lines 123-138 (pied-flycatchers-2.Rmd) 
Error: processing vignette 'pied-flycatchers-2.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'pied-flycatchers-2.Rmd'

--- re-building 'weights-1-simulate.Rmd' using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Quitting from lines 36-71 (weights-1-simulate.Rmd) 
Error: processing vignette 'weights-1-simulate.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'weights-1-simulate.Rmd'

SUMMARY: processing the following files failed:
  'pied-flycatchers-1.Rmd' 'pied-flycatchers-2.Rmd'
  'weights-1-simulate.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/DamiaNN.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dams.Rcheck/00install.out' for details.
Running examples in 'dann-Ex.R' failed
The error most likely occurred in:

> ### Name: dann
> ### Title: Discriminant Adaptive Nearest Neighbor Classification
> ### Aliases: dann
> 
> ### ** Examples
> 
> library(dann)
> library(mlbench)
> library(magrittr)
> library(dplyr)
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Running 'testthat.R' [2s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(dann)
  > 
  > test_check("dann")
  -- 1. Error: (unknown) (@test_dann.R#5)  ---------------------------------------
  package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::library(dplyr)
   2. base::tryCatch(...)
   3. base:::tryCatchList(expr, classes, parentenv, handlers)
   4. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   5. value[[3L]](cond)
  
  -- 2. Error: (unknown) (@test_graph_eigenvalues.R#5)  --------------------------
  package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::library(dplyr)
   2. base::tryCatch(...)
   3. base:::tryCatchList(expr, classes, parentenv, handlers)
   4. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   5. value[[3L]](cond)
  
  -- 3. Error: (unknown) (@test_sub_dann.R#5)  -----------------------------------
  package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::library(dplyr)
   2. base::tryCatch(...)
   3. base:::tryCatchList(expr, classes, parentenv, handlers)
   4. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   5. value[[3L]](cond)
  
  == testthat results  ===========================================================
  [ OK: 0 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 3 ]
  1. Error: (unknown) (@test_dann.R#5) 
  2. Error: (unknown) (@test_graph_eigenvalues.R#5) 
  3. Error: (unknown) (@test_sub_dann.R#5) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'dann.Rmd' using rmarkdown
Quitting from lines 28-75 (dann.Rmd) 
Error: processing vignette 'dann.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'dann.Rmd'

--- re-building 'sub_dann.Rmd' using rmarkdown
Quitting from lines 28-87 (sub_dann.Rmd) 
Error: processing vignette 'sub_dann.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'sub_dann.Rmd'

SUMMARY: processing the following files failed:
  'dann.Rmd' 'sub_dann.Rmd'

Error: Vignette re-building failed.
Execution halted
Error(s) in re-building vignettes:
--- re-building 'Introduction_to_danstat.Rmd' using rmarkdown
Quitting from lines 24-29 (Introduction_to_danstat.Rmd) 
Error: processing vignette 'Introduction_to_danstat.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'Introduction_to_danstat.Rmd'

SUMMARY: processing the following file failed:
  'Introduction_to_danstat.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/daqapo.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dartR.Rcheck/00install.out' for details.
drawAimSpot: no visible global function definition for 'points'
drawBoard: no visible global function definition for 'par'
drawBoard: no visible global function definition for 'points'
drawBoard: no visible global function definition for 'text'
drawHeatmap: no visible global function definition for 'heat.colors'
drawHeatmap: no visible global function definition for 'par'
drawHeatmap: no visible global function definition for 'image'
drawHeatmap: no visible global function definition for 'rect'
generalExpScores: no visible global function definition for 'fft'
simpleExpScores: no visible global function definition for 'mvfft'
simpleExpScores: no visible global function definition for 'fft'
Undefined global functions or variables:
  fft heat.colors image mvfft par points rect text
Consider adding
  importFrom("grDevices", "heat.colors")
  importFrom("graphics", "image", "par", "points", "rect", "text")
  importFrom("stats", "fft", "mvfft")
to your NAMESPACE file.
dashboard_open: no visible global function definition for 'write.csv'
dashboard_open: no visible global function definition for
  'capture.output'
dctable: no visible global function definition for 'capture.output'
Undefined global functions or variables:
  capture.output write.csv
Consider adding
  importFrom("utils", "capture.output", "write.csv")
to your NAMESPACE file.
installed size is 10.9Mb
  sub-directories of 1Mb or more:
    deps  10.5Mb
installed size is  8.7Mb
  sub-directories of 1Mb or more:
    lib   8.4Mb
installed size is  6.6Mb
  sub-directories of 1Mb or more:
    deps   6.5Mb
installed size is  7.6Mb
  sub-directories of 1Mb or more:
    java   7.5Mb
installed size is  6.1Mb
  sub-directories of 1Mb or more:
    doc    3.4Mb
    libs   2.4Mb
datadict.profile: no visible global function definition for
  'txtProgressBar'
datadict.profile: no visible global function definition for
  'setTxtProgressBar'
datadict_profile: no visible global function definition for
  'txtProgressBar'
datadict_profile: no visible global function definition for
  'setTxtProgressBar'
heatmap.quality: no visible global function definition for
  'colorRampPalette'
heatmap.quality: no visible global function definition for 'heatmap'
heatmap_quality: no visible global function definition for
  'colorRampPalette'
heatmap_quality: no visible global function definition for 'heatmap'
is.oneOf: no visible global function definition for 'read.csv'
is_one_of: no visible global function definition for 'read.csv'
pkg.version: no visible global function definition for 'citation'
pkg_version: no visible global function definition for 'citation'
ruleCoverage: no visible global function definition for 'dotchart'
ruleCoverage: no visible global function definition for 'abline'
rule_coverage: no visible global function definition for 'dotchart'
rule_coverage: no visible global function definition for 'abline'
shortSummary: no visible global function definition for 'sd'
short_summary: no visible global function definition for 'sd'
Undefined global functions or variables:
  abline citation colorRampPalette dotchart heatmap read.csv sd
  setTxtProgressBar txtProgressBar
Consider adding
  importFrom("grDevices", "colorRampPalette")
  importFrom("graphics", "abline", "dotchart")
  importFrom("stats", "heatmap", "sd")
  importFrom("utils", "citation", "read.csv", "setTxtProgressBar",
             "txtProgressBar")
to your NAMESPACE file.
Package has no Sweave vignette sources and no VignetteBuilder field.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/DataCombine.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dataCompareR.Rcheck/00install.out' for details.
Package vignette with placeholder title 'Vignette Title':
  'datadigest.Rmd'
Running 'testthat.R' [3s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(datadogr)
  > 
  > test_check("datadogr")
  -- 1. Error: extract_scope works (@test-extract-scope.R#14)  -------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. datadogr:::extract_scope(d)
    2. tidyr::extract
    3. base::getExportedValue(pkg, name)
    4. base::asNamespace(ns)
    5. base::getNamespace(ns)
    6. base::loadNamespace(name)
    9. base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
   10. base::library.dynam(lib, package, package.lib)
  
  -- 2. Error: k9_get_metrics works (@test-metrics.R#15)  ------------------------
  `map_df()` requires dplyr
  Backtrace:
   1. datadogr:::flatten_get_metrics(result)
   2. purrr::map_df(result$series, flatten_metric_one)
  
  == testthat results  ===========================================================
  [ OK: 22 | SKIPPED: 1 | WARNINGS: 0 | FAILED: 2 ]
  1. Error: extract_scope works (@test-extract-scope.R#14) 
  2. Error: k9_get_metrics works (@test-metrics.R#15) 
  
  Error: testthat unit tests failed
  Execution halted
installed size is  5.1Mb
  sub-directories of 1Mb or more:
    doc   4.8Mb
Running 'testthat.R' [4s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(datafsm)
  > 
  > test_check("datafsm")
  -- 1. Error: evolve_model() returns correct type of object (@test_mainfunc.R#7) 
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. datafsm::evolve_model(cdata, cv = FALSE)
    2. caret::nearZeroVar
    3. base::getExportedValue(pkg, name)
    4. base::asNamespace(ns)
    5. base::getNamespace(ns)
    6. base::loadNamespace(name)
    8. base::loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]])
   11. base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
   12. base::library.dynam(lib, package, package.lib)
  
  -- 2. Error: evolve_model() returns warnings and errors (@test_mainfunc.R#14)  -
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. testthat::expect_warning(evolve_model(cdata, cv = FALSE), "did not supply a data.frame")
    6. datafsm::evolve_model(cdata, cv = FALSE)
    7. caret::nearZeroVar
    8. base::getExportedValue(pkg, name)
    9. base::asNamespace(ns)
   10. base::getNamespace(ns)
   11. base::loadNamespace(name)
   13. base::loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]])
   16. base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
   17. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 3 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 2 ]
  1. Error: evolve_model() returns correct type of object (@test_mainfunc.R#7) 
  2. Error: evolve_model() returns warnings and errors (@test_mainfunc.R#14) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'datafsm_introduction.Rmd' using rmarkdown
Quitting from lines 168-170 (datafsm_introduction.Rmd) 
Error: processing vignette 'datafsm_introduction.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'datafsm_introduction.Rmd'

--- re-building 'FRD_vignette.Rmd' using rmarkdown_notangle
--- finished re-building 'FRD_vignette.Rmd'

SUMMARY: processing the following file failed:
  'datafsm_introduction.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/datagovsgR.Rcheck/00install.out' for details.
Package in Depends field not imported from: 'DBI'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
.onLoad : <anonymous>: no visible global function definition for
  'read.table'
.onLoad : <anonymous>: no visible global function definition for
  'dbConnect'
.onLoad : <anonymous>: no visible global function definition for
  'dbListTables'
.onLoad : <anonymous>: no visible global function definition for
  'dbExistsTable'
.onLoad : <anonymous>: no visible global function definition for
  'dbReadTable'
.onLoad : <anonymous>: no visible global function definition for
  'dbWriteTable'
.onLoad : <anonymous>: no visible global function definition for
  'dbDisconnect'
.onLoad : <anonymous>: no visible global function definition for
  'dbRemoveTable'
Undefined global functions or variables:
  dbConnect dbDisconnect dbExistsTable dbListTables dbReadTable
  dbRemoveTable dbWriteTable read.table
Consider adding
  importFrom("utils", "read.table")
to your NAMESPACE file.
Error(s) in re-building vignettes:
--- re-building 'get_started.Rmd' using rmarkdown
Quitting from lines 50-72 (get_started.Rmd) 
Error: processing vignette 'get_started.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'get_started.Rmd'

SUMMARY: processing the following file failed:
  'get_started.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'dataMeta-Ex.R' failed
The error most likely occurred in:

> ### Name: build_dict
> ### Title: Build a data dictionary for a dataset.
> ### Aliases: build_dict
> 
> ### ** Examples
> 
> # example original data set for which a dictionary will be made
> data("esoph")
> my.data <- esoph
> 
> # Linker: Add description for each variable names and variable type
> variable_description <- c("age group in years", "alcohol consumption in gm/day", 
+ "tobacco consumption in gm/day", "number of cases (showing a range)", 
+ "number of controls (showing range)")
> 
> variable_type <- c(0, 0, 0, 0, 0)
> linker <- build_linker(my.data = my.data, variable_description = variable_description, 
+ variable_type = variable_type)
> linker
   var_name                           var_desc var_type
1     agegp                 age group in years        0
2     alcgp      alcohol consumption in gm/day        0
3     tobgp      tobacco consumption in gm/day        0
4    ncases  number of cases (showing a range)        0
5 ncontrols number of controls (showing range)        0
> 
> # Data dictionary
> # For this data set, no further option description is needed.
> dictionary <- build_dict(my.data = my.data, linker = linker, option_description = NULL, 
+ prompt_varopts = FALSE)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: build_dict ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'dataMeta_Vignette.Rmd' using rmarkdown
Quitting from lines 98-100 (dataMeta_Vignette.Rmd) 
Error: processing vignette 'dataMeta_Vignette.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'dataMeta_Vignette.Rmd'

SUMMARY: processing the following file failed:
  'dataMeta_Vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
Malformed Description field: should contain one or more complete sentences.
checkDataQuality: no visible binding for global variable 'quantile'
checkDataQuality: no visible global function definition for 'write.csv'
Undefined global functions or variables:
  quantile write.csv
Consider adding
  importFrom("stats", "quantile")
  importFrom("utils", "write.csv")
to your NAMESPACE file.
GNU make is a SystemRequirements.
Running examples in 'datastepr-Ex.R' failed
The error most likely occurred in:

> ### Name: dataStepClass
> ### Title: An implementation of a SAS datastep in a class
> ### Aliases: dataStepClass
> ### Keywords: datasets
> 
> ### ** Examples
> 
> step = dataStepClass$new()
> 
> frame = data.frame(x = 1:10)
> 
> stairs = function() {
+   step$begin(environment())
+   step$set(frame)
+   y = x + 1
+   step$output()
+   step$end(stairs)
+ }
> 
> stairs()
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: stairs ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Running 'testthat.R' [3s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(datastepr)
  > 
  > test_check("datastepr")
  -- 1. Error: datastep (@test.R#2)  ---------------------------------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. testthat::expect_equal(...)
    4. datastepr::toDf(list(a = 1, b = 2, data.frame()), data.frame())
    3. base::as.list(.)
    3. base::Filter(is.vector, .)
    3. tibble::as_tibble(.)
   11. dplyr::bind_rows(dataframe, .)
   14. base::getExportedValue(pkg, name)
   15. base::asNamespace(ns)
   16. base::getNamespace(ns)
   17. base::loadNamespace(name)
   18. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 0 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: datastep (@test.R#2) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'datastepping.Rmd' using rmarkdown
Quitting from lines 51-70 (datastepping.Rmd) 
Error: processing vignette 'datastepping.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'datastepping.Rmd'

SUMMARY: processing the following file failed:
  'datastepping.Rmd'

Error: Vignette re-building failed.
Execution halted
installed size is  6.4Mb
  sub-directories of 1Mb or more:
    libs   5.5Mb
Error(s) in re-building vignettes:
--- re-building 'Introduction_to_datasus.Rmd' using rmarkdown
Quitting from lines 17-20 (Introduction_to_datasus.Rmd) 
Error: processing vignette 'Introduction_to_datasus.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'Introduction_to_datasus.Rmd'

SUMMARY: processing the following file failed:
  'Introduction_to_datasus.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'data.tree-Ex.R' failed
The error most likely occurred in:

> ### Name: plot.Node
> ### Title: Plot a graph, or get a graphviz dot representation of the tree
> ### Aliases: plot.Node ToDiagrammeRGraph SetNodeStyle SetEdgeStyle
> ###   SetGraphStyle GetDefaultTooltip
> 
> ### ** Examples
> 
> data(acme)
> SetGraphStyle(acme, rankdir = "TB")
> SetEdgeStyle(acme, arrowhead = "vee", color = "blue", penwidth = 2)
> #per default, Node style attributes will be inherited:
> SetNodeStyle(acme, style = "filled,rounded", shape = "box", fillcolor = "GreenYellow", 
+              fontname = "helvetica", tooltip = GetDefaultTooltip)
> SetNodeStyle(acme$IT, fillcolor = "LightBlue", penwidth = "5px")
> #inheritance can be avoided:
> SetNodeStyle(acme$Accounting, inherit = FALSE, fillcolor = "Thistle", 
+              fontcolor = "Firebrick", tooltip = "This is the accounting department")
> SetEdgeStyle(acme$Research$`New Labs`, 
+              color = "red", 
+              label = "Focus!", 
+              penwidth = 3, 
+              fontcolor = "red")
> #use Do to set style on specific nodes:
> Do(acme$leaves, function(node) SetNodeStyle(node, shape = "egg"))
> plot(acme)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: plot ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
installed size is  5.2Mb
  sub-directories of 1Mb or more:
    doc    1.7Mb
    libs   2.1Mb
Running examples in 'DataVisualizations-Ex.R' failed
The error most likely occurred in:

> ### Name: Classplot
> ### Title: Classplot
> ### Aliases: Classplot
> ### Keywords: Classplot dotplot
> 
> ### ** Examples
> 
> data(Lsun3D)
> Classplot(Lsun3D$Data[,1],Lsun3D$Data[,2],Lsun3D$Cls)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: Classplot ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/datos.Rcheck/00install.out' for details.
Error(s) in re-building vignettes:
--- re-building 'daymetr-vignette.Rmd' using rmarkdown
Quitting from lines 13-29 (daymetr-vignette.Rmd) 
Error: processing vignette 'daymetr-vignette.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'daymetr-vignette.Rmd'

SUMMARY: processing the following file failed:
  'daymetr-vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
Malformed Description field: should contain one or more complete sentences.
dbEmpLikeGOF: no visible global function definition for 'runif'
dbEmpLikeGOF: no visible global function definition for 'var'
dbEmpLikeGOF: no visible global function definition for 'rnorm'
emplikeGOFinternal: no visible global function definition for 'var'
getCutoff: no visible binding for global variable 'unifCut'
getCutoff: no visible binding for global variable 'normCut'
getCutoff: no visible global function definition for 'lm'
getCutoff: no visible binding for global variable 'distEqCut'
getPval: no visible binding for global variable 'unifCut'
getPval: no visible binding for global variable 'normCut'
getPval: no visible global function definition for 'lm'
getPval: no visible binding for global variable 'distEqCut'
helperPval: no visible global function definition for 'lm'
returnCutoff: no visible global function definition for 'quantile'
testfun2: no visible global function definition for 'runif'
testfun2: no visible global function definition for 'rnorm'
Undefined global functions or variables:
  distEqCut lm normCut quantile rnorm runif unifCut var
Consider adding
  importFrom("stats", "lm", "quantile", "rnorm", "runif", "var")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
computePval: no visible global function definition for 'lm'
computeQhat: no visible global function definition for 'pnorm'
dbELnorm: no visible global function definition for 'rnorm'
getCutoffTableThree: no visible global function definition for 'lm'
getCutoffTableTwo: no visible global function definition for 'lm'
getCutoffValue: no visible global function definition for 'lm'
helperGetTstat: no visible global function definition for 'rnorm'
returnCutoffValue: no visible global function definition for 'rnorm'
returnCutoffValue: no visible global function definition for 'quantile'
varianceEstimator: no visible global function definition for 'density'
varianceEstimator: no visible global function definition for 'ecdf'
Undefined global functions or variables:
  density ecdf lm pnorm quantile rnorm
Consider adding
  importFrom("stats", "density", "ecdf", "lm", "pnorm", "quantile",
             "rnorm")
to your NAMESPACE file.
Malformed Title field: should not end in a period.
'library' or 'require' call to 'fdrtool' which was already attached by Depends.
  Please remove these calls from your code.
avelinkdis: no visible global function definition for 'sd'
avelinkdis: no visible global function definition for 'dist'
centdis: no visible global function definition for 'sd'
centdis: no visible global function definition for 'dist'
distable: no visible global function definition for 'write.table'
functionall: no visible global function definition for 'read.table'
randdis: no visible global function definition for 'write.table'
valuep: no visible global function definition for 'write.csv'
Undefined global functions or variables:
  dist read.table sd write.csv write.table
Consider adding
  importFrom("stats", "dist", "sd")
  importFrom("utils", "read.table", "write.csv", "write.table")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dbplot.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dbplyr.Rcheck/00install.out' for details.
Running examples in 'DCD-Ex.R' failed
The error most likely occurred in:

> ### Name: DCD
> ### Title: Differential Community Detection for Paired Biological Networks,
> ###   for e.g. case vs control
> ### Aliases: DCD
> 
> ### ** Examples
> 
> 
> DCD_output <- DCD()
..connectivity..
..matrix multiplication (system BLAS)..
..normalization..
..done.
..connectivity..
..matrix multiplication (system BLAS)..
..normalization..
..done.
> ## Not run: 
> ##D library(igraph)
> ##D g_A <- sample_grg(200, 0.15, torus=FALSE, coords = FALSE)
> ##D g_B <- permute(g_A,c(sample(20),21:200))
> ##D ground_truth <- c(rep(1,20),rep(0,180))
> ##D DCD_output2 <- DCD(g_A = g_A, g_B = g_B, method = "Spectral", mink = 7,
> ##D                    ground_truth = ground_truth, plot_flag = 1, color = "red",
> ##D                    iter = 1, cores = 1 )
> ##D   
> ## End(Not run)
> 
> 
> 
> cleanEx()
Error: connections left open:
	<-CRANwin.fb05.statistik.uni-dortmund.de:11810 (sockconn)
Execution halted
Package suggested but not available for checking: 'doMC'
installed size is  5.4Mb
  sub-directories of 1Mb or more:
    data   4.1Mb
Packages in Depends field not imported from:
  'lattice' 'latticeExtra'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/DCPO.Rcheck/00install.out' for details.
test.LM: no visible global function definition for 'lm'
Undefined global functions or variables:
  lm
Consider adding
  importFrom("stats", "lm")
to your NAMESPACE file.
Running examples in 'ddi-Ex.R' failed
The error most likely occurred in:

> ### Name: ddc
> ### Title: Data Defect Correlation
> ### Aliases: ddc
> 
> ### ** Examples
> 
> library(tibble)
> library(dplyr)
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ddpcr.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/DDPNA.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/DealGPL570.Rcheck/00install.out' for details.
ifft: no visible global function definition for 'fft'
lines.deamer: no visible global function definition for 'lines'
rlaplace: no visible global function definition for 'runif'
Undefined global functions or variables:
  fft lines runif
Consider adding
  importFrom("graphics", "lines")
  importFrom("stats", "fft", "runif")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/deaR.Rcheck/00install.out' for details.
compare.relimp: no visible global function definition for 'qchisq'
compare.relimp: no visible global function definition for 'pchisq'
plot_transition: no visible global function definition for 'dnorm'
plot_transition: no visible global function definition for 'par'
plot_transition: no visible global function definition for 'lines'
plot_transition: no visible global function definition for 'plogis'
plot_transition: no visible global function definition for 'axis'
plot_transition: no visible global function definition for 'mtext'
relative.importance: no visible global function definition for 'glm'
relative.importance: no visible global function definition for 'sd'
relative.importance : tr.pr: no visible global function definition for
  'pnorm'
relative.importance: no visible global function definition for 'vcov'
Undefined global functions or variables:
  axis dnorm glm lines mtext par pchisq plogis pnorm qchisq sd vcov
Consider adding
  importFrom("graphics", "axis", "lines", "mtext", "par")
  importFrom("stats", "dnorm", "glm", "pchisq", "plogis", "pnorm",
             "qchisq", "sd", "vcov")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/DecisionAnalysis.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/decisionSupport.Rcheck/00install.out' for details.
Running examples in 'DeclareDesign-Ex.R' failed
The error most likely occurred in:

> ### Name: declare_design
> ### Title: Declare a design
> ### Aliases: declare_design +.dd print.design summary.design
> 
> ### ** Examples
> 
> 
> my_population <- declare_population(N = 500, noise = rnorm(N))
> 
> my_potential_outcomes <- declare_potential_outcomes(Y ~ Z + noise)
> 
> my_sampling <- declare_sampling(n = 250)
> 
> my_assignment <- declare_assignment(m = 25)
> 
> my_estimand <- declare_estimand(ATE = mean(Y_Z_1 - Y_Z_0))
> 
> my_estimator <- declare_estimator(Y ~ Z, estimand = my_estimand)
> 
> my_mutate <- declare_step(dplyr::mutate, noise_sq = noise^2)
> 
> my_reveal <- declare_reveal()
> 
> design <- my_population + my_potential_outcomes + my_sampling +
+          my_estimand + my_mutate +
+          my_assignment + my_reveal + my_estimator
> 
> design
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: <Anonymous> ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'decoder.Rmd' using rmarkdown
--- finished re-building 'decoder.Rmd'

--- re-building 'sjukhus.Rmd' using rmarkdown
Quitting from lines 54-70 (sjukhus.Rmd) 
Error: processing vignette 'sjukhus.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'sjukhus.Rmd'

SUMMARY: processing the following file failed:
  'sjukhus.Rmd'

Error: Vignette re-building failed.
Execution halted
Package vignette with placeholder title 'Vignette Title':
  'decomposedPSF-vignette.Rmd'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/DecomposeR.Rcheck/00install.out' for details.
DeconCPdf: no visible global function definition for 'bw.nrd0'
DeconCPdf: no visible global function definition for 'bw.nrd'
DeconCPdf: no visible global function definition for 'bw.ucv'
DeconCPdf: no visible global function definition for 'bw.bcv'
DeconCPdf: no visible global function definition for 'bw.SJ'
DeconCPdf: no visible global function definition for 'density'
DeconCPdf: no visible global function definition for 'dnorm'
bw.dboot2 : suppL2: no visible global function definition for 'density'
bw.dboot2 : suppL2: no visible global function definition for 'rnorm'
bw.dboot2 : gaussL2: no visible global function definition for
  'density'
bw.dboot2 : gaussL2: no visible global function definition for 'rnorm'
bw.dmise: no visible global function definition for 'var'
plot.Decon: no visible global function definition for 'plot.default'
plot.Decon: no visible global function definition for 'abline'
Undefined global functions or variables:
  abline bw.SJ bw.bcv bw.nrd bw.nrd0 bw.ucv density dnorm plot.default
  rnorm var
Consider adding
  importFrom("graphics", "abline", "plot.default")
  importFrom("stats", "bw.SJ", "bw.bcv", "bw.nrd", "bw.nrd0", "bw.ucv",
             "density", "dnorm", "rnorm", "var")
to your NAMESPACE file.
Package in Depends field not imported from: 'Deducer'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Depends: includes the non-default packages:
  'Deducer', 'psych', 'GPArotation', 'mvnormtest', 'irr', 'klaR'
Adding so many packages to the search path is excessive and importing
selectively is preferable.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/DeducerPlugInScaling.Rcheck/00install.out' for details.
Depends: includes the non-default packages:
  'JavaGD', 'Deducer', 'sp', 'maptools', 'OpenStreetMap', 'scales',
  'rgdal'
Adding so many packages to the search path is excessive and importing
selectively is preferable.
Package listed in more than one of Depends, Imports, Suggests, Enhances:
  'UScensus2010'
A package should be listed in only one of these fields.
'library' or 'require' call to 'UScensus2010' in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Packages in Depends field not imported from:
  'JavaGD' 'OpenStreetMap' 'maptools' 'rgdal' 'scales' 'sp'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Malformed Description field: should contain one or more complete sentences.
Package in Depends field not imported from: 'Deducer'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Malformed Description field: should contain one or more complete sentences.
.makeQuickWordcloud: no visible global function definition for 'J'
.makeQuickWordcloud: no visible global function definition for 'new'
.makeQuickWordcloud: no visible global function definition for '.jnull'
.makeTextPlot: no visible global function definition for 'J'
.makeTextPlot: no visible global function definition for 'new'
.makeTextPlot: no visible global function definition for '.jnull'
.onLoad: no visible global function definition for '.jpackage'
.onLoad: no visible global function definition for '.jnew'
.onLoad: no visible global function definition for 'J'
make.color.scale: no visible global function definition for 'rgb'
Undefined global functions or variables:
  .jnew .jnull .jpackage J new rgb
Consider adding
  importFrom("grDevices", "rgb")
  importFrom("methods", "new")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/deepdep.Rcheck/00install.out' for details.
binary.state: no visible global function definition for 'runif'
dbn.dnn.train: no visible global function definition for 'runif'
dropout.mask: no visible global function definition for 'runif'
nn.train: no visible global function definition for 'runif'
rbm.train: no visible global function definition for 'runif'
sae.dnn.train: no visible global function definition for 'runif'
show.digit: no visible global function definition for 'gray'
show.digit: no visible global function definition for 'image'
Undefined global functions or variables:
  gray image runif
Consider adding
  importFrom("grDevices", "gray")
  importFrom("graphics", "image")
  importFrom("stats", "runif")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
DEEPR : perm_function: no visible global function definition for 'head'
DEEPR : perm_function: no visible global function definition for 'tail'
simCophy: no visible global function definition for 'rpois'
simCophy: no visible global function definition for 'rmultinom'
Undefined global functions or variables:
  head rmultinom rpois tail
Consider adding
  importFrom("stats", "rmultinom", "rpois")
  importFrom("utils", "head", "tail")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/DeLorean.Rcheck/00install.out' for details.
Running examples in 'deltar-Ex.R' failed
The error most likely occurred in:

> ### Name: dr_pair
> ### Title: Calculate Delta R from a pair of dates
> ### Aliases: dr_pair
> 
> ### ** Examples
> 
> ## Calculation of Delta R for the last pair (pair 9)
> ## from the "adak" data set (see Khasanov et al., 2015
> ## for details). Terrestrial date of this pair is 835 ± 20
> ## (laboratory code NUTA2-20937), marine date 1765 ± 20
> ## (laboratory code NUTA2-20553).
> 
> # Compute and store the results in the new object
> p9 <- dr_pair(dates = c(835, 20, 1765, 20), name = "Adak, pair 9")
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: dr_pair ... loadNamespace -> namespaceImport -> loadNamespace -> library.dynam
Execution halted
bootbagg: no visible global function definition for 'runif'
bootworpl: no visible global function definition for 'runif'
des12: no visible global function definition for 'rnorm'
des12: no visible global function definition for 'runif'
eval.stage.gauss: no visible global function definition for 'var'
plotparti: no visible global function definition for 'lines'
plotpartilev: no visible global function definition for 'polygon'
plotpartilev: no visible global function definition for 'points'
simesi: no visible global function definition for 'runif'
simesi3d: no visible global function definition for 'runif'
simfssk: no visible global function definition for 'rnorm'
simfssk: no visible global function definition for 'runif'
simmix.delt: no visible global function definition for 'rnorm'
simmix.delt: no visible global function definition for 'runif'
simpp: no visible global function definition for 'rnorm'
simpp: no visible global function definition for 'runif'
simutree: no visible global function definition for 'runif'
stage.gaussR: no visible global function definition for 'var'
unidis: no visible global function definition for 'runif'
Undefined global functions or variables:
  lines points polygon rnorm runif var
Consider adding
  importFrom("graphics", "lines", "points", "polygon")
  importFrom("stats", "rnorm", "runif", "var")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/Demerelate.Rcheck/00install.out' for details.
installed size is  5.3Mb
  sub-directories of 1Mb or more:
    doc   4.2Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dendroTools.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
DendSer: no visible global function definition for 'getFromNamespace'
crit2cost : <anonymous>: no visible global function definition for
  'as.dist'
dser.dist: no visible global function definition for 'hclust'
dser.matrix: no visible global function definition for 'dist'
plotAsColor: no visible global function definition for 'image'
plotAsColor: no visible global function definition for 'box'
plotAsColor: no visible global function definition for 'axis'
seriation_method_dist_dser: no visible global function definition for
  'hclust'
seriation_method_dist_dser: no visible global function definition for
  'modifyList'
seriation_method_leafsort: no visible global function definition for
  'modifyList'
Undefined global functions or variables:
  as.dist axis box dist getFromNamespace hclust image modifyList
Consider adding
  importFrom("graphics", "axis", "box", "image")
  importFrom("stats", "as.dist", "dist", "hclust")
  importFrom("utils", "getFromNamespace", "modifyList")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/denovolyzeR.Rcheck/00install.out' for details.
Running 'spelling.R' [0s]
  Running 'testthat.R' [4s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > # This loads the version being checked, not the version
  > # you have installed
  > library(depigner)
  Welcome to depigner: we are here to un-stress you!
  > 
  > 
  > test_check("depigner")
  -- 1. Error: (unknown)  --------------------------------------------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. dplyr::group_by
   2. base::getExportedValue(pkg, name)
   3. base::asNamespace(ns)
   4. base::getNamespace(ns)
   5. base::loadNamespace(name)
   6. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 47 | SKIPPED: 24 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: (unknown) 
  
  Error: testthat unit tests failed
  Execution halted
installed size is  7.2Mb
  sub-directories of 1Mb or more:
    doc       4.9Mb
    extdata   2.1Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/DEploid.Rcheck/00install.out' for details.
Package suggested but not available for checking: 'Rdonlp2'
Package suggested but not available for checking: 'Rdonlp2'
MBD: no visible global function definition for 'par'
MBD: no visible global function definition for 'gray'
MBD: no visible global function definition for 'matplot'
MBD: no visible global function definition for 'polygon'
MBD: no visible global function definition for 'lines'
MBD: no visible global function definition for 'legend'
MBD: no visible global function definition for 'matlines'
R.test: no visible global function definition for 'runif'
R.test: no visible global function definition for 'wilcox.test'
centralPlot: no visible global function definition for 'par'
centralPlot: no visible global function definition for
  'colorRampPalette'
centralPlot: no visible global function definition for 'matplot'
centralPlot: no visible global function definition for 'matlines'
centralPlot: no visible global function definition for 'legend'
scalecurve: no visible global function definition for 'lines'
scalecurve: no visible global function definition for 'legend'
tmean: no visible global function definition for 'matplot'
tmean: no visible global function definition for 'matlines'
tmean: no visible global function definition for 'lines'
tmean: no visible global function definition for 'legend'
tmean: no visible global function definition for 'colorRampPalette'
Undefined global functions or variables:
  colorRampPalette gray legend lines matlines matplot par polygon runif
  wilcox.test
Consider adding
  importFrom("grDevices", "colorRampPalette", "gray")
  importFrom("graphics", "legend", "lines", "matlines", "matplot", "par",
             "polygon")
  importFrom("stats", "runif", "wilcox.test")
to your NAMESPACE file.
Error(s) in re-building vignettes:
--- re-building 'derivmkts-vignette.Rmd' using rmarkdown
Quitting from lines 24-42 (derivmkts-vignette.Rmd) 
Error: processing vignette 'derivmkts-vignette.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'derivmkts-vignette.Rmd'

SUMMARY: processing the following file failed:
  'derivmkts-vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/describedata.Rcheck/00install.out' for details.
Running examples in 'descriptr-Ex.R' failed
The error most likely occurred in:

> ### Name: ds_auto_freq_table
> ### Title: Multiple One & Two Way Tables
> ### Aliases: ds_auto_freq_table ds_auto_cross_table ds_tway_tables
> ###   ds_oway_tables
> 
> ### ** Examples
> 
> # multiple one way tables
> ds_auto_freq_table(mtcarz)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: ds_auto_freq_table ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'categorical-data.Rmd' using rmarkdown
Quitting from lines 20-22 (categorical-data.Rmd) 
Error: processing vignette 'categorical-data.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'categorical-data.Rmd'

--- re-building 'continuous-data.Rmd' using rmarkdown
Quitting from lines 20-22 (continuous-data.Rmd) 
Error: processing vignette 'continuous-data.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'continuous-data.Rmd'

--- re-building 'tests_and_coverage.Rmd' using rmarkdown
--- finished re-building 'tests_and_coverage.Rmd'

--- re-building 'visualization.Rmd' using rmarkdown
Quitting from lines 20-22 (visualization.Rmd) 
Error: processing vignette 'visualization.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'visualization.Rmd'

SUMMARY: processing the following files failed:
  'categorical-data.Rmd' 'continuous-data.Rmd' 'visualization.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/desctable.Rcheck/00install.out' for details.
Package suggested but not available for checking: 'RDCOMClient'
installed size is  7.6Mb
  sub-directories of 1Mb or more:
    R      1.6Mb
    doc    1.7Mb
    help   1.5Mb
    libs   2.4Mb
ds: no visible global function definition for 'is.ts'
ds: no visible global function definition for 'frequency'
getds: no visible global function definition for 'resid'
getds: no visible global function definition for 'lm.fit'
getds: no visible global function definition for 'sd'
getds: no visible global function definition for 'var'
getds: no visible global function definition for 'fitted'
Undefined global functions or variables:
  fitted frequency is.ts lm.fit resid sd var
Consider adding
  importFrom("stats", "fitted", "frequency", "is.ts", "lm.fit", "resid",
             "sd", "var")
to your NAMESPACE file.
Malformed Title field: should not end in a period.
arrayUpdate : pairUpdate: no visible global function definition for
  'runif'
conditionUpdate: no visible global function definition for 'runif'
designGG: no visible global function definition for 'runif'
experimentDesignTable: no visible global function definition for
  'write.csv'
plotAllScores: no visible global function definition for 'png'
plotAllScores: no visible global function definition for 'par'
plotAllScores: no visible global function definition for 'text'
plotAllScores: no visible global function definition for 'dev.off'
Undefined global functions or variables:
  dev.off par png runif text write.csv
Consider adding
  importFrom("grDevices", "dev.off", "png")
  importFrom("graphics", "par", "text")
  importFrom("stats", "runif")
  importFrom("utils", "write.csv")
to your NAMESPACE file.
Packages which this enhances but not available for checking:
  'gurobi', 'Rcplex'
Running examples in 'designr-Ex.R' failed
The error most likely occurred in:

> ### Name: design.contrasts
> ### Title: Retrieve contrast codes for a design
> ### Aliases: design.contrasts contrast.names
> 
> ### ** Examples
> 
> 
> 
> des <- fixed.factor("Factor1", c("1A","1B")) +
+        fixed.factor("Factor2", c("2A","2B")) +
+        random.factor("Subject", c("Factor1"))
Error in inDL(x, as.logical(local), as.logical(now), ...) : 
  unable to load shared object 'D:/temp/RtmpeuPhYS/RLIBS_56a82255540e/dplyr/libs/x64/dplyr.dll':
  LoadLibrary failure:  Das angegebene Modul wurde nicht gefunden.
Calls: + ... getNamespace -> loadNamespace -> library.dynam -> dyn.load -> inDL
Execution halted
Error(s) in re-building vignettes:
--- re-building 'design-to-dataframe.Rmd' using rmarkdown
Quitting from lines 23-30 (design-to-dataframe.Rmd) 
Error: processing vignette 'design-to-dataframe.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in inDL(x, as.logical(local), as.logical(now), ...):
 unable to load shared object 'D:/temp/RtmpeuPhYS/RLIBS_56a82255540e/dplyr/libs/x64/dplyr.dll':
  LoadLibrary failure:  Das angegebene Modul wurde nicht gefunden.

--- failed re-building 'design-to-dataframe.Rmd'

SUMMARY: processing the following file failed:
  'design-to-dataframe.Rmd'

Error: Vignette re-building failed.
Execution halted
Malformed Description field: should contain one or more complete sentences.
fs.agreement.part: no visible global function definition for 'as.dist'
fs.agreement.part: no visible global function definition for 'cor'
fs.leave.k.out.combn: no visible global function definition for 'sd'
fs.leave.k.out.sample: no visible global function definition for 'sd'
fs.rd: no visible global function definition for 'pchisq'
fs.selection: no visible global function definition for 'p.adjust'
plot.FIT: no visible global function definition for 'qchisq'
plot.FIT: no visible global function definition for 'ppoints'
plot.FIT: no visible global function definition for 'points'
plot.FIT: no visible global function definition for 'abline'
plotJn: no visible global function definition for 'points'
robust.distance.signed: no visible global function definition for
  'mahalanobis'
snowball: no visible global function definition for 'is'
snowball: no visible global function definition for 'median'
weight.sd: no visible binding for global variable 'sd'
Undefined global functions or variables:
  abline as.dist cor is mahalanobis median p.adjust pchisq points
  ppoints qchisq sd
Consider adding
  importFrom("graphics", "abline", "points")
  importFrom("methods", "is")
  importFrom("stats", "as.dist", "cor", "mahalanobis", "median",
             "p.adjust", "pchisq", "ppoints", "qchisq", "sd")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
installed size is  5.2Mb
  sub-directories of 1Mb or more:
    extdata   2.1Mb
    libs      2.2Mb
Package in Depends field not imported from: 'dplR'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
There are ::: calls to the package's namespace in its code. A package
  almost never needs to use ::: for its own objects:
  '.get' 'InteractiveDetrending' 'RemoveTrend'
GNU make is a SystemRequirements.
Error(s) in re-building vignettes:
--- re-building 'my-vignette.Rmd' using rmarkdown
Quitting from lines 38-42 (my-vignette.Rmd) 
Error: processing vignette 'my-vignette.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'my-vignette.Rmd'

SUMMARY: processing the following file failed:
  'my-vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dextergui.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dexterMST.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dexter.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/DFA.CANCOR.Rcheck/00install.out' for details.
simulate_dataframe : generate_dumb_answer: no visible global function
  definition for 'rbinom'
simulate_dataframe : generate_dumb_answer: no visible global function
  definition for 'rnorm'
simulate_dataframe : generate_initial: no visible global function
  definition for 'rbinom'
simulate_dataframe: no visible binding for global variable 'randu'
simulate_dataframe: no visible global function definition for 'rbinom'
simulate_dataframe: no visible global function definition for 'rnorm'
simulate_dataframe: no visible global function definition for 'rpois'
simulate_dataframe : add_NAs: no visible global function definition for
  'rbinom'
Undefined global functions or variables:
  randu rbinom rnorm rpois
Consider adding
  importFrom("datasets", "randu")
  importFrom("stats", "rbinom", "rnorm", "rpois")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dfidx.Rcheck/00install.out' for details.
Running examples in 'dfoliatR-Ex.R' failed
The error most likely occurred in:

> ### Name: outbreak
> ### Title: Composite defoliation series to determine outbreak events
> ### Aliases: outbreak
> 
> ### ** Examples
> 
> data("dmj_defol")
> head(outbreak(dmj_defol))
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: head ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'intro-to-dfoliatR.Rmd' using rmarkdown
Quitting from lines 103-104 (intro-to-dfoliatR.Rmd) 
Error: processing vignette 'intro-to-dfoliatR.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'intro-to-dfoliatR.Rmd'

SUMMARY: processing the following file failed:
  'intro-to-dfoliatR.Rmd'

Error: Vignette re-building failed.
Execution halted
installed size is  8.5Mb
  sub-directories of 1Mb or more:
    libs   7.9Mb
GNU make is a SystemRequirements.
makeAdjMatrix: no visible global function definition for 'combn'
plotPosteriorN: no visible global function definition for 'title'
plotPosteriorN: no visible global function definition for 'lines'
plotPosteriorN: no visible global function definition for 'legend'
venn3: no visible global function definition for 'runif'
venn3: no visible global function definition for 'points'
venn3: no visible global function definition for 'lines'
venn3: no visible global function definition for 'text'
venn4: no visible global function definition for 'lines'
venn4: no visible global function definition for 'runif'
venn4: no visible global function definition for 'points'
Undefined global functions or variables:
  combn legend lines points runif text title
Consider adding
  importFrom("graphics", "legend", "lines", "points", "text", "title")
  importFrom("stats", "runif")
  importFrom("utils", "combn")
to your NAMESPACE file.
Package suggested but not available for checking: 'doMC'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dggridR.Rcheck/00install.out' for details.
Running examples in 'dgmb-Ex.R' failed
The error most likely occurred in:

> ### Name: dgmb-package
> ### Title: Simulating Data for PLS Mode B Structural Models
> ### Aliases: dgmb-package dgmb
> ### Keywords: package
> 
> ### ** Examples
> 
> dgmbGui()
 --------------------------------------------------
| Simulating Data for PLS Mode B Structural Models |
| Version: 1.2                                     |
| Depends: abind, tcltk, MASS                      |
| Licence: GPL >= 2                                |
| System Requirements: tktable, BWidget            |
 --------------------------------------------------
Warning in tclRequire("Tktable") : Tcl package 'Tktable' not found
Error in structure(.External(.C_dotTclObjv, objv), class = "tclObj") : 
  [tcl] invalid command name "table".
Calls: dgmbGui -> tkwidget -> tcl -> .Tcl.objv -> structure
Execution halted
installed size is  6.3Mb
  sub-directories of 1Mb or more:
    data   6.3Mb
cvm.test : cvm.pval.disc: no visible global function definition for
  'integrate'
cvm.test : cvm.pval.disc: no visible global function definition for
  'dchisq'
cvm.test : cvm.pval.disc: no visible global function definition for
  'nlm'
cvm.test : cvm.stat.disc: no visible global function definition for
  'knots'
cvm.test : cvm.pval.disc.sim: no visible global function definition for
  'knots'
cvm.test : cvm.pval.disc.sim: no visible global function definition for
  'runif'
cvm.test: no visible global function definition for 'is.stepfun'
cvm.test: no visible global function definition for 'knots'
ks.test : exact.pval : ts.pval: no visible global function definition
  for 'ecdf'
ks.test : sim.pval: no visible global function definition for 'runif'
ks.test : sim.pval : getks: no visible global function definition for
  'ecdf'
ks.test: no visible global function definition for 'is.stepfun'
ks.test: no visible global function definition for 'knots'
ks.test: no visible global function definition for 'ecdf'
Undefined global functions or variables:
  dchisq ecdf integrate is.stepfun knots nlm runif
Consider adding
  importFrom("stats", "dchisq", "ecdf", "integrate", "is.stepfun",
             "knots", "nlm", "runif")
to your NAMESPACE file.
installed size is 14.1Mb
  sub-directories of 1Mb or more:
    doc           9.7Mb
    htmlwidgets   2.8Mb
Running examples in 'DiagrammeR-Ex.R' failed
The error most likely occurred in:

> ### Name: add_balanced_tree
> ### Title: Add a balanced tree to the graph
> ### Aliases: add_balanced_tree
> 
> ### ** Examples
> 
> # Create a new graph and
> # add 2 different types of
> # balanced trees of height
> # 2 (branching twice) and
> # different branching ratios
> graph <-
+   create_graph() %>%
+   add_balanced_tree(
+     k = 2,
+     h = 2,
+     type = "binary") %>%
+   add_balanced_tree(
+     k = 3,
+     h = 2,
+     type = "tertiary")
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: %>% ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'graphviz-mermaid.Rmd' using rmarkdown
--- finished re-building 'graphviz-mermaid.Rmd'

--- re-building 'node-edge-data-frames.Rmd' using rmarkdown
Quitting from lines 59-73 (node-edge-data-frames.Rmd) 
Error: processing vignette 'node-edge-data-frames.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'node-edge-data-frames.Rmd'

--- re-building 'selections.Rmd' using rmarkdown
Quitting from lines 37-50 (selections.Rmd) 
Error: processing vignette 'selections.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'selections.Rmd'

--- re-building 'simple-graphs-ndfs-edfs.Rmd' using rmarkdown
Quitting from lines 37-39 (simple-graphs-ndfs-edfs.Rmd) 
Error: processing vignette 'simple-graphs-ndfs-edfs.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'simple-graphs-ndfs-edfs.Rmd'

--- re-building 'traversals.Rmd' using rmarkdown
Quitting from lines 33-39 (traversals.Rmd) 
Error: processing vignette 'traversals.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'traversals.Rmd'

SUMMARY: processing the following files failed:
  'node-edge-data-frames.Rmd' 'selections.Rmd'
  'simple-graphs-ndfs-edfs.Rmd' 'traversals.Rmd'

Error: Vignette re-building failed.
Execution halted
Running 'testthat.R' [11s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(dialr)
  > 
  > test_check("dialr")
  -- 1. Error: (unknown) (@test-tibble.R#3)  -------------------------------------
  package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::library(dplyr)
   2. base::tryCatch(...)
   3. base:::tryCatchList(expr, classes, parentenv, handlers)
   4. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   5. value[[3L]](cond)
  
  == testthat results  ===========================================================
  [ OK: 158 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: (unknown) (@test-tibble.R#3) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'dialr.Rmd' using rmarkdown
Quitting from lines 18-21 (dialr.Rmd) 
Error: processing vignette 'dialr.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'dialr.Rmd'

--- re-building 'oneshot.Rmd' using rmarkdown
Warning: ph_valid() is soft deprecated as of dialr 0.2.0
please use is_valid() instead
Warning: ph_possible() is soft deprecated as of dialr 0.2.0
please use is_possible() instead
Warning: ph_region() is soft deprecated as of dialr 0.2.0
please use get_region() instead
Warning: ph_type() is soft deprecated as of dialr 0.2.0
please use get_type() instead
Warning: ph_format() is soft deprecated as of dialr 0.2.0
please use format.phone() instead
Warning: ph_format() is soft deprecated as of dialr 0.2.0
please use format.phone() instead
--- finished re-building 'oneshot.Rmd'

SUMMARY: processing the following file failed:
  'dialr.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dials.Rcheck/00install.out' for details.
Running examples in 'diceR-Ex.R' failed
The error most likely occurred in:

> ### Name: CSPA
> ### Title: Cluster-based Similarity Partitioning Algorithm (CSPA)
> ### Aliases: CSPA
> 
> ### ** Examples
> 
> data(hgsc)
> dat <- hgsc[1:100, 1:50]
> x <- consensus_cluster(dat, nk = 4, reps = 4, algorithms = c("hc", "diana"),
+ progress = FALSE)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: consensus_cluster ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'overview.Rmd' using rmarkdown
Quitting from lines 40-46 (overview.Rmd) 
Error: processing vignette 'overview.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'overview.Rmd'

SUMMARY: processing the following file failed:
  'overview.Rmd'

Error: Vignette re-building failed.
Execution halted
dichromat: no visible global function definition for 'col2rgb'
dichromat: no visible global function definition for 'predict'
dichromat: no visible global function definition for 'rgb'
Undefined global functions or variables:
  col2rgb predict rgb
Consider adding
  importFrom("grDevices", "col2rgb", "rgb")
  importFrom("stats", "predict")
to your NAMESPACE file.
le.pesquisa: no visible global function definition for 'txtProgressBar'
le.pesquisa: no visible global function definition for 'type.convert'
le.pesquisa: no visible global function definition for
  'setTxtProgressBar'
Undefined global functions or variables:
  setTxtProgressBar txtProgressBar type.convert
Consider adding
  importFrom("utils", "setTxtProgressBar", "txtProgressBar",
             "type.convert")
to your NAMESPACE file.
Running examples in 'Dict-Ex.R' failed
The error most likely occurred in:

> ### Name: Dict
> ### Title: R6 Based Key-Value Dictionary Implementation
> ### Aliases: Dict dict
> 
> ### ** Examples
> 
> 
> ## ------------------------------------------------
> ## Method `Dict$new`
> ## ------------------------------------------------
> 
> ages <- Dict$new(
+   Charlie = 40L,
+   Alice = 30L,
+   Bob = 25L,
+   .class = "integer",
+   .overwrite = TRUE
+ )
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: <Anonymous> ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/didrooRFM.Rcheck/00install.out' for details.
Malformed Title field: should not end in a period.
Package in Depends field not imported from: 'methods'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
L2eV: no visible binding for global variable 'constants'
L2w: no visible binding for global variable 'constants'
dielectric: no visible global function definition for 'new'
dielectric2plot: no visible global function definition for 'reshape'
eV2L: no visible binding for global variable 'constants'
t2eV: no visible binding for global variable 'constants'
Undefined global functions or variables:
  constants new reshape
Consider adding
  importFrom("methods", "new")
  importFrom("stats", "reshape")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Packages in Depends field not imported from:
  'PropCIs' 'gee' 'rootSolve'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
diffpci: no visible global function definition for 'diffpropci.Wald.mp'
diffpci: no visible global function definition for 'diffpropci.mp'
diffpci: no visible global function definition for 'scoreci.mp'
exact.cond : exactci: no visible global function definition for 'qf'
exact.midp : binom.midp : f.low: no visible global function definition
  for 'dbinom'
exact.midp : binom.midp : f.low: no visible global function definition
  for 'pbinom'
exact.midp : binom.midp : f.up: no visible global function definition
  for 'dbinom'
exact.midp : binom.midp : f.up: no visible global function definition
  for 'pbinom'
exact.midp : binom.midp : one.ci: no visible global function definition
  for 'uniroot'
np.nv: no visible global function definition for 'qnorm'
np.t: no visible global function definition for 'qt'
uncond: no visible global function definition for 'qnorm'
wald.cc: no visible global function definition for 'qnorm'
wilson: no visible global function definition for 'qnorm'
wilson: no visible global function definition for 'uniroot.all'
wilson.cc: no visible global function definition for 'qnorm'
wilson.cc: no visible global function definition for 'uniroot.all'
wilson.phi: no visible global function definition for 'qnorm'
wilson.phi: no visible global function definition for 'uniroot.all'
Undefined global functions or variables:
  dbinom diffpropci.Wald.mp diffpropci.mp pbinom qf qnorm qt scoreci.mp
  uniroot uniroot.all
Consider adding
  importFrom("stats", "dbinom", "pbinom", "qf", "qnorm", "qt", "uniroot")
to your NAMESPACE file.
Running 'testthat.R' [2s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(diffdf)
  > 
  > test_check("diffdf")
  
  Attaching package: 'purrr'
  
  The following object is masked from 'package:testthat':
  
      is_null
  
  Error in library.dynam(lib, package, package.lib) : 
    DLL 'dplyr' not found: maybe not installed for this architecture?
  Calls: test_check ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
  Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/diffEnrich.Rcheck/00install.out' for details.
installed size is 10.8Mb
  sub-directories of 1Mb or more:
    doc  10.8Mb
Running examples in 'DiffNet-Ex.R' failed
The error most likely occurred in:

> ### Name: diffnet
> ### Title: Detection of Statistically Significant Changes in Paired
> ###   Biological Networks
> ### Aliases: diffnet
> 
> ### ** Examples
> 
> library("DiffNet")
> # this step is optional, it helps speed up calculations, run in parallel on 2 processors
> library(doParallel)
Loading required package: foreach
Loading required package: iterators
Loading required package: parallel
> registerDoParallel(2)
> # Run the differential network analysis tehcnique on sample data
> p <- diffnet()
> 
> 
> 
> ### * <FOOTER>
> ###
> cleanEx()

detaching 'package:doParallel', 'package:parallel',
  'package:iterators', 'package:foreach'

Error: connections left open:
	<-CRANwin.fb05.statistik.uni-dortmund.de:11141 (sockconn)
	<-CRANwin.fb05.statistik.uni-dortmund.de:11141 (sockconn)
Execution halted
Running examples in 'DiffNet-Ex.R' failed
The error most likely occurred in:

> ### Name: diffnet
> ### Title: Detection of Statistically Significant Changes in Paired
> ###   Biological Networks
> ### Aliases: diffnet
> 
> ### ** Examples
> 
> library("DiffNet")
> # this step is optional, it helps speed up calculations, run in parallel on 2 processors
> library(doParallel)
Loading required package: foreach
Loading required package: iterators
Loading required package: parallel
> registerDoParallel(2)
> # Run the differential network analysis tehcnique on sample data
> p <- diffnet()
> 
> 
> 
> ### * <FOOTER>
> ###
> cleanEx()

detaching 'package:doParallel', 'package:parallel',
  'package:iterators', 'package:foreach'

Error: connections left open:
	<-CRANwin.fb05.statistik.uni-dortmund.de:11228 (sockconn)
	<-CRANwin.fb05.statistik.uni-dortmund.de:11228 (sockconn)
Execution halted
Running examples in 'diffrprojectswidget-Ex.R' failed
The error most likely occurred in:

> ### Name: dp_prepare_data_table
> ### Title: function for preparing data for tabulation
> ### Aliases: dp_prepare_data_table
> 
> ### ** Examples
> 
> 
> library(diffrprojects)
Loading required package: stringb
Loading required package: rtext
> library(diffrprojectswidget)
> 
> dp <-
+ diffrproject$new()$
+   text_add(list(text_version_1, text_version_2))$
+   text_link()$
+   text_align( maxDist = 1 )
rtext : initializing
rtext : initializing
diffrproject : - doing alignment
 - tokenizing text
 - cleaning token
 - ignoring token
 - doing distance calculation and alignment
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: <Anonymous> ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
installed size is  8.0Mb
  sub-directories of 1Mb or more:
    doc    5.1Mb
    libs   2.0Mb
installed size is  8.2Mb
  sub-directories of 1Mb or more:
    doc    5.6Mb
    libs   2.0Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/DIFplus.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/digest.Rcheck/00install.out' for details.
Malformed Title field: should not end in a period.
Packages in Depends field not imported from:
  'Rcpp' 'igraph'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Running examples in 'dimRed-Ex.R' failed
The error most likely occurred in:

> ### Name: plot_R_NX
> ### Title: plot_R_NX
> ### Aliases: plot_R_NX
> 
> ### ** Examples
> 
> 
> ## define which methods to apply
> embed_methods <- c("Isomap", "PCA")
> ## load test data set
> data_set <- loadDataSet("3D S Curve", n = 200)
> ## apply dimensionality reduction
> data_emb <- lapply(embed_methods, function(x) embed(data_set, x))
2020-08-27 18:40:59: Isomap START
2020-08-27 18:40:59: constructing knn graph
2020-08-27 18:40:59: calculating geodesic distances
2020-08-27 18:40:59: Classical Scaling
> names(data_emb) <- embed_methods
> ## plot the R_NX curves:
> plot_R_NX(data_emb) +
+     ggplot2::theme(legend.title = ggplot2::element_blank(),
+                    legend.position = c(0.5, 0.1),
+                    legend.justification = c(0.5, 0.1))
Error in chckpkg("tidyr") : 
  require 'tidyr' package, install it using install.packages('tidyr')
Calls: plot_R_NX -> chckpkg
Execution halted
aLine: no visible global function definition for 'lines'
aLine: no visible global function definition for 'ecdf'
dip.test: no visible global function definition for 'complete.cases'
dip.test: no visible global function definition for 'runif'
dip.test: no visible global function definition for 'approx'
plot.dip: no visible global function definition for 'par'
plot.dip: no visible global function definition for 'ecdf'
plot.dip: no visible global function definition for 'title'
plot.dip: no visible global function definition for 'abline'
plot.dip: no visible global function definition for 'axis'
plot.dip: no visible global function definition for 'legend'
Undefined global functions or variables:
  abline approx axis complete.cases ecdf legend lines par runif title
Consider adding
  importFrom("graphics", "abline", "axis", "legend", "lines", "par",
             "title")
  importFrom("stats", "approx", "complete.cases", "ecdf", "runif")
to your NAMESPACE file.
Output for data("exHartigan", package = "diptest"):
  'exHartigan' data is identical to 'statfaculty' and hence deprecated.
   Use the 'statfaculty' instead
Error(s) in re-building vignettes:
--- re-building 'DirectEffects.Rmd' using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Quitting from lines 14-20 (DirectEffects.Rmd) 
Error: processing vignette 'DirectEffects.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'DirectEffects.Rmd'

SUMMARY: processing the following file failed:
  'DirectEffects.Rmd'

Error: Vignette re-building failed.
Execution halted
Error(s) in re-building vignettes:
--- re-building 'examples.Rmd' using knitr
Quitting from lines 117-160 (examples.Rmd) 
Error: processing vignette 'examples.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'examples.Rmd'

SUMMARY: processing the following file failed:
  'examples.Rmd'

Error: Vignette re-building failed.
Execution halted
Malformed Title field: should not end in a period.
nullTest: no visible global function definition for 'rmultinom'
rdirichlet: no visible global function definition for 'rgamma'
simPop: no visible global function definition for 'rnorm'
simPop: no visible global function definition for 'rmultinom'
Undefined global functions or variables:
  rgamma rmultinom rnorm
Consider adding
  importFrom("stats", "rgamma", "rmultinom", "rnorm")
to your NAMESPACE file.
installed size is 20.2Mb
  sub-directories of 1Mb or more:
    libs  19.9Mb
Error(s) in re-building vignettes:
--- re-building 'disaggregation.Rmd' using rmarkdown
Quitting from lines 42-53 (disaggregation.Rmd) 
Error: processing vignette 'disaggregation.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in inDL(x, as.logical(local), as.logical(now), ...):
 unable to load shared object 'D:/temp/RtmpInIuJf/RLIBS_770015181727/dplyr/libs/x64/dplyr.dll':
  LoadLibrary failure:  Das angegebene Modul wurde nicht gefunden.

--- failed re-building 'disaggregation.Rmd'

SUMMARY: processing the following file failed:
  'disaggregation.Rmd'

Error: Vignette re-building failed.
Execution halted
Malformed Description field: should contain one or more complete sentences.
rdisclap: no visible global function definition for 'runif'
Undefined global functions or variables:
  runif
Consider adding
  importFrom("stats", "runif")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/discord.Rcheck/00install.out' for details.
Running examples in 'discourseGT-Ex.R' failed
The error most likely occurred in:

> ### Name: plotNGTData
> ### Title: Plot non-graphical parameters
> ### Aliases: plotNGTData
> 
> ### ** Examples
> 
> df <- sampleData1
> plotNGTData(df, convoMinutes = 60, iscsvfile = FALSE)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: plotNGTData ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
p.discrete.adjust : <anonymous>: no visible global function definition
  for 'stepfun'
Undefined global functions or variables:
  stepfun
Consider adding
  importFrom("stats", "stepfun")
to your NAMESPACE file.
Malformed Title field: should not end in a period.
value: no visible global function definition for 'qchisq'
Undefined global functions or variables:
  qchisq
Consider adding
  importFrom("stats", "qchisq")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/discrim.Rcheck/00install.out' for details.
Running examples in 'discSurv-Ex.R' failed
The error most likely occurred in:

> ### Name: aucUno
> ### Title: Area under the Curve Estimation
> ### Aliases: aucUno
> ### Keywords: survival
> 
> ### ** Examples
> 
> #####################################################
> # Example with cross validation and unemployment data 
> 
> library(Ecdat)
Loading required package: Ecfun

Attaching package: 'Ecfun'

The following object is masked from 'package:base':

    sign


Attaching package: 'Ecdat'

The following object is masked from 'package:datasets':

    Orange

> library(caret)
Loading required package: lattice
Loading required package: ggplot2
Error: package or namespace load failed for 'caret' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Running examples in 'DisimForMixed-Ex.R' failed
The error most likely occurred in:

> ### Name: calcDissimMat
> ### Title: Calculate Dissimilarity Matrix for Mixed Attributes.
> ### Aliases: calcDissimMat
> 
> ### ** Examples
> 
> QualiVars <- data.frame(Qlvar1 = c("A","B","A","C","C","A"), Qlvar2 = c("Q","Q","R","Q","R","Q"))
> QuantVars <- data.frame(Qnvar1 = c(1.5,3.2,4.9,5,2.8,3.1), Qnvar2 = c(4.8,2,1.1,5.8,3.1,2.2))
> DisSimMatCalcd <- calcDissimMat(QualiVars, QuantVars)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: calcDissimMat ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/disk.frame.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dispRity.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dissever.Rcheck/00install.out' for details.
densest: no visible global function definition for 'weighted.mean'
diss: no visible global function definition for 'cov'
neighbors: no visible global function definition for 'cov'
Undefined global functions or variables:
  cov weighted.mean
Consider adding
  importFrom("stats", "cov", "weighted.mean")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/Distance.Rcheck/00install.out' for details.
Running examples in 'disto-Ex.R' failed
The error most likely occurred in:

> ### Name: as.data.frame.disto
> ### Title: Convert a disto object to dataframe
> ### Aliases: as.data.frame.disto
> 
> ### ** Examples
> 
> temp <- stats::dist(iris[,1:4])
> dio  <- disto(objectname = "temp")
> dio
disto with backend: dist
size: 150
> head(as.data.frame(dio))
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: head ... loadNamespace -> namespaceImport -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'vignette_disto.Rmd' using rmarkdown
Quitting from lines 42-72 (vignette_disto.Rmd) 
Error: processing vignette 'vignette_disto.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'vignette_disto.Rmd'

SUMMARY: processing the following file failed:
  'vignette_disto.Rmd'

Error: Vignette re-building failed.
Execution halted
installed size is  7.4Mb
  sub-directories of 1Mb or more:
    R      3.6Mb
    help   1.3Mb
    libs   2.3Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/distrr.Rcheck/00install.out' for details.
Running 'spelling.R' [0s]
  Running 'testthat.R' [17s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > test_check("dittodb")
  Loading required package: dittodb
  Loading required package: DBI
  -- 1. Error: (unknown) (@test-dbplyr-integration.R#2)  -------------------------
  package or namespace load failed for 'dbplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::library(dbplyr)
   2. base::tryCatch(...)
   3. base:::tryCatchList(expr, classes, parentenv, handlers)
   4. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   5. value[[3L]](cond)
  
  == testthat results  ===========================================================
  [ OK: 152 | SKIPPED: 7 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: (unknown) (@test-dbplyr-integration.R#2) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'developing-dittodb.Rmd' using rmarkdown
--- finished re-building 'developing-dittodb.Rmd'

--- re-building 'dittodb.Rmd' using rmarkdown
--- finished re-building 'dittodb.Rmd'

--- re-building 'nycflights.Rmd' using rmarkdown
--- finished re-building 'nycflights.Rmd'

--- re-building 'travelling.Rmd' using rmarkdown
Quitting from lines 161-186 (travelling.Rmd) 
Error: processing vignette 'travelling.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'travelling.Rmd'

SUMMARY: processing the following file failed:
  'travelling.Rmd'

Error: Vignette re-building failed.
Execution halted
Malformed Title field: should not end in a period.
prepare_Rd: extract.val.Rd:25-26: Dropping empty section \note
prepare_Rd: extract.val.Rd:27: Dropping empty section \seealso
installed size is  5.7Mb
  sub-directories of 1Mb or more:
    libs   4.5Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/DiversityOccupancy.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/divest.Rcheck/00install.out' for details.
'library' or 'require' call to 'glmnet' which was already attached by Depends.
  Please remove these calls from your code.
Packages in Depends field not imported from:
  'glmnet' 'tcltk'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Running examples in 'diyar-Ex.R' failed
The error most likely occurred in:

> ### Name: episode_group
> ### Title: Episode grouping for case definitions and record deduplication
> ### Aliases: episode_group fixed_episodes rolling_episodes
> 
> ### ** Examples
> 
> library(diyar)
> data(infections)
> data(hospital_admissions)
> 
> db_1 <- infections
> db_1$patient_id <- c(rep("PID 1",8), rep("PID 2",3))
> 
> # Fixed episodes
> # One 16-day (15-day difference) episode per patient
> db_1$epids_p <- fixed_episodes(date=db_1$date, strata = db_1$patient_id,
+ case_length = 15, episodes_max = 1, display = FALSE)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: fixed_episodes ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'episode_group.Rmd' using rmarkdown
Quitting from lines 76-80 (episode_group.Rmd) 
Error: processing vignette 'episode_group.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'episode_group.Rmd'

--- re-building 'number_line.Rmd' using rmarkdown
--- finished re-building 'number_line.Rmd'

--- re-building 'record_group.Rmd' using rmarkdown
Quitting from lines 47-60 (record_group.Rmd) 
Error: processing vignette 'record_group.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'record_group.Rmd'

SUMMARY: processing the following files failed:
  'episode_group.Rmd' 'record_group.Rmd'

Error: Vignette re-building failed.
Execution halted
Running 'testthat.R' [48s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > # Workaround https://github.com/hadley/testthat/issues/144
  > Sys.setenv(R_TESTS="")
  > 
  > library(testthat)
  > library(httptest)
  > library(dkanr)
  > 
  > 
  > test_check("dkanr")
  -- 1. Error: data.frame is returned by default (@test-ds_search_all.R#25)  -----
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. dkanr::ds_search_all(resource_id = "65c4458b-1804-4bf2-b647-b2744648f647")
   2. dplyr::bind_rows
   3. base::getExportedValue(pkg, name)
   4. base::asNamespace(ns)
   5. base::getNamespace(ns)
   6. base::loadNamespace(name)
   7. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 91 | SKIPPED: 0 | WARNINGS: 1 | FAILED: 1 ]
  1. Error: data.frame is returned by default (@test-ds_search_all.R#25) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'getting_started_with_dkanr.Rmd' using rmarkdown

Attaching package: 'purrr'

The following object is masked from 'package:testthat':

    is_null

Quitting from lines 38-42 (getting_started_with_dkanr.Rmd) 
Error: processing vignette 'getting_started_with_dkanr.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'getting_started_with_dkanr.Rmd'

SUMMARY: processing the following file failed:
  'getting_started_with_dkanr.Rmd'

Error: Vignette re-building failed.
Execution halted
installed size is 18.0Mb
  sub-directories of 1Mb or more:
    include  15.9Mb
    libs      1.8Mb
Package suggested but not available for checking: 'asreml'
'library' or 'require' calls to packages already attached by Depends:
  'nlme' 'wgaim'
  Please remove these calls from your code.
'library' or 'require' call to 'asreml' in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Packages in Depends field not imported from:
  'ibdreg' 'mgcv' 'nlme' 'qtl' 'wgaim'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Unexported object imported by a ':::' call: 'qtl:::adjust.rf.ri'
  See the note in ?`:::` about the use of this operator.
Foreign function call to a different package:
  .C(cfunc, ..., PACKAGE = "qtl")
See chapter 'System and foreign language interfaces' in the 'Writing R
Extensions' manual.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/DLMtool.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dlookr.Rcheck/00install.out' for details.
Error(s) in re-building vignettes:
--- re-building 'dlstats.Rmd' using rmarkdown
Quitting from lines 31-34 (dlstats.Rmd) 
Error: processing vignette 'dlstats.Rmd' failed with diagnostics:
package or namespace load failed for 'tidyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'dlstats.Rmd'

SUMMARY: processing the following file failed:
  'dlstats.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dmai.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dmbc.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/DMCfun.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dmdScheme.Rcheck/00install.out' for details.
Package suggested but not available for checking: 'rPython'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dMod.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dm.Rcheck/00install.out' for details.
Running examples in 'dmtools-Ex.R' failed
The error most likely occurred in:

> ### Name: check
> ### Title: Check
> ### Aliases: check
> 
> ### ** Examples
> 
> id <- c("01", "02", "03")
> screen_date_E1 <- c("1991-03-13", "1991-03-07", "1991-03-08")
> rand_date_E2 <- c("1991-03-15", "1991-03-11", "1991-03-10")
> ph_date_E3 <- c("1991-03-21", "1991-03-16", "1991-03-16")
> bio_date_E3 <- c("1991-03-23", "1991-03-16", "1991-03-16")
> 
> df <- data.frame(id, screen_date_E1, rand_date_E2, ph_date_E3, bio_date_E3,
+ stringsAsFactors = FALSE)
> 
> timeline <- system.file("dates.xlsx", package = "dmtools")
> obj_date <- date(timeline, id, dplyr::contains)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: date ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'about_short.Rmd' using rmarkdown

Attaching package: 'dmtools'

The following object is masked from 'package:base':

    date

Quitting from lines 32-39 (about_short.Rmd) 
Error: processing vignette 'about_short.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'about_short.Rmd'

--- re-building 'dmtools_intro.Rmd' using rmarkdown

Attaching package: 'dmtools'

The following object is masked from 'package:base':

    date

Quitting from lines 47-54 (dmtools_intro.Rmd) 
Error: processing vignette 'dmtools_intro.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'dmtools_intro.Rmd'

SUMMARY: processing the following files failed:
  'about_short.Rmd' 'dmtools_intro.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dmutate.Rcheck/00install.out' for details.
Running examples in 'DMwR2-Ex.R' failed
The error most likely occurred in:

> ### Name: knnImputation
> ### Title: Fill in NA values with the values of the nearest neighbours
> ### Aliases: knnImputation
> ### Keywords: models
> 
> ### ** Examples
> 
> data(algae)
> cleanAlgae <- knnImputation(algae)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: knnImputation ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Warning: no function found corresponding to methods exports from 'DMwR' for: 'show'

A namespace must be able to be loaded with just the base namespace
loaded: otherwise if the namespace gets loaded by a saved object, the
session will be unable to start.

Probably some imports need to be declared in the NAMESPACE file.
Packages in Depends field not imported from:
  'grid' 'lattice' 'methods'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Missing object imported by a ':::' call: 'rpart:::rpconvert'
Unexported objects imported by ':::' calls:
  'rpart:::rpart.branch' 'rpart:::rpartco'
  'rpart:::string.bounding.box'
  See the note in ?`:::` about the use of this operator.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dnapath.Rcheck/00install.out' for details.
GNU make is a SystemRequirements.
DNMF: no visible global function definition for 'runif'
NMFpval: no visible global function definition for 'p.adjust'
ndNMF: no visible global function definition for 'runif'
rnk: no visible global function definition for 'write.table'
Undefined global functions or variables:
  p.adjust runif write.table
Consider adding
  importFrom("stats", "p.adjust", "runif")
  importFrom("utils", "write.table")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dnr.Rcheck/00install.out' for details.
Error(s) in re-building vignettes:
--- re-building 'dobin.Rmd' using rmarkdown
Quitting from lines 22-34 (dobin.Rmd) 
Error: processing vignette 'dobin.Rmd' failed with diagnostics:
Package OutliersO3 is needed for the vignette. Please install it.
--- failed re-building 'dobin.Rmd'

SUMMARY: processing the following file failed:
  'dobin.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/doBy.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/docdescriptR.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/docinfeR.Rcheck/00install.out' for details.
ppert: no visible global function definition for 'pbeta'
prepare8pkg: no visible global function definition for 'glob2rx'
qpert: no visible global function definition for 'qbeta'
rpert: no visible global function definition for 'rbeta'
Undefined global functions or variables:
  glob2rx pbeta qbeta rbeta
Consider adding
  importFrom("stats", "pbeta", "qbeta", "rbeta")
  importFrom("utils", "glob2rx")
to your NAMESPACE file.
Package vignette with placeholder title 'Vignette Title':
  'documenter.Rmd'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/docxtools.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/docxtractr.Rcheck/00install.out' for details.
installed size is  8.8Mb
  sub-directories of 1Mb or more:
    doc    5.2Mb
    libs   3.1Mb
GNU make is a SystemRequirements.
Running examples in 'dodgr-Ex.R' failed
The error most likely occurred in:

> ### Name: dodgr_to_tidygraph
> ### Title: dodgr_to_tidygraph
> ### Aliases: dodgr_to_tidygraph
> 
> ### ** Examples
> 
> graph <- weight_streetnet (hampi)
> grapht <- dodgr_to_tidygraph (graph)
Loading required namespace: tidygraph
Failed with error:  'DLL 'dplyr' not found: maybe not installed for this architecture?'
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: dodgr_to_tidygraph ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/doebioresearch.Rcheck/00install.out' for details.
Package which this enhances but not available for checking: 'gurobi'
dostats: no visible binding for global variable 'na.fail'
first: no visible global function definition for 'head'
last: no visible global function definition for 'tail'
pval.default: no visible global function definition for '.hasSlot'
pval.lm: no visible global function definition for 'anova'
Undefined global functions or variables:
  .hasSlot anova head na.fail tail
Consider adding
  importFrom("methods", ".hasSlot")
  importFrom("stats", "anova", "na.fail")
  importFrom("utils", "head", "tail")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Package vignette with placeholder title 'Vignette Title':
  'dotdot.Rmd'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dotwhisker.Rcheck/00install.out' for details.
installed size is  5.0Mb
  sub-directories of 1Mb or more:
    assets   2.9Mb
    doc      2.0Mb
Running examples in 'dplyrAssist-Ex.R' failed
The error most likely occurred in:

> ### Name: codes2kind
> ### Title: Differentiate the R code
> ### Aliases: codes2kind
> 
> ### ** Examples
> 
> require(tidyverse)
Loading required package: tidyverse
Error: package or namespace load failed for 'tidyverse' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
> temp <-c("iris %>% group_by(Species) %>% summarize_all(mean)","table1")
> codes2kind(temp)
Error in group_by(., Species) : could not find function "group_by"
Calls: codes2kind ... withVisible -> eval -> eval -> _fseq -> freduce -> <Anonymous>
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dplyr.teradata.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dragon.Rcheck/00install.out' for details.
DRaWR: no visible global function definition for 'write.table'
DRaWR: no visible global function definition for 'read.table'
DRaWR: no visible global function definition for 'aggregate'
DRaWR: no visible global function definition for 'slot'
Undefined global functions or variables:
  aggregate read.table slot write.table
Consider adding
  importFrom("methods", "slot")
  importFrom("stats", "aggregate")
  importFrom("utils", "read.table", "write.table")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
GNU make is a SystemRequirements.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/drifter.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/DriveML.Rcheck/00install.out' for details.
cdfDRM: no visible global function definition for 'tail'
densityDRM: no visible binding for global variable 'density'
drmdel: no visible binding for global variable 'optim'
drmdel: no visible global function definition for 'pchisq'
quantEst: no visible global function definition for 'tail'
quantileCompWald: no visible global function definition for 'pchisq'
quantileCompWald: no visible global function definition for 'p.adjust'
quantileDRM: no visible global function definition for 'tail'
quantileDRM: no visible global function definition for 'density'
Undefined global functions or variables:
  density optim p.adjust pchisq tail
Consider adding
  importFrom("stats", "density", "optim", "p.adjust", "pchisq")
  importFrom("utils", "tail")
to your NAMESPACE file.
compute_xsq: no visible global function definition for 'chisq.test'
Undefined global functions or variables:
  chisq.test
Consider adding
  importFrom("stats", "chisq.test")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/DSAIDE.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/DSAIRM.Rcheck/00install.out' for details.
BugReports field is not a suitable URL but appears to contain an email address
  not specified by mailto: nor contained in < >
   use the Contact field instead
DSBayes: no visible global function definition for 'qnorm'
DSBayes: no visible global function definition for 'coef'
DSBayes: no visible global function definition for 'vcov'
DSBayes : MLE: no visible global function definition for 'qnorm'
DSBayes: no visible global function definition for 'integrate'
DSBayes : qfunc.numer : <anonymous>: no visible global function
  definition for 'dnorm'
DSBayes : ds.numer: no visible global function definition for
  'integrate'
DSBayes : lower: no visible global function definition for 'qlogis'
DSBayes : lower: no visible global function definition for 'integrate'
DSBayes : upper: no visible global function definition for 'qlogis'
DSBayes : upper: no visible global function definition for 'integrate'
DSBayes: no visible global function definition for 'optimize'
DSBayes: no visible global function definition for 'uniroot'
Undefined global functions or variables:
  coef dnorm integrate optimize qlogis qnorm uniroot vcov
Consider adding
  importFrom("stats", "coef", "dnorm", "integrate", "optimize", "qlogis",
             "qnorm", "uniroot", "vcov")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dscore.Rcheck/00install.out' for details.
Running examples in 'dsm-Ex.R' failed
The error most likely occurred in:

> ### Name: obs_exp
> ### Title: Observed versus expected diagnostics for fitted DSMs
> ### Aliases: obs_exp
> 
> ### ** Examples
> 
> library(Distance)
Error: package or namespace load failed for 'Distance' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
AIC.dspat: no visible global function definition for 'coef'
LTDataFrame: no visible global function definition for 'as.formula'
coef.dspat: no visible global function definition for 'coef'
integrate.intensity: no visible global function definition for 'coef'
integrate.intensity: no visible global function definition for
  'predict'
integrate.intensity: no visible global function definition for
  'model.matrix'
integrate.intensity: no visible global function definition for 'vcov'
integrate.intensity: no visible global function definition for 'fitted'
lgcp.correction: no visible global function definition for 'predict'
lgcp.correction: no visible global function definition for
  'model.matrix'
lgcp.correction: no visible global function definition for 'fitted'
lgcp.correction: no visible global function definition for 'var'
lines_to_strips : line_to_strip: no visible global function definition
  for 'as'
owin.gpc.poly: no visible global function definition for 'as'
sample.points : sample.points.from.line: no visible global function
  definition for 'runif'
sample.points: no visible global function definition for 'model.matrix'
simCovariates: no visible global function definition for 'quantile'
simPts: no visible global function definition for 'model.matrix'
transect.intensity: no visible global function definition for 'predict'
transect.intensity: no visible global function definition for 'hist'
Undefined global functions or variables:
  as as.formula coef fitted hist model.matrix predict quantile runif
  var vcov
Consider adding
  importFrom("graphics", "hist")
  importFrom("methods", "as")
  importFrom("stats", "as.formula", "coef", "fitted", "model.matrix",
             "predict", "quantile", "runif", "var", "vcov")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/DSpoty.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/DSSAT.Rcheck/00install.out' for details.
NeedsCompilation field should likely be 'yes'
DStree: no visible global function definition for 'model.frame'
DStree: no visible global function definition for 'model.matrix'
DStree: no visible global function definition for 'model.response'
DStree: no visible global function definition for 'as.formula'
bag: no visible global function definition for 'model.frame'
bag: no visible global function definition for 'model.response'
plot.DStree: no visible global function definition for 'par'
plot.DStree: no visible global function definition for 'rainbow'
plot.DStree: no visible global function definition for 'lines'
plot.DStree: no visible global function definition for 'legend'
predict.DStree: no visible global function definition for 'predict'
print.DStree: no visible global function definition for 'naprint'
prune.DStree: no visible global function definition for 'median'
prune.DStree: no visible global function definition for 'predict'
prune.DStree: no visible binding for global variable 'var'
summ.MAE: no visible global function definition for 'predict'
summary.DStree: no visible global function definition for 'naprint'
Undefined global functions or variables:
  as.formula legend lines median model.frame model.matrix
  model.response naprint par predict rainbow var
Consider adding
  importFrom("grDevices", "rainbow")
  importFrom("graphics", "legend", "lines", "par")
  importFrom("stats", "as.formula", "median", "model.frame",
             "model.matrix", "model.response", "naprint", "predict",
             "var")
to your NAMESPACE file.
DCEA: no visible global function definition for 'p.adjust'
DS: no visible global function definition for 'p.adjust'
DS: no visible global function definition for 'pdf'
DS: no visible global function definition for 'dev.off'
LFC: no visible global function definition for 'glm'
LFC: no visible global function definition for 'predict'
PartialCor: no visible global function definition for 'na.omit'
comDCGLplot: no visible global function definition for 'pdf'
comDCGLplot: no visible global function definition for 'dev.off'
percentLinkfilter: no visible global function definition for 'cor'
qLinkfilter: no visible global function definition for 'cor'
qLinkfilter: no visible global function definition for 'pt'
qLinkfilter: no visible global function definition for 'p.adjust'
rLinkfilter: no visible global function definition for 'cor'
varianceBasedfilter: no visible binding for global variable 'var'
varianceBasedfilter: no visible global function definition for 'median'
varianceBasedfilter: no visible global function definition for 'pchisq'
Undefined global functions or variables:
  cor dev.off glm median na.omit p.adjust pchisq pdf predict pt var
Consider adding
  importFrom("grDevices", "dev.off", "pdf")
  importFrom("stats", "cor", "glm", "median", "na.omit", "p.adjust",
             "pchisq", "predict", "pt", "var")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/DTAT.Rcheck/00install.out' for details.
DLR: no visible global function definition for 'formula'
DLR: no visible global function definition for 'terms'
DLR: no visible global function definition for 'model.matrix'
DLR: no visible global function definition for 'as.formula'
DLR: no visible binding for global variable 'binomial'
DLR: no visible global function definition for 'coef'
DLR: no visible global function definition for 'pnorm'
DLR: no visible global function definition for 'qnorm'
acc.1test: no visible global function definition for 'qnorm'
pv.gs: no visible global function definition for 'pchisq'
pv.rpv: no visible global function definition for 'qnorm'
pv.rpv: no visible global function definition for 'pnorm'
pv.wgs: no visible global function definition for 'pchisq'
sesp.diff.ci: no visible global function definition for 'qnorm'
sesp.mcnemar: no visible global function definition for 'pchisq'
Undefined global functions or variables:
  as.formula binomial coef formula model.matrix pchisq pnorm qnorm
  terms
Consider adding
  importFrom("stats", "as.formula", "binomial", "coef", "formula",
             "model.matrix", "pchisq", "pnorm", "qnorm", "terms")
to your NAMESPACE file.
Package vignette with placeholder title 'Vignette Title':
  'vignette.Rmd'
DTK.plot: no visible global function definition for 'axis'
DTK.plot: no visible global function definition for 'title'
DTK.plot: no visible global function definition for 'lines'
DTK.plot: no visible global function definition for 'points'
DTK.test: no visible binding for global variable 'sd'
DTK.test: no visible global function definition for 'qtukey'
TK.test: no visible global function definition for 'TukeyHSD'
TK.test: no visible global function definition for 'aov'
Undefined global functions or variables:
  TukeyHSD aov axis lines points qtukey sd title
Consider adding
  importFrom("graphics", "axis", "lines", "points", "title")
  importFrom("stats", "TukeyHSD", "aov", "qtukey", "sd")
to your NAMESPACE file.
DTMC: no visible global function definition for 'runif'
Undefined global functions or variables:
  runif
Consider adding
  importFrom("stats", "runif")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dtplyr.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dtree.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/DTRreg.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dtwclust.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dtwSat.Rcheck/00install.out' for details.
Running examples in 'duawranglr-Ex.R' failed
The error most likely occurred in:

> ### Name: check_dua_restrictions
> ### Title: Check data frame columns against currently set restrictions
> ### Aliases: check_dua_restrictions
> 
> ### ** Examples
> 
> ## --------------
> ## Setup
> ## --------------
> ## set DUA crosswalk
> dua_cw <- system.file('extdata', 'dua_cw.csv', package = 'duawranglr')
> set_dua_cw(dua_cw)
-- duawranglr note -------------------------------------------------------------
DUA crosswalk has been set!
> ## read in data
> admin <- system.file('extdata', 'admin_data.csv', package = 'duawranglr')
> df <- read_dua_file(admin)
> ## --------------
> 
> ## set restriction level
> set_dua_level('level_iii')
> 
> ## show restrictions
> see_dua_level(show_restrictions = TRUE)
--------------------------------------------------------------------------------
You have set restrictions at [ level_iii ]
--------------------------------------------------------------------------------

RESTRICTED VARIABLE NAMES:

 - sid
 - sname
 - tname
 
--------------------------------------------------------------------------------
> 
> ## see variables in administrative data file
> names(df)
 [1] "sid"     "sname"   "dob"     "gender"  "raceeth" "tid"     "tname"  
 [8] "zip"     "mathscr" "readscr"
> 
> ## remove restrictive variables
> df <- dplyr::select(df, -c(sid,sname,tname))
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: :: ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'duawranglr.Rmd' using rmarkdown
--- finished re-building 'duawranglr.Rmd'

--- re-building 'securing_data.Rmd' using rmarkdown
Quitting from lines 98-104 (securing_data.Rmd) 
Error: processing vignette 'securing_data.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'securing_data.Rmd'

SUMMARY: processing the following file failed:
  'securing_data.Rmd'

Error: Vignette re-building failed.
Execution halted
File
  LICENSE
is not mentioned in the DESCRIPTION file.
dummy: no visible global function definition for 'model.matrix'
dummy: no visible global function definition for 'model.frame'
Undefined global functions or variables:
  model.frame model.matrix
Consider adding
  importFrom("stats", "model.frame", "model.matrix")
to your NAMESPACE file.
cvSDDT: no visible global function definition for 'qt'
cvSDDT : Cj_SD.fun: no visible global function definition for 'combn'
cvSDDT: no visible global function definition for 'uniroot'
cvSUDT: no visible global function definition for 'rnorm'
cvSUDT: no visible global function definition for 'rchisq'
cvSUDT : psi.fun: no visible global function definition for 'pnorm'
cvSUDT: no visible global function definition for 'qt'
cvSUDT: no visible global function definition for 'uniroot'
cvSUDT: no visible global function definition for 'combn'
nvDT : samplesize: no visible global function definition for 'rnorm'
nvDT : samplesize: no visible global function definition for 'rchisq'
nvDT : samplesize: no visible global function definition for 'pnorm'
nvDT : ssBonf: no visible global function definition for 'qnorm'
nvDT : ssBonf: no visible global function definition for 'qt'
nvDT : ssBonf: no visible global function definition for 'rnorm'
nvDT : ssBonf: no visible global function definition for 'rchisq'
nvDT : ssBonf: no visible global function definition for 'pnorm'
nvDT: no visible global function definition for 'uniroot'
powDT: no visible global function definition for 'rnorm'
powDT: no visible global function definition for 'rchisq'
powDT: no visible global function definition for 'pnorm'
qvSDDT: no visible global function definition for 'pt'
qvSUDT: no visible global function definition for 'rnorm'
qvSUDT: no visible global function definition for 'rchisq'
qvSUDT : psi.fun: no visible global function definition for 'pnorm'
qvSUDT: no visible global function definition for 'pt'
qvSUDT : Pj.fun: no visible global function definition for 'qt'
qvSUDT : Pj.fun: no visible global function definition for 'uniroot'
Undefined global functions or variables:
  combn pnorm pt qnorm qt rchisq rnorm uniroot
Consider adding
  importFrom("stats", "pnorm", "pt", "qnorm", "qt", "rchisq", "rnorm",
             "uniroot")
  importFrom("utils", "combn")
to your NAMESPACE file.
Clough: no visible global function definition for 'dgamma'
computePosterior,Counts: no visible global function definition for
  'dnbinom'
getPosteriorParam,Counts: no visible global function definition for
  'qgamma'
getPosteriorParam,Counts: no visible global function definition for
  'dgamma'
getPosteriorParam,Counts: no visible global function definition for
  'pgamma'
plotPosterior,Counts: no visible global function definition for 'axis'
plotPosterior,Counts: no visible global function definition for
  'abline'
plotPosterior,Counts: no visible global function definition for 'lines'
plotPosterior,Counts: no visible global function definition for 'rect'
plotPosterior,Counts: no visible global function definition for 'curve'
plotPosterior,Counts: no visible global function definition for
  'dgamma'
plotPosterior,Counts: no visible global function definition for
  'legend'
show,Counts: no visible global function definition for 'head'
show,Counts: no visible global function definition for 'tail'
Undefined global functions or variables:
  abline axis curve dgamma dnbinom head legend lines pgamma qgamma rect
  tail
Consider adding
  importFrom("graphics", "abline", "axis", "curve", "legend", "lines",
             "rect")
  importFrom("stats", "dgamma", "dnbinom", "pgamma", "qgamma")
  importFrom("utils", "head", "tail")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dupree.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dvmisc.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
'library' or 'require' calls to packages already attached by Depends:
  'ggm' 'tcltk'
  Please remove these calls from your code.
Packages in Depends field not imported from:
  'ggm' 'tcltk'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
installed size is 11.7Mb
  sub-directories of 1Mb or more:
    data   4.2Mb
    doc    1.7Mb
    libs   5.4Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/DynaRankR.Rcheck/00install.out' for details.
MultiTestH0 : MultiTestOneColumn: no visible global function definition
  for 'pchisq'
RunClustering : CheckClusterNew: no visible global function definition
  for 'qchisq'
RunClustering: no visible global function definition for 'qchisq'
RunDenoising: no visible binding for global variable 'var'
RunDenoising: no visible global function definition for 'qchisq'
RunDenoising: no visible binding for global variable 'median'
RunDenoising: no visible global function definition for 'var'
RunDenoising : buildEstimate: no visible global function definition for
  'qchisq'
Undefined global functions or variables:
  median pchisq qchisq var
Consider adding
  importFrom("stats", "median", "pchisq", "qchisq", "var")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dyndimred.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dynfrail.Rcheck/00install.out' for details.
GetIntMod: no visible global function definition for 'arima'
GetLikeDI: no visible global function definition for 'arima'
GetLikeDI: no visible global function definition for 'logLik'
GetPV: no visible global function definition for 'optimize'
GetPV: no visible global function definition for 'pchisq'
fitdi: no visible global function definition for 'optimize'
Undefined global functions or variables:
  arima logLik optimize pchisq
Consider adding
  importFrom("stats", "arima", "logLik", "optimize", "pchisq")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/DynNom.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dynparam.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dynRB.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dynr.Rcheck/00install.out' for details.
Running examples in 'dynsim-Ex.R' failed
The error most likely occurred in:

> ### Name: dynsim
> ### Title: Dynamic simulations of autoregressive relationships
> ### Aliases: dynsim
> 
> ### ** Examples
> 
> # Load package
> library(DataCombine)
Error: package or namespace load failed for 'DataCombine' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Error(s) in re-building vignettes:
--- re-building 'dynsim-overview.Rnw' using knitr
Quitting from lines 159-163 (dynsim-overview.Rnw) 
Error: processing vignette 'dynsim-overview.Rnw' failed with diagnostics:
package or namespace load failed for 'DataCombine' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'dynsim-overview.Rnw'

SUMMARY: processing the following file failed:
  'dynsim-overview.Rnw'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dynutils.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/dynwrap.Rcheck/00install.out' for details.
installed size is 10.3Mb
  sub-directories of 1Mb or more:
    data  10.3Mb
installed size is  6.1Mb
  sub-directories of 1Mb or more:
    data   3.9Mb
    libs   2.1Mb
Running examples in 'E4tools-Ex.R' failed
The error most likely occurred in:

> ### Name: E4.Acc_Process.part2.Filter_ConvertAcc
> ### Title: Accelerometer Processing Part 2: Extract and filter
> ###   accelerometer data This function will allow you to filter
> ###   acceleromter data (based on the EDA signal) and add metrics like g
> ###   and the normalized Euclidian distance from origin vector.
> ### Aliases: E4.Acc_Process.part2.Filter_ConvertAcc
> ### Keywords: EDA
> 
> ### ** Examples
> 
> E4.Acc_Process.part2.Filter_ConvertAcc(participant_list=c(1001),
+                                        rdslocation.EDA=paste(system.file(package="E4tools"),
+                                        "/extdata/output/raw_EDA/",sep=""),
+                                        rdslocation.acc=paste(system.file(package="E4tools"),
+                                        "/extdata/output/raw_acc/",sep=""),
+                                        rdslocation.acc_filtered=paste(tempdir(),
+                                        "/extdata/output/filtered_acc/",sep=""))
Starting participant 1001
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: E4.Acc_Process.part2.Filter_ConvertAcc ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
installed size is  9.5Mb
  sub-directories of 1Mb or more:
    bin       6.1Mb
    extdata   2.9Mb
GNU make is a SystemRequirements.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/eAnalytics.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/easyalluvial.Rcheck/00install.out' for details.
Packages in Depends field not imported from:
  'base64enc' 'knitr' 'markdown'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
.file_attachment: no visible global function definition for
  'base64encode'
.plot_attachment: no visible global function definition for 'dev.off'
.update_list: no visible global function definition for 'modifyList'
easyHtmlReport: no visible global function definition for 'knit'
easyHtmlReport: no visible global function definition for
  'markdownToHTML'
mime_part.data.frame: no visible global function definition for
  'write.table'
mime_part.ggplot: no visible binding for global variable 'pdf'
mime_part.matrix: no visible global function definition for
  'write.table'
mime_part.trellis: no visible binding for global variable 'pdf'
simpleHtmlReport : <anonymous>: no visible global function definition
  for 'write.table'
Undefined global functions or variables:
  base64encode dev.off knit markdownToHTML modifyList pdf write.table
Consider adding
  importFrom("grDevices", "dev.off", "pdf")
  importFrom("utils", "modifyList", "write.table")
to your NAMESPACE file.
Malformed Title field: should not end in a period.
MARK.MCMC : Model.Creator: no visible global function definition for
  'combn'
MARK.MCMC : formula.Maker: no visible global function definition for
  'combn'
Simulate.CH: no visible global function definition for 'rnorm'
Simulate.CH: no visible global function definition for 'rbinom'
Undefined global functions or variables:
  combn rbinom rnorm
Consider adding
  importFrom("stats", "rbinom", "rnorm")
  importFrom("utils", "combn")
to your NAMESPACE file.
Running examples in 'easyr-Ex.R' failed
The error most likely occurred in:

> ### Name: bindf
> ### Title: Bind Rows with Factors
> ### Aliases: bindf
> 
> ### ** Examples
> 
> 
> # create data where factors have different levels.
> df1 = data.frame(
+   factor1 = c( 'a', 'b', 'c' ),
+   factor2 = c( 'high', 'medium', 'low' ),
+   factor.join = c( '0349038u093843', '304359867893753', '3409783509735' ),
+   numeric = c( 1, 2, 3 ),
+   logical = c( TRUE, TRUE, TRUE )
+ )#' 
> df2 = data.frame(
+   factor1 = c( 'd', 'e', 'f' ),
+   factor2 = c( 'low', 'medium', 'high' ),
+   factor.join = c( '32532532536', '304359867893753', '32534745876' ),
+   numeric = c( 4, 5, 6 ),
+   logical = c( FALSE, FALSE, FALSE )
+ )
> 
> # bindf preserves factors but combines levels.
> # factor-friendly functions default to ordered levels.
> str( df1 )
'data.frame':	3 obs. of  5 variables:
 $ factor1    : chr  "a" "b" "c"
 $ factor2    : chr  "high" "medium" "low"
 $ factor.join: chr  "0349038u093843" "304359867893753" "3409783509735"
 $ numeric    : num  1 2 3
 $ logical    : logi  TRUE TRUE TRUE
> str( bindf( df1, df2 ) )
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: str ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
eb: no visible global function definition for 'optimize'
ebalance: no visible global function definition for 'var'
Undefined global functions or variables:
  optimize var
Consider adding
  importFrom("stats", "optimize", "var")
to your NAMESPACE file.
Package vignette with placeholder title 'Vignette Title':
  'my-vignette.Rmd'
Error(s) in re-building vignettes:
--- re-building 'ebayesthresh.Rmd' using rmarkdown
Quitting from lines 25-28 (ebayesthresh.Rmd) 
Error: processing vignette 'ebayesthresh.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'ebayesthresh.Rmd'

SUMMARY: processing the following file failed:
  'ebayesthresh.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'ebirdst-Ex.R' failed
The error most likely occurred in:

> ### Name: compute_ppms
> ### Title: Computes the Predictive Performance Metrics for a spatiotemporal
> ###   extent
> ### Aliases: compute_ppms
> 
> ### ** Examples
> 
> # download and load example data
> sp_path <- ebirdst_download("example_data", tifs_only = FALSE)
Data already exists, use force = TRUE to re-download.
> 
> # define a spatiotemporal extent to plot
> bb_vec <- c(xmin = -86, xmax = -83, ymin = 42.5, ymax = 44.5)
> e <- ebirdst_extent(bb_vec, t = c("05-01", "05-31"))
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: ebirdst_extent ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
ebSNP: no visible global function definition for 'optim'
Undefined global functions or variables:
  optim
Consider adding
  importFrom("stats", "optim")
to your NAMESPACE file.
Error(s) in re-building vignettes:
--- re-building 'ecb_sdw.Rmd' using rmarkdown
Quitting from lines 150-157 (ecb_sdw.Rmd) 
Error: processing vignette 'ecb_sdw.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'ecb_sdw.Rmd'

SUMMARY: processing the following file failed:
  'ecb_sdw.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/echarts4r.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/echor.Rcheck/00install.out' for details.
Running examples in 'eclust-Ex.R' failed
The error most likely occurred in:

> ### Name: r_cluster_data
> ### Title: Cluster data using environmental exposure
> ### Aliases: r_cluster_data
> 
> ### ** Examples
> 
> data("tcgaov")
> tcgaov[1:5,1:6, with = FALSE]
             rn subtype E status   OS    ABCA8
1: TCGA-04-1331       4 1      1 1336 3.684824
2: TCGA-04-1332       1 0      1 1247 7.892982
3: TCGA-04-1335       3 1      1   55 5.193188
4: TCGA-04-1336       3 1      0 1495 3.055437
5: TCGA-04-1337       1 0      1   61 3.149427
> Y <- log(tcgaov[["OS"]])
> E <- tcgaov[["E"]]
> genes <- as.matrix(tcgaov[,-c("OS","rn","subtype","E","status"),with = FALSE])
> trainIndex <- drop(caret::createDataPartition(Y, p = 0.5, list = FALSE, times = 1))
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: drop ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'eclust.Rmd' using rmarkdown
See example usage at http://sahirbhatnagar.com/eclust/
Quitting from lines 117-134 (eclust.Rmd) 
Error: processing vignette 'eclust.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'eclust.Rmd'

SUMMARY: processing the following file failed:
  'eclust.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/EcoGenetics.Rcheck/00install.out' for details.
dilution: no visible global function definition for 'grey'
dilution: no visible global function definition for 'lines'
dilution: no visible global function definition for 'rect'
dilution: no visible global function definition for 'segments'
dilution: no visible global function definition for 'text'
dilution: no visible global function definition for 'arrows'
pricefit: no visible global function definition for 'runif'
Undefined global functions or variables:
  arrows grey lines rect runif segments text
Consider adding
  importFrom("grDevices", "grey")
  importFrom("graphics", "arrows", "lines", "rect", "segments", "text")
  importFrom("stats", "runif")
to your NAMESPACE file.
Error(s) in re-building vignettes:
--- re-building 'basic-usage.Rmd' using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
   [[ suppressing 785 column names '0011', '0012', '0013' ... ]]
   [[ suppressing 785 column names '0011', '0012', '0013' ... ]]

Attaching package: 'igraph'

The following objects are masked from 'package:stats':

    decompose, spectrum

The following object is masked from 'package:base':

    union

computing product projection...
--------------------------------------------------
0 threshold...
0.05 threshold...
0.1 threshold...
0.15 threshold...
0.2 threshold...
0.25 threshold...
0.3 threshold...
0.35 threshold...
0.4 threshold...
0.45 threshold achieves the avg number of connections
computing product projection...
--------------------------------------------------
0 threshold...
0.05 threshold...
0.1 threshold...
0.15 threshold...
0.2 threshold...
0.25 threshold...
0.3 threshold...
0.35 threshold...
0.4 threshold...
0.45 threshold...
0.5 threshold...
0.55 threshold achieves the avg number of connections
Loading required package: ggplot2
Quitting from lines 122-144 (basic-usage.Rmd) 
Error: processing vignette 'basic-usage.Rmd' failed with diagnostics:
package or namespace load failed for 'ggraph' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'basic-usage.Rmd'

SUMMARY: processing the following file failed:
  'basic-usage.Rmd'

Error: Vignette re-building failed.
Execution halted
GNU make is a SystemRequirements.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ecospat.Rcheck/00install.out' for details.
plot.ETdiagnosis: no visible global function definition for 'par'
plot.ETdiagnosis: no visible global function definition for 'lines'
plot.ETdiagnosis: no visible global function definition for 'legend'
plot.ETmain: no visible global function definition for 'par'
plot.ETmain: no visible global function definition for 'polygon'
plot.ETmain: no visible global function definition for 'axis'
plot.ETmain: no visible global function definition for 'legend'
plot.ETmain: no visible global function definition for 'lines'
plot.Transpose: no visible global function definition for 'par'
plot.Transpose: no visible global function definition for 'polygon'
plot.Transpose: no visible global function definition for 'axis'
plot.Transpose: no visible global function definition for 'legend'
plot.smooth: no visible global function definition for 'lines'
plot_ETdiagnosis_isopleth: no visible global function definition for
  'par'
plot_ETdiagnosis_isopleth: no visible global function definition for
  'rainbow'
plot_ETdiagnosis_isopleth: no visible global function definition for
  'filled.contour'
regPB: no visible global function definition for 'coef'
regPB: no visible global function definition for 'lm'
regPB.ac: no visible global function definition for 'coef'
regPB.ac: no visible global function definition for 'lm'
regPB.ctsa: no visible global function definition for 'coef'
regPB.ctsa: no visible global function definition for 'lm'
Undefined global functions or variables:
  axis coef filled.contour legend lines lm par polygon rainbow
Consider adding
  importFrom("grDevices", "rainbow")
  importFrom("graphics", "axis", "filled.contour", "legend", "lines",
             "par", "polygon")
  importFrom("stats", "coef", "lm")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ecr.Rcheck/00install.out' for details.
Running examples in 'ectotemp-Ex.R' failed
The error most likely occurred in:

> ### Name: bootstrap_E
> ### Title: Bootstrap thermoregulation effectiveness
> ### Aliases: bootstrap_E
> 
> ### ** Examples
> 
> te <- na.omit(bufbuf[,"te"])
> tb <- na.omit(bufbuf[,"tb"])
> E_bootstrapped <- bootstrap_E(te, tb,
+                              19.35, 26.44,
+                              'hertz',
+                              1000)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: bootstrap_E ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/eda4treeR.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/edbuildmapr.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/edbuildr.Rcheck/00install.out' for details.
Package in Depends field not imported from: 'spc'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Error(s) in re-building vignettes:
--- re-building 'eddington.Rmd' using rmarkdown
Quitting from lines 16-26 (eddington.Rmd) 
Error: processing vignette 'eddington.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'eddington.Rmd'

SUMMARY: processing the following file failed:
  'eddington.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/edeaR.Rcheck/00install.out' for details.
UCexactTest: no visible global function definition for 'is'
UCexactTest: no visible global function definition for 'new'
pvalue: no visible global function definition for 'dnbinom'
pvalue: no visible global function definition for 'pnbinom'
sup.mu: no visible global function definition for 'predict'
Undefined global functions or variables:
  dnbinom is new pnbinom predict
Consider adding
  importFrom("methods", "is", "new")
  importFrom("stats", "dnbinom", "pnbinom", "predict")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/educineq.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/edwards97.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/eechidna.Rcheck/00install.out' for details.
geteegdata: no visible global function definition for 'untar'
geteegdata: no visible global function definition for 'read.table'
geteegdata: no visible global function definition for 'write.csv'
geteegdata: no visible global function definition for 'write.table'
Undefined global functions or variables:
  read.table untar write.csv write.table
Consider adding
  importFrom("utils", "read.table", "untar", "write.csv", "write.table")
to your NAMESPACE file.
Running examples in 'eemR-Ex.R' failed
The error most likely occurred in:

> ### Name: eem_biological_index
> ### Title: Calculate the biological fluorescence index (BIX)
> ### Aliases: eem_biological_index
> 
> ### ** Examples
> 
> file <- system.file("extdata/cary/scans_day_1/", package = "eemR")
> eem <- eem_read(file, import_function = "cary")
> 
> eem_biological_index(eem)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: eem_biological_index ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Running 'testthat.R' [3s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(eemR)
  > 
  > test_check("eemR")
  Extracted sample(s): sample1 
  Extracted sample(s): sample1 
  Extracted sample(s): sample1 
  Extracted sample(s): sample1 
  -- 1. Error: Test Cobble's peaks (@test-metrics.R#7)  --------------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. eemR::eem_coble_peaks(eems, verbose = FALSE)
   2. dplyr::bind_rows
   3. base::getExportedValue(pkg, name)
   4. base::asNamespace(ns)
   5. base::getNamespace(ns)
   6. base::loadNamespace(name)
   7. base::library.dynam(lib, package, package.lib)
  
  -- 2. Error: Test fluorescence index (FI) (@test-metrics.R#23)  ----------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. eemR::eem_fluorescence_index(eems, verbose = FALSE)
   2. dplyr::bind_rows
   3. base::getExportedValue(pkg, name)
   4. base::asNamespace(ns)
   5. base::getNamespace(ns)
   6. base::loadNamespace(name)
   7. base::library.dynam(lib, package, package.lib)
  
  -- 3. Error: Test biological fluorescence index (BIX) (@test-metrics.R#31)  ----
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. eemR::eem_biological_index(eems, verbose = FALSE)
   2. dplyr::bind_rows
   3. base::getExportedValue(pkg, name)
   4. base::asNamespace(ns)
   5. base::getNamespace(ns)
   6. base::loadNamespace(name)
   7. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 4 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 3 ]
  1. Error: Test Cobble's peaks (@test-metrics.R#7) 
  2. Error: Test fluorescence index (FI) (@test-metrics.R#23) 
  3. Error: Test biological fluorescence index (BIX) (@test-metrics.R#31) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'custom-import-function.Rmd' using rmarkdown
Quitting from lines 53-92 (custom-import-function.Rmd) 
Error: processing vignette 'custom-import-function.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'custom-import-function.Rmd'

--- re-building 'introduction.Rmd' using rmarkdown
Quitting from lines 14-21 (introduction.Rmd) 
Error: processing vignette 'introduction.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'introduction.Rmd'

SUMMARY: processing the following files failed:
  'custom-import-function.Rmd' 'introduction.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/eesim.Rcheck/00install.out' for details.
Error(s) in re-building vignettes:
--- re-building 'EFAtools.Rmd' using rmarkdown

error: inv_sympd(): matrix is singular or not positive definite

error: inv_sympd(): matrix is singular or not positive definite

error: inv_sympd(): matrix is singular or not positive definite

error: inv_sympd(): matrix is singular or not positive definite
Quitting from lines 151-156 (EFAtools.Rmd) 
Error: processing vignette 'EFAtools.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'EFAtools.Rmd'

SUMMARY: processing the following file failed:
  'EFAtools.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/EFDR.Rcheck/00install.out' for details.
Malformed Title field: should not end in a period.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/efreadr.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/EGAnet.Rcheck/00install.out' for details.
Package suggested but not available for checking: 'eggCountsExtra'
installed size is 12.3Mb
  sub-directories of 1Mb or more:
    libs  11.6Mb
GNU make is a SystemRequirements.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/egor.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/EHR.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/EHRtemporalVariability.Rcheck/00install.out' for details.
Running 'testthat.R' [5s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(eia)
  > 
  > test_check("eia")
  -- 1. Error: (unknown) (@test-geoset.R#5)  -------------------------------------
  package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::library(dplyr)
   2. base::tryCatch(...)
   3. base:::tryCatchList(expr, classes, parentenv, handlers)
   4. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   5. value[[3L]](cond)
  
  -- 2. Failure: eia_report returns as expected (@test-reports.R#5)  -------------
  `x` inherits from `NULL` not `list`.
  
  -- 3. Failure: eia_report returns as expected (@test-reports.R#6)  -------------
  length(x) not equal to 2.
  1/1 mismatches
  [1] 0 - 2 == -2
  
  -- 4. Failure: eia_report returns as expected (@test-reports.R#7)  -------------
  names(x) not equal to c("data", "counties").
  target is NULL, current is character
  
  -- 5. Failure: eia_report returns as expected (@test-reports.R#10)  ------------
  names(x$data) not equal to `v`.
  target is NULL, current is character
  
  -- 6. Failure: eia_report returns as expected (@test-reports.R#12)  ------------
  names(x$counties) not equal to `v`.
  target is NULL, current is character
  
  == testthat results  ===========================================================
  [ OK: 32 | SKIPPED: 4 | WARNINGS: 0 | FAILED: 6 ]
  1. Error: (unknown) (@test-geoset.R#5) 
  2. Failure: eia_report returns as expected (@test-reports.R#5) 
  3. Failure: eia_report returns as expected (@test-reports.R#6) 
  4. Failure: eia_report returns as expected (@test-reports.R#7) 
  5. Failure: eia_report returns as expected (@test-reports.R#10) 
  6. Failure: eia_report returns as expected (@test-reports.R#12) 
  
  Error: testthat unit tests failed
  Execution halted
eiginv: no visible global function definition for 'runif'
Undefined global functions or variables:
  runif
Consider adding
  importFrom("stats", "runif")
to your NAMESPACE file.
boot_pr_comp: no visible global function definition for 'cov'
boot_pr_comp: no visible global function definition for 'quantile'
boot_pr_comp: no visible global function definition for 'segments'
boot_pr_comp: no visible global function definition for 'abline'
Undefined global functions or variables:
  abline cov quantile segments
Consider adding
  importFrom("graphics", "abline", "segments")
  importFrom("stats", "cov", "quantile")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
Packages in Depends field not imported from:
  'class' 'quantreg'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
cluster.segment: no visible global function definition for 'kmeans'
cluster.segment: no visible global function definition for 'knn'
comp.anc.dist: no visible global function definition for 'wilcox.test'
eila: no visible global function definition for 'hasArg'
get.prob.score: no visible global function definition for 'glm'
get.prob.score: no visible global function definition for 'binomial'
get.prob.score: no visible binding for global variable 'logit'
get.prob.score: no visible global function definition for 'predict'
quantreg.est: no visible global function definition for 'rnorm'
quantreg.est: no visible global function definition for 'rq.fit.fnb'
Undefined global functions or variables:
  binomial glm hasArg kmeans knn logit predict rnorm rq.fit.fnb
  wilcox.test
Consider adding
  importFrom("methods", "hasArg")
  importFrom("stats", "binomial", "glm", "kmeans", "predict", "rnorm",
             "wilcox.test")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/eixport.Rcheck/00install.out' for details.
Package suggested but not available for checking: 'lightgbm'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/EIX.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/elaborator.Rcheck/00install.out' for details.
Running examples in 'elasticIsing-Ex.R' failed
The error most likely occurred in:

> ### Name: elasticIsing
> ### Title: Estimate Ising model using elastic-net and cross-validation.
> ### Aliases: elasticIsing
> 
> ### ** Examples
> 
> library("IsingSampler")
Loading required package: Rcpp
Error: package or namespace load failed for 'IsingSampler' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Package in Depends field not imported from: 'elec'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
BaB: no visible binding for global variable 'calc.pairwise.e_p'
BaB: no visible global function definition for 'weight.function'
BaB: no visible global function definition for 'compute.stark.t'
LKPBound: no visible binding for global variable 'calc.pairwise.e_p'
LKPBound: no visible global function definition for 'weight.function'
LKPBound: no visible global function definition for 'compute.stark.t'
eqValBound: no visible binding for global variable 'calc.pairwise.e_p'
eqValBound: no visible global function definition for 'weight.function'
eqValBound: no visible global function definition for 'compute.stark.t'
getEbsMargin: no visible global function definition for 'is.elec.data'
getEbsMargin: no visible global function definition for
  'maximumMarginBound'
makeStratObj: no visible global function definition for 'is.elec.data'
makeStratObj: no visible global function definition for
  'maximumMarginBound'
strat.elec.data: no visible global function definition for 'elec.data'
takeOutZeroMMB: no visible global function definition for
  'maximumMarginBound'
withReplaceBound: no visible binding for global variable
  'calc.pairwise.e_p'
withReplaceBound: no visible global function definition for
  'weight.function'
withReplaceBound: no visible global function definition for
  'compute.stark.t'
Undefined global functions or variables:
  calc.pairwise.e_p compute.stark.t elec.data is.elec.data
  maximumMarginBound weight.function
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/electionsBR.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/electoral.Rcheck/00install.out' for details.
Running examples in 'EloOptimized-Ex.R' failed
The error most likely occurred in:

> ### Name: eloratingfixed
> ### Title: Create daily elo ranks and multiple derivatives with
> ###   user-defined parameter values
> ### Aliases: eloratingfixed
> 
> ### ** Examples
> 
> 
> nbadata = EloOptimized::nba #nba wins and losses from the 1995-96 season
> nbaelo = eloratingfixed(agon_data = nbadata)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: eloratingfixed ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Malformed Description field: should contain one or more complete sentences.
Package in Depends field not imported from: 'parallel'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Likelihood: no visible global function definition for
  'makePSOCKcluster'
Likelihood: no visible global function definition for 'clusterExport'
Likelihood: no visible global function definition for 'makeForkCluster'
Likelihood.first.run: no visible global function definition for
  'clusterApply'
Likelihood.next.runs: no visible global function definition for
  'clusterApply'
es.stopCluster: no visible global function definition for 'stopCluster'
plot.es.pedigree: no visible global function definition for 'hasArg'
Undefined global functions or variables:
  clusterApply clusterExport hasArg makeForkCluster makePSOCKcluster
  stopCluster
Consider adding
  importFrom("methods", "hasArg")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/EMA.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/EMAtools.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/emba.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/embed.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
Packages in Depends field not imported from:
  'MASS' 'mvtnorm'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Package vignette with placeholder title 'Vignette Title':
  'example.Rmd'
installed size is  6.1Mb
  sub-directories of 1Mb or more:
    data   2.0Mb
    libs   3.9Mb
installed size is 10.4Mb
  sub-directories of 1Mb or more:
    extdata  10.2Mb
Error(s) in re-building vignettes:
--- re-building 'tutorial.Rmd' using rmarkdown
Quitting from lines 129-130 (tutorial.Rmd) 
Error: processing vignette 'tutorial.Rmd' failed with diagnostics:
package or namespace load failed for 'rdflib' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'tutorial.Rmd'

SUMMARY: processing the following file failed:
  'tutorial.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/EML.Rcheck/00install.out' for details.
'library' or 'require' calls to packages already attached by Depends:
  'clusterSim' 'earth'
  Please remove these calls from your code.
Packages in Depends field not imported from:
  'clusterSim' 'earth'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
distance: no visible global function definition for
  'data.Normalization'
emmatn: no visible global function definition for 'runif'
estimateModel: no visible global function definition for 'as.formula'
estimateModel: no visible global function definition for 'earth'
estimateModel: no visible global function definition for 'plotmo'
estimateModel: no visible global function definition for 'predict'
mutation: no visible global function definition for 'runif'
plot.emma: no visible global function definition for 'colorRampPalette'
plot.emma: no visible global function definition for 'par'
plot.emma: no visible global function definition for 'persp'
plot.emma: no visible global function definition for 'points'
plot.emma: no visible global function definition for 'trans3d'
Undefined global functions or variables:
  as.formula colorRampPalette data.Normalization earth par persp plotmo
  points predict runif trans3d
Consider adding
  importFrom("grDevices", "colorRampPalette", "trans3d")
  importFrom("graphics", "par", "persp", "points")
  importFrom("stats", "as.formula", "predict", "runif")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
'library' or 'require' call to 'reshape' which was already attached by Depends.
  Please remove these calls from your code.
Package in Depends field not imported from: 'reshape'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
MFFetch: no visible global function definition for 'melt'
Undefined global functions or variables:
  melt
installed size is  5.2Mb
  sub-directories of 1Mb or more:
    data   2.0Mb
    libs   2.5Mb
installed size is  7.0Mb
  sub-directories of 1Mb or more:
    emoji_fonts   6.4Mb
empiricalFDR: no visible global function definition for 'axis'
empiricalFDR: no visible global function definition for 'loess'
empiricalFDR: no visible global function definition for 'predict'
empiricalFDR: no visible global function definition for 'lines'
empiricalFDR: no visible global function definition for 'abline'
fdrBiCurve: no visible global function definition for 'axis'
fdrBiCurve: no visible global function definition for 'lines'
fdrBiCurve: no visible global function definition for 'abline'
fdrBiCurve: no visible global function definition for 'legend'
simulateCounts: no visible global function definition for
  'txtProgressBar'
simulateCounts: no visible global function definition for
  'setTxtProgressBar'
simulateCounts: no visible global function definition for 'rnorm'
simulateCounts: no visible global function definition for 'hist'
simulateCounts: no visible global function definition for 'colData'
Undefined global functions or variables:
  abline axis colData hist legend lines loess predict rnorm
  setTxtProgressBar txtProgressBar
Consider adding
  importFrom("graphics", "abline", "axis", "hist", "legend", "lines")
  importFrom("stats", "loess", "predict", "rnorm")
  importFrom("utils", "setTxtProgressBar", "txtProgressBar")
to your NAMESPACE file.
ExactMultinomialTest: no visible global function definition for
  'dmultinom'
ExactMultinomialTest : <anonymous>: no visible global function
  definition for 'dmultinom'
ExactMultinomialTestChisquare : <anonymous>: no visible global function
  definition for 'dmultinom'
MonteCarloMultinomialTest: no visible global function definition for
  'rmultinom'
MonteCarloMultinomialTest: no visible global function definition for
  'flush.console'
MonteCarloMultinomialTestChisquare: no visible global function
  definition for 'rmultinom'
MonteCarloMultinomialTestChisquare: no visible global function
  definition for 'flush.console'
multinomial.test: no visible global function definition for
  'flush.console'
plotMultinom: no visible global function definition for 'barplot'
plotMultinom: no visible global function definition for 'mtext'
Undefined global functions or variables:
  barplot dmultinom flush.console mtext rmultinom
Consider adding
  importFrom("graphics", "barplot", "mtext")
  importFrom("stats", "dmultinom", "rmultinom")
  importFrom("utils", "flush.console")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/eNchange.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/encryptr.Rcheck/00install.out' for details.
Running examples in 'engsoccerdata-Ex.R' failed
The error most likely occurred in:

> ### Name: alltimerecord
> ### Title: Get a team's all-time record
> ### Aliases: alltimerecord
> 
> ### ** Examples
> 
> alltimerecord(england, "Aston Villa")
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: alltimerecord ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'ENMeval-vignette.Rmd' using rmarkdown
Loading required package: spocc
Error: package or namespace load failed for 'spocc' in inDL(x, as.logical(local), as.logical(now), ...):
 unable to load shared object 'D:/temp/RtmpuQgod8/RLIBS_290d8d9e257c/dplyr/libs/x64/dplyr.dll':
  LoadLibrary failure:  Das angegebene Modul wurde nicht gefunden.

Installing package into 'D:/temp/RtmpuQgod8/RLIBS_290d8d9e257c'
(as 'lib' is unspecified)
trying URL 'http://cran.us.r-project.org/bin/windows/contrib/4.0/spocc_1.1.0.zip'
Content type 'application/zip' length 358367 bytes (349 KB)
==================================================
downloaded 349 KB

Warning: cannot remove prior installation of package 'spocc'
Warning: restored 'spocc'
Loading required package: ENMeval
Loading required package: dismo
Loading required package: raster
Loading required package: sp
Quitting from lines 38-53 (ENMeval-vignette.Rmd) 
Error: processing vignette 'ENMeval-vignette.Rmd' failed with diagnostics:
package or namespace load failed for 'spocc' in inDL(x, as.logical(local), as.logical(now), ...):
 unable to load shared object 'D:/temp/RtmpuQgod8/RLIBS_290d8d9e257c/dplyr/libs/x64/dplyr.dll':
  LoadLibrary failure:  Das angegebene Modul wurde nicht gefunden.

--- failed re-building 'ENMeval-vignette.Rmd'

SUMMARY: processing the following file failed:
  'ENMeval-vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/enpls.Rcheck/00install.out' for details.
Running examples in 'ensembleR-Ex.R' failed
The error most likely occurred in:

> ### Name: ensemble
> ### Title: Perform Ensemble modelling using Caret Package.
> ### Aliases: ensemble
> 
> ### ** Examples
> 
> data(iris)
> preds <- ensemble(iris[1:125,],iris[125:150,],'Species',c('treebag','rpart'),'rpart')
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: ensemble ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Running examples in 'entropart-Ex.R' failed
The error most likely occurred in:

> ### Name: DivProfile
> ### Title: Diversity Profile of a metacommunity
> ### Aliases: DivProfile is.DivProfile plot.DivProfile autoplot.DivProfile
> ###   summary.DivProfile
> 
> ### ** Examples
> 
> # Load Paracou data (number of trees per species in two 1-ha plot of a tropical forest)
> data(Paracou618)
> # Estimate diversity.
> Profile <- DivProfile(q.seq = seq(0, 2, 0.1), Paracou618.MC, Biased = FALSE)
> plot(Profile)
> autoplot(Profile)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: autoplot ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'entropart.Rmd' using rmarkdown
Quitting from lines 212-214 (entropart.Rmd) 
Error: processing vignette 'entropart.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'entropart.Rmd'

SUMMARY: processing the following file failed:
  'entropart.Rmd'

Error: Vignette re-building failed.
Execution halted
diffcv: no visible global function definition for 'sd'
diffcvall: no visible global function definition for 'sd'
diffcvall: no visible global function definition for 'fligner.test'
diffcvall: no visible global function definition for 'p.adjust'
diffcvpFK: no visible global function definition for 'fligner.test'
diffcvpFK: no visible global function definition for 'p.adjust'
diffexp: no visible global function definition for 'var'
diffexp: no visible global function definition for 't.test'
diffexp: no visible global function definition for 'p.adjust'
diffexp2: no visible global function definition for 'var'
diffexp2: no visible global function definition for 't.test'
diffexp2: no visible global function definition for 'p.adjust'
diffnsepperm: no visible global function definition for 'p.adjust'
diffseall: no visible global function definition for 'p.adjust'
Undefined global functions or variables:
  fligner.test p.adjust sd t.test var
Consider adding
  importFrom("stats", "fligner.test", "p.adjust", "sd", "t.test", "var")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/entrymodels.Rcheck/00install.out' for details.
installed size is  9.7Mb
  sub-directories of 1Mb or more:
    R      2.3Mb
    doc    3.3Mb
    help   3.4Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/eoffice.Rcheck/00install.out' for details.
'library' or 'require' call to 'plotrix' which was already attached by Depends.
  Please remove these calls from your code.
'library' or 'require' calls in package code:
  'Hmisc' 'survival'
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Package in Depends field not imported from: 'plotrix'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
There are ::: calls to the package's namespace in its code. A package
  almost never needs to use ::: for its own objects:
  'a.alpha.ade' 'a.coladd.ade' 'a.getcol.ade' 'a.glc'
Error(s) in re-building vignettes:
--- re-building 'epca.Rmd' using knitr
Quitting from lines 13-19 (epca.Rmd) 
Error: processing vignette 'epca.Rmd' failed with diagnostics:
package or namespace load failed for 'tidyverse' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'epca.Rmd'

SUMMARY: processing the following file failed:
  'epca.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'eph-Ex.R' failed
The error most likely occurred in:

> ### Name: calculate_poverty
> ### Title: Calculo de Pobreza e Indigencia
> ### Aliases: calculate_poverty
> 
> ### ** Examples
> 
> 
> bases <- dplyr::bind_rows(toybase_individual_2016_03,
+                           toybase_individual_2016_04)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: :: ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'eph.Rmd' using rmarkdown
Quitting from lines 48-53 (eph.Rmd) 
Error: processing vignette 'eph.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'eph.Rmd'

--- re-building 'estimacion_pobreza.Rmd' using rmarkdown
--- finished re-building 'estimacion_pobreza.Rmd'

SUMMARY: processing the following file failed:
  'eph.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'epicontacts-Ex.R' failed
The error most likely occurred in:

> ### Name: as.igraph.epicontacts
> ### Title: Create igraph object from contact data
> ### Aliases: as.igraph.epicontacts
> 
> ### ** Examples
> 
> 
> if (require(outbreaks) && require(igraph)) {
+ ## build data
+ 
+ x <- make_epicontacts(ebola_sim$linelist, ebola_sim$contacts,
+                       id = "case_id", to = "case_id", from ="infector",
+                       directed = TRUE)
+ 
+ 
+ ## subset data - keep 50 cases from linelist with contacts
+ 
+ ids <- get_id(x, "common")[1:50]
+ ids
+ x <- x[ids, ids]
+ 
+ 
+ ## make igraph object with associated attributes from epicontacts object
+ 
+ net <- as.igraph(x)
+ net
+ plot(net, vertex.label = "", vertex.size = 10,
+      vertex.color = cases_pal(50))
+ }
Loading required package: outbreaks
Loading required package: igraph

Attaching package: 'igraph'

The following objects are masked from 'package:stats':

    decompose, spectrum

The following object is masked from 'package:base':

    union

Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: as.igraph ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'epicontacts.Rmd' using rmarkdown
Quitting from lines 118-120 (epicontacts.Rmd) 
Error: processing vignette 'epicontacts.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'epicontacts.Rmd'

--- re-building 'epicontacts_class.Rmd' using rmarkdown
Quitting from lines 109-110 (epicontacts_class.Rmd) 
Error: processing vignette 'epicontacts_class.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'epicontacts_class.Rmd'

SUMMARY: processing the following files failed:
  'epicontacts.Rmd' 'epicontacts_class.Rmd'

Error: Vignette re-building failed.
Execution halted
Package suggested but not available for checking: 'epidict'
Running examples in 'epikit-Ex.R' failed
The error most likely occurred in:

> ### Name: attack_rate
> ### Title: Rates and Ratios
> ### Aliases: attack_rate case_fatality_rate case_fatality_rate_df
> ###   mortality_rate
> 
> ### ** Examples
> 
> # Attack rates can be calculated with just two numbers
> print(ar <- attack_rate(10, 50), digits = 4) # 20% attack rate
  cases population ar lower upper
1    10         50 20 11.24 33.04
> 
> # print them inline using `fmt_ci_df()`
> fmt_ci_df(ar)
[1] "20.00% (CI 11.24--33.04)"
> 
> # Alternatively, if you want one column for the CI, use `mergeCI = TRUE`
> attack_rate(10, 50, mergeCI = TRUE, digits = 2) # 20% attack rate
  cases population ar             ci
1    10         50 20 (11.24--33.04)
> 
> print(cfr <- case_fatality_rate(1, 100), digits = 2) # CFR of 1%
  deaths population cfr lower upper
1      1        100   1  0.18   5.4
> fmt_ci_df(cfr)
[1] "1.00% (CI 0.18--5.45)"
> 
> # using a data frame
> if (require("outbreaks")) {
+   withAutoprint({
+   e <- outbreaks::ebola_sim$linelist
+   case_fatality_rate_df(e,
+     outcome == "Death",
+     group = gender,
+     add_total = TRUE,
+     mergeCI = TRUE
+   )
+   })
+ }
Loading required package: outbreaks
> e <- outbreaks::ebola_sim$linelist
> case_fatality_rate_df(e, outcome == "Death", group = gender, add_total = TRUE, 
+     mergeCI = TRUE)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: withAutoprint ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'intro.Rmd' using rmarkdown
Loading required namespace: outbreaks
Quitting from lines 109-116 (./../man/rmdhunks/introduction.Rmd) 
Quitting from lines 34-36 (./../man/rmdhunks/introduction.Rmd) 
Error: processing vignette 'intro.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'intro.Rmd'

SUMMARY: processing the following file failed:
  'intro.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/EpiModel.Rcheck/00install.out' for details.
Running examples in 'epiphy-Ex.R' failed
The error most likely occurred in:

> ### Name: smle
> ### Title: Simple maximum likelihood estimation
> ### Aliases: smle smle.default smle.intensity
> ### Keywords: internal
> 
> ### ** Examples
> 
> set.seed(12345)
> data <- rlogis(100, location = 5, scale = 2)
> ll_logis <- function(data, param = c(location = 0, scale = 1)) {
+     sum(dlogis(x = data, location = param[["location"]],
+                scale = param[["scale"]], log = TRUE))
+ }
> res <- smle(data, ll_logis)
> res
location: 5.111 (± 0.3764)
scale: 2.179 (± 0.183)
> summary(res)
Maximum likelihood estimation

Call:
smle.default(data = data, f = ll_logis)

Coefficients:
         Estimate Std.Err Z value    Pr(>z)    
location  5.11143 0.37642  13.579 < 2.2e-16 ***
scale     2.17878 0.18297  11.908 < 2.2e-16 ***
---
Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
> 
> # Using the magrittr syntax:
> require(magrittr)
Loading required package: magrittr
> data %>% smle(ll_logis)
location: 5.111 (± 0.3764)
scale: 2.179 (± 0.183)
> 
> # Comparision with the output of fitdistr (MASS package), which works for a
> # limited number of predefined distributions:
> require(MASS)
Loading required package: MASS
> fitdistr(data, "logistic")
   location      scale  
  5.1114264   2.1787668 
 (0.3764149) (0.1829733)
> 
> # Example with an intensity object:
> require(magrittr)
> require(dplyr)
Loading required package: dplyr
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
> data <- tomato_tswv$field_1929 %>%
+     filter(t == 1) %>%
+     incidence() %>%
+     clump(unit_size = c(x = 3, y = 3))
Error in t == 1 : 
  comparison (1) is possible only for atomic and list types
Calls: %>% ... eval -> eval -> _fseq -> freduce -> <Anonymous> -> filter
Execution halted
Running examples in 'EpiReport-Ex.R' failed
The error most likely occurred in:

> ### Name: filterDisease
> ### Title: Filter disease parameters
> ### Aliases: filterDisease
> 
> ### ** Examples
> 
> disease <- "SALM"
> reportParameters <- EpiReport::AERparams
> reportParameters <- filterDisease(disease, reportParameters)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: filterDisease ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'EpiReport_Vignette.Rmd' using rmarkdown
Quitting from lines 153-162 (EpiReport_Vignette.Rmd) 
Error: processing vignette 'EpiReport_Vignette.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'EpiReport_Vignette.Rmd'

SUMMARY: processing the following file failed:
  'EpiReport_Vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'EpiSignalDetection-Ex.R' failed
The error most likely occurred in:

> ### Name: aggAtlasExport
> ### Title: Aggregate filtered final Atlas export
> ### Aliases: aggAtlasExport
> 
> ### ** Examples
> 
> #-- Setting the parameters to run the report for
> input <- list(
+ disease = "Salmonellosis",
+ country = "EU-EEA - complete series",
+ indicator = "Reported cases",
+ stratification = "Confirmed cases",
+ unit = "Month",
+ daterange = c("2010-01-01", "2016-12-31"),
+ algo = "FarringtonFlexible",
+ testingperiod = 5
+ )
> 
> #-- Example dataset
> dataset <- EpiSignalDetection::SignalData
> 
> #-- Filtering on declared input parameters
> dataset <- filterAtlasExport(dataset, input)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: filterAtlasExport ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'EpiSignalDetection_Vignette.Rmd' using rmarkdown
Quitting from lines 180-191 (EpiSignalDetection_Vignette.Rmd) 
Error: processing vignette 'EpiSignalDetection_Vignette.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'EpiSignalDetection_Vignette.Rmd'

SUMMARY: processing the following file failed:
  'EpiSignalDetection_Vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
plot.episplineDensity: no visible global function definition for
  'points'
postproc: no visible global function definition for 'points'
preprocess.data: no visible global function definition for 'sd'
Undefined global functions or variables:
  points sd
Consider adding
  importFrom("graphics", "points")
  importFrom("stats", "sd")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/EpiStats.Rcheck/00install.out' for details.
Error(s) in re-building vignettes:
--- re-building 'user_guide.Rmd' using rmarkdown
Quitting from lines 13-15 (user_guide.Rmd) 
Error: processing vignette 'user_guide.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'user_guide.Rmd'

SUMMARY: processing the following file failed:
  'user_guide.Rmd'

Error: Vignette re-building failed.
Execution halted
FCIplot: no visible global function definition for 'na.omit'
FCIplot: no visible global function definition for 'tail'
FCIplot: no visible global function definition for 'grid'
FCIplot: no visible global function definition for 'polygon'
FCIplot: no visible global function definition for 'rgb'
linpred: no visible global function definition for 'lm'
mplott: no visible global function definition for 'par'
mplott: no visible global function definition for 'na.omit'
mplott: no visible global function definition for 'lines'
mplott: no visible global function definition for 'legend'
mplott: no visible global function definition for 'grid'
plott: no visible global function definition for 'lines'
plott: no visible global function definition for 'par'
plott: no visible global function definition for 'grid'
tsideplot: no visible global function definition for 'par'
tsideplot: no visible global function definition for 'axis'
tsideplot: no visible global function definition for 'grid'
Undefined global functions or variables:
  axis grid legend lines lm na.omit par polygon rgb tail
Consider adding
  importFrom("grDevices", "rgb")
  importFrom("graphics", "axis", "grid", "legend", "lines", "par",
             "polygon")
  importFrom("stats", "lm", "na.omit")
  importFrom("utils", "tail")
to your NAMESPACE file.
Error(s) in re-building vignettes:
--- re-building 'epubr.Rmd' using rmarkdown
Quitting from lines 11-15 (epubr.Rmd) 
Error: processing vignette 'epubr.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'epubr.Rmd'

SUMMARY: processing the following file failed:
  'epubr.Rmd'

Error: Vignette re-building failed.
Execution halted
eqs2lavaan: no visible global function definition for 'ignore.case'
eqs2lavaan: no visible global function definition for 'str_join'
eqs2lavaan: no visible binding for global variable 'r'
eqsCorr: no visible global function definition for 'cov2cor'
plotCov: no visible global function definition for 'cov2cor'
plotCov: no visible global function definition for 'par'
plotCov: no visible global function definition for 'image'
plotCov: no visible global function definition for 'axis'
Undefined global functions or variables:
  axis cov2cor ignore.case image par r str_join
Consider adding
  importFrom("graphics", "axis", "image", "par")
  importFrom("stats", "cov2cor")
to your NAMESPACE file.
'library' or 'require' call to 'qtl' which was already attached by Depends.
  Please remove these calls from your code.
Unexported objects imported by ':::' calls:
  'qtl:::c.scanone' 'qtl:::plot.scanone'
  See the note in ?`:::` about the use of this operator.
The following files contain a license that requires
distribution of original sources:
  'upgreek.sty'
Please ensure that you have complied with it.
Running examples in 'ergMargins-Ex.R' failed
The error most likely occurred in:

> ### Name: edge.prob2
> ### Title: Function to compute tie probabilities for each dyad.
> ### Aliases: edge.prob2
> ### Keywords: ~ERGM ~tie probabilities
> 
> ### ** Examples
> 
> ## Don't show: 
> require(ergm)
Loading required package: ergm
Loading required package: network
network: Classes for Relational Data
Version 1.16.0 created on 2019-11-30.
copyright (c) 2005, Carter T. Butts, University of California-Irvine
                    Mark S. Handcock, University of California -- Los Angeles
                    David R. Hunter, Penn State University
                    Martina Morris, University of Washington
                    Skye Bender-deMoll, University of Washington
 For citation information, type citation("network").
 Type help("network-package") to get started.

Error: package or namespace load failed for 'ergm' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
> 
> 
> set.seed(21093)
> a1<-network::as.network(matrix(c(rbinom(10, 1,.3),
+             rbinom(10, 1,.3),
+              rbinom(10, 1,.3),
+               rbinom(10, 1,.3),
+                rbinom(10, 1,.3),
+             rbinom(10, 1,.3),
+             rbinom(10, 1,.3),
+             rbinom(10, 1,.3),
+             rbinom(10, 1,.3),
+             rbinom(10, 1,.3)),
+           nrow=10,ncol=10))
> 
> network::set.vertex.attribute(a1,"var.1",rbinom(10,1,.3))
> 
> a<-ergm(a1~edges+nodeifactor("var.1")+nodeofactor("var.1"))
Error in ergm(a1 ~ edges + nodeifactor("var.1") + nodeofactor("var.1")) : 
  could not find function "ergm"
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ergm.count.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ergm.ego.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ergmito.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ergm.rank.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ergm.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ergm.userterms.Rcheck/00install.out' for details.
Package vignette with placeholder title 'Vignette Title':
  'errorize.Rmd'
Running examples in 'eRTG3D-Ex.R' failed
The error most likely occurred in:

> ### Name: plot3d
> ### Title: Plot track(s) with a surface of a digital elevation model in
> ###   three dimensions
> ### Aliases: plot3d
> 
> ### ** Examples
> 
> plot3d(niclas)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: plot3d ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
ESA: no visible binding for global variable 'var'
plot.esabcv: no visible global function definition for 'points'
plot.esabcv: no visible global function definition for 'axis'
plot.esabcv: no visible global function definition for 'title'
Undefined global functions or variables:
  axis points title var
Consider adding
  importFrom("graphics", "axis", "points", "title")
  importFrom("stats", "var")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/escalation.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/eSDM.Rcheck/00install.out' for details.
ESEA.Main: no visible global function definition for 'rnorm'
ESEA.Main: no visible global function definition for 'sd'
ESEA.Main: no visible global function definition for 'p.adjust'
PlotGlobEdgeCorProfile: no visible global function definition for
  'lines'
PlotGlobEdgeCorProfile: no visible global function definition for
  'colors'
PlotGlobEdgeCorProfile: no visible global function definition for
  'points'
PlotGlobEdgeCorProfile: no visible global function definition for
  'legend'
PlotGlobEdgeCorProfile: no visible global function definition for
  'text'
PlotPathwayGraph: no visible global function definition for 'par'
PlotRunEnrichment: no visible global function definition for 'lines'
PlotRunEnrichment: no visible global function definition for 'colors'
PlotRunEnrichment: no visible global function definition for 'text'
SavePathway2File: no visible global function definition for 'is'
calEdgeCorScore: no visible global function definition for 'na.omit'
Undefined global functions or variables:
  colors is legend lines na.omit p.adjust par points rnorm sd text
Consider adding
  importFrom("grDevices", "colors")
  importFrom("graphics", "legend", "lines", "par", "points", "text")
  importFrom("methods", "is")
  importFrom("stats", "na.omit", "p.adjust", "rnorm", "sd")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Package in Depends field not imported from: 'methods'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
rAllRisksFactors: no visible global function definition for 'new'
rAssetDistribution: no visible global function definition for 'new'
rDefaultSpread: no visible global function definition for 'new'
rLiquiditySpread: no visible global function definition for 'new'
rRealEstate: no visible global function definition for 'new'
rShortRate: no visible global function definition for 'new'
rStock: no visible global function definition for 'new'
EuroCall_Stock_PriceDistribution,Scenarios: no visible global function
  definition for 'pnorm'
EuroCall_ZC_PriceDistribution,Scenarios: no visible global function
  definition for 'pnorm'
EuroPut_Stock_PriceDistribution,Scenarios: no visible global function
  definition for 'pnorm'
EuroPut_ZC_PriceDistribution,Scenarios: no visible global function
  definition for 'pnorm'
MartingaleTest,Scenarios: no visible global function definition for
  'lines'
MartingaleTest,Scenarios: no visible global function definition for
  'title'
customPathsGeneration,Scenarios: no visible global function definition
  for 'rnorm'
Undefined global functions or variables:
  lines new pnorm rnorm title
Consider adding
  importFrom("graphics", "lines", "title")
  importFrom("methods", "new")
  importFrom("stats", "pnorm", "rnorm")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Malformed Description field: should contain one or more complete sentences.
cv.ES: no visible binding for global variable 'var'
Undefined global functions or variables:
  var
Consider adding
  importFrom("stats", "var")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ESTER.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/EstimateGroupNetwork.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/estimraw.Rcheck/00install.out' for details.
There are ::: calls to the package's namespace in its code. A package
  almost never needs to use ::: for its own objects:
  'estoutstorage'
descsto: no visible global function definition for 'is'
Undefined global functions or variables:
  is
Consider adding
  importFrom("methods", "is")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
.Transition: no visible global function definition for 'rnorm'
.Transition.DC: no visible global function definition for 'runif'
Simu.Cond.HR: no visible global function definition for 'rpois'
Simu.Cond.HR: no visible global function definition for 'runif'
Simu.Cond.HR: no visible global function definition for 'hist'
Simu.Cond.HR: no visible global function definition for 'var'
Simu.HR: no visible global function definition for 'rpois'
Simu.HR: no visible global function definition for 'runif'
Simu.HR: no visible global function definition for 'hist'
Simu.HR: no visible global function definition for 'var'
Undefined global functions or variables:
  hist rnorm rpois runif var
Consider adding
  importFrom("graphics", "hist")
  importFrom("stats", "rnorm", "rpois", "runif", "var")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/esvis.Rcheck/00install.out' for details.
Packages in Depends field not imported from:
  'Hmisc' 'xtable'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
corr_p_cell: no visible global function definition for 'cov.wt'
iqr_cell: no visible global function definition for 'quantile'
iqr_cell: no visible global function definition for 'wtd.quantile'
mean_sd_cell: no visible global function definition for 'wtd.mean'
mean_sd_cell: no visible global function definition for 'wtd.var'
mode_cell: no visible global function definition for 'wtd.table'
quantile_cell: no visible global function definition for 'wtd.quantile'
quantile_cell: no visible global function definition for 'quantile'
stat_cell: no visible global function definition for 'quantile'
stat_cell: no visible global function definition for 'wtd.quantile'
stat_cell: no visible global function definition for 'wtd.mean'
stat_cell: no visible global function definition for 'wtd.var'
stat_cell: no visible global function definition for 'mad'
stat_cell: no visible global function definition for 'wtd.table'
Undefined global functions or variables:
  cov.wt mad quantile wtd.mean wtd.quantile wtd.table wtd.var
Consider adding
  importFrom("stats", "cov.wt", "mad", "quantile")
to your NAMESPACE file.
etc.diff: no visible global function definition for 'model.frame'
etc.diff: no visible binding for global variable 'sd'
etc.diff: no visible global function definition for 'qt'
etc.diff: no visible global function definition for 'pt'
etc.diff: no visible global function definition for 'wilcox.test'
etc.rat: no visible global function definition for 'model.frame'
etc.rat: no visible binding for global variable 'sd'
etc.rat: no visible global function definition for 'qt'
etc.rat: no visible global function definition for 'pt'
Undefined global functions or variables:
  model.frame pt qt sd wilcox.test
Consider adding
  importFrom("stats", "model.frame", "pt", "qt", "sd", "wilcox.test")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ether.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ethnobotanyR.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/etl.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/eudract.Rcheck/00install.out' for details.
Running examples in 'eurlex-Ex.R' failed
The error most likely occurred in:

> ### Name: elx_label_eurovoc
> ### Title: Label EuroVoc concepts
> ### Aliases: elx_label_eurovoc
> 
> ### ** Examples
> 
> elx_label_eurovoc(uri_eurovoc = "http://eurovoc.europa.eu/5760", alt_labels = TRUE, language = "fr")
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: elx_label_eurovoc ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'eurlexpkg.Rmd' using rmarkdown
Quitting from lines 37-41 (eurlexpkg.Rmd) 
Error: processing vignette 'eurlexpkg.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'eurlexpkg.Rmd'

SUMMARY: processing the following file failed:
  'eurlexpkg.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/europepmc.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/eurostat.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/EvaluateCore.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/evaluator.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
powerSet : <anonymous>: no visible global function definition for
  'combn'
Undefined global functions or variables:
  combn
Consider adding
  importFrom("utils", "combn")
to your NAMESPACE file.
mposterior: no visible global function definition for 'optim'
rl.pred: no visible global function definition for 'matplot'
rl.pst: no visible binding for global variable 'quantile'
rl.pst: no visible global function definition for 'matplot'
Undefined global functions or variables:
  matplot optim quantile
Consider adding
  importFrom("graphics", "matplot")
  importFrom("stats", "optim", "quantile")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/EventDetectGUI.Rcheck/00install.out' for details.
Running examples in 'EventDetectR-Ex.R' failed
The error most likely occurred in:

> ### Name: qualityStatistics
> ### Title: qualityStatistics
> ### Aliases: qualityStatistics
> 
> ### ** Examples
> 
> train <- geccoIC2018Train[15000:17000,]
> edObject <- detectEvents(train[,-c(1,11)],windowSize = 1000,
+                 nIterationsRefit = 500,verbosityLevel = 2,
+                 postProcessorControl = list(nStandardDeviationseventThreshold = 3))
> qualityStatistics(edObject, train$EVENT)
Error: Package "caret" needed for this function to work. Please install it.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/eventr.Rcheck/00install.out' for details.
Found the following hidden files and directories:
  .gitignore
These were most likely included in error. See section 'Package
structure' in the 'Writing R Extensions' manual.
Malformed Description field: should contain one or more complete sentences.
make_dyads : ff: no visible global function definition for 'aggregate'
make_scale: no visible global function definition for 'read.csv'
plot_dyad: no visible global function definition for 'is'
read_eventdata : read_ed_file: no visible global function definition
  for 'read.csv'
Undefined global functions or variables:
  aggregate is read.csv
Consider adding
  importFrom("methods", "is")
  importFrom("stats", "aggregate")
  importFrom("utils", "read.csv")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
installed size is  5.8Mb
  sub-directories of 1Mb or more:
    doc   5.0Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/evidence.Rcheck/00install.out' for details.
Package vignette with placeholder title 'Vignette Title':
  'UsingEvolutionaryGames.Rmd'
evolvabilityBetaMCMC : <anonymous>: no visible binding for global
  variable 'median'
evolvabilityBetaMCMC: no visible binding for global variable 'median'
evolvabilityBetaMCMC2: no visible binding for global variable 'median'
evolvabilityMeans: no visible global function definition for 'var'
evolvabilityMeansMCMC : <anonymous>: no visible global function
  definition for 'var'
evolvabilityMeansMCMC: no visible binding for global variable 'median'
randomBeta: no visible global function definition for 'rnorm'
Undefined global functions or variables:
  median rnorm var
Consider adding
  importFrom("stats", "median", "rnorm", "var")
to your NAMESPACE file.
Found the following significant warnings:
  Warning: namespace 'dplyr' is not available and has been replaced
See 'd:/Rcompile/CRANpkg/local/4.0/evoper.Rcheck/00install.out' for details.
Package in Depends field not imported from: 'evd'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
DPOT: no visible global function definition for 'optim'
mop.rho: no visible global function definition for 'median'
Undefined global functions or variables:
  median optim
Consider adding
  importFrom("stats", "median", "optim")
to your NAMESPACE file.
EW : PhiP : Phi: no visible global function definition for 'pnorm'
Undefined global functions or variables:
  pnorm
Consider adding
  importFrom("stats", "pnorm")
to your NAMESPACE file.
BinomialCIone: no visible global function definition for 'na.omit'
PairedCIone: no visible global function definition for 'na.omit'
Undefined global functions or variables:
  na.omit
Consider adding
  importFrom("stats", "na.omit")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
build.mcx.obj: no visible global function definition for 'glm'
build.mcx.obj: no visible binding for global variable 'poisson'
build.mcx.obj: no visible global function definition for 'fitted'
cab: no visible global function definition for 'rbinom'
cab: no visible global function definition for 'runif'
mcexact: no visible global function definition for 'update'
rounded.tprob: no visible global function definition for 'pt'
simtable.cab: no visible global function definition for 'rbinom'
simtable.cab: no visible global function definition for 'runif'
Undefined global functions or variables:
  fitted glm poisson pt rbinom runif update
Consider adding
  importFrom("stats", "fitted", "glm", "poisson", "pt", "rbinom",
             "runif", "update")
to your NAMESPACE file.
plot.pgrid: no visible global function definition for 'image'
statistic.cv: no visible global function definition for 'quantile'
statistic.sim: no visible global function definition for 'contourLines'
Undefined global functions or variables:
  contourLines image quantile
Consider adding
  importFrom("grDevices", "contourLines")
  importFrom("graphics", "image")
  importFrom("stats", "quantile")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ExcelFunctionsR.Rcheck/00install.out' for details.
getCOMElements: no visible global function definition for 'getExtends'
Undefined global functions or variables:
  getExtends
Error(s) in re-building vignettes:
--- re-building 'ExomeDepth-vignette.Rnw' using knitr
Quitting from lines 302-306 (ExomeDepth-vignette.Rnw) 
Error: processing vignette 'ExomeDepth-vignette.Rnw' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'ExomeDepth-vignette.Rnw'

SUMMARY: processing the following file failed:
  'ExomeDepth-vignette.Rnw'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ExPanDaR.Rcheck/00install.out' for details.
Running examples in 'ExpertChoice-Ex.R' failed
The error most likely occurred in:

> ### Name: check_overshadow
> ### Title: Check Overshadow - Pareto Dominate Solutions
> ### Aliases: check_overshadow
> 
> ### ** Examples
> 
> #See Step 7 of the Practical Introduction to ExpertChoice Vignette.
> # Step 1
> attrshort  = list(condition = c("0", "1", "2"),
+ technical =c("0", "1", "2"),
+ provenance = c("0", "1"))
> 
> #Step 2
> #' # ff stands for "full fatorial"
>  ff  <-  full_factorial(attrshort)
>  af  <-  augment_levels(ff)
Applying B mat
> # af stands for "augmented factorial"
> 
> # Step 3
> # Choose a design type: Federov or Orthogonal. Here an Orthogonal one is used.
> nlevels <- unlist(purrr::map(ff, function(x){length(levels(x))}))
> fractional_factorial <- DoE.base::oa.design(nlevels = nlevels, columns = "min34")
creating full factorial with 18 runs ...

> 
> # Step 4 & 5
> # The functional draws out the rows from the original augmented full factorial design.
> colnames(fractional_factorial) <- colnames(ff)
> fractional <- search_design(ff, fractional_factorial)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: search_design ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'practical.Rmd' using rmarkdown
Loading required package: grid
Loading required package: conf.design

Attaching package: 'DoE.base'

The following objects are masked from 'package:stats':

    aov, lm

The following object is masked from 'package:graphics':

    plot.design

The following object is masked from 'package:base':

    lengths

Quitting from lines 179-181 (practical.Rmd) 
Error: processing vignette 'practical.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'practical.Rmd'

--- re-building 'include_theory.Rnw' using Sweave
--- finished re-building 'include_theory.Rnw'

SUMMARY: processing the following file failed:
  'practical.Rmd'

Error: Vignette re-building failed.
Execution halted
print.cdf : numform: warning in formatC(x, dig = digits): partial
  argument match of 'dig' to 'digits'
print.cdf: warning in get("x", env = environment(x)): partial argument
  match of 'env' to 'envir'
print.cdf: warning in get("y", env = environment(x)): partial argument
  match of 'env' to 'envir'
print.ogive : numform: warning in formatC(x, dig = digits): partial
  argument match of 'dig' to 'digits'
print.ogive: warning in get("x", env = environment(x)): partial
  argument match of 'env' to 'envir'
print.ogive: warning in get("y", env = environment(x)): partial
  argument match of 'env' to 'envir'
quantile.expert: warning in formatC(paste(100 * probs, "%", sep = ""),
  format = "fg", wid = 1, digits = dig): partial argument match of
  'wid' to 'width'
MS: no visible global function definition for 'tail'
Undefined global functions or variables:
  tail
Consider adding
  importFrom("utils", "tail")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/explore.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/explor.Rcheck/00install.out' for details.
Package vignette with placeholder title 'Vignette Title':
  'Vignette.Rmd'
Malformed Description field: should contain one or more complete sentences.
index.citations: no visible global function definition for
  'txtProgressBar'
read.exsic: no visible global function definition for 'read.csv'
update.pb: no visible global function definition for
  'setTxtProgressBar'
Undefined global functions or variables:
  read.csv setTxtProgressBar txtProgressBar
Consider adding
  importFrom("utils", "read.csv", "setTxtProgressBar", "txtProgressBar")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/extdplyr.Rcheck/00install.out' for details.
Package in Depends field not imported from: 'rmeta'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
extfunnel: no visible global function definition for 'qnorm'
extfunnel: no visible global function definition for 'meta.summaries'
extfunnel: no visible global function definition for 'flush.console'
extfunnel: no visible global function definition for 'qt'
extfunnel: no visible global function definition for 'dev.new'
extfunnel: no visible global function definition for 'par'
extfunnel: no visible global function definition for 'polygon'
extfunnel: no visible global function definition for 'segments'
extfunnel: no visible global function definition for 'abline'
extfunnel: no visible global function definition for 'axis'
extfunnel: no visible global function definition for 'box'
Undefined global functions or variables:
  abline axis box dev.new flush.console meta.summaries par polygon
  qnorm qt segments
Consider adding
  importFrom("grDevices", "dev.new")
  importFrom("graphics", "abline", "axis", "box", "par", "polygon",
             "segments")
  importFrom("stats", "qnorm", "qt")
  importFrom("utils", "flush.console")
to your NAMESPACE file.
bars: no visible global function definition for 'segments'
cv.binomial: no visible binding for global variable 'var'
cv.binomial: no visible global function definition for 'abline'
cv.normal: no visible binding for global variable 'var'
cv.normal: no visible global function definition for 'abline'
cv.poisson: no visible binding for global variable 'var'
cv.poisson: no visible global function definition for 'abline'
plot.extlasso: no visible global function definition for 'matplot'
plot.extlasso: no visible global function definition for 'axis'
Undefined global functions or variables:
  abline axis matplot segments var
Consider adding
  importFrom("graphics", "abline", "axis", "matplot", "segments")
  importFrom("stats", "var")
to your NAMESPACE file.
exbio: no visible global function definition for 'as.formula'
exbio: no visible global function definition for 'glm'
exbio: no visible binding for global variable 'gaussian'
exbio: no visible global function definition for 'Gamma'
exbio: no visible global function definition for 'pchisq'
Undefined global functions or variables:
  Gamma as.formula gaussian glm pchisq
Consider adding
  importFrom("stats", "Gamma", "as.formula", "gaussian", "glm", "pchisq")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
font_install: no visible global function definition for
  'installed.packages'
font_install: no visible global function definition for
  'install.packages'
fonttable_add: no visible global function definition for 'write.csv'
Undefined global functions or variables:
  install.packages installed.packages write.csv
Consider adding
  importFrom("utils", "install.packages", "installed.packages",
             "write.csv")
to your NAMESPACE file.
toJavaMatrix2D: no visible global function definition for 'is'
Undefined global functions or variables:
  is
Consider adding
  importFrom("methods", "is")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
bootstrapCMLE: no visible global function definition for 'qweibull'
bootstrapCMLE: no visible binding for global variable 'sd'
bootstrapCMLE: no visible global function definition for 'quantile'
bootstrapCenWbMix: no visible binding for global variable 'sd'
bootstrapCenWbMix: no visible global function definition for 'quantile'
cenWeibullMLE: no visible global function definition for 'sd'
expmx.p2.censor: no visible global function definition for 'dweibull'
expmx.p2.censor: no visible global function definition for 'pweibull'
genWbMixIni: no visible global function definition for 'runif'
log.llh.p2.censor: no visible global function definition for 'dweibull'
log.llh.p2.censor: no visible global function definition for 'pweibull'
quanWbMix : t.fun: no visible global function definition for 'pweibull'
quanWbMix: no visible global function definition for 'uniroot'
quanWbMix.int : t.fun: no visible global function definition for
  'pweibull'
quanWbMix.int: no visible global function definition for 'uniroot'
simWbMix: no visible global function definition for 'rbinom'
simWbMix: no visible global function definition for 'rweibull'
Undefined global functions or variables:
  dweibull pweibull quantile qweibull rbinom runif rweibull sd uniroot
Consider adding
  importFrom("stats", "dweibull", "pweibull", "quantile", "qweibull",
             "rbinom", "runif", "rweibull", "sd", "uniroot")
to your NAMESPACE file.
Package suggested but not available for checking: 'exuberdata'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/exuber.Rcheck/00install.out' for details.
Error(s) in re-building vignettes:
--- re-building 'basics.Rmd' using rmarkdown
Loading required package: eyelinker
Loading required package: dplyr
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Loading required package: tidyr
Error: package or namespace load failed for 'tidyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Loading required package: ggplot2
Loading required package: intervals
Loading required package: stringr
Quitting from lines 81-82 (basics.Rmd) 
Error: processing vignette 'basics.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'basics.Rmd'

--- re-building 'format.Rmd' using rmarkdown
Loading required package: eyelinker
--- finished re-building 'format.Rmd'

SUMMARY: processing the following file failed:
  'basics.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/eye.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/eyeRead.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ezcox.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ezec.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ezEDA.Rcheck/00install.out' for details.
Malformed Title field: should not end in a period.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ezplot.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
BugReports field is not a suitable URL but contains an email address:
   use the Contact field instead
createFormula: no visible global function definition for 'tail'
createFormula: no visible global function definition for 'head'
createFormula: no visible global function definition for 'as.formula'
ezsim: no visible global function definition for 'runif'
plot.ezsim: no visible global function definition for 'quantile'
plot.ezsim: no visible global function definition for 'head'
plot.ezsim: no visible global function definition for 'tail'
plot.ezsim: no visible binding for global variable 'dnorm'
plot.ezsim: no visible binding for global variable 'pdf'
plot.ezsim: no visible global function definition for 'dev.off'
plot.ezsim : <anonymous>: no visible global function definition for
  'dev.new'
plot.summary.ezsim: no visible global function definition for 'head'
plot.summary.ezsim: no visible global function definition for 'tail'
plot.summary.ezsim: no visible binding for global variable 'pdf'
plot.summary.ezsim: no visible global function definition for 'dev.off'
plot.summary.ezsim : <anonymous>: no visible global function definition
  for 'dev.new'
Undefined global functions or variables:
  as.formula dev.new dev.off dnorm head pdf quantile runif tail
Consider adding
  importFrom("grDevices", "dev.new", "dev.off", "pdf")
  importFrom("stats", "as.formula", "dnorm", "quantile", "runif")
  importFrom("utils", "head", "tail")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fable.prophet.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fable.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fabletools.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/facerec.Rcheck/00install.out' for details.
gibbs2: no visible global function definition for 'rnorm'
gibbs_sampling: no visible global function definition for 'rnorm'
Undefined global functions or variables:
  rnorm
Consider adding
  importFrom("stats", "rnorm")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
fma: no visible global function definition for 'factanal'
fma: no visible global function definition for 'runif'
fma: no visible global function definition for 'kmeans'
fma: no visible global function definition for 'var'
fma.em.alg: no visible global function definition for 'var'
misc : q: no visible global function definition for 'name'
Undefined global functions or variables:
  factanal kmeans name runif var
Consider adding
  importFrom("stats", "factanal", "kmeans", "runif", "var")
to your NAMESPACE file.
Unavailable namespace imported from by a ':::' call: 'ggpubr'
  See the note in ?`:::` about the use of this operator.
Running examples in 'factoextra-Ex.R' failed
The error most likely occurred in:

> ### Name: eclust
> ### Title: Visual enhancement of clustering analysis
> ### Aliases: eclust
> 
> ### ** Examples
> 
> # Load and scale data
> data("USArrests")
> df <- scale(USArrests)
> 
> # Enhanced k-means clustering
> # nboot >= 500 is recommended
> res.km <- eclust(df, "kmeans", nboot = 2)
Error in inDL(x, as.logical(local), as.logical(now), ...) : 
  unable to load shared object 'D:/temp/RtmpS4yFTC/RLIBS_22d342d5237ce/dplyr/libs/x64/dplyr.dll':
  LoadLibrary failure:  Das angegebene Modul wurde nicht gefunden.
Calls: eclust ... asNamespace -> loadNamespace -> library.dynam -> dyn.load -> inDL
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/factorMerger.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/Factoshiny.Rcheck/00install.out' for details.
Packages in Depends field not imported from:
  'RCurl' 'RJSONIO' 'methods'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
createFactualConnection: no visible global function definition for
  'new'
factualGetSchema: no visible global function definition for 'fromJSON'
factualRead: no visible global function definition for 'curlEscape'
factualRead: no visible global function definition for 'fromJSON'
processFactualReadJSON: no visible global function definition for 'new'
processFactualSchemaJSON: no visible global function definition for
  'new'
Undefined global functions or variables:
  curlEscape fromJSON new
Consider adding
  importFrom("methods", "new")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fairness.Rcheck/00install.out' for details.
faisalconjoint: no visible global function definition for 'barplot'
faisalconjoint: no visible global function definition for 'text'
faisalconjoint: no visible global function definition for 'jpeg'
faisalconjoint: no visible global function definition for 'dev.off'
Undefined global functions or variables:
  barplot dev.off jpeg text
Consider adding
  importFrom("grDevices", "dev.off", "jpeg")
  importFrom("graphics", "barplot", "text")
to your NAMESPACE file.
Package vignette with placeholder title 'Vignette Title':
  'my-vignette.Rmd'
File 'fame/R/windows/zzz.R':
  .onLoad calls:
    packageStartupMessage("FAME environment variable not set; assuming ",     defaultDir)
    packageStartupMessage("FAME directory ", fameDir, " not found.\n",     "If you have FAME installed, specify it's location ", "via the FAME environment variable.\n",     "Otherwise, this package is pretty useless.\n")

See section 'Good practice' in '?.onAttach'.
coef.FAMILY: no visible global function definition for 'glm'
coef.FAMILY: no visible global function definition for 'lm'
fm2v: no visible global function definition for 'na.omit'
l_inf_prox: no visible global function definition for 'tail'
predict.FAMILY: no visible global function definition for 'coef'
predict.FAMILY: no visible global function definition for 'lm'
predict.FAMILY: no visible global function definition for 'predict'
predict.FAMILY: no visible global function definition for 'glm'
predict.FAMILY: no visible global function definition for 'predict.glm'
v2fm: no visible global function definition for 'tail'
Undefined global functions or variables:
  coef glm lm na.omit predict predict.glm tail
Consider adding
  importFrom("stats", "coef", "glm", "lm", "na.omit", "predict",
             "predict.glm")
  importFrom("utils", "tail")
to your NAMESPACE file.
Packages in Depends field not imported from:
  'impute' 'mnormt'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
File
  LICENSE
is not mentioned in the DESCRIPTION file.
S3 methods shown with full name in documentation object 'plot.fANCOVA':
  'plot.fANCOVA'

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fasstr.Rcheck/00install.out' for details.
installed size is  5.5Mb
  sub-directories of 1Mb or more:
    data   3.1Mb
    libs   2.4Mb
Package vignette with placeholder title 'Vignette Title':
  'quick-usage-guide-to-the-fastglm-package.Rmd'
basis_hica: no visible global function definition for 'princomp'
energy_hica: no visible global function definition for 'dev.new'
energy_hica: no visible global function definition for 'points'
energy_hica: no visible global function definition for 'legend'
Undefined global functions or variables:
  dev.new legend points princomp
Consider adding
  importFrom("grDevices", "dev.new")
  importFrom("graphics", "legend", "points")
  importFrom("stats", "princomp")
to your NAMESPACE file.
Package suggested but not available for checking: 'coxKM'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fastLink.Rcheck/00install.out' for details.
File 'fastmatch/libs/i386/fastmatch.dll':
  Found non-API call to R: 'match5'
File 'fastmatch/libs/x64/fastmatch.dll':
  Found non-API call to R: 'match5'

Compiled code should not call non-API entry points in R.

See 'Writing portable packages' in the 'Writing R Extensions' manual.
Running examples in 'fastpseudo-Ex.R' failed
The error most likely occurred in:

> ### Name: fast_pseudo_mean
> ### Title: Calculate pseudo-observations.
> ### Aliases: fast_pseudo_mean
> 
> ### ** Examples
> 
> # Dummy data
> 
> id <- c(1, 2, 3, 4)
> female <- c(0, 1, 1, 0)
> time <- c(23, 45, 38, 66)
> event <- c(1, 0, 0, 0)
> 
> # Compute pseudo-observations
> 
> pseudo = fast_pseudo_mean(time, event, 50)
> 
> # Create a data frame
> 
> test <- data.frame(id, female, pseudo)
> 
> # Fit a regression model
> 
> library(geepack)
Error: package or namespace load failed for 'geepack' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fastqcr.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fastquant.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fastR2.Rcheck/00install.out' for details.
installed size is  5.7Mb
  sub-directories of 1Mb or more:
    Rcgi      2.8Mb
    cgi-bin   2.7Mb
.run: no visible binding for global variable 'init'
.run: no visible global function definition for 'init'
.run: no visible binding for global variable 'run'
Undefined global functions or variables:
  init run
Error(s) in re-building vignettes:
--- re-building 'FateID.Rmd' using rmarkdown
Quitting from lines 141-142 (FateID.Rmd) 
Error: processing vignette 'FateID.Rmd' failed with diagnostics:
unable to load shared object 'D:/temp/RtmpagJx62/RLIBS_1176867ae2dc4/dplyr/libs/x64/dplyr.dll':
  LoadLibrary failure:  Das angegebene Modul wurde nicht gefunden.

--- failed re-building 'FateID.Rmd'

SUMMARY: processing the following file failed:
  'FateID.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'fauxnaif-Ex.R' failed
The error most likely occurred in:

> ### Name: na_if_in
> ### Title: Convert values to NA
> ### Aliases: na_if_in na_if na_if_not
> 
> ### ** Examples
> 
> -1:10
 [1] -1  0  1  2  3  4  5  6  7  8  9 10
> # We can replace -1...
> # ... explicitly
> na_if_in(-1:10, -1)
 [1] NA  0  1  2  3  4  5  6  7  8  9 10
> # ... by specifying values to keep
> na_if_not(-1:10, 0:10)
 [1] NA  0  1  2  3  4  5  6  7  8  9 10
> # ... using a formula
> na_if_in(-1:10, ~ . < 0)
 [1] NA  0  1  2  3  4  5  6  7  8  9 10
> # ... or using a function
> na_if_in(-1:10, min)
 [1] NA  0  1  2  3  4  5  6  7  8  9 10
> 
> messy_string <- c("abc", "", "def", "NA", "ghi", 42, "jkl", "NULL", "mno")
> # We can replace unwanted values...
> # ... one at a time
> na_if_in(messy_string, "")
[1] "abc"  NA     "def"  "NA"   "ghi"  "42"   "jkl"  "NULL" "mno" 
> # ... or all at once
> na_if_in(messy_string, "", "NA", "NULL", 1:100)
[1] "abc" NA    "def" NA    "ghi" NA    "jkl" NA    "mno"
> na_if_in(messy_string, c("", "NA", "NULL", 1:100))
[1] "abc" NA    "def" NA    "ghi" NA    "jkl" NA    "mno"
> na_if_in(messy_string, list("", "NA", "NULL", 1:100))
[1] "abc" NA    "def" NA    "ghi" NA    "jkl" NA    "mno"
> # ... or using a clever formula
> grepl("[a-z]{3,}", messy_string)
[1]  TRUE FALSE  TRUE FALSE  TRUE FALSE  TRUE FALSE  TRUE
> na_if_not(messy_string, ~ grepl("[a-z]{3,}", .))
[1] "abc" NA    "def" NA    "ghi" NA    "jkl" NA    "mno"
> 
> # na_if_in() is particularly useful inside dplyr::mutate
> faux_census %>%
+   dplyr::mutate(
+     state = na_if_in(state, "Canada"),
+     age   = na_if_in(age, ~ . < 18, ~ . > 120)
+   )
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: %>% ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'fauxnaif.Rmd' using rmarkdown
Quitting from lines 76-77 (fauxnaif.Rmd) 
Error: processing vignette 'fauxnaif.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'fauxnaif.Rmd'

SUMMARY: processing the following file failed:
  'fauxnaif.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/faux.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fbar.Rcheck/00install.out' for details.
installed size is  5.8Mb
  sub-directories of 1Mb or more:
    data   3.5Mb
    libs   2.2Mb
FBN.histogramMaxima: no visible global function definition for 'hist'
FBN.kmeans: no visible global function definition for 'median'
FBN.kmeans: no visible global function definition for 'kmeans'
FBNormalization: no visible global function definition for 'read.table'
FBNormalization: no visible global function definition for 'median'
FBNormalization: no visible global function definition for 'hist'
FBNormalization: no visible global function definition for 'par'
FBNormalization: no visible global function definition for 'dev.print'
FBNormalization: no visible binding for global variable 'bmp'
FBNormalization: no visible global function definition for 'sd'
FBNormalization: no visible global function definition for
  'write.table'
medianFilter: no visible global function definition for 'median'
Undefined global functions or variables:
  bmp dev.print hist kmeans median par read.table sd write.table
Consider adding
  importFrom("grDevices", "bmp", "dev.print")
  importFrom("graphics", "hist", "par")
  importFrom("stats", "kmeans", "median", "sd")
  importFrom("utils", "read.table", "write.table")
to your NAMESPACE file.
'library' or 'require' calls in package code:
  'RCurl' 'RJSONIO' 'XML' 'glmnet' 'httr' 'speedglm' 'tcltk' 'xtable'
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Packages in Depends field not imported from:
  'MASS' 'combinat' 'glmnet'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
fcd.cluster: no visible global function definition for 'kmeans'
fcd.start: no visible global function definition for 'ginv'
fcd.start: no visible global function definition for 'glmnet'
gen.dcbm: no visible global function definition for 'rbinom'
gen.sbm: no visible global function definition for 'rbinom'
mis.cluster: no visible global function definition for 'permn'
spectral.clustering: no visible global function definition for 'kmeans'
Undefined global functions or variables:
  ginv glmnet kmeans permn rbinom
Consider adding
  importFrom("stats", "kmeans", "rbinom")
to your NAMESPACE file.
PTSingleAssetBarrierOption2: no visible global function definition for
  'new'
newton: no visible global function definition for 'abline'
probInRange: no visible global function definition for 'pnorm'
shortfall_risk: no visible global function definition for 'pnorm'
Undefined global functions or variables:
  abline new pnorm
Consider adding
  importFrom("graphics", "abline")
  importFrom("methods", "new")
  importFrom("stats", "pnorm")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
installed size is  6.4Mb
  sub-directories of 1Mb or more:
    data   2.4Mb
    doc    3.5Mb
installed size is  5.4Mb
  sub-directories of 1Mb or more:
    data   3.3Mb
    libs   2.0Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fdANOVA.Rcheck/00install.out' for details.
installed size is  5.2Mb
  sub-directories of 1Mb or more:
    data   2.3Mb
    libs   2.3Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fdistr.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/FDRreg.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/featuretoolsR.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/febr.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/FedData.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fedregs.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/feedeR.Rcheck/00install.out' for details.
Running examples in 'feisr-Ex.R' failed
The error most likely occurred in:

> ### Name: bsfeistest
> ### Title: Bootstrapped Regression Test
> ### Aliases: bsfeistest
> 
> ### ** Examples
> 
> data("mwp", package = "feisr")
> feis.mod <- feis(lnw ~ marry + enrol | year,
+                  data = mwp, id = "id", robust = TRUE)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: feis ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'feisr-vignette.Rmd' using rmarkdown
Quitting from lines 82-84 (feisr-vignette.Rmd) 
Error: processing vignette 'feisr-vignette.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'feisr-vignette.Rmd'

SUMMARY: processing the following file failed:
  'feisr-vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fergm.Rcheck/00install.out' for details.
Running examples in 'FertBoot-Ex.R' failed
The error most likely occurred in:

> ### Name: f.linear.plateau
> ### Title: Fitting linear plateau model using mutiple initial vaues
> ### Aliases: f.linear.plateau
> 
> ### ** Examples
> 
> 
> set.seed(4)
> x <- rep(1:300, each=4)
> a <- 8; b <- 0.05; c <- 100
> y <- a + b * (x - c) * (x <= c) +
+     rnorm(length(x), sd=0.1)
> d <- cbind(x,y)
> 
> # a converged example:
> ans <- f.linear.plateau(d, start=list(a = 7, b = 0.1, c = 150),
+     plus_minus=10, n.start=10, msg=FALSE)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: f.linear.plateau ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
'library' or 'require' calls in package code:
  'ggplot2' 'gridExtra'
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
FFieldPtRepDemo: no visible global function definition for 'ggplot'
FFieldPtRepDemo: no visible binding for global variable 'mtcars'
FFieldPtRepDemo: no visible global function definition for 'aes'
FFieldPtRepDemo: no visible binding for global variable 'mpg'
FFieldPtRepDemo: no visible global function definition for 'geom_point'
FFieldPtRepDemo: no visible global function definition for 'geom_text'
FFieldPtRepDemo: no visible global function definition for 'ggtitle'
FFieldPtRepDemo: no visible global function definition for
  'geom_segment'
FFieldPtRepDemo: no visible global function definition for
  'grid.arrange'
Undefined global functions or variables:
  aes geom_point geom_segment geom_text ggplot ggtitle grid.arrange mpg
  mtcars
Consider adding
  importFrom("datasets", "mtcars")
to your NAMESPACE file.
Running examples in 'ffscrapr-Ex.R' failed
The error most likely occurred in:

> ### Name: dp_playerids
> ### Title: Import latest DynastyProcess player IDs
> ### Aliases: dp_playerids
> 
> ### ** Examples
> 
> dp_playerids()
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: dp_playerids ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'mfl_basics.Rmd' using rmarkdown
Quitting from lines 21-26 (mfl_basics.Rmd) 
Error: processing vignette 'mfl_basics.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'mfl_basics.Rmd'

--- re-building 'mfl_getendpoint.Rmd' using rmarkdown
Quitting from lines 52-60 (mfl_getendpoint.Rmd) 
Error: processing vignette 'mfl_getendpoint.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'mfl_getendpoint.Rmd'

SUMMARY: processing the following files failed:
  'mfl_basics.Rmd' 'mfl_getendpoint.Rmd'

Error: Vignette re-building failed.
Execution halted
ftest: no visible global function definition for 'wilcox.test'
ftest: no visible global function definition for 't.test'
Undefined global functions or variables:
  t.test wilcox.test
Consider adding
  importFrom("stats", "t.test", "wilcox.test")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fgeo.analyze.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fgeo.plot.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fgeo.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fgeo.tool.Rcheck/00install.out' for details.
Packages in Depends field not imported from:
  'mvtnorm' 'numDeriv'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
dmymvnorm: no visible global function definition for 'dmvnorm'
dmymvt: no visible global function definition for 'dmvt'
gof.test: no visible global function definition for 'quantile'
gof.test : ecdf: no visible global function definition for 'mecdf'
gof.test: no visible global function definition for 'jacobian'
gof.test: no visible global function definition for 'var'
gradCdfT: no visible global function definition for 'dt'
gradCdfT: no visible global function definition for 'pt'
gradCdfT: no visible global function definition for 'pmvt'
influFun: no visible global function definition for 'jacobian'
mult.sim: no visible global function definition for 'rnorm'
plackettFormula: no visible global function definition for 'pt'
plackettFormula: no visible global function definition for 'pmvt'
pmymvnorm: no visible global function definition for 'GenzBretz'
pmymvnorm: no visible global function definition for 'TVPACK'
pmymvnorm : <anonymous>: no visible global function definition for
  'pmvnorm'
pmymvt: no visible global function definition for 'GenzBretz'
pmymvt: no visible global function definition for 'TVPACK'
pmymvt : <anonymous>: no visible global function definition for 'pmvt'
rmymvnorm: no visible global function definition for 'rmvnorm'
rmymvt: no visible global function definition for 'rmvt'
Undefined global functions or variables:
  GenzBretz TVPACK dmvnorm dmvt dt jacobian mecdf pmvnorm pmvt pt
  quantile rmvnorm rmvt rnorm var
Consider adding
  importFrom("stats", "dt", "pt", "quantile", "rnorm", "var")
to your NAMESPACE file.
fgeasy: no visible global function definition for 'dist'
fgeasy : cor.est: no visible global function definition for 'cor.test'
fgeasy: no visible binding for global variable 'var'
fgperm : runrand: no visible global function definition for 'runif'
fgperm : runrand: no visible global function definition for 'ave'
fgploc : runrand: no visible global function definition for 'runif'
fgploc : runrand: no visible global function definition for 'ave'
fyshuffle: no visible global function definition for 'runif'
plot.fg: no visible global function definition for 'par'
plot.fg: no visible global function definition for 'segments'
plot.fg: no visible binding for global variable 'quantile'
plot.fg: no visible global function definition for 'abline'
plot.fg: no visible global function definition for 'axis'
summary.fg: no visible binding for global variable 'quantile'
Undefined global functions or variables:
  abline ave axis cor.test dist par quantile runif segments var
Consider adding
  importFrom("graphics", "abline", "axis", "par", "segments")
  importFrom("stats", "ave", "cor.test", "dist", "quantile", "runif",
             "var")
to your NAMESPACE file.
Found the following significant warnings:
  fgsg.h:96:61: warning: passing argument 8 of 'dpotrs_' from incompatible pointer type [-Wincompatible-pointer-types]
  fgsg.h:202:41: warning: passing argument 5 of 'dpotrf_' from incompatible pointer type [-Wincompatible-pointer-types]
  fgsg.h:347:41: warning: passing argument 5 of 'dpotrf_' from incompatible pointer type [-Wincompatible-pointer-types]
  fgsg.h:460:41: warning: passing argument 5 of 'dpotrf_' from incompatible pointer type [-Wincompatible-pointer-types]
  fgsg.h:516:61: warning: passing argument 8 of 'dpotrs_' from incompatible pointer type [-Wincompatible-pointer-types]
  fgsg.h:636:41: warning: passing argument 5 of 'dpotrf_' from incompatible pointer type [-Wincompatible-pointer-types]
  fgsg.h:717:41: warning: passing argument 5 of 'dpotrf_' from incompatible pointer type [-Wincompatible-pointer-types]
  fgsg.h:852:41: warning: passing argument 5 of 'dpotrf_' from incompatible pointer type [-Wincompatible-pointer-types]
  fgsg.h:996:41: warning: passing argument 5 of 'dpotrf_' from incompatible pointer type [-Wincompatible-pointer-types]
See 'd:/Rcompile/CRANpkg/local/4.0/FGSG.Rcheck/00install.out' for details.
installed size is  6.7Mb
  sub-directories of 1Mb or more:
    data   6.3Mb
Running examples in 'fhircrackr-Ex.R' failed
The error most likely occurred in:

> ### Name: fhir_common_columns
> ### Title: Find common columns
> ### Aliases: fhir_common_columns
> 
> ### ** Examples
> 
> #unserialize example bundles
> bundles <- fhir_unserialize(medication_bundles)
> 
> #crack Patient Resources
> design <- list(
+   Patients = list(".//Patient")
+ )
> 
> dfs <- fhir_crack(bundles, design)

 Patients
 1....................Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: fhir_crack ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'fhircrackr.Rmd' using rmarkdown
Quitting from lines 87-99 (fhircrackr.Rmd) 
Error: processing vignette 'fhircrackr.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'fhircrackr.Rmd'

SUMMARY: processing the following file failed:
  'fhircrackr.Rmd'

Error: Vignette re-building failed.
Execution halted
Error(s) in re-building vignettes:
--- re-building 'fic.Rnw' using knitr
--- finished re-building 'fic.Rnw'

--- re-building 'linear.Rnw' using knitr
`stat_bin()` using `bins = 30`. Pick better value with `binwidth`.
`stat_bin()` using `bins = 30`. Pick better value with `binwidth`.
`stat_bin()` using `bins = 30`. Pick better value with `binwidth`.
`stat_bin()` using `bins = 30`. Pick better value with `binwidth`.
`stat_bin()` using `bins = 30`. Pick better value with `binwidth`.
--- finished re-building 'linear.Rnw'

--- re-building 'loss.Rnw' using knitr
--- finished re-building 'loss.Rnw'

--- re-building 'multistate.Rnw' using knitr
--- finished re-building 'multistate.Rnw'

--- re-building 'skewnormal.Rnw' using knitr
Warning in nlm(fn1, ini[c("beta0", "logsigma")], hessian = TRUE) :
  NA/Inf replaced by maximum positive value
Warning in nlm(fn3, ini[c("beta0", "logsigma", "loglambda")], hessian = TRUE) :
  NA/Inf replaced by maximum positive value
--- finished re-building 'skewnormal.Rnw'

--- re-building 'survival.Rnw' using knitr
Quitting from lines 46-52 (survival.Rnw) 
Error: processing vignette 'survival.Rnw' failed with diagnostics:
The `flexsurv` package should be installed
to run code in this vignette
--- failed re-building 'survival.Rnw'

SUMMARY: processing the following file failed:
  'survival.Rnw'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fieldRS.Rcheck/00install.out' for details.
fieldsim: no visible global function definition for 'rnorm'
midpoint: no visible global function definition for 'rnorm'
setAtlas_under: no visible global function definition for 'runif'
setCovf_under : Ibeta: no visible global function definition for
  'pbeta'
visualize: no visible global function definition for 'colorRampPalette'
Undefined global functions or variables:
  colorRampPalette pbeta rnorm runif
Consider adding
  importFrom("grDevices", "colorRampPalette")
  importFrom("stats", "pbeta", "rnorm", "runif")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
Packages listed in more than one of Depends, Imports, Suggests, Enhances:
  'filehash' 'DBI'
A package should be listed in only one of these fields.
Packages in Depends field not imported from:
  'RSQLite' 'methods'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
createSQLite: no visible global function definition for 'dbDriver'
createSQLite: no visible global function definition for 'dbConnect'
createSQLite: no visible global function definition for
  'dbUnloadDriver'
createSQLite: no visible global function definition for 'dbGetQuery'
initializeSQLite: no visible global function definition for 'dbDriver'
initializeSQLite: no visible global function definition for 'dbConnect'
initializeSQLite: no visible global function definition for 'new'
dbDelete,filehashSQLite-character: no visible global function
  definition for 'dbGetQuery'
dbDisconnect,filehashSQLite: no visible global function definition for
  'dbUnloadDriver'
dbFetch,filehashSQLite-character: no visible global function definition
  for 'dbGetQuery'
dbInsert,filehashSQLite-character: no visible global function
  definition for 'dbGetQuery'
dbList,filehashSQLite: no visible global function definition for
  'dbGetQuery'
dbMultiFetch,filehashSQLite-character: no visible global function
  definition for 'dbGetQuery'
Undefined global functions or variables:
  dbConnect dbDriver dbGetQuery dbUnloadDriver new
Consider adding
  importFrom("methods", "new")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/finalfit.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/finch.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fingerPro.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fingertipscharts.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/finreportr.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
installed size is  7.6Mb
  sub-directories of 1Mb or more:
    data   5.3Mb
    libs   2.2Mb
Error(s) in re-building vignettes:
--- re-building 'Using_fishdata.Rmd' using rmarkdown
Quitting from lines 24-29 (Using_fishdata.Rmd) 
Error: processing vignette 'Using_fishdata.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'Using_fishdata.Rmd'

SUMMARY: processing the following file failed:
  'Using_fishdata.Rmd'

Error: Vignette re-building failed.
Execution halted
'library' or 'require' call to 'tkrplot' which was already attached by Depends.
  Please remove these calls from your code.
Packages in Depends field not imported from:
  'methods' 'tkrplot'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fishflux.Rcheck/00install.out' for details.
lsmacof: no visible global function definition for 'cmdscale'
plotInc: no visible global function definition for 'rainbow'
prepareCalib: no visible global function definition for 'lm'
Undefined global functions or variables:
  cmdscale lm rainbow
Consider adding
  importFrom("grDevices", "rainbow")
  importFrom("stats", "cmdscale", "lm")
to your NAMESPACE file.
fishmove : coefs: no visible global function definition for 'coef'
fishmove : coefs: no visible global function definition for 'pf'
fishmove: no visible global function definition for 'lm'
fishmove: no visible global function definition for 'predict.lm'
fishmove.estimate: no visible global function definition for 'quantile'
fishmove.estimate : ddoublenorm: no visible global function definition
  for 'dnorm'
fishmove.query: no visible global function definition for 'hasArg'
fishmove.query : f: no visible global function definition for 'pnorm'
fishmove.query: no visible global function definition for 'uniroot'
pdk: no visible global function definition for 'hasArg'
pdk : eq: no visible global function definition for 'dnorm'
Undefined global functions or variables:
  coef dnorm hasArg lm pf pnorm predict.lm quantile uniroot
Consider adding
  importFrom("methods", "hasArg")
  importFrom("stats", "coef", "dnorm", "lm", "pf", "pnorm", "predict.lm",
             "quantile", "uniroot")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for 'FishResp' in inDL(x, as.logical(local), as.logical(now), ...):
 unable to load shared object 'd:/RCompile/CRANpkg/lib/4.0/dplyr/libs/x64/dplyr.dll':
  LoadLibrary failure:  Das angegebene Modul wurde nicht gefunden.
Execution halted
Error(s) in re-building vignettes:
--- re-building 'community-analysis.Rmd' using rmarkdown
--- finished re-building 'community-analysis.Rmd'

--- re-building 'comparative-analysis.Rmd' using rmarkdown
Quitting from lines 41-48 (comparative-analysis.Rmd) 
Error: processing vignette 'comparative-analysis.Rmd' failed with diagnostics:
package or namespace load failed for 'rfishbase' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'comparative-analysis.Rmd'

SUMMARY: processing the following file failed:
  'comparative-analysis.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fishualize.Rcheck/00install.out' for details.
Package in Depends field not imported from: 'FitAR'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
FitARMA: no visible global function definition for 'PacfDL'
FitARMA: no visible global function definition for 'GetARMeanMLE'
FitARMA: no visible global function definition for
  'BackcastResidualsAR'
FitARMA: no visible global function definition for 'LjungBoxTest'
GetFitARMA: no visible global function definition for 'LoglikelihoodAR'
GetFitARMA: no visible global function definition for 'ChampernowneD'
GetFitARMA : EntropyARMA: no visible global function definition for
  'PacfToAR'
GetFitARMA : EntropyARMA: no visible global function definition for
  'PacfDL'
GetFitARMA : EntropyARMA: no visible global function definition for
  'FastLoglikelihoodAR'
GetFitARMA: no visible global function definition for 'PacfToAR'
InformationMatrixARMA: no visible global function definition for
  'InvertibleQ'
TacvfARMA: no visible global function definition for 'InvertibleQ'
Undefined global functions or variables:
  BackcastResidualsAR ChampernowneD FastLoglikelihoodAR GetARMeanMLE
  InvertibleQ LjungBoxTest LoglikelihoodAR PacfDL PacfToAR
Packages listed in more than one of Depends, Imports, Suggests, Enhances:
  'lattice' 'leaps' 'ltsa'
A package should be listed in only one of these fields.
Package in Depends field not imported from: 'bestglm'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Package suggested but not available for checking: 'ExtDist'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fitteR.Rcheck/00install.out' for details.
Packages suggested but not available for checking: 'doMC', 'RSvgDevice'
'library' or 'require' calls in package code:
  'devEMF' 'doMC' 'foreach' 'grDevices'
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Running 'spelling.R' [0s]
  Running 'testthat.R' [2s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(fitzRoy) # nolint
  > 
  > test_check("fitzRoy")
  -- 1. Error: replace_teams returns corrected teams (@test-afltables_player.R#58)
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. testthat::expect_equal(replace_teams("A"), "A")
    4. fitzRoy::replace_teams("A")
    5. dplyr::case_when
    6. base::getExportedValue(pkg, name)
    7. base::asNamespace(ns)
    8. base::getNamespace(ns)
    9. base::loadNamespace(name)
   10. base::library.dynam(lib, package, package.lib)
  
  -- 2. Error: replace_venues returns corrected venues (@test-afltables_player.R#6
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. testthat::expect_equal(replace_venues("A"), "A")
    4. fitzRoy::replace_venues("A")
    5. dplyr::case_when
    6. base::getExportedValue(pkg, name)
    7. base::asNamespace(ns)
    8. base::getNamespace(ns)
    9. base::loadNamespace(name)
   10. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 0 | SKIPPED: 27 | WARNINGS: 0 | FAILED: 2 ]
  1. Error: replace_teams returns corrected teams (@test-afltables_player.R#58) 
  2. Error: replace_venues returns corrected venues (@test-afltables_player.R#66) 
  
  Error: testthat unit tests failed
  Execution halted
Package suggested but not available for checking: 'fivethirtyeightdata'
Package unavailable to check Rd xrefs: 'fivethirtyeightdata'
Running examples in 'fivethirtyeight-Ex.R' failed
The error most likely occurred in:

> ### Name: ahca_polls
> ### Title: American Health Care Act Polls
> ### Aliases: ahca_polls
> ### Keywords: datasets
> 
> ### ** Examples
> 
> # To convert data frame to tidy data (long) format, run:
> library(dplyr)
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Error(s) in re-building vignettes:
--- re-building 'fivethirtyeight.Rmd' using rmarkdown
Some larger datasets need to be installed separately, like senators and
house_district_forecast. To install these, we recommend you install the
fivethirtyeightdata package by running:
install.packages('fivethirtyeightdata', repos =
'https://fivethirtyeightdata.github.io/drat/', type = 'source')
Quitting from lines 13-63 (fivethirtyeight.Rmd) 
Error: processing vignette 'fivethirtyeight.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'fivethirtyeight.Rmd'

--- re-building 'tame.Rmd' using rmarkdown
Some larger datasets need to be installed separately, like senators and
house_district_forecast. To install these, we recommend you install the
fivethirtyeightdata package by running:
install.packages('fivethirtyeightdata', repos =
'https://fivethirtyeightdata.github.io/drat/', type = 'source')

Attaching package: 'ggplot2'

The following object is masked _by_ '.GlobalEnv':

    scale_fill_discrete

Quitting from lines 27-35 (tame.Rmd) 
Error: processing vignette 'tame.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'tame.Rmd'

--- re-building 'user_contributed_vignettes.Rmd' using rmarkdown
--- finished re-building 'user_contributed_vignettes.Rmd'

SUMMARY: processing the following files failed:
  'fivethirtyeight.Rmd' 'tame.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fixerapi.Rcheck/00install.out' for details.
installed size is  7.0Mb
  sub-directories of 1Mb or more:
    doc    2.8Mb
    libs   2.8Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/flacco.Rcheck/00install.out' for details.
Running examples in 'flagr-Ex.R' failed
The error most likely occurred in:

> ### Name: flag_divide
> ### Title: Assignment of the weights for the multiple flags
> ### Aliases: flag_divide
> 
> ### ** Examples
> 
> flags <- tidyr::spread(test_data[, c(1:3)], key = time, value = flags)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: :: ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'flagr_introduction.Rmd' using rmarkdown
Quitting from lines 85-89 (flagr_introduction.Rmd) 
Error: processing vignette 'flagr_introduction.Rmd' failed with diagnostics:
package or namespace load failed for 'tidyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'flagr_introduction.Rmd'

SUMMARY: processing the following file failed:
  'flagr_introduction.Rmd'

Error: Vignette re-building failed.
Execution halted
Error(s) in re-building vignettes:
--- re-building 'how_to_flair.Rmd' using rmarkdown
Quitting from lines 18-21 (how_to_flair.Rmd) 
Error: processing vignette 'how_to_flair.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'how_to_flair.Rmd'

SUMMARY: processing the following file failed:
  'how_to_flair.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'FLAME-Ex.R' failed
The error most likely occurred in:

> ### Name: FLAME
> ### Title: Bit Vectors Implementation of FLAME
> ### Aliases: FLAME
> 
> ### ** Examples
> 
> data <- gen_data()
> holdout <- gen_data()
> FLAME_out <- FLAME(data = data, holdout = holdout)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: FLAME ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'FLAME_overview.Rmd' using rmarkdown
Quitting from lines 20-21 (FLAME_overview.Rmd) 
Error: processing vignette 'FLAME_overview.Rmd' failed with diagnostics:
Dependency package(s) 'dplyr','mice','tidyr' not available.
--- failed re-building 'FLAME_overview.Rmd'

SUMMARY: processing the following file failed:
  'FLAME_overview.Rmd'

Error: Vignette re-building failed.
Execution halted
installed size is  7.0Mb
  sub-directories of 1Mb or more:
    doc    1.9Mb
    help   2.3Mb
    libs   2.5Mb
Malformed Description field: should contain one or more complete sentences.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/flashlight.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/flatr.Rcheck/00install.out' for details.
Running examples in 'flattabler-Ex.R' failed
The error most likely occurred in:

> ### Name: define_labels
> ### Title: Define the quantity of rows and columns that contain labels
> ### Aliases: define_labels define_labels.pivot_table
> 
> ### ** Examples
> 
> library(tidyr)
Error: package or namespace load failed for 'tidyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Error(s) in re-building vignettes:
--- re-building 'flattabler.Rmd' using rmarkdown
Quitting from lines 57-71 (flattabler.Rmd) 
Error: processing vignette 'flattabler.Rmd' failed with diagnostics:
package or namespace load failed for 'tidyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'flattabler.Rmd'

SUMMARY: processing the following file failed:
  'flattabler.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/flexCWM.Rcheck/00install.out' for details.
Package vignette with placeholder title 'Vignette Title':
  'fmp.Rmd'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/flexsurv.Rcheck/00install.out' for details.
Package vignette with placeholder title 'Vignette Title':
  'introduction.Rmd'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/flightplot.Rcheck/00install.out' for details.
Running 'testthat.R' [1s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(ggmap)
  Loading required package: ggplot2
  Error: package or namespace load failed for 'ggmap' in inDL(x, as.logical(local), as.logical(now), ...):
   unable to load shared object 'D:/temp/RtmpgDkLky/RLIBS_1f32c34525112/dplyr/libs/x64/dplyr.dll':
    LoadLibrary failure:  Das angegebene Modul wurde nicht gefunden.
  Execution halted
installed size is  9.8Mb
  sub-directories of 1Mb or more:
    libs   8.8Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/flora.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/florestal.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/flowDiv.Rcheck/00install.out' for details.
RIind: no visible global function definition for 'aggregate'
RIind: no visible binding for global variable 'sd'
RIpop: no visible global function definition for 'aggregate'
RIpop: no visible binding for global variable 'sd'
SI: no visible global function definition for 'sd'
SI2: no visible global function definition for 'sd'
SI3: no visible global function definition for 'aggregate'
SI3: no visible global function definition for 'pairs'
SI3: no visible global function definition for 'cor'
SI4: no visible global function definition for 'aggregate'
SI4: no visible global function definition for 'sd'
fCV: no visible global function definition for 'sd'
Undefined global functions or variables:
  aggregate cor pairs sd
Consider adding
  importFrom("graphics", "pairs")
  importFrom("stats", "aggregate", "cor", "sd")
to your NAMESPACE file.
Malformed Title field: should not end in a period.
'library' or 'require' call to 'stats' in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
GCV: no visible global function definition for 'lm'
GCV: no visible global function definition for 'resid'
ffplot: no visible global function definition for 'par'
ffplot: no visible global function definition for 'points'
ffplot: no visible global function definition for 'legend'
flowfield: no visible global function definition for 'write.table'
gpr: no visible global function definition for 'quantile'
gpr: no visible global function definition for 'var'
smoothp: no visible global function definition for 'lm'
smoothp: no visible global function definition for 'predict'
smoothp: no visible global function definition for 'resid'
smoothp: no visible global function definition for 'optimize'
Undefined global functions or variables:
  legend lm optimize par points predict quantile resid var write.table
Consider adding
  importFrom("graphics", "legend", "par", "points")
  importFrom("stats", "lm", "optimize", "predict", "quantile", "resid",
             "var")
  importFrom("utils", "write.table")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
GNU make is a SystemRequirements.
Malformed Description field: should contain one or more complete sentences.
prepare_Rd: Flury-package.Rd:37-39: Dropping empty section \examples
prepare_Rd: apples.Rd:19-21: Dropping empty section \details
prepare_Rd: basketball.Rd:28-29: Dropping empty section \references
prepare_Rd: challenger.Rd:18-20: Dropping empty section \details
prepare_Rd: computers.Rd:16-18: Dropping empty section \details
prepare_Rd: cork.Rd:19-20: Dropping empty section \details
prepare_Rd: dead.beetles.Rd:17-19: Dropping empty section \details
prepare_Rd: deer.Rd:14-16: Dropping empty section \details
prepare_Rd: dogwood.Rd:22-24: Dropping empty section \details
prepare_Rd: f.twins.Rd:23-25: Dropping empty section \details
prepare_Rd: flea.beetles.Rd:22-24: Dropping empty section \details
prepare_Rd: ghq.Rd:25-27: Dropping empty section \details
prepare_Rd: lookup.Rd:15-17: Dropping empty section \details
prepare_Rd: lookup.Rd:18-20: Dropping empty section \source
prepare_Rd: m.twins.Rd:24-26: Dropping empty section \details
prepare_Rd: mumps.Rd:14-16: Dropping empty section \details
prepare_Rd: pipits.Rd:17-19: Dropping empty section \details
prepare_Rd: pipits2.Rd:18-19: Dropping empty section \details
prepare_Rd: robustus.Rd:17-19: Dropping empty section \details
prepare_Rd: sibling.heads.Rd:18-20: Dropping empty section \details
prepare_Rd: snailsf.Rd:25-27: Dropping empty section \details
prepare_Rd: steve.Rd:19-20: Dropping empty section \details
prepare_Rd: steve.Rd:26-27: Dropping empty section \references
prepare_Rd: turtles.Rd:19: Dropping empty section \details
prepare_Rd: vasoc.Rd:18-20: Dropping empty section \details
prepare_Rd: wine.sugar.Rd:22-24: Dropping empty section \details
export: no visible global function definition for 'write.table'
flux.odae : <anonymous>: no visible global function definition for
  'combn'
mf.flux: no visible global function definition for 'runsd'
plot.fluss: no visible global function definition for 'dev.new'
plot.fluss: no visible global function definition for 'pdf'
plot.fluss: no visible global function definition for 'dev.off'
plot.fluxes: no visible global function definition for 'dev.new'
plot.fluxes: no visible global function definition for 'devAskNewPage'
plot.fluxes: no visible global function definition for 'pdf'
plot.fluxes: no visible global function definition for 'dev.off'
plot.fluxxes: no visible global function definition for 'dev.new'
plot.fluxxes: no visible global function definition for 'devAskNewPage'
plot.fluxxes: no visible global function definition for 'pdf'
plot.fluxxes: no visible global function definition for 'dev.off'
reco.bulk : get.out: no visible global function definition for
  'boxplot.stats'
Undefined global functions or variables:
  boxplot.stats combn dev.new dev.off devAskNewPage pdf runsd
  write.table
Consider adding
  importFrom("grDevices", "boxplot.stats", "dev.new", "dev.off",
             "devAskNewPage", "pdf")
  importFrom("utils", "combn", "write.table")
to your NAMESPACE file.
Error(s) in re-building vignettes:
--- re-building 'fma-vignette.Rmd' using rmarkdown
Quitting from lines 16-22 (fma-vignette.Rmd) 
Error: processing vignette 'fma-vignette.Rmd' failed with diagnostics:
package or namespace load failed for 'tidyverse' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'fma-vignette.Rmd'

SUMMARY: processing the following file failed:
  'fma-vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fmriqa.Rcheck/00install.out' for details.
BSOptionValue: no visible global function definition for 'pnorm'
ImpliedVol: no visible global function definition for 'uniroot'
callFMstable: no visible global function definition for 'integrate'
fitGivenQuantile: no visible global function definition for 'uniroot'
matchQuartiles: no visible global function definition for 'optim'
putFMstable: no visible global function definition for 'integrate'
standardStableQuantile: no visible global function definition for
  'qnorm'
tailsGstable: no visible global function definition for 'integrate'
Undefined global functions or variables:
  integrate optim pnorm qnorm uniroot
Consider adding
  importFrom("stats", "integrate", "optim", "pnorm", "qnorm", "uniroot")
to your NAMESPACE file.
S3 methods shown with full name in documentation object 'predict.foba':
  'predict.foba'

S3 methods shown with full name in documentation object 'print.foba':
  'print.foba'

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/foieGras.Rcheck/00install.out' for details.
installed size is  6.6Mb
  sub-directories of 1Mb or more:
    fonts   6.6Mb
Malformed Description field: should contain one or more complete sentences.
installed size is  6.1Mb
  sub-directories of 1Mb or more:
    fonts   6.1Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/foodingraph.Rcheck/00install.out' for details.
'library' or 'require' call to 'rgl' which was already attached by Depends.
  Please remove these calls from your code.
Error(s) in re-building vignettes:
--- re-building 'forcats.Rmd' using rmarkdown
Quitting from lines 23-26 (forcats.Rmd) 
Error: processing vignette 'forcats.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'forcats.Rmd'

SUMMARY: processing the following file failed:
  'forcats.Rmd'

Error: Vignette re-building failed.
Execution halted
Package suggested but not available for checking: 'doMC'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/forecastML.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ForecastTB.Rcheck/00install.out' for details.
BugReports field is not a suitable URL but contains an email address:
   use the Contact field instead
Malformed Description field: should contain one or more complete sentences.
'library' or 'require' calls to packages already attached by Depends:
  'combinat' 'genetics'
  Please remove these calls from your code.
NB: .First.lib is obsolete and will not be used in R >= 3.0.0
File 'forensic/R/zzz.R':
  .First.lib calls:
    cat("## Statistical Methods in Forensic Genetics \n")
    cat("## The work was supported by the project 1M06014 of the Ministry of \n        Education, Youth and Sports of the Czech Republic. \n")
    require(genetics, quietly = TRUE)
    require(combinat, quietly = TRUE)

Package startup functions should not change the search path.
Package startup functions should use 'packageStartupMessage' to
  generate messages.
See section 'Good practice' in '?.onAttach'.
Malformed Description field: should contain one or more complete sentences.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/forestChange.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/forestControl.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/forestinventory.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/forestmodel.Rcheck/00install.out' for details.
Running examples in 'forestr-Ex.R' failed
The error most likely occurred in:

> ### Name: process_pcl
> ### Title: Process single PCL transects.
> ### Aliases: process_pcl
> ### Keywords: pcl processing
> 
> ### ** Examples
> 
> 
> # Run process complete PCL transect without storing to disk
> uva.pcl <- system.file("extdata", "UVAX_A4_01W.csv", package = "forestr")
> 
> process_pcl(uva.pcl, marker.spacing = 10, user_height = 1.05,
+ max.vai = 8, pavd = FALSE, hist = FALSE, save_output = FALSE)
how many in base df have NA
[1] 253
Transect Length
[1] 40
Table of sky hits

FALSE  TRUE 
14323   253 
Intensity Statistics
Mean Intensity
[1] 81.19242
Median Intensity
[1] 83
Standard Deviation of Intensity
[1] 15.08965
Max intensity
[1] 126
Minimum intensity
[1] 8
Intensity Skewness
[1] -0.8123838
Intensity Kurtosis
[1] 4.636563
RAW LiDAR metrics -- WARNING
Mean Return Height (m) of raw data
[1] 9.114691
Standard Deviation of raw  Canopy Height returns-- meanStd in old code
[1] 5.130027
Median of raw  Canopy Height returns
[1] 7.8185
Max Measured Canopy Height (m)
[1] 26.511
Scan Density
[1] 364.4
OPENNESS AND COVER METRICS
Sky Fraction (%)
[1] 1.736326
Cover Fraction (%)
[1] 98.26367
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: process_pcl ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Malformed Description field: should contain one or more complete sentences.
ForImp: no visible global function definition for 'head'
ForImp: no visible global function definition for 'tail'
ForImp: no visible global function definition for 'dist'
medianimp: no visible global function definition for 'quantile'
rancatmat: no visible global function definition for 'runif'
transfmatcat: no visible global function definition for 'qnorm'
transfmatcat: no visible global function definition for 'sd'
Undefined global functions or variables:
  dist head qnorm quantile runif sd tail
Consider adding
  importFrom("stats", "dist", "qnorm", "quantile", "runif", "sd")
  importFrom("utils", "head", "tail")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
INFCvpe: no visible binding for global variable 'INFCstats'
INFCvpe: no visible binding for global variable 'INFCdomain'
Undefined global functions or variables:
  INFCdomain INFCstats
Warning: no function found corresponding to methods exports from 'FormalSeries' for: 'initialize', 'show'

A namespace must be able to be loaded with just the base namespace
loaded: otherwise if the namespace gets loaded by a saved object, the
session will be unable to start.

Probably some imports need to be declared in the NAMESPACE file.
Package in Depends field not imported from: 'methods'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
&,fseries-numeric: no visible global function definition for 'new'
*,fseries-fseries: no visible global function definition for 'new'
*,fseries-numeric: no visible global function definition for 'new'
*,numeric-fseries: no visible global function definition for 'new'
+,fseries-fseries: no visible global function definition for 'new'
+,fseries-numeric: no visible global function definition for 'new'
+,numeric-fseries: no visible global function definition for 'new'
-,fseries-ANY: no visible global function definition for 'new'
-,fseries-numeric: no visible global function definition for 'new'
-,numeric-fseries: no visible global function definition for 'new'
/,fseries-numeric: no visible global function definition for 'new'
[<-,fseries-matrix-missing-matrix: no visible global function
  definition for 'new'
[<-,fseries-numeric-missing-numeric: no visible global function
  definition for 'new'
initialize,fseries: no visible global function definition for
  'validObject'
rfseries,numeric-numeric-numeric: no visible global function definition
  for 'runif'
rfseries,numeric-numeric-numeric: no visible global function definition
  for 'rbinom'
rfseries,numeric-numeric-numeric: no visible global function definition
  for 'new'
Undefined global functions or variables:
  new rbinom runif validObject
Consider adding
  importFrom("methods", "new", "validObject")
  importFrom("stats", "rbinom", "runif")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
ForwardSearch.fit: no visible global function definition for 'glm.fit'
ForwardSearch.plot: no visible global function definition for 'lines'
ForwardSearch.pointwise.asymptotics: no visible global function
  definition for 'qnorm'
ForwardSearch.pointwise.asymptotics: no visible global function
  definition for 'dnorm'
Undefined global functions or variables:
  dnorm glm.fit lines qnorm
Consider adding
  importFrom("graphics", "lines")
  importFrom("stats", "dnorm", "glm.fit", "qnorm")
to your NAMESPACE file.
Error(s) in re-building vignettes:
--- re-building 'Overview.Rmd' using rmarkdown
Quitting from lines 25-33 (Overview.Rmd) 
Error: processing vignette 'Overview.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'Overview.Rmd'

SUMMARY: processing the following file failed:
  'Overview.Rmd'

Error: Vignette re-building failed.
Execution halted
Error(s) in re-building vignettes:
--- re-building 'fourierin_details.Rmd' using rmarkdown
Quitting from lines 50-83 (fourierin_details.Rmd) 
Error: processing vignette 'fourierin_details.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'fourierin_details.Rmd'

SUMMARY: processing the following file failed:
  'fourierin_details.Rmd'

Error: Vignette re-building failed.
Execution halted
Malformed Description field: should contain one or more complete sentences.
GenObs: no visible global function definition for 'rnorm'
GenObs.T: no visible global function definition for 'rt'
MeasL: no visible global function definition for 'rbeta'
OutDet: no visible global function definition for 'median'
RanCur: no visible global function definition for 'rnorm'
init: no visible global function definition for 'prcomp'
Undefined global functions or variables:
  median prcomp rbeta rnorm rt
Consider adding
  importFrom("stats", "median", "prcomp", "rbeta", "rnorm", "rt")
to your NAMESPACE file.
Packages suggested but not available for checking:
  'Rsocp', 'Rnlminb2', 'Rdonlp2'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fpp3.Rcheck/00install.out' for details.
'library' or 'require' calls in package code:
  'pcaPP' 'snowFT' 'wavelets'
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
ComputeDCT2FFT: no visible global function definition for 'fft'
ComputeSemipgramFFT: no visible global function definition for 'fft'
WaveVarFD: no visible global function definition for 'modwt'
do.fd.estimate: no visible global function definition for
  'performParallel'
do.fd.estimate2d.simple: no visible global function definition for
  'median'
fd.Genton: no visible global function definition for 'qn'
fd.estimate.matrix: no visible global function definition for
  'performParallel'
fd.plot.legend: no visible global function definition for 'legend'
fd.plot.loglog: no visible global function definition for 'points'
fd.plot.loglog: no visible global function definition for 'abline'
summary.FractalDim: no visible binding for global variable 'sd'
Undefined global functions or variables:
  abline fft legend median modwt performParallel points qn sd
Consider adding
  importFrom("graphics", "abline", "legend", "points")
  importFrom("stats", "fft", "median", "sd")
to your NAMESPACE file.
Running examples in 'fractional-Ex.R' failed
The error most likely occurred in:

> ### Name: numerical
> ### Title: Convert a fractional object to the equivalent numeric object
> ### Aliases: numerical numerical.charFrac numerical.default
> ###   numerical.fractional
> 
> ### ** Examples
> 
> suppressPackageStartupMessages(library(dplyr))
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Error(s) in re-building vignettes:
--- re-building 'Theory.Rmd' using rmarkdown
Quitting from lines 18-26 (Theory.Rmd) 
Error: processing vignette 'Theory.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'Theory.Rmd'

--- re-building 'Vulgar_Fractions_in_R.Rmd' using rmarkdown
Quitting from lines 45-48 (Vulgar_Fractions_in_R.Rmd) 
Error: processing vignette 'Vulgar_Fractions_in_R.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'Vulgar_Fractions_in_R.Rmd'

SUMMARY: processing the following files failed:
  'Theory.Rmd' 'Vulgar_Fractions_in_R.Rmd'

Error: Vignette re-building failed.
Execution halted
'library' or 'require' calls to packages already attached by Depends:
  'CCP' 'MASS' 'calibrate' 'corpcor'
  Please remove these calls from your code.
Packages in Depends field not imported from:
  'CCP' 'MASS' 'calibrate' 'corpcor'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
custom.draw.circle: no visible global function definition for 'lines'
frcc: no visible binding for global variable 'sd'
frcc: no visible global function definition for 'cor.shrink'
frcc: no visible global function definition for 'cor'
frcc: no visible global function definition for 'p.asym'
generate_multivariate_normal_sample: no visible global function
  definition for 'mvrnorm'
plot_units: no visible binding for global variable 'sd'
plot_units: no visible global function definition for 'points'
plot_units: no visible global function definition for 'textxy'
plot_variables: no visible global function definition for 'points'
plot_variables: no visible global function definition for 'textxy'
plot_variables: no visible global function definition for 'segments'
Undefined global functions or variables:
  cor cor.shrink lines mvrnorm p.asym points sd segments textxy
Consider adding
  importFrom("graphics", "lines", "points", "segments")
  importFrom("stats", "cor", "sd")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/FreeSortR.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/freqtables.Rcheck/00install.out' for details.
installed size is  5.3Mb
  sub-directories of 1Mb or more:
    doc    1.4Mb
    libs   3.0Mb
PKG_CFLAGS set in 'src/Makevars' without any corresponding files
   PKG_CFLAGS set in 'src/Makevars.win' without any corresponding files
installed size is  5.7Mb
  sub-directories of 1Mb or more:
    R   5.7Mb
Package in Depends field not imported from: 'FrF2'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Package suggested but not available for checking: 'dggrids'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/FRK.Rcheck/00install.out' for details.
Packages in Depends field not imported from:
  'Rmpfr' 'partitions'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Bell : nways: no visible global function definition for 'setparts'
Bell: no visible global function definition for 'restrictedparts'
CalIncLapInt : Deriv: no visible global function definition for 'D'
CalIncLapInt: no visible global function definition for 'is.whole'
CalIncLapInt: no visible global function definition for 'mpfr'
CalIncLapInt: no visible global function definition for 'chooseMpfr'
derivErfc : Deriv: no visible global function definition for 'D'
derivErfc : Erfc: no visible global function definition for 'pnorm'
Undefined global functions or variables:
  D chooseMpfr is.whole mpfr pnorm restrictedparts setparts
Consider adding
  importFrom("stats", "D", "pnorm")
to your NAMESPACE file.
installed size is  8.3Mb
  sub-directories of 1Mb or more:
    libs   7.9Mb
ROCscore: no visible global function definition for 'par'
ROCscore: no visible global function definition for 'axis'
ROCscore: no visible global function definition for 'mtext'
ROCscore: no visible global function definition for 'legend'
alphafrontier.2d: no visible global function definition for 'par'
alphafrontier.2d: no visible global function definition for 'polygon'
alphafrontier.2d: no visible global function definition for 'lines'
alphafrontier.2d: no visible global function definition for 'points'
alphafrontier.3d: no visible global function definition for 'layout'
alphafrontier.3d: no visible global function definition for 'barplot'
alphafrontier.3d: no visible global function definition for 'axis'
alphafrontier.3d: no visible global function definition for 'lines'
alphafrontier.3d: no visible global function definition for 'na.omit'
ordermfrontier.2d: no visible global function definition for 'par'
ordermfrontier.2d: no visible global function definition for 'polygon'
ordermfrontier.2d: no visible global function definition for 'lines'
ordermfrontier.2d: no visible global function definition for 'points'
ordermscore.boot: no visible global function definition for 'sd'
Undefined global functions or variables:
  axis barplot layout legend lines mtext na.omit par points polygon sd
Consider adding
  importFrom("graphics", "axis", "barplot", "layout", "legend", "lines",
             "mtext", "par", "points", "polygon")
  importFrom("stats", "na.omit", "sd")
to your NAMESPACE file.
Package vignette with placeholder title 'Vignette Title':
  'Introduction.Rmd'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/frostr.Rcheck/00install.out' for details.
prepare_Rd: frt.Rd:21: Dropping empty section \note
prepare_Rd: frt.paired.Rd:23: Dropping empty section \note
prepare_Rd: shoes.Rd:19: Dropping empty section \details
prepare_Rd: shoes.Rd:21-22: Dropping empty section \references
prepare_Rd: tomatoes.Rd:16: Dropping empty section \details
prepare_Rd: tomatoes.Rd:18: Dropping empty section \references
Running examples in 'FSA-Ex.R' failed
The error most likely occurred in:

> ### Name: Subset
> ### Title: Subsets/filters a data frame and drops the unused levels.
> ### Aliases: Subset filterD
> ### Keywords: misc
> 
> ### ** Examples
> 
> ## The problem -- note use of unused level in the final table.
> levels(iris$Species)
[1] "setosa"     "versicolor" "virginica" 
> iris.set1 <- subset(iris,Species=="setosa" | Species=="versicolor")
> levels(iris.set1$Species)
[1] "setosa"     "versicolor" "virginica" 
> xtabs(~Species,data=iris)
Species
    setosa versicolor  virginica 
        50         50         50 
> 
> ## A simpler fix using Subset
> iris.set2 <- Subset(iris,Species=="setosa" | Species=="versicolor")
> levels(iris.set2$Species)
[1] "setosa"     "versicolor"
> xtabs(~Species,data=iris.set2)
Species
    setosa versicolor 
        50         50 
> 
> ## A simpler fix using filterD
> iris.set3 <- filterD(iris,Species=="setosa" | Species=="versicolor")
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: filterD ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fscaret.Rcheck/00install.out' for details.
Running 'testthat.R' [3s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(FSelectorRcpp)
  > library(Matrix)
  > library(Rcpp)
  > library(RcppArmadillo)
  > library(dplyr)
  Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'benchmarks_discretize.Rmd' using rmarkdown
--- finished re-building 'benchmarks_discretize.Rmd'

--- re-building 'get_started.Rmd' using rmarkdown
Warning: glm.fit: algorithm did not converge
Warning: glm.fit: fitted probabilities numerically 0 or 1 occurred
--- finished re-building 'get_started.Rmd'

--- re-building 'integer-variables.Rmd' using rmarkdown
Quitting from lines 62-83 (integer-variables.Rmd) 
Error: processing vignette 'integer-variables.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'integer-variables.Rmd'

SUMMARY: processing the following file failed:
  'integer-variables.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/FSinR.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/FSK2R.Rcheck/00install.out' for details.
GNU make is a SystemRequirements.
Running examples in 'ftExtra-Ex.R' failed
The error most likely occurred in:

> ### Name: as_flextable_methods
> ### Title: method to convert object to flextable
> ### Aliases: as_flextable_methods as_flextable.grouped_df
> ###   as_flextable.data.frame
> 
> ### ** Examples
> 
> 
> # For grouped_df
> grouped_df <- iris %>% dplyr::group_by(Species) %>% dplyr::slice(1, 2)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: %>% ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'format_columns.Rmd' using rmarkdown
Quitting from lines 28-36 (format_columns.Rmd) 
Error: processing vignette 'format_columns.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'format_columns.Rmd'

--- re-building 'group-rows.Rmd' using rmarkdown
Quitting from lines 20-22 (group-rows.Rmd) 
Error: processing vignette 'group-rows.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'group-rows.Rmd'

--- re-building 'transform-headers.Rmd' using rmarkdown
Quitting from lines 35-36 (transform-headers.Rmd) 
Error: processing vignette 'transform-headers.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'transform-headers.Rmd'

SUMMARY: processing the following files failed:
  'format_columns.Rmd' 'group-rows.Rmd' 'transform-headers.Rmd'

Error: Vignette re-building failed.
Execution halted
'library' or 'require' calls to packages already attached by Depends:
  'Matrix' 'splines'
  Please remove these calls from your code.
prepare_Rd: baseline.Rd:123: Dropping empty section \examples
prepare_Rd: display.tests.Rd:43: Dropping empty section \references
prepare_Rd: display.tests.Rd:57: Dropping empty section \examples
prepare_Rd: extract.pars.Rd:114: Dropping empty section \examples
prepare_Rd: locate.peaks.Rd:72: Dropping empty section \examples
prepare_Rd: make.par.file.Rd:117: Dropping empty section \examples
prepare_Rd: run.all.Rd:76: Dropping empty section \examples
prepare_Rd: run.analysis.Rd:153: Dropping empty section \examples
prepare_Rd: run.baselines.Rd:91: Dropping empty section \examples
prepare_Rd: run.cluster.matrix.Rd:171: Dropping empty section \examples
prepare_Rd: run.lrg.peaks.Rd:95: Dropping empty section \examples
prepare_Rd: run.peaks.Rd:99: Dropping empty section \examples
prepare_Rd: run.strong.peaks.Rd:115: Dropping empty section \examples
Malformed Title field: should not end in a period.
Packages in Depends field not imported from:
  'Rcpp' 'snowfall'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
fugeR.evo: no visible global function definition for 'runif'
fugeR.sfRun: no visible global function definition for 'sfInit'
fugeR.sfRun: no visible global function definition for 'sfLibrary'
fugeR.sfRun: no visible global function definition for 'sfExport'
fugeR.sfRun: no visible global function definition for 'sfLapply'
fugeR.sfRun: no visible global function definition for 'sfStop'
Undefined global functions or variables:
  runif sfExport sfInit sfLapply sfLibrary sfStop
Consider adding
  importFrom("stats", "runif")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fulltext.Rcheck/00install.out' for details.
installed size is 16.2Mb
  sub-directories of 1Mb or more:
    data  16.2Mb
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for 'funbarRF' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/FunCC.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
.FunFEM.main: no visible global function definition for 'kmeans'
.FunFEM.main: no visible global function definition for 'rmultinom'
.FunFEM.main: no visible global function definition for 'cutree'
.FunFEM.main: no visible global function definition for 'hclust'
.FunFEM.main: no visible global function definition for 'dist'
.FunFEM.main: no visible global function definition for 'par'
.mstep: no visible global function definition for 'cov'
Undefined global functions or variables:
  cov cutree dist hclust kmeans par rmultinom
Consider adding
  importFrom("graphics", "par")
  importFrom("stats", "cov", "cutree", "dist", "hclust", "kmeans",
             "rmultinom")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/funModeling.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/funneljoin.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/FunnelPlotR.Rcheck/00install.out' for details.
Running 'testthat.R' [4s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(funrar)
  > 
  > test_check("funrar")
  -- 1. Error: Conversion from tidy data.frame to sparse & dense matrices (@test-t
  The tidytext package need to be installed to get a sparse matrix
  Backtrace:
   1. testthat::expect_equal(...)
   4. funrar::stack_to_matrix(com_df, "species", "site", sparse = TRUE)
  
  == testthat results  ===========================================================
  [ OK: 277 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: Conversion from tidy data.frame to sparse & dense matrices (@test-tidy_matrix.R#143) 
  
  Error: testthat unit tests failed
  Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/furniture.Rcheck/00install.out' for details.
Running examples in 'furrr-Ex.R' failed
The error most likely occurred in:

> ### Name: future_invoke_map
> ### Title: Invoke functions via futures
> ### Aliases: future_invoke_map future_invoke_map_chr future_invoke_map_dbl
> ###   future_invoke_map_int future_invoke_map_lgl future_invoke_map_dfr
> ###   future_invoke_map_dfc
> 
> ### ** Examples
> 
> 
> 
> df <- dplyr::tibble(
+   f = c("runif", "rpois", "rnorm"),
+   params = list(
+     list(n = 10),
+     list(n = 5, lambda = 10),
+     list(n = 10, mean = -3, sd = 10)
+   )
+ )
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: :: ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Package vignette with placeholder title 'Vignette Title':
  'FusionLearn.Rmd'
Packages in Depends field not imported from:
  'RUnit' 'futile.options'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
.validateGuardExpression: no visible global function definition for
  'runif'
Undefined global functions or variables:
  runif
Consider adding
  importFrom("stats", "runif")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/futureheatwaves.Rcheck/00install.out' for details.
fuzzyBHexact: warning in round(pvals, d = dp): partial argument match
  of 'd' to 'digits'
fuzzyBHexact: warning in round(pprev, d = dp): partial argument match
  of 'd' to 'digits'
fuzzyBHexact: warning in round(p.minus, d = 4): partial argument match
  of 'd' to 'digits'
fuzzyBHexact: warning in round(p.plus, d = 4): partial argument match
  of 'd' to 'digits'
fuzzyBHexact: warning in round(a.minus, d = 4): partial argument match
  of 'd' to 'digits'
fuzzyBHexact: warning in round(a.plus, d = 4): partial argument match
  of 'd' to 'digits'
fuzzyBHexact: warning in round(new.p.minus, d = 4): partial argument
  match of 'd' to 'digits'
fuzzyBHexact: warning in round(new.p.plus, d = 4): partial argument
  match of 'd' to 'digits'
fuzzyBHexact: warning in round(pvals, d = 4): partial argument match of
  'd' to 'digits'
fuzzyBHexact: warning in round(pprev, d = 4): partial argument match of
  'd' to 'digits'
fuzzyBHexact: warning in round(tau, d = 4): partial argument match of
  'd' to 'digits'
probRejTies: no visible binding for global variable 'nn'
Undefined global functions or variables:
  nn
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fuzzyjoin.Rcheck/00install.out' for details.
NeedsCompilation field must take value 'yes' or 'no'
'library' or 'require' call to 'splines' which was already attached by Depends.
  Please remove these calls from your code.
Package in Depends field not imported from: 'splines'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
gensurf: no visible global function definition for 'persp'
gensurf: no visible global function definition for 'rainbow'
plotMF: no visible global function definition for 'plot.new'
plotMF: no visible global function definition for 'plot.window'
plotMF: no visible global function definition for 'runif'
plotMF: no visible global function definition for 'predict'
plotMF: no visible global function definition for 'interpSpline'
plotMF: no visible global function definition for 'lines'
plotMF: no visible global function definition for 'text'
plotMF: no visible global function definition for 'title'
plotMF: no visible global function definition for 'axis'
plotMF: no visible global function definition for 'box'
Undefined global functions or variables:
  axis box interpSpline lines persp plot.new plot.window predict
  rainbow runif text title
Consider adding
  importFrom("grDevices", "rainbow")
  importFrom("graphics", "axis", "box", "lines", "persp", "plot.new",
             "plot.window", "text", "title")
  importFrom("stats", "predict", "runif")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/fxtract.Rcheck/00install.out' for details.
Malformed Title field: should not end in a period.
Packages in Depends field not imported from:
  'MASS' 'igraph'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
DBNScoreStep1: no visible global function definition for 'lm'
DBNScoreStep1: no visible global function definition for 'rlm'
DBNScoreStep1: no visible global function definition for 'pt'
DBNScoreStep2: no visible global function definition for 'lm'
DBNScoreStep2: no visible global function definition for 'rlm'
DBNScoreStep2: no visible global function definition for 'pt'
SimulGeneExpressionAR1: no visible global function definition for
  'rnorm'
SimulGeneExpressionAR1: no visible global function definition for 'ts'
SimulNetworkAdjMatrix: no visible global function definition for
  'runif'
Undefined global functions or variables:
  lm pt rlm rnorm runif ts
Consider adding
  importFrom("stats", "lm", "pt", "rnorm", "runif", "ts")
to your NAMESPACE file.
installed size is 10.5Mb
  sub-directories of 1Mb or more:
    doc   9.3Mb
crossover: no visible global function definition for 'runif'
exchangeSols: no visible global function definition for 'runif'
fps: no visible global function definition for 'runif'
mutation: no visible global function definition for 'runif'
plotBicluster: no visible global function definition for 'gray'
plotBicluster: no visible global function definition for 'heatmap'
reproduction: no visible global function definition for 'runif'
Undefined global functions or variables:
  gray heatmap runif
Consider adding
  importFrom("grDevices", "gray")
  importFrom("stats", "heatmap", "runif")
to your NAMESPACE file.
installed size is  8.2Mb
  sub-directories of 1Mb or more:
    bin   8.2Mb
FPTsimul: no visible global function definition for 'runif'
histplot: no visible global function definition for 'dev.new'
histplot: no visible global function definition for 'hist'
histplot: no visible global function definition for 'par'
histplot: no visible global function definition for 'legend'
mdt: no visible binding for global variable 'deltat'
plot.FPTdensity: no visible global function definition for 'dev.new'
res_summary: no visible global function definition for 'write.table'
res_summary: no visible global function definition for 'sd'
res_summary: no visible global function definition for 'median'
vdt: no visible binding for global variable 'deltat'
Undefined global functions or variables:
  deltat dev.new hist legend median par runif sd write.table
Consider adding
  importFrom("grDevices", "dev.new")
  importFrom("graphics", "hist", "legend", "par")
  importFrom("stats", "deltat", "median", "runif", "sd")
  importFrom("utils", "write.table")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/GADMTools.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gaiah.Rcheck/00install.out' for details.
CI.RMSEA: no visible global function definition for 'qchisq'
CI.RMSEA: no visible global function definition for 'pchisq'
GAIPE.RMSEA: no visible global function definition for 'par'
GAIPE.RMSEA: no visible global function definition for 'abline'
GAIPE.RMSEA: no visible global function definition for 'colors'
GAIPE.RMSEA: no visible global function definition for 'text'
GAIPE.RMSEA: no visible global function definition for 'arrows'
GAIPE.RMSEA: no visible global function definition for 'points'
GAIPE.RMSEA: no visible global function definition for 'axis'
GAIPE.RMSEA: no visible global function definition for 'lines'
GAIPE.RMSEA: no visible global function definition for 'legend'
GAIPE.RMSEA: no visible global function definition for 'pchisq'
GAIPE.RMSEA: no visible global function definition for 'qchisq'
GAIPE.RMSEA: no visible global function definition for 'mtext'
GAIPE.RMSEA: no visible global function definition for 'title'
PA.RMSEA: no visible global function definition for 'pchisq'
PA.RMSEA: no visible global function definition for 'qchisq'
Undefined global functions or variables:
  abline arrows axis colors legend lines mtext par pchisq points qchisq
  text title
Consider adding
  importFrom("grDevices", "colors")
  importFrom("graphics", "abline", "arrows", "axis", "legend", "lines",
             "mtext", "par", "points", "text", "title")
  importFrom("stats", "pchisq", "qchisq")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
cvriskMSM: no visible global function definition for 'predict'
plotcvriskMSM: no visible binding for global variable 'lines'
plotcvriskMSM: no visible global function definition for 'lines'
Undefined global functions or variables:
  lines predict
Consider adding
  importFrom("graphics", "lines")
  importFrom("stats", "predict")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
'library' or 'require' calls in package code:
  'parallel' 'snowfall'
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Package in Depends field not imported from: 'Matrix'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
GAMBoost: no visible global function definition for 'binomial'
GAMBoost: no visible global function definition for 'gaussian'
GAMBoost: no visible global function definition for 'poisson'
GAMBoost: no visible binding for global variable 'sd'
GAMBoost: no visible global function definition for 'Matrix'
calc.confidence.bands: no visible global function definition for
  'predict'
cv.GAMBoost: no visible global function definition for 'binomial'
cv.GAMBoost : eval.fold: no visible global function definition for
  'predict'
cv.GAMBoost: no visible global function definition for 'mclapply'
cv.GAMBoost: no visible binding for global variable 'var'
estimPVal: no visible global function definition for 'mclapply'
plot.GAMBoost: no visible global function definition for 'lines'
Undefined global functions or variables:
  Matrix binomial gaussian lines mclapply poisson predict sd var
Consider adding
  importFrom("graphics", "lines")
  importFrom("stats", "binomial", "gaussian", "poisson", "predict", "sd",
             "var")
to your NAMESPACE file.
Package in Depends field not imported from: 'gamlss'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
':::' call which should be '::': 'gamlss:::.gamlss.bi.list'
  See the note in ?`:::` about the use of this operator.
finterp.data.frame: no visible global function definition for
  'as.formula'
finterp.data.frame: no visible global function definition for 'terms'
finterp.data.frame: no visible global function definition for
  'model.matrix'
finterp.data.frame: no visible global function definition for
  'model.frame'
finterp.default: no visible global function definition for 'terms'
finterp.default: no visible global function definition for
  'model.matrix'
finterp.default: no visible global function definition for
  'model.frame'
gamlss.nl: no visible global function definition for 'nlm'
nl: no visible global function definition for 'is'
nlgamlss: no visible global function definition for 'NO'
nlgamlss: no visible global function definition for 'as.gamlss.family'
nlgamlss: no visible global function definition for 'nlm'
nlgamlss: no visible global function definition for 'cov2cor'
summary.nlgamlss: no visible global function definition for 'coef'
summary.nlgamlss: no visible global function definition for 'pnorm'
Undefined global functions or variables:
  NO as.formula as.gamlss.family coef cov2cor is model.frame
  model.matrix nlm pnorm terms
Consider adding
  importFrom("methods", "is")
  importFrom("stats", "as.formula", "coef", "cov2cor", "model.frame",
             "model.matrix", "nlm", "pnorm", "terms")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gamm4.test.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ganalytics.Rcheck/00install.out' for details.
Package in Depends field not imported from: 'GANPAdata'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
prepare_Rd: GANPA-package.Rd:30: Dropping empty section \seealso
prepare_Rd: GANPA-package.Rd:31: Dropping empty section \examples
prepare_Rd: GSE.Test.Main.Rd:24: Dropping empty section \details
prepare_Rd: GSE.Test.Main.Rd:32: Dropping empty section \note
prepare_Rd: GSE.Test.Main.Rd:33: Dropping empty section \seealso
prepare_Rd: weight.gsets.test.Rd:14: Dropping empty section \details
prepare_Rd: weight.gsets.test.Rd:25: Dropping empty section \note
prepare_Rd: weight.gsets.with.msprot.Rd:17: Dropping empty section \details
prepare_Rd: weight.gsets.with.msprot.Rd:27: Dropping empty section \note
prepare_Rd: weight.gsets.with.msprot.Rd:31: Dropping empty section \examples
Running examples in 'GAparsimony-Ex.R' failed
The error most likely occurred in:

> ### Name: ga_parsimony
> ### Title: GA-PARSIMONY
> ### Aliases: ga_parsimony show,ga_parsimony-method
> ###   print,ga_parsimony-method print,ga_parsimony-method numericOrNA
> ### Keywords: optimize
> 
> ### ** Examples
> 
> 
> #################################
> ### Example 1: Classification ###
> #################################
> 
> # This a toy example that shows how to search, for the *iris* database, 
> # a parsimony classification NNET model with 'GAparsimony' 
> # and 'caret' packages. Validation errors and iterations have been
> # reduced to speedup the process
> 
> library(GAparsimony)
> # Training and testing Datasets
> library(caret)
Loading required package: lattice
Loading required package: ggplot2
Error: package or namespace load failed for 'caret' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Error(s) in re-building vignettes:
--- re-building 'introduction.Rmd' using rmarkdown
Quitting from lines 33-41 (introduction.Rmd) 
Error: processing vignette 'introduction.Rmd' failed with diagnostics:
package or namespace load failed for 'tidyverse' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'introduction.Rmd'

SUMMARY: processing the following file failed:
  'introduction.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gasfluxes.Rcheck/00install.out' for details.
installed size is  5.3Mb
  sub-directories of 1Mb or more:
    data   1.4Mb
    libs   3.3Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gastempt.Rcheck/00install.out' for details.
installed size is  8.3Mb
  sub-directories of 1Mb or more:
    extdata   1.6Mb
    libs      5.1Mb
'library' or 'require' call to 'orthopolynom' which was already attached by Depends.
  Please remove these calls from your code.
Packages in Depends field not imported from:
  'orthopolynom' 'polynom'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
contindic.gb2: no visible global function definition for 'contour'
contindic.gb2: no visible global function definition for 'box'
contindic.gb2: no visible global function definition for 'mtext'
contprof.gb2: no visible global function definition for 'image'
contprof.gb2: no visible global function definition for 'heat.colors'
contprof.gb2: no visible global function definition for 'contour'
contprof.gb2: no visible global function definition for 'text'
contprof.gb2: no visible global function definition for 'box'
dplot.cavgb2: no visible global function definition for 'par'
dplot.cavgb2: no visible global function definition for 'curve'
dplot.cavgb2: no visible global function definition for 'legend'
dplot.cavgb2: no visible global function definition for 'lines'
dplot.cgb2: no visible global function definition for 'curve'
dplot.cgb2: no visible global function definition for 'lines'
dplot.cgb2: no visible global function definition for 'legend'
plotsML.gb2: no visible global function definition for 'par'
plotsML.gb2: no visible global function definition for 'abline'
plotsML.gb2: no visible global function definition for 'curve'
plotsML.gb2: no visible global function definition for 'legend'
saveplot : <local>: no visible global function definition for 'dev.set'
saveplot : <local>: no visible global function definition for
  'dev.print'
saveplot : <local>: no visible binding for global variable 'pdf'
Undefined global functions or variables:
  abline box contour curve dev.print dev.set heat.colors image legend
  lines mtext par pdf text
Consider adding
  importFrom("grDevices", "dev.print", "dev.set", "heat.colors", "pdf")
  importFrom("graphics", "abline", "box", "contour", "curve", "image",
             "legend", "lines", "mtext", "par", "text")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gbfs.Rcheck/00install.out' for details.
installed size is  5.5Mb
  sub-directories of 1Mb or more:
    doc    1.2Mb
    libs   4.2Mb
GNU make is a SystemRequirements.
Package in Depends field not imported from: 'tools'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Unexported objects imported by ':::' calls:
  'tools:::.Rd_get_argument_names' 'tools:::RdTags' 'tools:::fetchRdDB'
  See the note in ?`:::` about the use of this operator.
coeplot: no visible global function definition for 'axis'
coeplot: no visible global function definition for 'lines'
coeplot: no visible global function definition for 'title'
coeplot: no visible global function definition for 'legend'
corplot: no visible global function definition for 'par'
corplot: no visible global function definition for 'pairs'
corplot: no visible global function definition for 'strwidth'
lm.estimate: no visible global function definition for 'as.formula'
lm.estimate: no visible global function definition for 'glm'
panel.cor: no visible global function definition for 'par'
panel.cor: no visible global function definition for 'cor'
panel.cor: no visible global function definition for 'strwidth'
panel.cor: no visible global function definition for 'text'
panel.smooth.r: no visible global function definition for 'par'
panel.smooth.r: no visible global function definition for 'points'
panel.smooth.r: no visible global function definition for 'lines'
posplot: no visible global function definition for 'par'
posplot: no visible global function definition for 'barplot'
posplot: no visible global function definition for 'points'
Undefined global functions or variables:
  as.formula axis barplot cor glm legend lines pairs par points
  strwidth text title
Consider adding
  importFrom("graphics", "axis", "barplot", "legend", "lines", "pairs",
             "par", "points", "strwidth", "text", "title")
  importFrom("stats", "as.formula", "cor", "glm")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/GCalcium.Rcheck/00install.out' for details.
gcat.test: no visible global function definition for 'pnorm'
generate_sub: no visible global function definition for 'runif'
pfcn: no visible global function definition for 'pnorm'
Undefined global functions or variables:
  pnorm runif
Consider adding
  importFrom("stats", "pnorm", "runif")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
installed size is 86.3Mb
  sub-directories of 1Mb or more:
    L8NY18   2.3Mb
    gdal     3.9Mb
    libs    73.4Mb
    proj     5.0Mb
Package in Depends field not imported from: 'tools'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
DownloadGdelt: no visible global function definition for
  'packageVersion'
DownloadGdelt: no visible global function definition for
  'download.file'
GdeltZipToDataframe: no visible global function definition for
  'read.delim'
GdeltZipToDataframe: no visible global function definition for 'unzip'
GetSizeOfGDELT: no visible global function definition for 'read.delim'
IsValidGDELT: no visible global function definition for 'read.delim'
IsValidGDELT: no visible global function definition for 'md5sum'
NormEventCounts: no visible global function definition for
  'download.file'
NormEventCounts: no visible global function definition for 'read.csv'
Undefined global functions or variables:
  download.file md5sum packageVersion read.csv read.delim unzip
Consider adding
  importFrom("utils", "download.file", "packageVersion", "read.csv",
             "read.delim", "unzip")
to your NAMESPACE file.
installed size is  6.1Mb
  sub-directories of 1Mb or more:
    extdata   3.0Mb
    libs      1.8Mb
installed size is  8.2Mb
  sub-directories of 1Mb or more:
    libs   8.1Mb
Package suggested but not available for checking: 'gdxrrw'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/geecure.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/geepack.Rcheck/00install.out' for details.
Running examples in 'GEint-Ex.R' failed
The error most likely occurred in:

> ### Name: GE_BICS
> ### Title: GE_BICS.R
> ### Aliases: GE_BICS
> 
> ### ** Examples
> 
> E <- rnorm(n=500)
> G <- rbinom(n=500, size=2, prob=0.3)
> design_mat <- cbind(1, G, E, G*E)
> outcome <- rnorm(500)
> GE_BICS(outcome=outcome, design_mat=design_mat, desired_coef=4, outcome_type='C')
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: GE_BICS ... loadNamespace -> namespaceImport -> loadNamespace -> library.dynam
Execution halted
Running 'testthat.R' [80s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(GEint)
  > 
  > test_check("GEint")
  -- 1. Error: GE_BICS_old() and GE_BICS() return the same p-value (@test_BICS.R#5
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. GEint::GE_BICS_old(...)
    2. geepack::geeglm
    3. base::getExportedValue(pkg, name)
    4. base::asNamespace(ns)
    5. base::getNamespace(ns)
    6. base::loadNamespace(name)
    9. base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
   11. base::loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]])
   12. base::library.dynam(lib, package, package.lib)
  
  -- 2. Error: GE_BICS() runs fine with vectors (@test_BICS.R#97)  ---------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. GEint::GE_BICS(...)
    2. geepack::geeglm
    3. base::getExportedValue(pkg, name)
    4. base::asNamespace(ns)
    5. base::getNamespace(ns)
    6. base::loadNamespace(name)
    9. base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
   11. base::loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]])
   12. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 9 | SKIPPED: 6 | WARNINGS: 39 | FAILED: 2 ]
  1. Error: GE_BICS_old() and GE_BICS() return the same p-value (@test_BICS.R#53) 
  2. Error: GE_BICS() runs fine with vectors (@test_BICS.R#97) 
  
  Error: testthat unit tests failed
  Execution halted
Package vignette with placeholder title 'Vignette Title':
  'GEint_example.Rmd'
Error(s) in re-building vignettes:
--- re-building 'GEint_example.Rmd' using rmarkdown
Quitting from lines 95-105 (GEint_example.Rmd) 
Error: processing vignette 'GEint_example.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'GEint_example.Rmd'

SUMMARY: processing the following file failed:
  'GEint_example.Rmd'

Error: Vignette re-building failed.
Execution halted
installed size is 12.1Mb
  sub-directories of 1Mb or more:
    doc       1.1Mb
    extdata   8.6Mb
    libs      2.1Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gen5helper.Rcheck/00install.out' for details.
plot.rbga: no visible global function definition for 'par'
plot.rbga: no visible global function definition for 'hist'
plot.rbga: no visible global function definition for 'lines'
rbga: no visible global function definition for 'runif'
rbga: no visible global function definition for 'dnorm'
rbga.bin: no visible global function definition for 'dnorm'
rbga.bin: no visible global function definition for 'runif'
Undefined global functions or variables:
  dnorm hist lines par runif
Consider adding
  importFrom("graphics", "hist", "lines", "par")
  importFrom("stats", "dnorm", "runif")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/genBaRcode.Rcheck/00install.out' for details.
genmvnorm: no visible global function definition for 'rnorm'
Undefined global functions or variables:
  rnorm
Consider adding
  importFrom("stats", "rnorm")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/genderBR.Rcheck/00install.out' for details.
Package suggested but not available for checking: 'genderdata'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gender.Rcheck/00install.out' for details.
installed size is 10.1Mb
  sub-directories of 1Mb or more:
    R  10.1Mb
Running examples in 'GeneBook-Ex.R' failed
The error most likely occurred in:

> ### Name: GeneCard_ID_Convert
> ### Title: GENE ID CONVERT
> ### Aliases: GeneCard_ID_Convert
> 
> ### ** Examples
> 
> ##  One Gene ID Convert
> x = "AD2"
> GeneCard_ID_Convert(x)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: GeneCard_ID_Convert ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
t1p1: no visible global function definition for 'var'
t1p1: no visible global function definition for 'pt'
t1p2: no visible global function definition for 'pt'
Undefined global functions or variables:
  pt var
Consider adding
  importFrom("stats", "pt", "var")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/geneHummus.Rcheck/00install.out' for details.
load.genelist: no visible global function definition for 'read.delim'
Undefined global functions or variables:
  read.delim
Consider adding
  importFrom("utils", "read.delim")
to your NAMESPACE file.
Package suggested but not available for checking: 'RHugin'
fit.dbn: no visible global function definition for 'as'
Undefined global functions or variables:
  as
Consider adding
  importFrom("methods", "as")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Malformed Description field: should contain one or more complete sentences.
installed size is  5.3Mb
  sub-directories of 1Mb or more:
    libs   3.4Mb
Package in Depends field not imported from: 'parallel'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
ForImp.Mahala: no visible global function definition for 'combn'
ForImp.Mahala: no visible global function definition for 'var'
ForImp.Mahala: no visible global function definition for 'quantile'
ForImp.Mahala : <anonymous>: no visible global function definition for
  'var'
ForImp.Mahala : <anonymous> : <anonymous>: no visible global function
  definition for 'var'
ForImp.Mahala : <anonymous> : <anonymous>: no visible global function
  definition for 'quantile'
ForImp.PCA: no visible global function definition for 'cov'
ForImp.PCA: no visible global function definition for 'princomp'
ForImp.PCA: no visible global function definition for 'combn'
ForImp.PCA: no visible global function definition for 'quantile'
ForImp.PCA : <anonymous> : <anonymous>: no visible global function
  definition for 'quantile'
Undefined global functions or variables:
  combn cov princomp quantile var
Consider adding
  importFrom("stats", "cov", "princomp", "quantile", "var")
  importFrom("utils", "combn")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/genius.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/geniusr.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
Package in Depends field not imported from: 'KernSmooth'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
KernSec: no visible global function definition for 'na.omit'
KernSur: no visible global function definition for 'na.fail'
KernSur: no visible global function definition for 'na.omit'
bandwidthselect: no visible global function definition for 'na.omit'
bandwidthselect: no visible global function definition for 'dpik'
correlationselect: no visible global function definition for 'cor'
nearest: no visible global function definition for 'na.fail'
nearest: no visible global function definition for 'na.omit'
per: no visible global function definition for 'na.fail'
Undefined global functions or variables:
  cor dpik na.fail na.omit
Consider adding
  importFrom("stats", "cor", "na.fail", "na.omit")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/genogeographer.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/GenomicMating.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/genotypeR.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/genpathmox.Rcheck/00install.out' for details.
splineAnalyze: no visible global function definition for 'var'
splineAnalyze: no visible global function definition for 'par'
splineAnalyze: no visible global function definition for 'lines'
Undefined global functions or variables:
  lines par var
Consider adding
  importFrom("graphics", "lines", "par")
  importFrom("stats", "var")
to your NAMESPACE file.
Error(s) in re-building vignettes:
--- re-building 'intro_to_geobr.Rmd' using rmarkdown
Loading required namespace: sf
Linking to GEOS 3.8.0, GDAL 3.0.4, PROJ 6.3.1
Quitting from lines 37-42 (intro_to_geobr.Rmd) 
Error: processing vignette 'intro_to_geobr.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'intro_to_geobr.Rmd'

SUMMARY: processing the following file failed:
  'intro_to_geobr.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/geocacheR.Rcheck/00install.out' for details.
PAEA : <anonymous>: no visible global function definition for
  'integrate'
PAEAAnalysis: no visible global function definition for
  'txtProgressBar'
PAEAAnalysis : <anonymous>: no visible global function definition for
  'setTxtProgressBar'
PAEAAnalysis: no visible global function definition for 'par'
PAEAAnalysis: no visible global function definition for 'barplot'
chdirSig: no visible global function definition for 'prcomp'
chdirSig: no visible global function definition for 'rchisq'
chdirSig: no visible global function definition for 'txtProgressBar'
chdirSig : <anonymous> : <anonymous>: no visible global function
  definition for 'setTxtProgressBar'
chdirplots : <anonymous>: no visible global function definition for
  'par'
chdirplots : <anonymous>: no visible global function definition for
  'arrows'
chdirplots : <anonymous>: no visible global function definition for
  'barplot'
multigmtPAEAAnalysis: no visible global function definition for
  'txtProgressBar'
multigmtPAEAAnalysis : <anonymous>: no visible global function
  definition for 'setTxtProgressBar'
multigmtPAEAAnalysis : <anonymous>: no visible global function
  definition for 'data'
multigmtPAEAAnalysis : <anonymous>: no visible global function
  definition for 'write.table'
Undefined global functions or variables:
  arrows barplot data integrate par prcomp rchisq setTxtProgressBar
  txtProgressBar write.table
Consider adding
  importFrom("graphics", "arrows", "barplot", "par")
  importFrom("stats", "integrate", "prcomp", "rchisq")
  importFrom("utils", "data", "setTxtProgressBar", "txtProgressBar",
             "write.table")
to your NAMESPACE file.
Running examples in 'geodiv-Ex.R' failed
The error most likely occurred in:

> ### Name: srw
> ### Title: Radial Wavelength Metrics
> ### Aliases: srw
> 
> ### ** Examples
> 
> library(raster)
Loading required package: sp
> 
> # import raster image
> data(normforest)
> 
> # calculate metrics
> srwvals <- srw(normforest)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: srw ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
installed size is  5.2Mb
  sub-directories of 1Mb or more:
    extdata   3.1Mb
    libs      2.0Mb
installed size is 26.1Mb
  sub-directories of 1Mb or more:
    data  26.0Mb
Malformed Description field: should contain one or more complete sentences.
installed size is 11.6Mb
  sub-directories of 1Mb or more:
    R         8.9Mb
    extdata   1.6Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/geometr.Rcheck/00install.out' for details.
geoscaleBox: no visible global function definition for 'boxplot'
geoscaleBox: no visible global function definition for 'par'
geoscaleBox: no visible global function definition for 'text'
geoscaleBox: no visible global function definition for 'segments'
geoscaleBox: no visible global function definition for 'rect'
geoscaleBox: no visible global function definition for 'rgb'
geoscaleBox: no visible global function definition for 'polygon'
geoscaleBox: no visible global function definition for 'points'
geoscaleBox: no visible global function definition for 'axis'
geoscalePlot: no visible global function definition for 'par'
geoscalePlot: no visible global function definition for 'text'
geoscalePlot: no visible global function definition for 'segments'
geoscalePlot: no visible global function definition for 'rect'
geoscalePlot: no visible global function definition for 'rgb'
geoscalePlot: no visible global function definition for 'points'
geoscalePlot: no visible global function definition for 'axis'
Undefined global functions or variables:
  axis boxplot par points polygon rect rgb segments text
Consider adding
  importFrom("grDevices", "rgb")
  importFrom("graphics", "axis", "boxplot", "par", "points", "polygon",
             "rect", "segments", "text")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/geospark.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/geoSpectral.Rcheck/00install.out' for details.
installed size is  5.9Mb
  sub-directories of 1Mb or more:
    data   3.8Mb
installed size is  6.2Mb
  sub-directories of 1Mb or more:
    R      2.4Mb
    data   3.5Mb
Malformed Description field: should contain one or more complete sentences.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/geotoolsR.Rcheck/00install.out' for details.
Running examples in 'geoviz-Ex.R' failed
The error most likely occurred in:

> ### Name: add_gps_to_rayshader
> ### Title: Adds a GPS trace to a 'rayshader' scene
> ### Aliases: add_gps_to_rayshader
> 
> ### ** Examples
> 
> flight <- example_igc()
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: example_igc ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Running 'testthat.R' [2s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(geoviz)
  > 
  > test_check("geoviz")
  -- 1. Error: (unknown) (@test_imagery.R#5)  ------------------------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. geoviz::example_igc()
    2. geoviz::read_igc(system.file("extdata/example.igc", package = "geoviz"))
   10. dplyr::select(., "X1")
   11. base::getExportedValue(pkg, name)
   12. base::asNamespace(ns)
   13. base::getNamespace(ns)
   14. base::loadNamespace(name)
   15. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 0 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: (unknown) (@test_imagery.R#5) 
  
  Error: testthat unit tests failed
  Execution halted
Running examples in 'GE-Ex.R' failed
The error most likely occurred in:

> ### Name: demand_coefficient
> ### Title: Compute Demand Coefficients of an Agent with a Demand Structural
> ###   Tree
> ### Aliases: demand_coefficient
> 
> ### ** Examples
> 
> #### a Leontief-type node
> dst <- node_new("firm",
+   type = "Leontief", a = c(0.5, 0.1),
+   "wheat", "iron"
+ )
> print(dst, "type")
  levelName     type
1 firm      Leontief
2  ¦--wheat         
3  °--iron          
> node_print(dst)
[1] "Node$fieldsAll will be deprecated in the next release. Please use Node$attributesAll instead."
  levelName        a     type
1 firm      0.5, 0.1 Leontief
2  ¦--wheat                  
3  °--iron                   
> plot(dst)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: plot ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Running examples in 'germanpolls-Ex.R' failed
The error most likely occurred in:

> ### Name: germanpolls
> ### Title: Get data of German polls from wahlrecht.de.
> ### Aliases: germanpolls
> 
> ### ** Examples
> 
> germanpolls(region = "de")
[1] "http://www.wahlrecht.de/umfragen/bundesweite.xml"
Error: `map_df()` requires dplyr
Backtrace:
     x
  1. \-germanpolls::germanpolls(region = "de")
  2.   \-germanpolls::get_data_from_xml_de()
  3.     \-`%>%`(...)
  4.       +-base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
  5.       \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
  6.         \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
  7.           \-germanpolls:::`_fseq`(`_lhs`)
  8.             \-magrittr::freduce(value, `_function_list`)
  9.               \-function_list[[i]](value)
 10.                 \-purrr::map_df(...)
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/GerminaR.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/germinationmetrics.Rcheck/00install.out' for details.
installed size is  7.2Mb
  sub-directories of 1Mb or more:
    libs   7.1Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gesisdata.Rcheck/00install.out' for details.
GESTr: no visible global function definition for 'rnorm'
GESTr: no visible global function definition for 'sd'
GESTr : <anonymous>: no visible global function definition for 'pnorm'
TranSAM : magChange: no visible global function definition for 'median'
TranSAM : dstat: no visible global function definition for 'sd'
TranSAM: no visible binding for global variable 'sd'
TranSAM: no visible global function definition for 'quantile'
findReplicateGroups: no visible global function definition for 'qnorm'
findReplicateGroups: no visible global function definition for 'sd'
fitGMM : simulateData: no visible global function definition for
  'rnorm'
fitGMM : simulateData: no visible global function definition for 'sd'
fitGMM: no visible global function definition for 'median'
fitGMM: no visible global function definition for 'ks.test'
fitRockeDurbin: no visible global function definition for 'dist'
fitRockeDurbin : findLowGenes: no visible global function definition
  for 'median'
fitRockeDurbin : findLowGenes: no visible global function definition
  for 'mad'
fitRockeDurbin: no visible binding for global variable 'sd'
getMonotonicConfidences_multiclass: no visible global function
  definition for 'pnorm'
getMonotonicConfidences_multiclass: no visible global function
  definition for 'sd'
Undefined global functions or variables:
  dist ks.test mad median pnorm qnorm quantile rnorm sd
Consider adding
  importFrom("stats", "dist", "ks.test", "mad", "median", "pnorm",
             "qnorm", "quantile", "rnorm", "sd")
to your NAMESPACE file.
Running examples in 'GetBCBData-Ex.R' failed
The error most likely occurred in:

> ### Name: gbcbd_get_series
> ### Title: Imports time series data from BCB-SGS System (Banco Central do
> ###   Brasil, sistema de series temporais)
> ### Aliases: gbcbd_get_series
> 
> ### ** Examples
> 
> 
> my.id <- c('Taxa de juros - Selic' = 11)
> df <- gbcbd_get_series(my.id)

Fetching Taxa de juros - Selic [11] from BCB-SGS with cache 
	 Found 2511 observationsError in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: gbcbd_get_series ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'GetBCBData-vignette.Rmd' using rmarkdown
Quitting from lines 29-59 (GetBCBData-vignette.Rmd) 
Error: processing vignette 'GetBCBData-vignette.Rmd' failed with diagnostics:
package or namespace load failed for 'tidyverse' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'GetBCBData-vignette.Rmd'

SUMMARY: processing the following file failed:
  'GetBCBData-vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'GetDFPData-Ex.R' failed
The error most likely occurred in:

> ### Name: gdfpd.read.fre.zip.file
> ### Title: Reads a single FRE zip file downloaded from Bovespa
> ### Aliases: gdfpd.read.fre.zip.file
> 
> ### ** Examples
> 
> 
> my.f <- system.file('extdata/FRE_6629_HERC_2010-12-31.zip', package = 'GetDFPData')
> 
> my.l <- gdfpd.read.fre.zip.file(my.f)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: gdfpd.read.fre.zip.file ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Running examples in 'GetLattesData-Ex.R' failed
The error most likely occurred in:

> ### Name: gld_read_zip
> ### Title: Reads xml data from lattes zip file
> ### Aliases: gld_read_zip
> 
> ### ** Examples
> 
> 
> f.in <- system.file('extdata/3262699324398819.zip', package = 'GetLattesData')
> my.l <- gld_read_zip(f.in)

Reading  3262699324398819.zipError in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: gld_read_zip ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'gld_vignette-ReadLattes.Rmd' using rmarkdown
Quitting from lines 44-57 (gld_vignette-ReadLattes.Rmd) 
Error: processing vignette 'gld_vignette-ReadLattes.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'gld_vignette-ReadLattes.Rmd'

SUMMARY: processing the following file failed:
  'gld_vignette-ReadLattes.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/getLattes.Rcheck/00install.out' for details.
'library' or 'require' call to 'party' which was already attached by Depends.
  Please remove these calls from your code.
Package in Depends field not imported from: 'party'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
gTree: no visible global function definition for 'ctree'
gTree: no visible global function definition for 'ctree_control'
guttmanErrors: no visible global function definition for 'runif'
Undefined global functions or variables:
  ctree ctree_control runif
Consider adding
  importFrom("stats", "runif")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/getTBinR.Rcheck/00install.out' for details.
Missing or unexported object: 'stable::dstable.quick'
Malformed Title field: should not end in a period.
Malformed Description field: should contain one or more complete sentences.
'library' or 'require' call to 'multtest' which was already attached by Depends.
  Please remove these calls from your code.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/GFE.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gfer.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggalluvial.Rcheck/00install.out' for details.
Running examples in 'GGally-Ex.R' failed
The error most likely occurred in:

> ### Name: broomify
> ### Title: Broomify a model
> ### Aliases: broomify
> 
> ### ** Examples
> 
> data(mtcars)
> model <- stats::lm(mpg ~ wt + qsec + am, data = mtcars)
> broomified_model <- broomify(model)
Error in require_namespaces("broom") : 
  please install the package 'broom'.  install.packages('broom') 
Calls: broomify -> require_namespaces
Execution halted
Running 'spelling.R' [0s]
  Running 'testthat.R' [35s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > 
  > if (requireNamespace('testthat', quietly = TRUE)) {
  +   library(testthat)
  +   library(GGally)
  + 
  +   test_check("GGally")
  + }
  Loading required package: ggplot2
  Registered S3 method overwritten by 'GGally':
    method from   
    +.gg   ggplot2
  -- 1. Error: example (@test-ggcoef.R#11)  --------------------------------------
  please install the package 'broom'.  install.packages('broom') 
  Backtrace:
    1. GGally:::expect_print(ggcoef(reg))
   11. GGally::ggcoef(reg)
   12. GGally:::require_namespaces("broom")
  
  -- 2. Error: model_beta_label (@test-ggnostic.R#49)  ---------------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. testthat::expect_equal(...)
    4. GGally::model_beta_label(mod)
    7. broom::augment
    8. base::getExportedValue(pkg, name)
    9. base::asNamespace(ns)
   10. base::getNamespace(ns)
   11. base::loadNamespace(name)
   13. base::loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]])
   14. base::library.dynam(lib, package, package.lib)
  
  -- 3. Error: ggnostic mtcars (@test-ggnostic.R#64)  ----------------------------
  please install the package 'broom'.  install.packages('broom') 
  Backtrace:
   1. GGally::ggnostic(...)
   4. GGally::broomify(model)
   5. GGally:::require_namespaces("broom")
  
  == testthat results  ===========================================================
  [ OK: 539 | SKIPPED: 3 | WARNINGS: 0 | FAILED: 3 ]
  1. Error: example (@test-ggcoef.R#11) 
  2. Error: model_beta_label (@test-ggnostic.R#49) 
  3. Error: ggnostic mtcars (@test-ggnostic.R#64) 
  
  Error: testthat unit tests failed
  Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggalt.Rcheck/00install.out' for details.
Running 'testthat.R' [6s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(ggamma)
  > 
  > test_check("ggamma")
  -- 1. Error: ggamma equals gengamma.orig from flexsurv (@test_ggamma.R#111)  ---
  could not find function "dgengamma.orig"
  Backtrace:
   1. testthat::expect_equal(...)
   2. testthat::quasi_label(enquo(object), label, arg = "object")
   3. rlang::eval_bare(expr, quo_get_env(quo))
  
  == testthat results  ===========================================================
  [ OK: 22 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: ggamma equals gengamma.orig from flexsurv (@test_ggamma.R#111) 
  
  Error: testthat unit tests failed
  Execution halted
Running examples in 'ggasym-Ex.R' failed
The error most likely occurred in:

> ### Name: add_missing_combinations
> ### Title: Add missing combinations of x and y to a data frame
> ### Aliases: add_missing_combinations
> 
> ### ** Examples
> 
> df <- data.frame(a = c("A", "B"),
+                  b = c("C", "D"),
+                  untouched = c(1, 2))
> df
  a b untouched
1 A C         1
2 B D         2
> 
> add_missing_combinations(df, a, b)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: add_missing_combinations ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'ggasym-corrr.Rmd' using rmarkdown
Quitting from lines 30-34 (ggasym-corrr.Rmd) 
Error: processing vignette 'ggasym-corrr.Rmd' failed with diagnostics:
package or namespace load failed for 'corrr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'ggasym-corrr.Rmd'

--- re-building 'ggasym-stats.Rmd' using rmarkdown
Quitting from lines 28-34 (ggasym-stats.Rmd) 
Error: processing vignette 'ggasym-stats.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'ggasym-stats.Rmd'

SUMMARY: processing the following files failed:
  'ggasym-corrr.Rmd' 'ggasym-stats.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggBubbles.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggbump.Rcheck/00install.out' for details.
Running examples in 'ggcharts-Ex.R' failed
The error most likely occurred in:

> ### Name: bar_chart
> ### Title: Bar Chart
> ### Aliases: bar_chart column_chart
> 
> ### ** Examples
> 
> data(biomedicalrevenue)
> revenue2018 <- biomedicalrevenue[biomedicalrevenue$year == 2018, ]
> revenue_roche <- biomedicalrevenue[biomedicalrevenue$company == "Roche", ]
> 
> ## By default bar_chart() creates a horizontal and sorted plot
> bar_chart(revenue2018, company, revenue)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: bar_chart ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Running 'testthat.R' [2s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(ggcharts)
  Loading required package: ggplot2
  > 
  > test_check("ggcharts")
  -- 1. Error: (unknown) (@test-bar_chart.R#2)  ----------------------------------
  package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::library(dplyr)
   2. base::tryCatch(...)
   3. base:::tryCatchList(expr, classes, parentenv, handlers)
   4. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   5. value[[3L]](cond)
  
  -- 2. Error: (unknown) (@test-pre_process_data.R#3)  ---------------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. dplyr::tribble
   2. base::getExportedValue(pkg, name)
   3. base::asNamespace(ns)
   4. base::getNamespace(ns)
   5. base::loadNamespace(name)
   6. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 0 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 2 ]
  1. Error: (unknown) (@test-bar_chart.R#2) 
  2. Error: (unknown) (@test-pre_process_data.R#3) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'customize.Rmd' using rmarkdown
Quitting from lines 25-44 (customize.Rmd) 
Error: processing vignette 'customize.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'customize.Rmd'

--- re-building 'highlight.Rmd' using rmarkdown
Loading required package: ggplot2
Quitting from lines 24-29 (highlight.Rmd) 
Error: processing vignette 'highlight.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'highlight.Rmd'

--- re-building 'themes.Rmd' using rmarkdown
Loading required package: ggplot2
Quitting from lines 23-25 (themes.Rmd) 
Error: processing vignette 'themes.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'themes.Rmd'

SUMMARY: processing the following files failed:
  'customize.Rmd' 'highlight.Rmd' 'themes.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggdag.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggdist.Rcheck/00install.out' for details.
Running examples in 'ggeasy-Ex.R' failed
The error most likely occurred in:

> ### Name: easy_labs
> ### Title: Easily add ggplot labels using label attribute of 'data.frame'
> ###   column
> ### Aliases: easy_labs
> 
> ### ** Examples
> 
> 
> iris_labs <- iris
> 
> lbl <- c('Sepal Length', 'Sepal Width', 'Petal Length', 'Petal Width', 'Flower Species')
> 
> labelled::var_label(iris_labs) <- split(lbl,names(iris_labs))
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: :: ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Running 'testthat.R' [5s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(ggeasy)
  > 
  > test_check("ggeasy")
  -- 1. Error: (unknown) (@test-labs.R#2)  ---------------------------------------
  package or namespace load failed for 'labelled' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::library(labelled)
   2. base::tryCatch(...)
   3. base:::tryCatchList(expr, classes, parentenv, handlers)
   4. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   5. value[[3L]](cond)
  
  == testthat results  ===========================================================
  [ OK: 431 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: (unknown) (@test-labs.R#2) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'shortcuts.Rmd' using rmarkdown
Quitting from lines 15-19 (shortcuts.Rmd) 
Error: processing vignette 'shortcuts.Rmd' failed with diagnostics:
package or namespace load failed for 'labelled' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'shortcuts.Rmd'

--- re-building 'tests_and_coverage.Rmd' using rmarkdown
--- finished re-building 'tests_and_coverage.Rmd'

SUMMARY: processing the following file failed:
  'shortcuts.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggedit.Rcheck/00install.out' for details.
Running examples in 'ggeffects-Ex.R' failed
The error most likely occurred in:

> ### Name: get_title
> ### Title: Get titles and labels from data
> ### Aliases: get_title get_x_title get_y_title get_legend_title
> ###   get_legend_labels get_x_labels get_complete_df
> 
> ### ** Examples
> 
> library(sjmisc)
Error: package or namespace load failed for 'sjmisc' in inDL(x, as.logical(local), as.logical(now), ...):
 unable to load shared object 'D:/temp/RtmpsTmSE7/RLIBS_2ea4880b4513/dplyr/libs/x64/dplyr.dll':
  LoadLibrary failure:  Das angegebene Modul wurde nicht gefunden.
Execution halted
Error(s) in re-building vignettes:
--- re-building 'ggenealogy.Rnw' using Sweave
Warning: Removed 1 rows containing missing values (geom_segment).
Warning: Removed 1 rows containing missing values (geom_segment).
Warning: Removed 1 rows containing missing values (geom_segment).
Warning: Removed 1 rows containing missing values (geom_segment).
Warning: Removed 63 rows containing missing values (geom_segment).
Warning: Removed 63 rows containing missing values (geom_segment).
Warning: Removed 63 rows containing missing values (geom_segment).
Warning: Removed 63 rows containing missing values (geom_segment).

Error: processing vignette 'ggenealogy.Rnw' failed with diagnostics:
 chunk 60 
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?

--- failed re-building 'ggenealogy.Rnw'

SUMMARY: processing the following file failed:
  'ggenealogy.Rnw'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggfan.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggfocus.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggformula.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggfortify.Rcheck/00install.out' for details.
Running examples in 'ggguitar-Ex.R' failed
The error most likely occurred in:

> ### Name: select_chords
> ### Title: Select chords by criteria
> ### Aliases: select_chords
> 
> ### ** Examples
> 
> select_chords(chord_name = 'Major', string_5_fret = 3)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: select_chords ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Running 'test_tablature.R' [0s]
  Running 'testthat.R' [3s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(ggguitar)
  > 
  > test_check("ggguitar")
  -- 1. Error: Selected chords are correct  --------------------------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. ggguitar::select_chords("g", "Major")
   2. ggguitar:::narrow_chord(chord, shQuote(chord_name), "chord")
   3. dplyr::filter_
   4. base::getExportedValue(pkg, name)
   5. base::asNamespace(ns)
   6. base::getNamespace(ns)
   7. base::loadNamespace(name)
   8. base::library.dynam(lib, package, package.lib)
  
  -- 2. Error: Selected chords include third fret (@test_chords.R#32)  -----------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. ggguitar::select_chords("g", "Major", string_5_fret = 3)
   2. ggguitar:::narrow_chord(chord, shQuote(chord_name), "chord")
   3. dplyr::filter_
   4. base::getExportedValue(pkg, name)
   5. base::asNamespace(ns)
   6. base::getNamespace(ns)
   7. base::loadNamespace(name)
   8. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 6 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 2 ]
  1. Error: Selected chords are correct 
  2. Error: Selected chords include third fret (@test_chords.R#32) 
  
  Error: testthat unit tests failed
  Execution halted
Package vignette with placeholder title 'Vignette Title':
  'my-vignette.Rmd'
Error(s) in re-building vignettes:
--- re-building 'gghalves.Rmd' using rmarkdown
Quitting from lines 12-18 (gghalves.Rmd) 
Error: processing vignette 'gghalves.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'gghalves.Rmd'

SUMMARY: processing the following file failed:
  'gghalves.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gghighlight.Rcheck/00install.out' for details.
Error(s) in re-building vignettes:
--- re-building 'package_intro.Rmd' using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Quitting from lines 71-79 (package_intro.Rmd) 
Error: processing vignette 'package_intro.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'package_intro.Rmd'

SUMMARY: processing the following file failed:
  'package_intro.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'gginnards-Ex.R' failed
The error most likely occurred in:

> ### Name: drop_vars
> ### Title: Explore and manipulate the embedded data.
> ### Aliases: drop_vars mapped_vars data_vars data_attributes
> 
> ### ** Examples
> 
> library(ggplot2)
> 
> p <- ggplot(mpg, aes(factor(year), (cty + hwy) / 2)) +
+   geom_boxplot() +
+   facet_grid(. ~ class)
> 
> mapped_vars(p) # those in use
[1] "year"  "cty"   "hwy"   "class"
> mapped_vars(p, invert = TRUE) # those not used
[1] "manufacturer" "model"        "displ"        "cyl"          "trans"       
[6] "drv"          "fl"          
> 
> p.dp <- drop_vars(p) # we drop unused vars
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: drop_vars ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'user-guide-1.Rmd' using rmarkdown
--- finished re-building 'user-guide-1.Rmd'

--- re-building 'user-guide-2.Rmd' using rmarkdown
Quitting from lines 362-363 (user-guide-2.Rmd) 
Error: processing vignette 'user-guide-2.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'user-guide-2.Rmd'

SUMMARY: processing the following file failed:
  'user-guide-2.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggiraphExtra.Rcheck/00install.out' for details.
installed size is  5.4Mb
  sub-directories of 1Mb or more:
    doc    1.0Mb
    libs   2.0Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gglogo.Rcheck/00install.out' for details.
Package vignette with placeholder title 'Vignette Title':
  'intro.Rmd'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggmap.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggmcmc.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggmosaic.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggmsa.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggmuller.Rcheck/00install.out' for details.
Running examples in 'ggnormalviolin-Ex.R' failed
The error most likely occurred in:

> ### Name: geom_normalviolin
> ### Title: Creates normal violins with specified means and standard
> ###   deviations
> ### Aliases: geom_normalviolin
> 
> ### ** Examples
> 
> library(ggplot2)
> library(ggnormalviolin)
> 
> d <- data.frame(
+   Distribution = c("A", "B"),
+   Distribution_mean = c(80, 90),
+   Distribution_sd = c(15, 10)
+ )
> 
> ggplot(data = d, aes(x = Distribution)) +
+   geom_normalviolin(aes(mu = Distribution_mean,
+                       sigma = Distribution_sd))
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: <Anonymous> ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Running examples in 'ggpage-Ex.R' failed
The error most likely occurred in:

> ### Name: paper_shape
> ### Title: Identify the edges of the paper of each page
> ### Aliases: paper_shape
> 
> ### ** Examples
> 
> paper_shape(ggpage_build(tinderbox))
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: paper_shape ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Running 'testthat.R' [2s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(ggpage)
  > 
  > test_check("ggpage")
  -- 1. Error: The number of rows and cols are correct (@test-paper_shape.R#4)  --
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. testthat::expect_equal(...)
    5. ggpage::paper_shape(ggpage_build(tinderbox))
    9. dplyr::group_by
   10. base::getExportedValue(pkg, name)
   11. base::asNamespace(ns)
   12. base::getNamespace(ns)
   13. base::loadNamespace(name)
   14. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 11 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: The number of rows and cols are correct (@test-paper_shape.R#4) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'different-features.Rmd' using rmarkdown
Quitting from lines 24-40 (different-features.Rmd) 
Error: processing vignette 'different-features.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'different-features.Rmd'

SUMMARY: processing the following file failed:
  'different-features.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'ggparliament-Ex.R' failed
The error most likely occurred in:

> ### Name: draw_majoritythreshold
> ### Title: Draw majority threshold
> ### Aliases: draw_majoritythreshold
> 
> ### ** Examples
> 
> data <- election_data[
+   election_data$country == "USA" &
+   election_data$house == "Representatives" &
+   election_data$year == "2016",
+ ]
> usa_data <- parliament_data(
+   election_data = data,
+   type = "semicircle",
+   party_seats = data$seats,
+   parl_rows = 8
+ )
> ggplot2::ggplot(usa_data, ggplot2::aes(x, y, colour = party_long)) +
+   geom_parliament_seats() +
+   draw_majoritythreshold(
+     n = 218,
+     label = TRUE,
+     type = 'semicircle'
+   ) +
+   theme_ggparliament()
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: +.gg ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Running 'testthat.R' [2s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > Sys.setenv(R_TESTS = "")
  > library(testthat)
  > library(ggparliament)
  > 
  > test_check("ggparliament")
  -- 1. Error: (unknown) (@test_parliament_data.R#4)  ----------------------------
  package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::library(dplyr)
   2. base::tryCatch(...)
   3. base:::tryCatchList(expr, classes, parentenv, handlers)
   4. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   5. value[[3L]](cond)
  
  == testthat results  ===========================================================
  [ OK: 0 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: (unknown) (@test_parliament_data.R#4) 
  
  Error: testthat unit tests failed
  Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggperiodic.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggplotAssist.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggplotgui.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggplotlyExtra.Rcheck/00install.out' for details.
Running examples in 'ggpmisc-Ex.R' failed
The error most likely occurred in:

> ### Name: geom_table
> ### Title: Inset tables
> ### Aliases: geom_table geom_table_npc
> 
> ### ** Examples
> 
> library(dplyr)
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Error(s) in re-building vignettes:
--- re-building 'user-guide.Rmd' using rmarkdown
Quitting from lines 30-37 (user-guide.Rmd) 
Error: processing vignette 'user-guide.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'user-guide.Rmd'

SUMMARY: processing the following file failed:
  'user-guide.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'ggpointdensity-Ex.R' failed
The error most likely occurred in:

> ### Name: geom_pointdensity
> ### Title: A cross between a scatter plot and a 2D density plot
> ### Aliases: geom_pointdensity stat_pointdensity StatPointdensity
> 
> ### ** Examples
> 
> library(ggplot2)
> library(dplyr)
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggpubr.Rcheck/00install.out' for details.
Running examples in 'ggQC-Ex.R' failed
The error most likely occurred in:

> ### Name: QC_Violations
> ### Title: Calculate QC Violations
> ### Aliases: QC_Violations
> 
> ### ** Examples
> 
> #####################################
> #  Example 1: XmR Check Violations  #
> #####################################
> # Load Libraries ----------------------------------------------------------
>  require(ggQC)
> 
> # Setup Data --------------------------------------------------------------
> 
>     set.seed(5555)
>     QC_XmR <- data.frame(
+     data = c(c(-1, 2.3, 2.4, 2.5),                        #Outlier Data
+           sample(c(rnorm(60),5,-5), 62, replace = FALSE), #Normal Data
+           c(1,-.3, -2.4,-2.6,-2.5,-2.7, .3)),             #Outlier Data
+     Run_Order = 1:73                                      #Run Order
+     )
> 
>    QC_Vs <- QC_Violations(data  = QC_XmR$data, method = "XmR")
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: QC_Violations ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Running 'testthat.R' [13s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(ggQC)
  > #require(plyr)
  > test_check("ggQC")
  -- 1. Error: (unknown) (@testThat_Violation.R#7)  ------------------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. ggQC::QC_Violations(data = wheeler91$Average, method = "XmR")
   2. dplyr::select
   3. base::getExportedValue(pkg, name)
   4. base::asNamespace(ns)
   5. base::getNamespace(ns)
   6. base::loadNamespace(name)
   7. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 133 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: (unknown) (@testThat_Violation.R#7) 
  
  Error: testthat unit tests failed
  Execution halted
Running examples in 'ggQQunif-Ex.R' failed
The error most likely occurred in:

> ### Name: geom_QQ_unif
> ### Title: geom_QQ_unif
> ### Aliases: geom_QQ_unif
> 
> ### ** Examples
> 
> library(ggplot2)
> library(dplyr)
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggquiver.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggRandomForests.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggraph.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggraptR.Rcheck/00install.out' for details.
installed size is  9.3Mb
  sub-directories of 1Mb or more:
    extdata   9.0Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggResidpanel.Rcheck/00install.out' for details.
Error(s) in re-building vignettes:
--- re-building 'gallery.Rmd' using rmarkdown
Picking joint bandwidth of 6.68
Warning: Removed 250 rows containing non-finite values (stat_density_ridges).
Quitting from lines 43-70 (gallery.Rmd) 
Error: processing vignette 'gallery.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'gallery.Rmd'

--- re-building 'introduction.Rmd' using rmarkdown
Picking joint bandwidth of 0.181
Picking joint bandwidth of 0.181
Picking joint bandwidth of 0.181
Picking joint bandwidth of 0.181
Picking joint bandwidth of 0.181
Picking joint bandwidth of 0.181
Picking joint bandwidth of 0.181
Picking joint bandwidth of 0.123
Picking joint bandwidth of 0.212
Picking joint bandwidth of 0.207
Picking joint bandwidth of 3.37
Picking joint bandwidth of 0.181
Picking joint bandwidth of 0.181
Picking joint bandwidth of 0.181
Picking joint bandwidth of 0.181
Picking joint bandwidth of 0.181
Picking joint bandwidth of 0.181
Picking joint bandwidth of 0.181
Picking joint bandwidth of 0.181
Picking joint bandwidth of 0.181
Picking joint bandwidth of 0.181
Picking joint bandwidth of 0.181
Picking joint bandwidth of 0.181
Quitting from lines 276-284 (introduction.Rmd) 
Error: processing vignette 'introduction.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'introduction.Rmd'

SUMMARY: processing the following files failed:
  'gallery.Rmd' 'introduction.Rmd'

Error: Vignette re-building failed.
Execution halted
Malformed Description field: should contain one or more complete sentences.
Package listed in more than one of Depends, Imports, Suggests, Enhances:
  'ggplot2'
A package should be listed in only one of these fields.
Package in Depends field not imported from: 'ggplot2'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
ggroc: no visible global function definition for 'ggplot'
ggroc: no visible global function definition for 'aes'
ggroc: no visible global function definition for 'geom_point'
ggroc: no visible global function definition for 'geom_line'
ggroc: no visible global function definition for 'theme'
ggroc: no visible global function definition for 'element_text'
ggroc: no visible global function definition for 'labs'
ggroc: no visible global function definition for 'ggsave'
Undefined global functions or variables:
  aes element_text geom_line geom_point ggplot ggsave labs theme
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggsn.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggsolvencyii.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggsom.Rcheck/00install.out' for details.
Running examples in 'ggspatial-Ex.R' failed
The error most likely occurred in:

> ### Name: layer_spatial
> ### Title: Turn a spatial object into a ggplot2 layer
> ### Aliases: layer_spatial annotation_spatial layer_spatial.default
> ###   annotation_spatial.default shadow_spatial shadow_spatial.default
> 
> ### ** Examples
> 
> library(ggplot2)
> load_longlake_data()
Warning in showSRID(uprojargs, format = "PROJ", multiline = "NO") :
  Discarded datum Unknown based on GRS80 ellipsoid in CRS definition,
 but +towgs84= values preserved
Warning in showSRID(uprojargs, format = "PROJ", multiline = "NO") :
  Discarded datum Unknown based on GRS80 ellipsoid in CRS definition,
 but +towgs84= values preserved
> 
> ggplot() +
+ 
+   # annotation_spatial() layers don't train the scales, so data stays central
+   annotation_spatial(longlake_roadsdf, size = 2, col = "black") +
+   annotation_spatial(longlake_roadsdf, size = 1.6, col = "white") +
+ 
+   # raster layers train scales and get projected automatically
+   layer_spatial(longlake_depth_raster, aes(alpha = stat(band1)), fill = "darkblue") +
+   scale_alpha_continuous(na.value = 0) +
+ 
+   # layer_spatial() layers train the scales
+   layer_spatial(longlake_depthdf, aes(col = DEPTH_M)) +
+ 
+   # spatial-aware automagic scale bar
+   annotation_scale(location = "tl") +
+ 
+   # spatial-aware automagic north arrow
+   annotation_north_arrow(location = "br", which_north = "true")
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Running examples in 'ggspectra-Ex.R' failed
The error most likely occurred in:

> ### Name: autoplot.object_spct
> ### Title: Create a complete ggplot for a object spectrum.
> ### Aliases: autoplot.object_spct autoplot.object_mspct
> ### Keywords: hplot
> 
> ### ** Examples
> 
> 
> autoplot(Ler_leaf.spct)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: autoplot ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'userguide1-grammar.Rmd' using rmarkdown
Quitting from lines 99-110 (userguide1-grammar.Rmd) 
Error: processing vignette 'userguide1-grammar.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'userguide1-grammar.Rmd'

--- re-building 'userguide2-autoplot-methods.Rmd' using rmarkdown
Quitting from lines 26-32 (userguide2-autoplot-methods.Rmd) 
Error: processing vignette 'userguide2-autoplot-methods.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'userguide2-autoplot-methods.Rmd'

--- re-building 'userguide3-data-manip.Rmd' using rmarkdown
Quitting from lines 28-38 (userguide3-data-manip.Rmd) 
Error: processing vignette 'userguide3-data-manip.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'userguide3-data-manip.Rmd'

SUMMARY: processing the following files failed:
  'userguide1-grammar.Rmd' 'userguide2-autoplot-methods.Rmd'
  'userguide3-data-manip.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggstatsplot.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggstudent.Rcheck/00install.out' for details.
Error(s) in re-building vignettes:
--- re-building 'ggswissmaps_intro.Rmd' using rmarkdown
Quitting from lines 61-75 (ggswissmaps_intro.Rmd) 
Error: processing vignette 'ggswissmaps_intro.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'ggswissmaps_intro.Rmd'

SUMMARY: processing the following file failed:
  'ggswissmaps_intro.Rmd'

Error: Vignette re-building failed.
Execution halted
Error(s) in re-building vignettes:
--- re-building 'plotting_text.Rmd' using rmarkdown
Quitting from lines 30-58 (plotting_text.Rmd) 
Error: processing vignette 'plotting_text.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'plotting_text.Rmd'

--- re-building 'theme_elements.Rmd' using rmarkdown
Quitting from lines 116-142 (theme_elements.Rmd) 
Error: processing vignette 'theme_elements.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'theme_elements.Rmd'

SUMMARY: processing the following files failed:
  'plotting_text.Rmd' 'theme_elements.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'ggthemes-Ex.R' failed
The error most likely occurred in:

> ### Name: theme_economist
> ### Title: ggplot color theme based on the Economist
> ### Aliases: theme_economist theme_economist_white
> 
> ### ** Examples
> 
> library("ggplot2")
> 
> p <- ggplot(mtcars) +
+      geom_point(aes(x = wt, y = mpg, colour = factor(gear))) +
+      facet_wrap(~am) +
+      # Economist puts x-axis labels on the right-hand side
+      scale_y_continuous(position = "right")
> 
> ## Standard
> p + theme_economist() +
+   scale_colour_economist()
> 
> # Change axis lines to vertical
> p + theme_economist(horizontal = FALSE) +
+     scale_colour_economist() +
+     coord_flip()
> 
> ## White panel/light gray background
> p + theme_economist_white() +
+     scale_colour_economist()
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: theme_economist_white ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggVennDiagram.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ggvis.Rcheck/00install.out' for details.
Error(s) in re-building vignettes:
--- re-building 'ggvoronoi.Rmd' using rmarkdown
Quitting from lines 14-20 (ggvoronoi.Rmd) 
Error: processing vignette 'ggvoronoi.Rmd' failed with diagnostics:
package or namespace load failed for 'ggmap' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'ggvoronoi.Rmd'

SUMMARY: processing the following file failed:
  'ggvoronoi.Rmd'

Error: Vignette re-building failed.
Execution halted
Running 'testthat.R' [3s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(ghibli)
  > 
  > test_check("ghibli")
  -- 1. Error: (unknown) (@test-scales.R#5)  -------------------------------------
  package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::library(dplyr)
   2. base::tryCatch(...)
   3. base:::tryCatchList(expr, classes, parentenv, handlers)
   4. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   5. value[[3L]](cond)
  
  == testthat results  ===========================================================
  [ OK: 0 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: (unknown) (@test-scales.R#5) 
  
  Error: testthat unit tests failed
  Execution halted
Namespace with empty importFrom: 'statmod'
Malformed Title field: should not end in a period.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ghypernet.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gibble.Rcheck/00install.out' for details.
acovamcmc: no visible global function definition for 'rnorm'
acovamcmc: no visible global function definition for 'rgamma'
acovamcmc: no visible binding for global variable 'quantile'
acovamcmc: no visible global function definition for 'quantile'
acovamcmc: no visible global function definition for 'var'
plot.acovamcmc: no visible global function definition for 'dev.new'
plot.acovamcmc: no visible global function definition for 'par'
plot.acovamcmc: no visible global function definition for 'density'
plot.acovamcmc: no visible global function definition for 'acf'
plot.acovamcmc: no visible global function definition for 'contour'
plot.acovamcmc: no visible global function definition for 'image'
plot.acovamcmc: no visible global function definition for 'persp'
Undefined global functions or variables:
  acf contour density dev.new image par persp quantile rgamma rnorm var
Consider adding
  importFrom("grDevices", "dev.new")
  importFrom("graphics", "contour", "image", "par", "persp")
  importFrom("stats", "acf", "density", "quantile", "rgamma", "rnorm",
             "var")
to your NAMESPACE file.
NB: .First.lib is obsolete and will not be used in R >= 3.0.0
File 'gibbs.met/R/firstlib.R':
  .First.lib calls:
    cat("Naive Gibbs Sampling with Metropolis steps(gibbs.met) loaded\n",     "COPYRIGHT 2008 (c) Longhai Li (http://math.usask.ca/~longhai)\n",     "Type ?begin.gibbs.met for help to this package\n", sep = "")

Package startup functions should use 'packageStartupMessage' to
  generate messages.
See section 'Good practice' in '?.onAttach'.

met_gaussian : one_transition: no visible global function definition
  for 'rnorm'
met_gaussian : one_transition: no visible global function definition
  for 'runif'
Undefined global functions or variables:
  rnorm runif
Consider adding
  importFrom("stats", "rnorm", "runif")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/GillespieSSA2.Rcheck/00install.out' for details.
Found the following significant warnings:
  Warning: namespace 'Rcpp' is not available and has been replaced
See 'd:/Rcompile/CRANpkg/local/4.0/GiNA.Rcheck/00install.out' for details.
Warning: namespace 'Rcpp' is not available and has been replaced
  by .GlobalEnv when processing object '<unknown>'
  Warning: namespace 'Rcpp' is not available and has been replaced
  by .GlobalEnv when processing object '<unknown>'
  Warning: namespace 'Rcpp' is not available and has been replaced
  by .GlobalEnv when processing object '<unknown>'
  Warning: namespace 'Rcpp' is not available and has been replaced
  by .GlobalEnv when processing object '<unknown>'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/giphyr.Rcheck/00install.out' for details.
Found the following sources/headers not terminated with a newline:
  inst/include/GiRaF.hpp
  inst/include/lattice.hpp
  inst/include/sampler.hpp
Some compilers warn on such files.
choro.legend: no visible global function definition for 'strwidth'
choro.legend: no visible global function definition for 'legend'
choro.legend: no visible global function definition for 'text'
jitter.points: no visible global function definition for 'rnorm'
level.plot: no visible global function definition for '.filled.contour'
map.scale: no visible global function definition for 'par'
map.scale: no visible global function definition for 'rect'
map.scale: no visible global function definition for 'lines'
map.scale: no visible global function definition for 'text'
map.scale: no visible global function definition for 'strheight'
north.arrow: no visible global function definition for 'polygon'
north.arrow: no visible global function definition for 'text'
north.arrow: no visible global function definition for 'strheight'
poly.labels: no visible global function definition for 'slot'
poly.labels : <anonymous>: no visible global function definition for
  'slot'
quantileCuts: no visible global function definition for 'quantile'
sdCuts: no visible global function definition for 'sd'
Undefined global functions or variables:
  .filled.contour legend lines par polygon quantile rect rnorm sd slot
  strheight strwidth text
Consider adding
  importFrom("graphics", ".filled.contour", "legend", "lines", "par",
             "polygon", "rect", "strheight", "strwidth", "text")
  importFrom("methods", "slot")
  importFrom("stats", "quantile", "rnorm", "sd")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gistr.Rcheck/00install.out' for details.
installed size is  7.9Mb
  sub-directories of 1Mb or more:
    libs   7.4Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gitgadget.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gitlabr.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/glancedata.Rcheck/00install.out' for details.
fptcdf: no visible global function definition for 'dnorm'
fptcdf: no visible global function definition for 'pnorm'
fptpdf: no visible global function definition for 'pnorm'
fptpdf: no visible global function definition for 'dnorm'
lba: no visible global function definition for 'as.formula'
lba: no visible global function definition for 'model.frame'
lba : logl: no visible global function definition for 'head'
lba: no visible global function definition for 'optim'
pmod: no visible global function definition for 'model.frame'
pmod: no visible global function definition for 'model.matrix'
rlba: no visible global function definition for 'pnorm'
rlba: no visible global function definition for 'rnorm'
rlba: no visible global function definition for 'runif'
tablba: no visible global function definition for 'pnorm'
Undefined global functions or variables:
  as.formula dnorm head model.frame model.matrix optim pnorm rnorm
  runif
Consider adding
  importFrom("stats", "as.formula", "dnorm", "model.frame",
             "model.matrix", "optim", "pnorm", "rnorm", "runif")
  importFrom("utils", "head")
to your NAMESPACE file.
installed size is 21.7Mb
  sub-directories of 1Mb or more:
    libs  20.6Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/glmaag.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/glmdisc.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/glmmfields.Rcheck/00install.out' for details.
installed size is 25.4Mb
  sub-directories of 1Mb or more:
    doc         1.2Mb
    libs       21.7Mb
    test_data   1.2Mb
Running examples in 'GlmSimulatoR-Ex.R' failed
The error most likely occurred in:

> ### Name: simulate_gaussian
> ### Title: Create ideal data for a generalized linear model.
> ### Aliases: simulate_gaussian simulate_binomial simulate_gamma
> ###   simulate_poisson simulate_inverse_gaussian simulate_negative_binomial
> ###   simulate_tweedie
> 
> ### ** Examples
> 
> library(GlmSimulatoR)
> library(ggplot2)
> library(MASS)
> 
> # Do glm and lm estimate the same weights? Yes
> set.seed(1)
> simdata <- simulate_gaussian()
Error: `map_dfc()` requires dplyr
Backtrace:
    x
 1. \-GlmSimulatoR::simulate_gaussian()
 2.   +-`%>%`(...)
 3.   | \-base::eval(lhs, parent, parent)
 4.   |   \-base::eval(lhs, parent, parent)
 5.   \-purrr::map_dfc(weights, create_predictor, n = N, xrange = xrange)
Execution halted
Running examples in 'glmtree-Ex.R' failed
The error most likely occurred in:

> ### Name: glmtree
> ### Title: Logistic regression tree by Stochastic-Expectation-Maximization
> ### Aliases: glmtree
> ### Keywords: glmtree
> 
> ### ** Examples
> 
> data = generateData(n = 100, scenario = "no tree")
> glmtree(x = data[,c("x1", "x2")], y = data$y, K = 5, iterations = 80, criterion = "aic")
The aic criterion for iteration 1 is -117.008295421939
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: glmtree ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'glmtree.Rmd' using rmarkdown
Warning: glm.fit: algorithm did not converge
Warning: glm.fit: fitted probabilities numerically 0 or 1 occurred
Warning: glm.fit: algorithm did not converge
Warning: glm.fit: fitted probabilities numerically 0 or 1 occurred
Quitting from lines 70-93 (glmtree.Rmd) 
Error: processing vignette 'glmtree.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'glmtree.Rmd'

SUMMARY: processing the following file failed:
  'glmtree.Rmd'

Error: Vignette re-building failed.
Execution halted
globalboosttest: no visible global function definition for 'predict'
globalboosttest: no visible global function definition for 'lm'
globalboosttest: no visible global function definition for 'glm'
globalboosttest: no visible binding for global variable 'binomial'
globalboosttest: no visible global function definition for 'points'
globalboosttest: no visible global function definition for 'AIC'
Undefined global functions or variables:
  AIC binomial glm lm points predict
Consider adding
  importFrom("graphics", "points")
  importFrom("stats", "AIC", "binomial", "glm", "lm", "predict")
to your NAMESPACE file.
prepare_Rd: globalboosttest.Rd:56: Dropping empty section \seealso
Malformed Description field: should contain one or more complete sentences.
.nPerms: no visible global function definition for 'terms'
expr.dev.test: no visible global function definition for 'terms'
expr.dev.test: no visible global function definition for 'model.matrix'
expr.dev.test: no visible global function definition for 'pchisq'
lancaster: no visible global function definition for 'pgamma'
liptak: no visible global function definition for 'pnorm'
summary.dev.test : ci: no visible global function definition for
  'qnorm'
varwiselogLik : <anonymous>: no visible global function definition for
  'deviance'
varwiselogLik.regression: no visible global function definition for
  'glm.fit'
Undefined global functions or variables:
  deviance glm.fit model.matrix pchisq pgamma pnorm qnorm terms
Consider adding
  importFrom("stats", "deviance", "glm.fit", "model.matrix", "pchisq",
             "pgamma", "pnorm", "qnorm", "terms")
to your NAMESPACE file.
Package suggested but not available for checking: 'cplexAPI'
Malformed Title field: should not end in a period.
CreateFormula: no visible global function definition for 'as.formula'
GeneratePvalues: no visible binding for global variable 'binomial'
globalARTP: no visible binding for global variable 'binomial'
globalFisher: no visible binding for global variable 'binomial'
globalFisher: no visible global function definition for 'pchisq'
globalSimes: no visible binding for global variable 'binomial'
pvalFmla: no visible binding for global variable 'binomial'
pvalFmla: no visible global function definition for 'glm'
pvalFmla: no visible global function definition for 'anova'
runPermut: no visible binding for global variable 'binomial'
runPvalues: no visible binding for global variable 'binomial'
Undefined global functions or variables:
  anova as.formula binomial glm pchisq
Consider adding
  importFrom("stats", "anova", "as.formula", "binomial", "glm", "pchisq")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
Malformed Description field: should contain one or more complete sentences.
ScoreTest: no visible global function definition for 'pchisq'
Var1: no visible global function definition for 'runif'
gLRT1: no visible global function definition for 'pchisq'
gLRT2: no visible global function definition for 'pchisq'
gLRT3: no visible global function definition for 'pchisq'
gLRT4: no visible global function definition for 'pf'
Undefined global functions or variables:
  pchisq pf runif
Consider adding
  importFrom("stats", "pchisq", "pf", "runif")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gluvarpro.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/GMDH2.Rcheck/00install.out' for details.
Found the following significant warnings:
  kmppini.cpp:241:14: warning: 'void* memcpy(void*, const void*, size_t)' forming offset [5, 8] is out of the bounds [0, 4] of object 'sed' with type 'std::size_t' {aka 'unsigned int'} [-Warray-bounds]
  kmppini.cpp:275:14: warning: 'void* memcpy(void*, const void*, size_t)' forming offset [5, 8] is out of the bounds [0, 4] of object 'sed' with type 'std::size_t' {aka 'unsigned int'} [-Warray-bounds]
See 'd:/Rcompile/CRANpkg/local/4.0/GMKMcharlie.Rcheck/00install.out' for details.
GNU make is a SystemRequirements.
Package suggested but not available for checking: 'doMC'
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: suppressMessages ... loadNamespace -> namespaceImport -> loadNamespace -> library.dynam
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for 'GMMAT' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
** DONE
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gmnl.Rcheck/00install.out' for details.
Running examples in 'gMOIP-Ex.R' failed
The error most likely occurred in:

> ### Name: addRays
> ### Title: Add all points on the bounding box hit by the rays.
> ### Aliases: addRays
> 
> ### ** Examples
> 
> pts <- genNDSet(3,10)
Warning in genSample(p, n, range = range, random = random, sphere = sphere,  :
  Only 9 samples generated!
> addRays(pts)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: addRays ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Running 'testthat.R' [3s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(gMOIP)
  > 
  > test_check("gMOIP")
  -- 1. Error: (unknown) (@test-hull.R#2)  ---------------------------------------
  package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::library(dplyr)
   2. base::tryCatch(...)
   3. base:::tryCatchList(expr, classes, parentenv, handlers)
   4. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   5. value[[3L]](cond)
  
  -- 2. Error: Correct classification of ND points (@test-ndset.R#5)  ------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. gMOIP::classifyNDSet(pts[, 1:3])
   2. gMOIP::convexHull(pts, addRays = TRUE, direction = direction)
   3. gMOIP::addRays(pts, direction = direction)
   4. dplyr::bind_rows
   5. base::getExportedValue(pkg, name)
   6. base::asNamespace(ns)
   7. base::getNamespace(ns)
   8. base::loadNamespace(name)
   9. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 0 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 2 ]
  1. Error: (unknown) (@test-hull.R#2) 
  2. Error: Correct classification of ND points (@test-ndset.R#5) 
  
  Error: testthat unit tests failed
  Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gms.Rcheck/00install.out' for details.
Packages listed in more than one of Depends, Imports, Suggests, Enhances:
  'GANPA' 'WGCNA'
A package should be listed in only one of these fields.
'library' or 'require' calls to packages already attached by Depends:
  'GANPA' 'WGCNA'
  Please remove these calls from your code.
Packages in Depends field not imported from:
  'GANPA' 'WGCNA'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
GOGANPA: no visible global function definition for 'GSE.Test.Main'
selectRho: no visible global function definition for
  'scaleFreeFitIndex'
Undefined global functions or variables:
  GSE.Test.Main scaleFreeFitIndex
Malformed Description field: should contain one or more complete sentences.
Packages in Depends field not imported from:
  'fGarch' 'fastICA'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
UprodR: no visible global function definition for 'combn'
goinit: no visible global function definition for 'as.formula'
ccor,GoGARCH : <anonymous>: no visible global function definition for
  'cov2cor'
ccor,Gopredict : <anonymous>: no visible global function definition for
  'cov2cor'
goest,Goestica: no visible global function definition for 'fastICA'
goest,Goestml: no visible global function definition for 'nlminb'
goest,Goestmm : <anonymous>: no visible global function definition for
  'combn'
goest,Goestnls: no visible global function definition for 'optim'
show,Goinit: no visible global function definition for 'head'
show,Gopredict: no visible global function definition for 'head'
update,GoGARCH: no visible global function definition for
  'update.formula'
update,Goestica: no visible global function definition for
  'update.formula'
update,Goestml: no visible global function definition for
  'update.formula'
update,Goestmm: no visible global function definition for
  'update.formula'
update,Goestnls: no visible global function definition for
  'update.formula'
Undefined global functions or variables:
  as.formula combn cov2cor fastICA head nlminb optim update.formula
Consider adding
  importFrom("stats", "as.formula", "cov2cor", "nlminb", "optim",
             "update.formula")
  importFrom("utils", "combn", "head")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/goldi.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/googleAnalyticsR.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/googlenlp.Rcheck/00install.out' for details.
Found the following sources/headers not terminated with a newline:
  inst/include/googlePolylines.h
  inst/include/variants.h
Some compilers warn on such files.
Package vignette with placeholder title 'Vignette Title':
  'sfencode.Rmd'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/googlesheets.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/goxygen.Rcheck/00install.out' for details.
Random.Start: no visible global function definition for 'rnorm'
Undefined global functions or variables:
  rnorm
Consider adding
  importFrom("stats", "rnorm")
to your NAMESPACE file.
CumulativeVarPlot: no visible global function definition for 'axis'
PCplot: no visible global function definition for 'par'
PCplot: no visible global function definition for 'rainbow'
PCplot: no visible global function definition for 'density'
gDist: no visible global function definition for 'density'
gDist: no visible global function definition for 'abline'
gPCA.batchdetect: no visible global function definition for 'var'
Undefined global functions or variables:
  abline axis density par rainbow var
Consider adding
  importFrom("grDevices", "rainbow")
  importFrom("graphics", "abline", "axis", "par")
  importFrom("stats", "density", "var")
to your NAMESPACE file.
The following files are already in R: 'Sweave.sty'
Please remove them from your package.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/GPCMlasso.Rcheck/00install.out' for details.
Namespaces with empty importFrom:
  'scatterplot3d' 'sqldf'
Resdata : prepdata: no visible global function definition for 'sqldf'
gpca : Build3d: no visible global function definition for 'dev.new'
gpca : Build3d: no visible global function definition for
  'scatterplot3d'
gpca : Build3d: no visible global function definition for 'text'
gpca : Build3d: no visible global function definition for 'abline'
gpca : Build3d: no visible global function definition for 'rect'
gpca: no visible global function definition for 'cor'
gpca: no visible global function definition for 'dev.new'
gpca: no visible global function definition for 'text'
gpca: no visible global function definition for 'abline'
gpca: no visible global function definition for 'rect'
gpca: no visible global function definition for 'scatterplot3d'
gpca: no visible global function definition for 'segments'
gpca: no visible global function definition for 'points'
gpca: no visible global function definition for 'write.table'
Undefined global functions or variables:
  abline cor dev.new points rect scatterplot3d segments sqldf text
  write.table
Consider adding
  importFrom("grDevices", "dev.new")
  importFrom("graphics", "abline", "points", "rect", "segments", "text")
  importFrom("stats", "cor")
  importFrom("utils", "write.table")
to your NAMESPACE file.
.r1: no visible global function definition for 'cor'
.r2: no visible global function definition for 'cor'
rgp: no visible global function definition for 'runif'
rgp: no visible global function definition for 'rexp'
Undefined global functions or variables:
  cor rexp runif
Consider adding
  importFrom("stats", "cor", "rexp", "runif")
to your NAMESPACE file.
gpfr: no visible global function definition for 'rnorm'
gpfr: no visible global function definition for 'runif'
gpfrpred : <anonymous>: no visible global function definition for
  'predict'
gpfrtrain: no visible global function definition for 'nlminb'
gppredict: no visible global function definition for 'predict'
gpr: no visible global function definition for 'rnorm'
gpr: no visible global function definition for 'runif'
gpr: no visible global function definition for 'lm'
gpr: no visible global function definition for 'resid'
gpr: no visible global function definition for 'nlminb'
main1: no visible global function definition for 'lm'
main1: no visible global function definition for 'resid'
main2 : <anonymous>: no visible global function definition for
  'predict'
main2: no visible global function definition for 'predict'
main3: no visible global function definition for 'lm'
main3: no visible global function definition for 'resid'
plot.gpfr: no visible global function definition for 'polygon'
plot.gpfr: no visible global function definition for 'rgb'
plot.gpfr: no visible global function definition for 'matpoints'
plot.gpfr: no visible global function definition for 'matlines'
plot.gpfr: no visible global function definition for 'lines'
plot.gpr: no visible global function definition for 'polygon'
plot.gpr: no visible global function definition for 'rgb'
plot.gpr: no visible global function definition for 'points'
plot.gpr: no visible global function definition for 'lines'
Undefined global functions or variables:
  lines lm matlines matpoints nlminb points polygon predict resid rgb
  rnorm runif
Consider adding
  importFrom("grDevices", "rgb")
  importFrom("graphics", "lines", "matlines", "matpoints", "points",
             "polygon")
  importFrom("stats", "lm", "nlminb", "predict", "resid", "rnorm",
             "runif")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
Checking should be performed on sources prepared by 'R CMD build'.
Packages in Depends field not imported from:
  'foreach' 'ggplot2' 'isotone' 'plyr'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
installed size is  5.5Mb
  sub-directories of 1Mb or more:
    data   1.6Mb
    doc    3.5Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/GPSCDF.Rcheck/00install.out' for details.
BugReports field is not a suitable URL but appears to contain an email address
  not specified by mailto: nor contained in < >
   use the Contact field instead
Malformed Title field: should not end in a period.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/GRANBase.Rcheck/00install.out' for details.
'library' or 'require' calls in package code:
  'mgcv' 'rgl' 'tcltk'
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
KL: no visible global function definition for 'complete.cases'
MergeNodes: no visible global function definition for 'colors'
cross.validate: no visible global function definition for 'runif'
fit.APFA: no visible global function definition for 'complete.cases'
fit.APFA: no visible global function definition for 'aggregate'
select.beagle: no visible global function definition for 'write.table'
select.beagle: no visible global function definition for 'aggregate'
select.beagle: no visible global function definition for 'colors'
simulateAPFA: no visible global function definition for 'runif'
st: no visible global function definition for 'colors'
Undefined global functions or variables:
  aggregate colors complete.cases runif write.table
Consider adding
  importFrom("grDevices", "colors")
  importFrom("stats", "aggregate", "complete.cases", "runif")
  importFrom("utils", "write.table")
to your NAMESPACE file.
Error in .requirePackage(package) : 
  unable to find required package 'adegenet'
Calls: <Anonymous> ... withCallingHandlers -> is -> getClassDef -> .requirePackage
Execution halted
All user-level objects in a package should have documentation entries.
See chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.
Error loading dataset 'data_ex_genind':
   Error in .requirePackage(package) : 
    unable to find required package 'adegenet'
  
  Error loading dataset 'data_simul_genind':
   Error in .requirePackage(package) : 
    unable to find required package 'adegenet'
  
  The dataset(s) may use package(s) not declared in Depends/Imports.
Running examples in 'graph4lg-Ex.R' failed
The error most likely occurred in:

> ### Name: compute_node_metric
> ### Title: Compute graph-theoretic metrics from a graph at the node level
> ### Aliases: compute_node_metric
> 
> ### ** Examples
> 
> data(data_ex_genind)
> mat_gen <- mat_gen_dist(x = data_ex_genind, dist = "DPS")
Loading required package: adegenet
Loading required package: ade4
Error: package or namespace load failed for 'adegenet' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Error in .requirePackage(package) : 
  unable to find required package 'adegenet'
Calls: mat_gen_dist ... .extendsForS3 -> extends -> getClassDef -> .requirePackage
Execution halted
Error(s) in re-building vignettes:
--- re-building 'genetic_graph_2.Rmd' using rmarkdown
--- finished re-building 'genetic_graph_2.Rmd'

--- re-building 'graph_comparisons_4.Rmd' using rmarkdown
--- finished re-building 'graph_comparisons_4.Rmd'

--- re-building 'input_data_processing_1.Rmd' using rmarkdown
Quitting from lines 86-91 (input_data_processing_1.Rmd) 
Error: processing vignette 'input_data_processing_1.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'input_data_processing_1.Rmd'

--- re-building 'landscape_graph_3.Rmd' using rmarkdown
--- finished re-building 'landscape_graph_3.Rmd'

SUMMARY: processing the following file failed:
  'input_data_processing_1.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/graphframes.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/graphicalVAR.Rcheck/00install.out' for details.
Running examples in 'graphlayouts-Ex.R' failed
The error most likely occurred in:

> ### Name: annotate_circle
> ### Title: annotate concentric circles
> ### Aliases: annotate_circle
> 
> ### ** Examples
> 
> library(igraph)

Attaching package: 'igraph'

The following objects are masked from 'package:stats':

    decompose, spectrum

The following object is masked from 'package:base':

    union

> library(ggraph)
Loading required package: ggplot2
Error: package or namespace load failed for 'ggraph' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/graphTweets.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
Package in Depends field not imported from: 'Matrix'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
GrassmannOptim: no visible global function definition for 'rnorm'
GrassmannOptim: no visible global function definition for 'runif'
GrassmannOptim : <anonymous>: no visible global function definition for
  'expm'
GrassmannOptim : <anonymous>: no visible global function definition for
  'Matrix'
Undefined global functions or variables:
  Matrix expm rnorm runif
Consider adding
  importFrom("stats", "rnorm", "runif")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gratia.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gratis.Rcheck/00install.out' for details.
Packages suggested but not available for checking:
  'taxstats', 'taxstats1516'
Running examples in 'gravitas-Ex.R' failed
The error most likely occurred in:

> ### Name: create_gran
> ### Title: Build dynamic temporal granularities
> ### Aliases: create_gran
> 
> ### ** Examples
> 
> library(dplyr)
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Error(s) in re-building vignettes:
--- re-building 'cricket.Rmd' using rmarkdown
Quitting from lines 14-28 (cricket.Rmd) 
Error: processing vignette 'cricket.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'cricket.Rmd'

--- re-building 'gravitas_vignette.Rmd' using rmarkdown
Quitting from lines 14-28 (gravitas_vignette.Rmd) 
Error: processing vignette 'gravitas_vignette.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'gravitas_vignette.Rmd'

SUMMARY: processing the following files failed:
  'cricket.Rmd' 'gravitas_vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gravity.Rcheck/00install.out' for details.
installed size is  5.2Mb
  sub-directories of 1Mb or more:
    libs   3.3Mb
Running examples in 'Greg-Ex.R' failed
The error most likely occurred in:

> ### Name: addNonlinearity
> ### Title: Add a nonlinear function to the model
> ### Aliases: addNonlinearity addNonlinearity.negbin
> 
> ### ** Examples
> 
> library(Greg)
> library(magrittr)
> data("melanoma", package = "boot", envir = environment())
> 
> library(dplyr)
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Running 'test-interval-timeSplitter.R' [7s]
  Running 'test-nonlin_4_coxph.R' [5s]
  Running 'testthat.R' [17s]
Running the tests in 'tests/test-nonlin_4_coxph.R' failed.
Complete output:
  > library(Greg)
  Loading required package: forestplot
  Loading required package: grid
  Loading required package: magrittr
  Loading required package: checkmate
  Loading required package: Gmisc
  Loading required package: Rcpp
  Loading required package: htmlTable
  > library(magrittr)
  > data("melanoma", package = "boot", envir = environment())
  > 
  > library(dplyr)
  Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Execution halted
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(Greg)
  Loading required package: forestplot
  Loading required package: grid
  Loading required package: magrittr
  
  Attaching package: 'magrittr'
  
  The following objects are masked from 'package:testthat':
  
      equals, is_less_than, not
  
  Loading required package: checkmate
  Loading required package: Gmisc
  Loading required package: Rcpp
  Loading required package: htmlTable
  > 
  > test_check("Greg")
  -- 1. Error: (unknown) (@test-timeSplitter.R#5)  -------------------------------
  package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::library(dplyr)
   2. base::tryCatch(...)
   3. base:::tryCatchList(expr, classes, parentenv, handlers)
   4. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   5. value[[3L]](cond)
  
  == testthat results  ===========================================================
  [ OK: 270 | SKIPPED: 2 | WARNINGS: 6 | FAILED: 1 ]
  1. Error: (unknown) (@test-timeSplitter.R#5) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'printCrudeAndAdjustedModel.Rmd' using rmarkdown
Loading required package: forestplot
Loading required package: grid
Loading required package: magrittr
Loading required package: checkmate
Loading required package: Gmisc
Loading required package: Rcpp
Loading required package: htmlTable
Loading required package: lattice
Loading required package: survival
Loading required package: Formula
Loading required package: ggplot2

Attaching package: 'Hmisc'

The following objects are masked from 'package:base':

    format.pval, units

--- finished re-building 'printCrudeAndAdjustedModel.Rmd'

--- re-building 'timeSplitter.Rmd' using rmarkdown
Loading required package: forestplot
Loading required package: grid
Loading required package: checkmate
Loading required package: Gmisc
Loading required package: Rcpp
Loading required package: htmlTable
Quitting from lines 277-288 (timeSplitter.Rmd) 
Error: processing vignette 'timeSplitter.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'timeSplitter.Rmd'

SUMMARY: processing the following file failed:
  'timeSplitter.Rmd'

Error: Vignette re-building failed.
Execution halted
accrualReport: multiple local function definitions for 'gg' with
  different formal arguments
Package suggested but not available for checking: 'doMC'
bestcut2: no visible global function definition for 'pchisq'
cov.func: no visible global function definition for 'rbinom'
cov.func: no visible global function definition for 'cov'
cov.func: no visible global function definition for 'pnorm'
cox.summary: no visible global function definition for 'predict'
em.func: no visible global function definition for 'quantile'
genSurvData: no visible global function definition for 'rweibull'
greyzone.func: no visible global function definition for 'points'
greyzone.func: no visible global function definition for 'abline'
Undefined global functions or variables:
  abline cov pchisq pnorm points predict quantile rbinom rweibull
Consider adding
  importFrom("graphics", "abline", "points")
  importFrom("stats", "cov", "pchisq", "pnorm", "predict", "quantile",
             "rbinom", "rweibull")
to your NAMESPACE file.
GNU make is a SystemRequirements.
Malformed Description field: should contain one or more complete sentences.
grid.graph: no visible global function definition for 'is'
Undefined global functions or variables:
  is
Consider adding
  importFrom("methods", "is")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Package in Depends field not imported from: 'spatstat'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
GriegSmith: no visible global function definition for 'is.ppp'
envelopes: no visible binding for global variable 'quantile'
plot.GriegSmith: no visible global function definition for 'lines'
plot.GriegSmith: no visible global function definition for 'axis'
Undefined global functions or variables:
  axis is.ppp lines quantile
Consider adding
  importFrom("graphics", "axis", "lines")
  importFrom("stats", "quantile")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/grizbayr.Rcheck/00install.out' for details.
Running examples in 'grobblR-Ex.R' failed
The error most likely occurred in:

> ### Name: add_aesthetic
> ### Title: Add an Aesthetic
> ### Aliases: add_aesthetic
> 
> ### ** Examples
> 
> 
> df = data.frame(var1 = c(5, 14, 6, 10), var2 = c(3, 30, 17, 7))
> df %>%
+   grob_matrix() %>% 
+   add_aesthetic(aesthetic = 'text_color', value = 'red', group = 'cells') %>%
+   view_grob()
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: %>% ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'grob_layout.Rmd' using rmarkdown
Quitting from lines 35-53 (grob_layout.Rmd) 
Error: processing vignette 'grob_layout.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'grob_layout.Rmd'

--- re-building 'grob_matrix.Rmd' using rmarkdown
Quitting from lines 45-52 (grob_matrix.Rmd) 
Error: processing vignette 'grob_matrix.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'grob_matrix.Rmd'

--- re-building 'grobblR.Rmd' using rmarkdown
Quitting from lines 50-59 (grobblR.Rmd) 
Error: processing vignette 'grobblR.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'grobblR.Rmd'

SUMMARY: processing the following files failed:
  'grob_layout.Rmd' 'grob_matrix.Rmd' 'grobblR.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/groupdata2.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/groupedstats.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
PCgamma : <anonymous>: no visible global function definition for
  'prcomp'
PCgamma : <anonymous> : <anonymous>: no visible global function
  definition for 'glm'
PCgamma : <anonymous> : <anonymous>: no visible global function
  definition for 'update'
PCgamma : <anonymous> : <anonymous>: no visible global function
  definition for 'pchisq'
PCgamma : <anonymous> : <anonymous>: no visible global function
  definition for 'lm'
PCgamma : <anonymous> : <anonymous>: no visible global function
  definition for 'anova'
PCgamma: no visible global function definition for 'qgamma'
PCgamma: no visible global function definition for 'pgamma'
RNAgamma : rnafunc: no visible global function definition for
  'model.matrix'
RNAgamma : rnafunc: no visible global function definition for
  'as.formula'
RNAgamma: no visible global function definition for 'qgamma'
RNAgamma: no visible global function definition for 'pgamma'
STTtoShapeParameter : f: no visible global function definition for
  'qgamma'
STTtoShapeParameter: no visible global function definition for
  'optimize'
Undefined global functions or variables:
  anova as.formula glm lm model.matrix optimize pchisq pgamma prcomp
  qgamma update
Consider adding
  importFrom("stats", "anova", "as.formula", "glm", "lm", "model.matrix",
             "optimize", "pchisq", "pgamma", "prcomp", "qgamma",
             "update")
to your NAMESPACE file.
.gsa.assignGATKTableToEnvironment: no visible global function
  definition for 'type.convert'
Undefined global functions or variables:
  type.convert
Consider adding
  importFrom("utils", "type.convert")
to your NAMESPACE file.
'library' or 'require' call to 'impute' in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
GSA: no visible global function definition for 'impute.knn'
Undefined global functions or variables:
  impute.knn
Package suggested but not available for checking: 'dse1'
garsim: no visible global function definition for 'rnorm'
garsim: no visible global function definition for 'rpois'
Undefined global functions or variables:
  rnorm rpois
Consider adding
  importFrom("stats", "rnorm", "rpois")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gsbDesign.Rcheck/00install.out' for details.
Error(s) in re-building vignettes:
--- re-building 'Introduction_gscounts.Rmd' using rmarkdown
Quitting from lines 261-285 (Introduction_gscounts.Rmd) 
Error: processing vignette 'Introduction_gscounts.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'Introduction_gscounts.Rmd'

SUMMARY: processing the following file failed:
  'Introduction_gscounts.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gsDesign.Rcheck/00install.out' for details.
binding: no visible global function definition for 'rnorm'
binding: no visible binding for global variable 'var'
binding: no visible global function definition for 'uniroot'
equivonly: no visible global function definition for 'rnorm'
equivonly: no visible binding for global variable 'var'
equivonly: no visible global function definition for 'uniroot'
figureE: no visible global function definition for 'rgb'
figureEF: no visible global function definition for 'rgb'
nfix : f: no visible global function definition for 'pnorm'
nfix : f: no visible global function definition for 'qnorm'
nfix: no visible global function definition for 'uniroot'
nonbinding: no visible global function definition for 'rnorm'
nonbinding: no visible binding for global variable 'var'
nonbinding: no visible global function definition for 'uniroot'
oc: no visible global function definition for 'rnorm'
oc: no visible global function definition for 'var'
Undefined global functions or variables:
  pnorm qnorm rgb rnorm uniroot var
Consider adding
  importFrom("grDevices", "rgb")
  importFrom("stats", "pnorm", "qnorm", "rnorm", "uniroot", "var")
to your NAMESPACE file.
Running examples in 'GSIF-Ex.R' failed
The error most likely occurred in:

> ### Name: fit.regModel-methods
> ### Title: Fits a regression model to spatial data
> ### Aliases: fit.regModel
> ###   fit.regModel,formula,data.frame,SpatialPixelsDataFrame,character-method
> 
> ### ** Examples
> 
> library(sp)
> library(rpart)
> library(nlme)
> library(gstat)
> library(randomForest)
randomForest 4.6-14
Type rfNews() to see new features/changes/bug fixes.
> library(quantregForest)
Loading required package: RColorBrewer
> library(xgboost)
> library(caret)
Loading required package: lattice
Loading required package: ggplot2

Attaching package: 'ggplot2'

The following object is masked from 'package:randomForest':

    margin

Error: package or namespace load failed for 'caret' in inDL(x, as.logical(local), as.logical(now), ...):
 unable to load shared object 'D:/temp/RtmpuYWgA3/RLIBS_143406edb21/dplyr/libs/x64/dplyr.dll':
  LoadLibrary failure:  Das angegebene Modul wurde nicht gefunden.
Execution halted
Namespaces with empty importFrom:
  'gee' 'geepack'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gskat.Rcheck/00install.out' for details.
Package vignette with placeholder title 'Vignette Title':
  'Introduction.Rmd'
Malformed Description field: should contain one or more complete sentences.
gte: no visible global function definition for 'model.extract'
gte: no visible global function definition for 'model.matrix'
gte: no visible binding for global variable 'sd'
gte: no visible global function definition for 'dnorm'
plot.gte: no visible global function definition for 'par'
plot.gte: no visible global function definition for 'polygon'
plot.gte: no visible global function definition for 'gray'
plot.gte: no visible global function definition for 'lines'
plot.gte: no visible global function definition for 'legend'
Undefined global functions or variables:
  dnorm gray legend lines model.extract model.matrix par polygon sd
Consider adding
  importFrom("grDevices", "gray")
  importFrom("graphics", "legend", "lines", "par", "polygon")
  importFrom("stats", "dnorm", "model.extract", "model.matrix", "sd")
to your NAMESPACE file.
Running examples in 'gtfs2gps-Ex.R' failed
The error most likely occurred in:

> ### Name: append_height
> ### Title: Add a column with height to GPS data
> ### Aliases: append_height
> 
> ### ** Examples
> 
> library(dplyr)
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Found the following possibly unsafe calls:
File 'gtools/R/unByteCode.R':
  unlockBinding(name, env = env)
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gt.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/guardianapi.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/GuessCompx.Rcheck/00install.out' for details.
Package vignette with placeholder title 'Vignette Title':
  'GUILDS.Rmd'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gunsales.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gutenbergr.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gvcR.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gwdegree.Rcheck/00install.out' for details.
calculate.threshold: no visible global function definition for 'pchisq'
gwerAM: no visible global function definition for 'rnorm'
gwerAM: no visible binding for global variable 'quantile'
Undefined global functions or variables:
  pchisq quantile rnorm
Consider adding
  importFrom("stats", "pchisq", "quantile", "rnorm")
to your NAMESPACE file.
normalweight: no visible binding for global variable 'NW_above'
normalweight: no visible binding for global variable 'NW_below'
obese: no visible global function definition for 'data'
obese: no visible binding for global variable 'OB_above'
obese: no visible binding for global variable 'OB_below'
overweight: no visible global function definition for 'data'
overweight: no visible binding for global variable 'OW_above'
overweight: no visible binding for global variable 'OW_below'
Undefined global functions or variables:
  NW_above NW_below OB_above OB_below OW_above OW_below data
Consider adding
  importFrom("utils", "data")
to your NAMESPACE file.
installed size is  7.1Mb
  sub-directories of 1Mb or more:
    data   3.9Mb
    libs   2.4Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/GWpcor.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/gWQS.Rcheck/00install.out' for details.
'library' or 'require' calls to packages already attached by Depends:
  'fields' 'lars'
  Please remove these calls from your code.
Package in Depends field not imported from: 'lars'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
gwl.beta: no visible global function definition for 'lars'
gwl.cv.err: no visible global function definition for 'lars'
gwl.est: no visible global function definition for 'lm'
gwr.bw.est: no visible global function definition for 'lm'
gwr.est: no visible global function definition for 'lm'
gwr.rsquare: no visible global function definition for 'cor'
gwrr.est: no visible global function definition for 'lm'
Undefined global functions or variables:
  cor lars lm
Consider adding
  importFrom("stats", "cor", "lm")
to your NAMESPACE file.
installed size is  6.2Mb
  sub-directories of 1Mb or more:
    libs   4.5Mb
GxMestimator: no visible global function definition for 'na.omit'
initialization_chol: no visible global function definition for 'cov'
initialization_corr: no visible global function definition for 'cov'
initialization_nlmain: no visible global function definition for
  'lm.fit'
print.summaryGxMclass: no visible global function definition for
  'pnorm'
print.summaryGxMclass: no visible global function definition for
  'printCoefmat'
Undefined global functions or variables:
  cov lm.fit na.omit pnorm printCoefmat
Consider adding
  importFrom("stats", "cov", "lm.fit", "na.omit", "pnorm",
             "printCoefmat")
to your NAMESPACE file.
installed size is 134.3Mb
  sub-directories of 1Mb or more:
    R       1.0Mb
    java  132.1Mb
Malformed Description field: should contain one or more complete sentences.
hf.bt: no visible global function definition for 'median'
Undefined global functions or variables:
  median
Consider adding
  importFrom("stats", "median")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/hablar.Rcheck/00install.out' for details.
Running examples in 'hacksaw-Ex.R' failed
The error most likely occurred in:

> ### Name: cast_character
> ### Title: Cast columns to a specified data type
> ### Aliases: cast_character cast_numeric cast_logical
> 
> ### ** Examples
> 
> library(dplyr)
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Running 'testthat.R' [2s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(hacksaw)
  > 
  > test_check("hacksaw")
  -- 1. Error: keep_na returns the correct result (@test-keep_na.R#4)  -----------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. hacksaw::keep_na(df, x)
   2. dplyr::select
   3. base::getExportedValue(pkg, name)
   4. base::asNamespace(ns)
   5. base::getNamespace(ns)
   6. base::loadNamespace(name)
   7. base::library.dynam(lib, package, package.lib)
  
  -- 2. Error: keep_na selects all columns (@test-keep_na.R#9)  ------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. testthat::expect_equal(nrow(keep_na(df)), 1)
    5. hacksaw::keep_na(df)
    9. dplyr::intersect
   10. base::getExportedValue(pkg, name)
   11. base::asNamespace(ns)
   12. base::getNamespace(ns)
   13. base::loadNamespace(name)
   14. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 4 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 2 ]
  1. Error: keep_na returns the correct result (@test-keep_na.R#4) 
  2. Error: keep_na selects all columns (@test-keep_na.R#9) 
  
  Error: testthat unit tests failed
  Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/HACSim.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/HaDeX.Rcheck/00install.out' for details.
hsTableReader: no visible global function definition for 'object.size'
hsWriteTable: no visible global function definition for 'write.table'
Undefined global functions or variables:
  object.size write.table
Consider adding
  importFrom("utils", "object.size", "write.table")
to your NAMESPACE file.
installed size is  6.1Mb
  sub-directories of 1Mb or more:
    data   1.3Mb
    libs   2.4Mb
Running 'testthat.R' [4s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(haldensify)
  haldensify v0.0.5: Highly Adaptive Lasso Conditional Density Estimation
  > 
  > test_check("haldensify")
  -- 1. Error: (unknown) (@test-density_standard.R#3)  ---------------------------
  package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::library(dplyr)
   2. base::tryCatch(...)
   3. base:::tryCatchList(expr, classes, parentenv, handlers)
   4. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   5. value[[3L]](cond)
  
  -- 2. Error: (unknown) (@test-density_weights.R#3)  ----------------------------
  package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::library(dplyr)
   2. base::tryCatch(...)
   3. base:::tryCatchList(expr, classes, parentenv, handlers)
   4. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   5. value[[3L]](cond)
  
  == testthat results  ===========================================================
  [ OK: 0 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 2 ]
  1. Error: (unknown) (@test-density_standard.R#3) 
  2. Error: (unknown) (@test-density_weights.R#3) 
  
  Error: testthat unit tests failed
  Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/hansard.Rcheck/00install.out' for details.
EMvar: no visible global function definition for 'model.matrix'
RecodeHaplos: no visible global function definition for 'na.omit'
RecodeHaplos: no visible global function definition for 'tail'
anova.hapassoc: no visible global function definition for 'pchisq'
handleMissings: no visible global function definition for 'na.omit'
hapassoc: no visible global function definition for 'binomial'
hapassoc: no visible global function definition for 'formula'
hapassoc: no visible global function definition for 'glm'
hapassoc : <anonymous>: no visible global function definition for 'glm'
hapassoc: no visible global function definition for 'model.frame'
hapassoc: no visible global function definition for 'model.matrix'
hapassoc: no visible binding for global variable 'contrasts'
hapassoc: no visible global function definition for 'glm.control'
hapassoc : <anonymous>: no visible global function definition for
  'glm.control'
probY: no visible global function definition for 'dbinom'
probY: no visible global function definition for 'dpois'
probY: no visible global function definition for 'dnorm'
probY: no visible global function definition for 'dgamma'
summary.hapassoc: no visible global function definition for 'pchisq'
Undefined global functions or variables:
  binomial contrasts dbinom dgamma dnorm dpois formula glm glm.control
  model.frame model.matrix na.omit pchisq tail
Consider adding
  importFrom("stats", "binomial", "contrasts", "dbinom", "dgamma",
             "dnorm", "dpois", "formula", "glm", "glm.control",
             "model.frame", "model.matrix", "na.omit", "pchisq")
  importFrom("utils", "tail")
to your NAMESPACE file.
allele.marq: no visible global function definition for 'na.omit'
depart.LDL: no visible global function definition for 'aov'
freq.all: no visible global function definition for 'na.omit'
hapim.LD.add: no visible global function definition for 'optim'
hapim.LDL.add: no visible global function definition for 'optim'
obj.haplomax.HS.add: no visible global function definition for 'aov'
obj.haplomax.add: no visible global function definition for 'aov'
vrais.LD.add: no visible global function definition for 'dnorm'
vrais.LDL.add.pere: no visible global function definition for 'dnorm'
Undefined global functions or variables:
  aov dnorm na.omit optim
Consider adding
  importFrom("stats", "aov", "dnorm", "na.omit", "optim")
to your NAMESPACE file.
Missing or unexported object: 'ff::levels.ff'
Running examples in 'Haplin-Ex.R' failed
The error most likely occurred in:

> ### Name: genDataGetPart
> ### Title: Extracting part of genetic data.
> ### Aliases: genDataGetPart
> 
> ### ** Examples
> 
>   # The argument 'overwrite' is set to TRUE!
>   # Read the data:
>   examples.dir <- system.file( "extdata", package = "Haplin" )
>   example.file <- file.path( examples.dir, "HAPLIN.trialdata2.txt" )
>   my.gen.data.read <- genDataRead( file.in = example.file, file.out = "trial_data",
+    dir.out = tempdir( check = TRUE ), format = "haplin", allele.sep = "", n.vars = 2,
+    cov.header = c( "smoking", "sex" ), overwrite = TRUE )
Read 8 items
Reading the data in chunks...
 -- chunk 1 --
Read 9112 items
 -- chunk 2 -- 
Read 0 items
... done reading.
Reading the marker names... 
Warning: No map file given, map file empty or the number of map file rows not equal to the number of markers in data; will generate dummy marker names.
...done
Preparing data...
... done preparing
Saving data...
... saved to files: D:\temp\RtmpGyKEhi/trial_data_gen.ffData, D:\temp\RtmpGyKEhi/trial_data_gen.RData
>   my.gen.data.read
This is raw genetic data read in through genDataRead.

It contains the following parts:
   cov.data, gen.data, aux 

with following dimensions:
  - covariate variables =  smoking, sex 
      (total  2  covariate variables),
  - number of markers =  2 ,
  - number of data lines =  1139 
>   # Extract part with only men:
>   men.subset <- genDataGetPart( my.gen.data.read, design = "triad", sex = 1,
+     dir.out = tempdir( check = TRUE ), file.out = "gen_data_men_only", overwrite = TRUE )
Provided arguments:
 --- argument: sex, chosen values: 1
INFO: Will select 377 rows and 12 columns.
opening ff D:/temp/RtmpGyKEhi/ff/ff2ab0027696a97.ff
Error: 'levels.ff' is not an exported object from 'namespace:ff'
Execution halted
Running examples in 'Haplin-Ex.R' failed
The error most likely occurred in:

> ### Name: genDataGetPart
> ### Title: Extracting part of genetic data.
> ### Aliases: genDataGetPart
> 
> ### ** Examples
> 
>   # The argument 'overwrite' is set to TRUE!
>   # Read the data:
>   examples.dir <- system.file( "extdata", package = "Haplin" )
>   example.file <- file.path( examples.dir, "HAPLIN.trialdata2.txt" )
>   my.gen.data.read <- genDataRead( file.in = example.file, file.out = "trial_data",
+    dir.out = tempdir( check = TRUE ), format = "haplin", allele.sep = "", n.vars = 2,
+    cov.header = c( "smoking", "sex" ), overwrite = TRUE )
Read 8 items
Reading the data in chunks...
 -- chunk 1 --
Read 9112 items
 -- chunk 2 -- 
Read 0 items
... done reading.
Reading the marker names... 
Warning: No map file given, map file empty or the number of map file rows not equal to the number of markers in data; will generate dummy marker names.
...done
Preparing data...
... done preparing
Saving data...
... saved to files: D:\temp\RtmpkHH0lq/trial_data_gen.ffData, D:\temp\RtmpkHH0lq/trial_data_gen.RData
>   my.gen.data.read
This is raw genetic data read in through genDataRead.

It contains the following parts:
   cov.data, gen.data, aux 

with following dimensions:
  - covariate variables =  smoking, sex 
      (total  2  covariate variables),
  - number of markers =  2 ,
  - number of data lines =  1139 
>   # Extract part with only men:
>   men.subset <- genDataGetPart( my.gen.data.read, design = "triad", sex = 1,
+     dir.out = tempdir( check = TRUE ), file.out = "gen_data_men_only", overwrite = TRUE )
Provided arguments:
 --- argument: sex, chosen values: 1
INFO: Will select 377 rows and 12 columns.
opening ff D:/temp/RtmpkHH0lq/ff/ff9adc61995a12.ff
Error: 'levels.ff' is not an exported object from 'namespace:ff'
Execution halted
installed size is  9.8Mb
  sub-directories of 1Mb or more:
    data   9.4Mb
AssignQTL : <anonymous>: no visible global function definition for
  'rgamma'
AssignSingleQTL: no visible global function definition for 'rgamma'
ListQTL : <anonymous>: no visible global function definition for
  'rgamma'
SampleBaseHaplotype: no visible global function definition for 'runif'
SampleHaplotype: no visible global function definition for 'rpois'
SampleHaplotype: no visible global function definition for 'runif'
SampleHaplotype: no visible global function definition for 'rbinom'
Undefined global functions or variables:
  rbinom rgamma rpois runif
Consider adding
  importFrom("stats", "rbinom", "rgamma", "rpois", "runif")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/happybiRthday.Rcheck/00install.out' for details.
Running examples in 'hardhat-Ex.R' failed
The error most likely occurred in:

> ### Name: default_recipe_blueprint
> ### Title: Default recipe blueprint
> ### Aliases: default_recipe_blueprint mold.recipe
> 
> ### ** Examples
> 
> library(recipes)
Loading required package: dplyr
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Error: package 'dplyr' could not be loaded
Execution halted
Error(s) in re-building vignettes:
--- re-building 'forge.Rmd' using rmarkdown
Loading required package: dplyr
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Quitting from lines 165-173 (forge.Rmd) 
Error: processing vignette 'forge.Rmd' failed with diagnostics:
package 'dplyr' could not be loaded
--- failed re-building 'forge.Rmd'

--- re-building 'mold.Rmd' using rmarkdown
Loading required package: dplyr
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Quitting from lines 215-226 (mold.Rmd) 
Error: processing vignette 'mold.Rmd' failed with diagnostics:
package 'dplyr' could not be loaded
--- failed re-building 'mold.Rmd'

--- re-building 'package.Rmd' using rmarkdown
Loading required package: dplyr
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Quitting from lines 280-292 (package.Rmd) 
Error: processing vignette 'package.Rmd' failed with diagnostics:
package 'dplyr' could not be loaded
--- failed re-building 'package.Rmd'

SUMMARY: processing the following files failed:
  'forge.Rmd' 'mold.Rmd' 'package.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/HardyWeinberg.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/harrietr.Rcheck/00install.out' for details.
Namespace with empty importFrom: 'utils'
File
  LICENSE
is not mentioned in the DESCRIPTION file.
GNU make is a SystemRequirements.
Running 'testthat.R' [8s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(hazer)
  > 
  > test_check("hazer")
  -- 1. Failure: test the haze (@testall.R#22)  ----------------------------------
  floor(h$haze * 1000) not equal to ifelse(tolower(Sys.info()[[1]]) != "linux", 225, 224).
  1/1 mismatches
  [1] 224 - 225 == -1
  
  -- 2. Failure: test the haze (@testall.R#23)  ----------------------------------
  floor(h$A0 * 1000) not equal to ifelse(tolower(Sys.info()[[1]]) != "linux", 710, 712).
  1/1 mismatches
  [1] 712 - 710 == 2
  
  == testthat results  ===========================================================
  [ OK: 4 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 2 ]
  1. Failure: test the haze (@testall.R#22) 
  2. Failure: test the haze (@testall.R#23) 
  
  Error: testthat unit tests failed
  Execution halted
extract_hazus_functions: no visible global function definition for
  'data'
Undefined global functions or variables:
  data
Consider adding
  importFrom("utils", "data")
to your NAMESPACE file.
GNU make is a SystemRequirements.
detect.movement: no visible global function definition for 't.test'
generate.random.conf: no visible global function definition for 'rnorm'
Undefined global functions or variables:
  rnorm t.test
Consider adding
  importFrom("stats", "rnorm", "t.test")
to your NAMESPACE file.
Malformed Title field: should not end in a period.
PoincarePlot: no visible global function definition for 'lines'
PoincarePlot: no visible global function definition for 'lowess'
hctest: no visible global function definition for 'cor.test'
rdplot: no visible global function definition for 'lines'
rdplot: no visible global function definition for 'lowess'
rdplot: no visible global function definition for 'rgb'
simer: no visible global function definition for 'runif'
simer: no visible global function definition for 'rnorm'
Undefined global functions or variables:
  cor.test lines lowess rgb rnorm runif
Consider adding
  importFrom("grDevices", "rgb")
  importFrom("graphics", "lines")
  importFrom("stats", "cor.test", "lowess", "rnorm", "runif")
to your NAMESPACE file.
installed size is  5.5Mb
  sub-directories of 1Mb or more:
    doc           2.7Mb
    htmlwidgets   2.8Mb
Running examples in 'hchinamap-Ex.R' failed
The error most likely occurred in:

> ### Name: hchinamap
> ### Title: 'hchinamap': Mapping China and Its Provinces, Municipalities and
> ###   Autonomous Regions using R and 'Highmaps'
> ### Aliases: hchinamap
> 
> ### ** Examples
> 
> library(hchinamap)
> library(dplyr)
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Error(s) in re-building vignettes:
--- re-building 'hchinamap.Rmd' using rmarkdown
trying URL 'https://czxb.github.io/br/chinadf.rda'
Content type 'application/octet-stream' length 3992 bytes
==================================================
downloaded 3992 bytes

Quitting from lines 50-58 (hchinamap.Rmd) 
Error: processing vignette 'hchinamap.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'hchinamap.Rmd'

SUMMARY: processing the following file failed:
  'hchinamap.Rmd'

Error: Vignette re-building failed.
Execution halted
installed size is  5.9Mb
  sub-directories of 1Mb or more:
    data   5.6Mb
installed size is 10.1Mb
  sub-directories of 1Mb or more:
    data  10.0Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/hddtools.Rcheck/00install.out' for details.
installed size is 11.3Mb
  sub-directories of 1Mb or more:
    libs   6.7Mb
Promax.only: no visible global function definition for 'lm.fit'
factor.pa.ginv: no visible binding for global variable 'median'
factor.pa.ginv: no visible global function definition for 'cor'
factor.pa.ginv: no visible global function definition for 'varimax'
factor.pa.ginv: no visible global function definition for 'pchisq'
pairwise.mahalanobis: no visible global function definition for 'cor'
pairwise.mahalanobis: no visible global function definition for
  'mahalanobis'
Undefined global functions or variables:
  cor lm.fit mahalanobis median pchisq varimax
Consider adding
  importFrom("stats", "cor", "lm.fit", "mahalanobis", "median", "pchisq",
             "varimax")
to your NAMESPACE file.
Error(s) in re-building vignettes:
--- re-building 'hdme.Rmd' using rmarkdown
Loading required package: Matrix
Loaded glmnet 4.0-2
Quitting from lines 137-150 (hdme.Rmd) 
Error: processing vignette 'hdme.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'hdme.Rmd'

SUMMARY: processing the following file failed:
  'hdme.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/HDMT.Rcheck/00install.out' for details.
coef.HDtweedie: no visible global function definition for 'rbind2'
coef.cv.HDtweedie: no visible global function definition for 'coef'
cv.tweediegrppath: no visible global function definition for 'predict'
cv.tweediegrppath: no visible binding for global variable
  'weighted.mean'
cvcompute: no visible binding for global variable 'weighted.mean'
error.bars: no visible global function definition for 'segments'
lambda.interp: no visible global function definition for 'approx'
plot.HDtweedie: no visible global function definition for 'par'
plot.HDtweedie: no visible binding for global variable 'plot.default'
plot.HDtweedie: no visible global function definition for 'gray.colors'
plot.HDtweedie: no visible global function definition for 'abline'
plot.cv.HDtweedie: no visible global function definition for 'points'
plot.cv.HDtweedie: no visible global function definition for 'axis'
plot.cv.HDtweedie: no visible global function definition for 'abline'
predict.HDtweedie: no visible global function definition for 'rbind2'
predict.HDtweedie: no visible global function definition for 'cbind2'
predict.cv.HDtweedie: no visible global function definition for
  'predict'
Undefined global functions or variables:
  abline approx axis cbind2 coef gray.colors par plot.default points
  predict rbind2 segments weighted.mean
Consider adding
  importFrom("grDevices", "gray.colors")
  importFrom("graphics", "abline", "axis", "par", "plot.default",
             "points", "segments")
  importFrom("methods", "cbind2", "rbind2")
  importFrom("stats", "approx", "coef", "predict", "weighted.mean")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/healthcareai.Rcheck/00install.out' for details.
Malformed Title field: should not end in a period.
installed size is  5.3Mb
  sub-directories of 1Mb or more:
    doc   5.0Mb
Malformed Title field: should not end in a period.
heatmap.plus: no visible binding for global variable 'dist'
heatmap.plus: no visible binding for global variable 'hclust'
heatmap.plus : <anonymous>: no visible global function definition for
  'reorder'
heatmap.plus: no visible global function definition for 'as.dendrogram'
heatmap.plus: no visible global function definition for
  'order.dendrogram'
heatmap.plus: no visible binding for global variable 'sd'
heatmap.plus: no visible global function definition for 'par'
heatmap.plus: no visible global function definition for 'layout'
heatmap.plus: no visible global function definition for 'image'
heatmap.plus: no visible global function definition for 'axis'
heatmap.plus: no visible global function definition for 'mtext'
heatmap.plus: no visible global function definition for 'frame'
heatmap.plus: no visible global function definition for 'title'
Undefined global functions or variables:
  as.dendrogram axis dist frame hclust image layout mtext
  order.dendrogram par reorder sd title
Consider adding
  importFrom("graphics", "axis", "frame", "image", "layout", "mtext",
             "par", "title")
  importFrom("stats", "as.dendrogram", "dist", "hclust",
             "order.dendrogram", "reorder", "sd")
to your NAMESPACE file.
prepare_Rd: heatmap.plus.package.Rd:69: Dropping empty section \details
prepare_Rd: heatmap.plus.package.Rd:70: Dropping empty section \value
prepare_Rd: heatmap.plus.package.Rd:73: Dropping empty section \note
prepare_Rd: heatmap.plus.package.Rd:71: Dropping empty section \references
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/heatwaveR.Rcheck/00install.out' for details.
Running examples in 'heddlr-Ex.R' failed
The error most likely occurred in:

> ### Name: make_template
> ### Title: Linearly combine template elements into templates
> ### Aliases: make_template
> 
> ### ** Examples
> 
> 
> # When passed vectors, make_template flattens each vector into a single
> # string and then combines its arguments from left to right
> spList <- data.frame(Species = c(unique(iris$Species), "test string"))
> make_template(
+   heddle(spList, "SPECIES CODE GWAR ", "GWAR" = Species),
+   heddle(spList, "SPECIES CODE GWAR ", "GWAR" = Species)
+ )
[1] "SPECIES CODE 1 SPECIES CODE 2 SPECIES CODE 3 SPECIES CODE test string SPECIES CODE 1 SPECIES CODE 2 SPECIES CODE 3 SPECIES CODE test string "
> 
> # When passed variables in a dataframe, make_template collapses each column
> # in turn, then combines the output strings from left to right
> spList <- data.frame(Species = c(unique(iris$Species), "test string"))
> spList$template <- heddle(spList, "SPECIES CODE GWAR ", "GWAR" = Species)
> make_template(spList, template)
[1] "SPECIES CODE 1 SPECIES CODE 2 SPECIES CODE 3 SPECIES CODE test string "
> make_template(spList, template, template)
[1] "SPECIES CODE 1 SPECIES CODE 2 SPECIES CODE 3 SPECIES CODE test string SPECIES CODE 1 SPECIES CODE 2 SPECIES CODE 3 SPECIES CODE test string "
> 
> # When passed nested columns, heddlr collapses each cell into a string,
> # then collapses each column into a string, and then combines the outputs
> # from left to right
> make_template(tidyr::nest(spList, nested = template), nested)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: make_template ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Running 'testthat.R' [2s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(heddlr)
  > 
  > test_check("heddlr")
  test-- 1. Error: make_template handles dataframes correctly (@test-make_template.R#3
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. testthat::expect_match(...)
    5. tidyr::nest
    6. base::getExportedValue(pkg, name)
    7. base::asNamespace(ns)
    8. base::getNamespace(ns)
    9. base::loadNamespace(name)
   12. base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
   13. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 95 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: make_template handles dataframes correctly (@test-make_template.R#37) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'modular-reporting-with-heddlr.Rmd' using rmarkdown
Quitting from lines 188-191 (modular-reporting-with-heddlr.Rmd) 
Error: processing vignette 'modular-reporting-with-heddlr.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'modular-reporting-with-heddlr.Rmd'

SUMMARY: processing the following file failed:
  'modular-reporting-with-heddlr.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/heemod.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/helda.Rcheck/00install.out' for details.
Package suggested but not available for checking: 'FRB'
Package suggested but not available for checking: 'glmmADMB'
installed size is  7.7Mb
  sub-directories of 1Mb or more:
    doc    1.8Mb
    libs   4.5Mb
Running examples in 'hesim-Ex.R' failed
The error most likely occurred in:

> ### Name: IndivCtstm
> ### Title: Individual-level continuous time state transition model
> ### Aliases: IndivCtstm
> 
> ### ** Examples
> 
> library("flexsurv")
Loading required package: survival
Error: package or namespace load failed for 'flexsurv' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Error(s) in re-building vignettes:
--- re-building 'expected-values.Rmd' using rmarkdown
--- finished re-building 'expected-values.Rmd'

--- re-building 'getting-started.Rmd' using rmarkdown
--- finished re-building 'getting-started.Rmd'

--- re-building 'icea.Rmd' using rmarkdown
--- finished re-building 'icea.Rmd'

--- re-building 'intro.Rmd' using rmarkdown
Loading required package: survival
Quitting from lines 112-122 (intro.Rmd) 
Error: processing vignette 'intro.Rmd' failed with diagnostics:
package or namespace load failed for 'flexsurv' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'intro.Rmd'

--- re-building 'markov-inhomogeneous.Rmd' using rmarkdown
--- finished re-building 'markov-inhomogeneous.Rmd'

--- re-building 'mlogit.Rmd' using rmarkdown
--- finished re-building 'mlogit.Rmd'

--- re-building 'mstate.Rmd' using rmarkdown
Loading required package: survival
Quitting from lines 84-94 (mstate.Rmd) 
Error: processing vignette 'mstate.Rmd' failed with diagnostics:
package or namespace load failed for 'flexsurv' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'mstate.Rmd'

--- re-building 'psm.Rmd' using rmarkdown
Loading required package: survival
Quitting from lines 81-96 (psm.Rmd) 
Error: processing vignette 'psm.Rmd' failed with diagnostics:
package or namespace load failed for 'flexsurv' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'psm.Rmd'

SUMMARY: processing the following files failed:
  'intro.Rmd' 'mstate.Rmd' 'psm.Rmd'

Error: Vignette re-building failed.
Execution halted
Warning: no function found corresponding to methods exports from 'het.test' for: 'show'

A namespace must be able to be loaded with just the base namespace
loaded: otherwise if the namespace gets loaded by a saved object, the
session will be unable to start.

Probably some imports need to be declared in the NAMESPACE file.
Packages in Depends field not imported from:
  'methods' 'vars'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
whites.htest: no visible global function definition for 'residuals'
whites.htest: no visible global function definition for 'lm'
whites.htest: no visible global function definition for 'pchisq'
whites.htest: no visible global function definition for 'new'
Undefined global functions or variables:
  lm new pchisq residuals
Consider adding
  importFrom("methods", "new")
  importFrom("stats", "lm", "pchisq", "residuals")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Running 'testthat.R' [45s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(hettx)
  > 
  > test_check("hettx")
  -- 1. Error: Clever dot notation for formula works (@test_estimate_systematic.R#
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. dplyr::select
   2. base::getExportedValue(pkg, name)
   3. base::asNamespace(ns)
   4. base::getNamespace(ns)
   5. base::loadNamespace(name)
   6. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 28 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: Clever dot notation for formula works (@test_estimate_systematic.R#80) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'detect_idiosyncratic_vignette.Rmd' using rmarkdown
Quitting from lines 35-39 (detect_idiosyncratic_vignette.Rmd) 
Error: processing vignette 'detect_idiosyncratic_vignette.Rmd' failed with diagnostics:
package or namespace load failed for 'tidyverse' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'detect_idiosyncratic_vignette.Rmd'

--- re-building 'estimate_systematic_vignette.Rmd' using rmarkdown
--- finished re-building 'estimate_systematic_vignette.Rmd'

SUMMARY: processing the following file failed:
  'detect_idiosyncratic_vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/heuristicsmineR.Rcheck/00install.out' for details.
Package vignette with placeholder title 'Vignette Title':
  'hexbin-classes.Rmd'
HubNetwork: no visible global function definition for 'rbinom'
HubNetwork: no visible global function definition for 'runif'
HubNetwork: no visible global function definition for 'cov2cor'
binaryMCMC: no visible global function definition for 'rbinom'
image.hbn: no visible global function definition for 'col2rgb'
image.hbn: no visible global function definition for 'rgb'
image.hbn: no visible global function definition for 'dev.new'
image.hbn: no visible global function definition for 'par'
image.hbn: no visible global function definition for 'image'
image.hcov: no visible global function definition for 'col2rgb'
image.hcov: no visible global function definition for 'rgb'
image.hcov: no visible global function definition for 'dev.new'
image.hcov: no visible global function definition for 'par'
image.hcov: no visible global function definition for 'image'
image.hglasso: no visible global function definition for 'col2rgb'
image.hglasso: no visible global function definition for 'rgb'
image.hglasso: no visible global function definition for 'dev.new'
image.hglasso: no visible global function definition for 'par'
image.hglasso: no visible global function definition for 'image'
plot.hbn: no visible global function definition for 'rgb'
plot.hcov: no visible global function definition for 'rgb'
plot.hglasso: no visible global function definition for 'rgb'
Undefined global functions or variables:
  col2rgb cov2cor dev.new image par rbinom rgb runif
Consider adding
  importFrom("grDevices", "col2rgb", "dev.new", "rgb")
  importFrom("graphics", "image", "par")
  importFrom("stats", "cov2cor", "rbinom", "runif")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/hgutils.Rcheck/00install.out' for details.
Package vignette with placeholder title 'Vignette Title':
  'HHG.Rmd'
':::' call which should be '::': 'ggplot2:::guide_axis'
  See the note in ?`:::` about the use of this operator.
Unexported objects imported by ':::' calls:
  'ggplot2:::build_guides' 'ggplot2:::scales_list'
  See the note in ?`:::` about the use of this operator.
banded: no visible global function definition for 'toeplitz'
gpband: no visible global function definition for 'toeplitz'
hierband.cv: no visible global function definition for 'cov'
hierband.cv: no visible binding for global variable 'sd'
subdiag.thresh: no visible global function definition for 'uniroot'
subdiag.thresh: no visible global function definition for 'toeplitz'
Undefined global functions or variables:
  cov sd toeplitz uniroot
Consider adding
  importFrom("stats", "cov", "sd", "toeplitz", "uniroot")
to your NAMESPACE file.
booties: no visible binding for global variable 'sd'
booties: no visible binding for global variable 'quantile'
hierDiversity: no visible global function definition for
  'txtProgressBar'
hierDiversity: no visible global function definition for
  'setTxtProgressBar'
Undefined global functions or variables:
  quantile sd setTxtProgressBar txtProgressBar
Consider adding
  importFrom("stats", "quantile", "sd")
  importFrom("utils", "setTxtProgressBar", "txtProgressBar")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/HierDpart.Rcheck/00install.out' for details.
Error(s) in re-building vignettes:
--- re-building 'hierfstat.Rmd' using rmarkdown
Loading required package: ade4
Quitting from lines 21-23 (hierfstat.Rmd) 
Error: processing vignette 'hierfstat.Rmd' failed with diagnostics:
package or namespace load failed for 'adegenet' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'hierfstat.Rmd'

--- re-building 'import.Rmd' using rmarkdown
Read 4 items
Read 5 items
Read 264 items
Loading required package: ade4
Quitting from lines 76-86 (import.Rmd) 
Error: processing vignette 'import.Rmd' failed with diagnostics:
package or namespace load failed for 'adegenet' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'import.Rmd'

SUMMARY: processing the following files failed:
  'hierfstat.Rmd' 'import.Rmd'

Error: Vignette re-building failed.
Execution halted
Package suggested but not available for checking: 'XMLRPC'
calcPower: no visible global function definition for 'pchisq'
calcPower: no visible global function definition for 'qchisq'
delta2 : K1: no visible global function definition for 'qnorm'
delta2: no visible global function definition for 'qnorm'
delta2: no visible global function definition for 'pnorm'
delta2: no visible global function definition for 'dnorm'
Undefined global functions or variables:
  dnorm pchisq pnorm qchisq qnorm
Consider adding
  importFrom("stats", "dnorm", "pchisq", "pnorm", "qchisq", "qnorm")
to your NAMESPACE file.
compute.contrasts: no visible binding for global variable 'sd'
compute.contrasts: no visible global function definition for 'cor'
compute.contrasts: no visible global function definition for 'sd'
plot.hiertest: no visible global function definition for 'legend'
Undefined global functions or variables:
  cor legend sd
Consider adding
  importFrom("graphics", "legend")
  importFrom("stats", "cor", "sd")
to your NAMESPACE file.
'library' or 'require' calls to packages already attached by Depends:
  'nnet' 'stats'
  Please remove these calls from your code.
Package in Depends field not imported from: 'nnet'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/highcharter.Rcheck/00install.out' for details.
CLX.sim.Covtest: no visible global function definition for 'cov'
CLX.sim.equalcov: no visible global function definition for 'cov'
CLX.sim.unequalcov: no visible global function definition for 'cov'
CLX.test.equalcov: no visible global function definition for 'cov'
CLX.test.unequalcov: no visible global function definition for 'cov'
ChenQin.sim: no visible global function definition for 'pnorm'
ChenQin.test: no visible global function definition for 'pnorm'
GCT.sim: no visible binding for global variable 'var'
GCT.sim: no visible global function definition for 'acf'
GCT.sim: no visible global function definition for 'pnorm'
GCT.test: no visible binding for global variable 'var'
GCT.test: no visible global function definition for 'acf'
GCT.test: no visible global function definition for 'pnorm'
GCT.test.missing: no visible binding for global variable 'var'
GCT.test.missing: no visible global function definition for 'acf'
GCT.test.missing: no visible global function definition for 'pnorm'
SK.sim: no visible global function definition for 'cov'
SK.sim: no visible global function definition for 'pnorm'
SK.test: no visible global function definition for 'cov'
SK.test: no visible global function definition for 'pnorm'
build2popData : <anonymous>: no visible global function definition for
  'rnorm'
build2popData: no visible global function definition for 'arima.sim'
build2popData_muYafunction : <anonymous>: no visible global function
  definition for 'rnorm'
build2popData_muYafunction: no visible global function definition for
  'arima.sim'
innovate: no visible binding for global variable 'rnorm'
rdblepareto: no visible global function definition for 'runif'
rgammashift: no visible global function definition for 'rgamma'
Undefined global functions or variables:
  acf arima.sim cov pnorm rgamma rnorm runif var
Consider adding
  importFrom("stats", "acf", "arima.sim", "cov", "pnorm", "rgamma",
             "rnorm", "runif", "var")
to your NAMESPACE file.
Func.ABOD: no visible global function definition for 'combn'
Func.ABOD: no visible global function definition for 'var'
Func.SOD: no visible global function definition for 'var'
Func.trans : erf: no visible global function definition for 'pnorm'
Func.trans: no visible global function definition for 'sd'
Undefined global functions or variables:
  combn pnorm sd var
Consider adding
  importFrom("stats", "pnorm", "sd", "var")
  importFrom("utils", "combn")
to your NAMESPACE file.
installed size is  8.6Mb
  sub-directories of 1Mb or more:
    data   5.9Mb
    libs   2.1Mb
Running examples in 'highlightHTML-Ex.R' failed
The error most likely occurred in:

> ### Name: table_id_inject
> ### Title: Table hash addition for markup
> ### Aliases: table_id_inject
> 
> ### ** Examples
> 
> library(dplyr)
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Running 'testthat.R' [2s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(highlightHTML)
  > 
  > test_check("highlightHTML")
  -- 1. Error: add in tags to table (@test_table_id.r#4)  ------------------------
  package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::library(dplyr)
   2. base::tryCatch(...)
   3. base:::tryCatchList(expr, classes, parentenv, handlers)
   4. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   5. value[[3L]](cond)
  
  == testthat results  ===========================================================
  [ OK: 9 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: add in tags to table (@test_table_id.r#4) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'the_basics.Rmd' using rmarkdown
Quitting from lines 118-132 (the_basics.Rmd) 
Error: processing vignette 'the_basics.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'the_basics.Rmd'

SUMMARY: processing the following file failed:
  'the_basics.Rmd'

Error: Vignette re-building failed.
Execution halted
BenjaminiHochberg: no visible global function definition for 'p.adjust'
CaoKosorok : CKfunc: no visible global function definition for 'pnorm'
CaoKosorok : <anonymous>: no visible global function definition for
  'pnorm'
StoreyTibshirani: no visible global function definition for
  'smooth.spline'
plotI_Lines: no visible global function definition for 'par'
plotI_Lines: no visible global function definition for 'lines'
plotI_Lines: no visible global function definition for 'legend'
plotI_Points: no visible global function definition for 'points'
plotI_Points: no visible global function definition for 'legend'
tStatistic : <anonymous>: no visible global function definition for
  't.test'
venn2: no visible global function definition for 'plot.new'
venn3: no visible global function definition for 'plot.new'
Undefined global functions or variables:
  legend lines p.adjust par plot.new pnorm points smooth.spline t.test
Consider adding
  importFrom("graphics", "legend", "lines", "par", "plot.new", "points")
  importFrom("stats", "p.adjust", "pnorm", "smooth.spline", "t.test")
to your NAMESPACE file.
Error(s) in re-building vignettes:
--- re-building 'comparing_samples.Rmd' using rmarkdown
Quitting from lines 78-86 (comparing_samples.Rmd) 
Error: processing vignette 'comparing_samples.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'comparing_samples.Rmd'

--- re-building 'identifying_effects.Rmd' using rmarkdown
Warning in make.cut(fullMat, n = nbins + 1, count.lim = 40) :
  n is much larger than the suggested number of cuts: 2 see ?hilbert.order
Quitting from lines 131-151 (identifying_effects.Rmd) 
Error: processing vignette 'identifying_effects.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'identifying_effects.Rmd'

SUMMARY: processing the following files failed:
  'comparing_samples.Rmd' 'identifying_effects.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/hildareadR.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/hilldiv.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
occupancy: no visible global function definition for 'quantile'
Undefined global functions or variables:
  quantile
Consider adding
  importFrom("stats", "quantile")
to your NAMESPACE file.
data_simu: no visible global function definition for 'runif'
data_simu: no visible global function definition for 'rbinom'
data_simu: no visible global function definition for 'rnorm'
Undefined global functions or variables:
  rbinom rnorm runif
Consider adding
  importFrom("stats", "rbinom", "rnorm", "runif")
to your NAMESPACE file.
overlay.sim: no visible global function definition for 'points'
plotDistr: no visible global function definition for 'dev.hold'
plotDistr: no visible global function definition for 'dev.flush'
plotDistr: no visible global function definition for 'segments'
Undefined global functions or variables:
  dev.flush dev.hold points segments
Consider adding
  importFrom("grDevices", "dev.flush", "dev.hold")
  importFrom("graphics", "points", "segments")
to your NAMESPACE file.
'library' or 'require' call to 'rgl' which was already attached by Depends.
  Please remove these calls from your code.
PlotOptPower: no visible global function definition for 'bmp'
PlotOptPower: no visible global function definition for
  'filled.contour'
PlotOptPower: no visible global function definition for 'title'
PlotOptPower: no visible global function definition for 'grey.colors'
PlotOptPower: no visible global function definition for 'axis'
PlotOptPower: no visible global function definition for 'polygon'
PlotOptPower: no visible global function definition for 'legend'
PlotOptPower: no visible global function definition for 'mtext'
PlotOptPower: no visible global function definition for 'dev.off'
PlotOptPower: no visible global function definition for
  'terrain.colors'
ShowOptDesign: no visible global function definition for 'head'
diffVariantError: no visible global function definition for 'pbinom'
predictPoolNCP: no visible global function definition for 'data'
probDetEqual3: no visible global function definition for 'dbinom'
probDetEqual3: no visible global function definition for 'pbinom'
Undefined global functions or variables:
  axis bmp data dbinom dev.off filled.contour grey.colors head legend
  mtext pbinom polygon terrain.colors title
Consider adding
  importFrom("grDevices", "bmp", "dev.off", "grey.colors",
             "terrain.colors")
  importFrom("graphics", "axis", "filled.contour", "legend", "mtext",
             "polygon", "title")
  importFrom("stats", "dbinom", "pbinom")
  importFrom("utils", "data", "head")
to your NAMESPACE file.
Running examples in 'hipread-Ex.R' failed
The error most likely occurred in:

> ### Name: hipread_long_chunked
> ### Title: Read a hierarchical fixed width data file, in chunks
> ### Aliases: hipread_long_chunked hipread_list_chunked
> 
> ### ** Examples
> 
> # Read in a data, filtering out hhnum == "002"
> data <- hipread_long_chunked(
+   hipread_example("test-basic.dat"),
+   HipDataFrameCallback$new(function(x, pos) x[x$hhnum != 2, ]),
+   4,
+   list(
+     H = hip_fwf_positions(
+       c(1, 2, 5, 8),
+       c(1, 4, 7, 10),
+       c("rt", "hhnum", "hh_char", "hh_dbl"),
+       c("c", "i", "c", "d")
+     ),
+     P = hip_fwf_widths(
+       c(1, 3, 1, 3, 1),
+       c("rt", "hhnum",  "pernum", "per_dbl", "per_mix"),
+       c("c", "i", "i", "d", "c")
+     )
+   ),
+   hip_rt(1, 1)
+ )
Error in .subset2(public_bind_env, "initialize")(...) : 
  `HipDataFrameCallback`` requires package 'dplyr'. Install using command `install.packages('dplyr')`.
Calls: hipread_long_chunked -> as_chunk_callback -> <Anonymous> -> <Anonymous>
Execution halted
Running 'testthat.R' [4s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(hipread)
  > 
  > test_check("hipread")
  -- 1. Error: trailing line breaks & windows line breaks don't cause trouble (@te
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. dplyr::tibble
   2. base::getExportedValue(pkg, name)
   3. base::asNamespace(ns)
   4. base::getNamespace(ns)
   5. base::loadNamespace(name)
   6. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 73 | SKIPPED: 6 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: trailing line breaks & windows line breaks don't cause trouble (@test-line-edge-cases.R#15) 
  
  Error: testthat unit tests failed
  Execution halted
arms: no visible global function definition for 'rnorm'
rballunif: no visible global function definition for 'rnorm'
rballunif: no visible global function definition for 'runif'
Undefined global functions or variables:
  rnorm runif
Consider adding
  importFrom("stats", "rnorm", "runif")
to your NAMESPACE file.
installed size is  5.0Mb
  sub-directories of 1Mb or more:
    doc       1.8Mb
    extdata   1.2Mb
Malformed Description field: should contain one or more complete sentences.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/hJAM.Rcheck/00install.out' for details.
Package suggested but not available for checking: 'FGN'
installed size is  6.1Mb
  sub-directories of 1Mb or more:
    data   3.5Mb
    libs   2.4Mb
Running examples in 'hmclearn-Ex.R' failed
The error most likely occurred in:

> ### Name: hmclearn-plots
> ### Title: Plotting for MCMC visualization and diagnostics provided by
> ###   'bayesplot' package
> ### Aliases: hmclearn-plots mcmc_intervals mcmc_intervals.hmclearn
> ###   mcmc_areas mcmc_areas.hmclearn mcmc_hist mcmc_hist.hmclearn
> ###   mcmc_hist_by_chain mcmc_hist_by_chain.hmclearn mcmc_dens
> ###   mcmc_dens.hmclearn mcmc_scatter mcmc_scatter.hmclearn mcmc_hex
> ###   mcmc_hex.hmclearn mcmc_pairs mcmc_pairs.hmclearn mcmc_acf
> ###   mcmc_acf.hmclearn mcmc_acf_bar mcmc_acf_bar.hmclearn mcmc_trace
> ###   mcmc_trace.hmclearn mcmc_rhat mcmc_rhat.hmclearn mcmc_rhat_hist
> ###   mcmc_rhat_hist.hmclearn mcmc_neff mcmc_neff.hmclearn mcmc_neff_hist
> ###   mcmc_neff_hist.hmclearn mcmc_neff_data mcmc_neff_data.hmclearn
> ###   mcmc_violin mcmc_violin.hmclearn
> 
> ### ** Examples
> 
> # poisson regression example
> set.seed(7363)
> X <- cbind(1, matrix(rnorm(40), ncol=2))
> betavals <- c(0.8, -0.5, 1.1)
> lmu <- X %*% betavals
> y <- sapply(exp(lmu), FUN = rpois, n=1)
> 
> f <- hmc(N = 1000,
+           theta.init = rep(0, 3),
+           epsilon = c(0.03, 0.02, 0.015),
+           L = 10,
+           logPOSTERIOR = poisson_posterior,
+           glogPOSTERIOR = g_poisson_posterior,
+           varnames = paste0("beta", 0:2),
+           param = list(y=y, X=X),
+           parallel=FALSE, chains=2)
> 
> mcmc_trace(f, burnin=100)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: mcmc_trace ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/hmi.Rcheck/00install.out' for details.
propsPO: multiple local function definitions for 'g' with different
  formal arguments
Running examples in 'Hmisc-Ex.R' failed
The error most likely occurred in:

> ### Name: combplotp
> ### Title: Combination Plot
> ### Aliases: combplotp
> 
> ### ** Examples
> 
> g <- function() sample(0:1, n, prob=c(1 - p, p), replace=TRUE)
> set.seed(2); n <- 100; p <- 0.5
> x1 <- g(); label(x1) <- 'A long label for x1 that describes it'
> x2 <- g()
> x3 <- g(); label(x3) <- 'This is<br>a label for x3'
> x4 <- g()
> combplotp(~ x1 + x2 + x3 + x4, showno=TRUE, includenone=TRUE)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: combplotp ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
baumwelchcont: no visible global function definition for 'dnorm'
hmmcontSimul: no visible global function definition for 'rnorm'
hmmcontSimul: no visible global function definition for 'rbinom'
plot.ContObservHMM: no visible global function definition for 'lines'
statesDistributionsPlot: no visible global function definition for
  'dnorm'
statesDistributionsPlot: no visible global function definition for 'sd'
statesDistributionsPlot: no visible global function definition for
  'lines'
statesDistributionsPlot: no visible global function definition for
  'legend'
summary.ContObservHMM: no visible global function definition for 'sd'
Undefined global functions or variables:
  dnorm legend lines rbinom rnorm sd
Consider adding
  importFrom("graphics", "legend", "lines")
  importFrom("stats", "dnorm", "rbinom", "rnorm", "sd")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
dishonestCasino: no visible global function definition for 'axis'
dishonestCasino: no visible global function definition for 'text'
dishonestCasino: no visible global function definition for 'rect'
dishonestCasino: no visible global function definition for 'rgb'
dishonestCasino: no visible global function definition for 'points'
Undefined global functions or variables:
  axis points rect rgb text
Consider adding
  importFrom("grDevices", "rgb")
  importFrom("graphics", "axis", "points", "rect", "text")
to your NAMESPACE file.
Package suggested but not available for checking: 'glmmADMB'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/holodeck.Rcheck/00install.out' for details.
Running examples in 'homologene-Ex.R' failed
The error most likely occurred in:

> ### Name: homologene
> ### Title: Get homologues of given genes
> ### Aliases: homologene
> 
> ### ** Examples
> 
> homologene(c('Eno2','17441'), inTax = 10090, outTax = 9606)
Error in inDL(x, as.logical(local), as.logical(now), ...) : 
  unable to load shared object 'D:/temp/RtmpMb5dG1/RLIBS_975057355f50/dplyr/libs/x64/dplyr.dll':
  LoadLibrary failure:  Das angegebene Modul wurde nicht gefunden.
Calls: homologene ... getNamespace -> loadNamespace -> library.dynam -> dyn.load -> inDL
Execution halted
hornpa: no visible global function definition for 'rnorm'
hornpa: no visible global function definition for 'cor'
hornpa: no visible global function definition for 'quantile'
Undefined global functions or variables:
  cor quantile rnorm
Consider adding
  importFrom("stats", "cor", "quantile", "rnorm")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/hot.deck.Rcheck/00install.out' for details.
GNU make is a SystemRequirements.
Malformed Description field: should contain one or more complete sentences.
hpbayes.plot: no visible global function definition for 'par'
hpbayes.plot: no visible global function definition for 'points'
postpri.plot: no visible global function definition for 'par'
postpri.plot: no visible global function definition for 'points'
postpri.plot: no visible global function definition for 'segments'
postpri.plot: no visible global function definition for 'boxplot'
Undefined global functions or variables:
  boxplot par points segments
Consider adding
  importFrom("graphics", "boxplot", "par", "points", "segments")
to your NAMESPACE file.
ApproxC: no visible global function definition for 'convolve'
DMC: no visible global function definition for 'median'
DMC: no visible global function definition for 'ecdf'
ToSWF: no visible global function definition for 'write.table'
Undefined global functions or variables:
  convolve ecdf median write.table
Consider adding
  importFrom("stats", "convolve", "ecdf", "median")
  importFrom("utils", "write.table")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/hpiR.Rcheck/00install.out' for details.
bracket: no visible global function definition for 'segments'
Undefined global functions or variables:
  segments
Consider adding
  importFrom("graphics", "segments")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/HRM.Rcheck/00install.out' for details.
installed size is  9.3Mb
  sub-directories of 1Mb or more:
    data   8.8Mb
Error(s) in re-building vignettes:
--- re-building 'PropertiesAthens.Rmd' using knitr
Linking to GEOS 3.8.0, GDAL 3.0.4, PROJ 6.3.1
Quitting from lines 15-19 (PropertiesAthens.Rmd) 
Error: processing vignette 'PropertiesAthens.Rmd' failed with diagnostics:
package or namespace load failed for 'tidyverse' in inDL(x, as.logical(local), as.logical(now), ...):
 unable to load shared object 'D:/temp/RtmpeazNcD/RLIBS_2edf060ca6545/dplyr/libs/x64/dplyr.dll':
  LoadLibrary failure:  Das angegebene Modul wurde nicht gefunden.

--- failed re-building 'PropertiesAthens.Rmd'

--- re-building 'hsar.Rmd' using knitr
Checking rgeos availability: TRUE
rgdal: version: 1.5-16, (SVN revision 1050)
Geospatial Data Abstraction Library extensions to R successfully loaded
Loaded GDAL runtime: GDAL 3.0.4, released 2020/01/28
Path to GDAL shared files: D:/temp/RtmpeazNcD/RLIBS_2edf060ca6545/rgdal/gdal
GDAL binary built with GEOS: TRUE 
Loaded PROJ runtime: Rel. 6.3.1, February 10th, 2020, [PJ_VERSION: 631]
Path to PROJ shared files: D:/temp/RtmpeazNcD/RLIBS_2edf060ca6545/rgdal/proj
Linking to sp version:1.4-2
To mute warnings of possible GDAL/OSR exportToProj4() degradation,
use options("rgdal_show_exportToProj4_warnings"="none") before loading rgdal.
rgeos version: 0.5-3, (SVN revision 634)
 GEOS runtime version: 3.8.0-CAPI-1.13.1 
 Linking to sp version: 1.4-2 
 Polygon checking: TRUE 

Loading required package: spData
To access larger datasets in this package, install the spDataLarge
package with: `install.packages('spDataLarge',
repos='https://nowosad.github.io/drat/', type='source')`
Loading required package: sf
Linking to GEOS 3.8.0, GDAL 3.0.4, PROJ 6.3.1
--- finished re-building 'hsar.Rmd'

SUMMARY: processing the following file failed:
  'PropertiesAthens.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/hsdar.Rcheck/00install.out' for details.
hsicCCA: no visible global function definition for 'median'
hsicCCA: no visible global function definition for 'dist'
hsicCCAfunc: no visible global function definition for 'rnorm'
hsicCCAfunc: no visible global function definition for 'runif'
hsicCCAfunc: no visible global function definition for 'optim'
ktaCCA: no visible global function definition for 'median'
ktaCCA: no visible global function definition for 'dist'
ktaCCAfunc: no visible global function definition for 'rnorm'
ktaCCAfunc: no visible global function definition for 'runif'
ktaCCAfunc: no visible global function definition for 'optim'
Undefined global functions or variables:
  dist median optim rnorm runif
Consider adding
  importFrom("stats", "dist", "median", "optim", "rnorm", "runif")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
Package in Depends field not imported from: 'mvtnorm'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
get.d: no visible global function definition for 'dgeom'
get.d: no visible global function definition for 'dnbinom'
get.d: no visible global function definition for 'dpois'
get.pdf: no visible global function definition for 'dnorm'
get.pdf: no visible global function definition for 'dpois'
get.pdf: no visible global function definition for 'dmvnorm'
hsmm: no visible global function definition for 'uniroot'
hsmm.sim: no visible global function definition for 'rbinom'
hsmm.sim: no visible global function definition for 'rnorm'
hsmm.sim: no visible global function definition for 'rpois'
hsmm.sim: no visible global function definition for 'rmvnorm'
loggeom.update: no visible global function definition for 'plogis'
rmt: no visible global function definition for 'rt'
rmt: no visible global function definition for 'rnorm'
rmt: no visible global function definition for 'rchisq'
rvm: no visible global function definition for 'runif'
Undefined global functions or variables:
  dgeom dmvnorm dnbinom dnorm dpois plogis rbinom rchisq rmvnorm rnorm
  rpois rt runif uniroot
Consider adding
  importFrom("stats", "dgeom", "dnbinom", "dnorm", "dpois", "plogis",
             "rbinom", "rchisq", "rnorm", "rpois", "rt", "runif",
             "uniroot")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/HS.Rcheck/00install.out' for details.
installed size is  8.0Mb
  sub-directories of 1Mb or more:
    libs   7.5Mb
Huber: no visible global function definition for 'quantile'
SSVD.iter.thresh: no visible global function definition for 'mad'
error.est.full: no visible global function definition for 'mad'
error.est.full : <anonymous>: no visible global function definition for
  'median'
low_rank: no visible global function definition for 'median'
low_rank: no visible global function definition for 'mad'
low_rank: no visible global function definition for 'sd'
select.indices: no visible global function definition for 'mad'
select.indices: no visible global function definition for 'median'
select.indices: no visible global function definition for 'pnorm'
select.indices: no visible global function definition for 'p.adjust'
Undefined global functions or variables:
  mad median p.adjust pnorm quantile sd
Consider adding
  importFrom("stats", "mad", "median", "p.adjust", "pnorm", "quantile",
             "sd")
to your NAMESPACE file.
installed size is  6.0Mb
  sub-directories of 1Mb or more:
    libs   6.0Mb
Error(s) in re-building vignettes:
--- re-building 'simu.Rmd' using rmarkdown
Quitting from lines 30-32 (simu.Rmd) 
Error: processing vignette 'simu.Rmd' failed with diagnostics:
package or namespace load failed for 'bayesplot' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'simu.Rmd'

SUMMARY: processing the following file failed:
  'simu.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'htmlTable-Ex.R' failed
The error most likely occurred in:

> ### Name: tidyHtmlTable
> ### Title: Generate an htmlTable using tidy data as input
> ### Aliases: tidyHtmlTable
> 
> ### ** Examples
> 
> library(tibble)
> library(dplyr)
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Running 'testInteractive.R' [1s]
  Running 'testthat.R' [8s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > 
  > test_check('htmlTable')
  Loading required package: htmlTable
  -- 1. Error: (unknown) (@test-tidyHtmlTable.R#2)  ------------------------------
  package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::library(dplyr)
   2. base::tryCatch(...)
   3. base:::tryCatchList(expr, classes, parentenv, handlers)
   4. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   5. value[[3L]](cond)
  
  == testthat results  ===========================================================
  [ OK: 448 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: (unknown) (@test-tidyHtmlTable.R#2) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'complex_tables.Rmd' using rmarkdown
--- finished re-building 'complex_tables.Rmd'

--- re-building 'general.Rmd' using rmarkdown
--- finished re-building 'general.Rmd'

--- re-building 'tidyHtmlTable.Rmd' using rmarkdown
Quitting from lines 29-39 (tidyHtmlTable.Rmd) 
Error: processing vignette 'tidyHtmlTable.Rmd' failed with diagnostics:
package or namespace load failed for 'tidyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'tidyHtmlTable.Rmd'

SUMMARY: processing the following file failed:
  'tidyHtmlTable.Rmd'

Error: Vignette re-building failed.
Execution halted
Error(s) in re-building vignettes:
--- re-building 'htmltab.Rmd' using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
No encoding supplied: defaulting to UTF-8.
Quitting from lines 47-50 (htmltab.Rmd) 
Error: processing vignette 'htmltab.Rmd' failed with diagnostics:
package or namespace load failed for 'tidyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'htmltab.Rmd'

SUMMARY: processing the following file failed:
  'htmltab.Rmd'

Error: Vignette re-building failed.
Execution halted
installed size is  5.1Mb
  sub-directories of 1Mb or more:
    htmlwidgets   1.8Mb
    libs          3.1Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/htmltools.Rcheck/00install.out' for details.
BasicHTML: no visible global function definition for 'png'
BasicHTML: no visible global function definition for 'dev.list'
BasicHTML: no visible global function definition for 'dev.off'
FramedHTML: no visible global function definition for 'graphics.off'
Undefined global functions or variables:
  dev.list dev.off graphics.off png
Consider adding
  importFrom("grDevices", "dev.list", "dev.off", "graphics.off", "png")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/HTSSIP.Rcheck/00install.out' for details.
installed size is 12.0Mb
  sub-directories of 1Mb or more:
    data   8.3Mb
    doc    2.1Mb
Error(s) in re-building vignettes:
--- re-building 'Frank2018.Rmd' using rmarkdown
--- finished re-building 'Frank2018.Rmd'

--- re-building 'Honda2019.Rmd' using rmarkdown
--- finished re-building 'Honda2019.Rmd'

--- re-building 'Linakis2020.Rmd' using rmarkdown
Quitting from lines 37-53 (Linakis2020.Rmd) 
Error: processing vignette 'Linakis2020.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'Linakis2020.Rmd'

--- re-building 'Pearce2017.Rmd' using rmarkdown
--- finished re-building 'Pearce2017.Rmd'

--- re-building 'Ring_2017_vignette01_subpopulations.Rmd' using rmarkdown
--- finished re-building 'Ring_2017_vignette01_subpopulations.Rmd'

--- re-building 'Ring_2017_vignette02_evalmodelsubpop.Rmd' using rmarkdown
--- finished re-building 'Ring_2017_vignette02_evalmodelsubpop.Rmd'

--- re-building 'Ring_2017_vignette03_paper_fig2.Rmd' using rmarkdown
--- finished re-building 'Ring_2017_vignette03_paper_fig2.Rmd'

--- re-building 'Ring_2017_vignette04_paper_fig3.Rmd' using rmarkdown
--- finished re-building 'Ring_2017_vignette04_paper_fig3.Rmd'

--- re-building 'Ring_2017_vignette05b_plothowgatejohnson.Rmd' using rmarkdown
--- finished re-building 'Ring_2017_vignette05b_plothowgatejohnson.Rmd'

--- re-building 'Ring_2017_vignette06_aerplotting.Rmd' using rmarkdown
--- finished re-building 'Ring_2017_vignette06_aerplotting.Rmd'

--- re-building 'Ring_2017_vignette_05a_virtualstudypops.Rmd' using rmarkdown
--- finished re-building 'Ring_2017_vignette_05a_virtualstudypops.Rmd'

--- re-building 'Wambaugh2018.Rmd' using rmarkdown
--- finished re-building 'Wambaugh2018.Rmd'

--- re-building 'Wambaugh2019.Rmd' using rmarkdown
--- finished re-building 'Wambaugh2019.Rmd'

SUMMARY: processing the following file failed:
  'Linakis2020.Rmd'

Error: Vignette re-building failed.
Execution halted
getToHost: no visible global function definition for 'make.socket'
getToHost: no visible global function definition for 'write.socket'
getToHost: no visible global function definition for 'read.socket'
getToHost: no visible global function definition for 'close.socket'
postToHost: no visible global function definition for 'runif'
simplePostToHost: no visible global function definition for
  'make.socket'
simplePostToHost: no visible global function definition for
  'write.socket'
simplePostToHost: no visible global function definition for
  'read.socket'
simplePostToHost: no visible global function definition for
  'close.socket'
Undefined global functions or variables:
  close.socket make.socket read.socket runif write.socket
Consider adding
  importFrom("stats", "runif")
  importFrom("utils", "close.socket", "make.socket", "read.socket",
             "write.socket")
to your NAMESPACE file.
GNU make is a SystemRequirements.
Package in Depends field not imported from: 'testthat'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Error(s) in re-building vignettes:
--- re-building 'humidity-measures.Rmd' using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
--- finished re-building 'humidity-measures.Rmd'

--- re-building 'ivt_ivs-sh.Rmd' using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Quitting from lines 33-45 (ivt_ivs-sh.Rmd) 
Error: processing vignette 'ivt_ivs-sh.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'ivt_ivs-sh.Rmd'

SUMMARY: processing the following file failed:
  'ivt_ivs-sh.Rmd'

Error: Vignette re-building failed.
Execution halted
Calculate3D: no visible global function definition for 'persp'
CalculateHUM_Ex: no visible global function definition for 'combn'
CalculateHUM_Plot: no visible global function definition for 'polygon'
CalculateHUM_Plot: no visible global function definition for 'text'
CalculateHUM_Plot: no visible global function definition for 'points'
CalculateHUM_Plot: no visible global function definition for 'lines'
Undefined global functions or variables:
  combn lines persp points polygon text
Consider adding
  importFrom("graphics", "lines", "persp", "points", "polygon", "text")
  importFrom("utils", "combn")
to your NAMESPACE file.
installed size is  5.5Mb
  sub-directories of 1Mb or more:
    dict   1.5Mb
    libs   3.0Mb
Package suggested but not available for checking: 'hurricaneexposuredata'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/hurricaneexposure.Rcheck/00install.out' for details.
Running 'testthat.R' [11s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(hutils)
  > 
  > test_check("hutils")
  Datei nicht gefunden
  Datei nicht gefunden
  -- 1. Error: data frames (@test_1-3-0_mutate_ntile.R#53)  ----------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. testthat::expect_identical(...)
   4. dplyr::ntile
   5. base::getExportedValue(pkg, name)
   6. base::asNamespace(ns)
   7. base::getNamespace(ns)
   8. base::loadNamespace(name)
   9. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 618 | SKIPPED: 27 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: data frames (@test_1-3-0_mutate_ntile.R#53) 
  
  Error: testthat unit tests failed
  Execution halted
Running examples in 'huxtable-Ex.R' failed
The error most likely occurred in:

> ### Name: by_cases
> ### Title: Map cell contents to properties using 'case_when'
> ### Aliases: by_cases
> 
> ### ** Examples
> 
> if (! requireNamespace("dplyr")) {
+   stop("Please install the 'dplyr' package to run this example")
+ }
Loading required namespace: dplyr
Failed with error:  'DLL 'dplyr' not found: maybe not installed for this architecture?'
Error: Please install the 'dplyr' package to run this example
Execution halted
Error(s) in re-building vignettes:
--- re-building 'design-principles.Rmd' using rmarkdown
--- finished re-building 'design-principles.Rmd'

--- re-building 'huxreg.Rmd' using rmarkdown
Quitting from lines 56-58 (huxreg.Rmd) 
Error: processing vignette 'huxreg.Rmd' failed with diagnostics:
no applicable method for 'tidy' applied to an object of class "lm"
--- failed re-building 'huxreg.Rmd'

--- re-building 'huxtable.Rmd' using rmarkdown
Quitting from lines 21-41 (huxtable.Rmd) 
Error: processing vignette 'huxtable.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'huxtable.Rmd'

--- re-building 'themes.Rhtml' using knitr
--- finished re-building 'themes.Rhtml'

SUMMARY: processing the following files failed:
  'huxreg.Rmd' 'huxtable.Rmd'

Error: Vignette re-building failed.
Execution halted
Malformed Title field: should not end in a period.
HWEImportSamp: no visible global function definition for 'dnorm'
HWEImportSamp: no visible global function definition for 'rnorm'
HWEmodelsMLE: no visible global function definition for 'optim'
HWEsimdat: no visible global function definition for 'rmultinom'
LambdaOptim: no visible global function definition for 'rnorm'
LambdaOptim : LambdaPriorChoice: no visible global function definition
  for 'quantile'
LambdaOptim: no visible global function definition for 'optim'
SinglefPrior: no visible global function definition for 'rnorm'
SinglefReject: no visible global function definition for 'runif'
TriangNormHWE: no visible global function definition for 'pbeta'
Undefined global functions or variables:
  dnorm optim pbeta quantile rmultinom rnorm runif
Consider adding
  importFrom("stats", "dnorm", "optim", "pbeta", "quantile", "rmultinom",
             "rnorm", "runif")
to your NAMESPACE file.
HW.plain: no visible global function definition for 'runif'
Undefined global functions or variables:
  runif
Consider adding
  importFrom("stats", "runif")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
getHwriterVersion: no visible global function definition for
  'sessionInfo'
hmapRowCol: no visible global function definition for 'na.omit'
hwriteImage: no visible global function definition for 'dev.print'
hwriteImage: no visible binding for global variable 'png'
showExample: no visible global function definition for 'browseURL'
Undefined global functions or variables:
  browseURL dev.print na.omit png sessionInfo
Consider adding
  importFrom("grDevices", "dev.print", "png")
  importFrom("stats", "na.omit")
  importFrom("utils", "browseURL", "sessionInfo")
to your NAMESPACE file.
Checking should be performed on sources prepared by 'R CMD build'.
Package in Depends field not imported from: 'coda'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
hybridMC: no visible global function definition for 'txtProgressBar'
hybridMC : pbFun: no visible global function definition for
  'setTxtProgressBar'
hybridMC: no visible global function definition for 'mcmc'
Undefined global functions or variables:
  mcmc setTxtProgressBar txtProgressBar
Consider adding
  importFrom("utils", "setTxtProgressBar", "txtProgressBar")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/HydeNet.Rcheck/00install.out' for details.
ARPIEM2012.Lmom.sample: no visible global function definition for 'var'
ARPIEM2012.freq: no visible binding for global variable 'quantile'
ARPIEM2012.sim.Lmoments : ARPIEM2012.sim.Qind_camp: no visible global
  function definition for 'rnorm'
ARPIEM2012.sim.Lmoments : ARPIEM2012.sim.Qind_reg_moltiplicativo: no
  visible global function definition for 'rnorm'
ARPIEM2012.sim.Lmoments : ARPIEM2012.sim.LCV_camp.LCA_camp: no visible
  global function definition for 'rnorm'
ARPIEM2012.sim.Lmoments : ARPIEM2012.sim.LCV_camp.LCA_reg_additivo: no
  visible global function definition for 'rnorm'
ARPIEM2012.sim.Lmoments :
  ARPIEM2012.sim.LCV_reg_moltiplicativo.LCA_reg_additivo: no visible
  global function definition for 'rnorm'
Undefined global functions or variables:
  quantile rnorm var
Consider adding
  importFrom("stats", "quantile", "rnorm", "var")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/hydrolinks.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
Packages in Depends field not imported from:
  'minpack.lm' 'nlme'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Dstart: no visible global function definition for 'coef'
Dstart: no visible global function definition for 'lm'
SSkosugi: no visible global function definition for 'pnorm'
SSkosugi: no visible global function definition for 'dnorm'
Undefined global functions or variables:
  coef dnorm lm pnorm
Consider adding
  importFrom("stats", "coef", "dnorm", "lm", "pnorm")
to your NAMESPACE file.
Running examples in 'hydrostats-Ex.R' failed
The error most likely occurred in:

> ### Name: flood.length.max
> ### Title: Calculates the maximum flood length in a time series.
> ### Aliases: flood.length.max
> 
> ### ** Examples
> 
> 
> data(Cooper)
> Cooper<-ts.format(Cooper)
> 
> flood.length.max(Cooper, threshold = 50000, ind.days = 5)
  max.duration
1           40
> 
> # Return annual maximum flood length based on calendar year using ddply (from plyr package) 
> require(plyr)
Loading required package: plyr
> Cooper$Year=format(Cooper$Date, format="%Y")
> ddply(Cooper, .(Year), flood.length.max, threshold = 50000)
   Year max.duration
1  1967            0
2  1968           13
3  1969            0
4  1970            0
5  1971           10
6  1972            6
7  1973           17
8  1974           40
9  1975            2
10 1976           21
11 1977           19
12 1978            0
13 1979            8
14 1980            1
15 1981            3
16 1982            0
17 1983           10
18 1984            0
19 1985            0
20 1986            7
21 1987            0
> 
> require(dplyr)
Loading required package: dplyr
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
> Cooper %>%
+ dplyr::group_by(Year) %>%
+ dplyr::do(flood.length.max(., threshold = 50000))
Error in Cooper %>% dplyr::group_by(Year) %>% dplyr::do(flood.length.max(.,  : 
  could not find function "%>%"
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/hydroToolkit.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/hypercube.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/hyperSMURF.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/hyperSpec.Rcheck/00install.out' for details.
Packages in Depends field not imported from:
  'R.utils' 'ape'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
requiprobable: no visible global function definition for 'extract'
requiprobable : make.tree: no visible global function definition for
  'extract'
requiprobable : make.tree: no visible global function definition for
  'runif'
rgenetree: no visible global function definition for 'dbinom'
rgenetree: no visible global function definition for 'dnbinom'
rgenetree: no visible global function definition for 'runif'
rgenetree: no visible global function definition for 'rbinom'
rgenetree: no visible global function definition for 'rnbinom'
Undefined global functions or variables:
  dbinom dnbinom extract rbinom rnbinom runif
Consider adding
  importFrom("stats", "dbinom", "dnbinom", "rbinom", "rnbinom", "runif")
to your NAMESPACE file.
conint: no visible global function definition for 'sd'
findroot: no visible global function definition for 'integrate'
hypothesis: no visible global function definition for 'sd'
hypothesis: no visible global function definition for 'integrate'
Undefined global functions or variables:
  integrate sd
Consider adding
  importFrom("stats", "integrate", "sd")
to your NAMESPACE file.
Running examples in 'hypothesisr-Ex.R' failed
The error most likely occurred in:

> ### Name: hs_search
> ### Title: Search hypothes.is annotations
> ### Aliases: hs_search
> 
> ### ** Examples
> 
> # Search for no more than 5 annotations containing the text "ulysses"
> hs_search(text = "ulysses", limit = 5)
No encoding supplied: defaulting to UTF-8.
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: hs_search ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'Getting_started_with_the_R_package_hystReet.Rmd' using rmarkdown

Attaching package: 'lubridate'

The following objects are masked from 'package:base':

    date, intersect, setdiff, union

Quitting from lines 34-39 (Getting_started_with_the_R_package_hystReet.Rmd) 
Error: processing vignette 'Getting_started_with_the_R_package_hystReet.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'Getting_started_with_the_R_package_hystReet.Rmd'

SUMMARY: processing the following file failed:
  'Getting_started_with_the_R_package_hystReet.Rmd'

Error: Vignette re-building failed.
Execution halted
Packages in Depends field not imported from:
  'MCMCpack' 'coda' 'foreach'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
installed size is  6.0Mb
  sub-directories of 1Mb or more:
    doc   5.7Mb
Running examples in 'i2dash-Ex.R' failed
The error most likely occurred in:

> ### Name: add_component
> ### Title: Add content to an i2dashboard object.
> ### Aliases: add_component add_to_sidebar add_colormap add_link
> ###   add_component,i2dashboard,character-method
> ###   add_component,i2dashboard,function-method
> ###   add_component,i2dashboard,gg-method
> ###   add_component,i2dashboard,gt_tbl-method
> ###   add_component,i2dashboard,kableExtra-method
> ###   add_component,i2dashboard,Heatmap-method
> ###   add_component,i2dashboard,ANY-method add_link,i2dashboard-method
> ###   add_colormap,i2dashboard-method
> ###   add_to_sidebar,i2dashboard,character-method
> ###   add_to_sidebar,i2dashboard,function-method
> 
> ### ** Examples
> 
> library(magrittr)
> i2dashboard() -> dashboard
> myFunction <- function(dashboard) paste0("### Generate component\n\n",
+     "Lorem ipsum dolor sit amet\n")
> 
> dashboard %<>% add_component(component = myFunction)
> dashboard %<>% add_component(component = plotly::plot_ly(mtcars, x=~wt, y=~hp),
+     title = "Include htmlwidget")
Error in h(simpleError(msg, call)) : 
  error in evaluating the argument 'component' in selecting a method for function 'add_component': DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: %<>% ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'i2dash-intro.Rmd' using rmarkdown

Attaching package: 'i2dash'

The following object is masked from 'package:graphics':

    title

The following object is masked from 'package:base':

    source

Loading required package: ggplot2

Attaching package: 'ggplot2'

The following object is masked from 'package:i2dash':

    theme

Quitting from lines 152-178 (i2dash-intro.Rmd) 
Error: processing vignette 'i2dash-intro.Rmd' failed with diagnostics:
package or namespace load failed for 'plotly' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'i2dash-intro.Rmd'

SUMMARY: processing the following file failed:
  'i2dash-intro.Rmd'

Error: Vignette re-building failed.
Execution halted
Package vignette with placeholder title 'Vignette Title':
  'vignette-IAbin.Rmd'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/iadf.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/IAT.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/IATscores.Rcheck/00install.out' for details.
installed size is  5.7Mb
  sub-directories of 1Mb or more:
    data   3.0Mb
    libs   2.6Mb
Found the following sources/headers with CR or CRLF line endings:
  inst/include/MHRProbit.h
  inst/include/MHRmixture.h
  inst/include/MHXIProbit.h
  inst/include/MHXImixture.h
  inst/include/MixtureMain.h
  inst/include/ProbitMain.h
  inst/include/pRMHProbit.h
  inst/include/pRMHXIProbit.h
  inst/include/pRMHXImixture.h
  inst/include/pRMHmixture.h
  inst/include/prMixture.h
Some Unix compilers require LF line endings.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ibb.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/IBCF.MTME.Rcheck/00install.out' for details.
ibdhap.barplot: no visible global function definition for 'rect'
ibdhap.compare.loci: no visible global function definition for 'hist'
ibdhap.compare.segs: no visible global function definition for 'tail'
ibdhap.make.calls: no visible global function definition for
  'count.fields'
ibdhap.make.calls: no visible global function definition for
  'read.table'
ibdhap.make.true: no visible global function definition for
  'read.table'
ibdhap.names: no visible global function definition for 'count.fields'
ibdhap.names: no visible global function definition for 'read.table'
ibdhap.reduce.states: no visible global function definition for
  'read.table'
ibdhap.reduce.states: no visible global function definition for
  'write.table'
Undefined global functions or variables:
  count.fields hist read.table rect tail write.table
Consider adding
  importFrom("graphics", "hist", "rect")
  importFrom("utils", "count.fields", "read.table", "tail",
             "write.table")
to your NAMESPACE file.
CreateVoronoi: no visible global function definition for 'slot'
CreateVoronoi : <anonymous>: no visible global function definition for
  'slot'
CreateVoronoi: no visible global function definition for 'chull'
ExtractIMFi2D: no visible global function definition for 'par'
LocatedAtBoundary: no visible global function definition for
  'txtProgressBar'
LocatedAtBoundary: no visible global function definition for
  'setTxtProgressBar'
PlotFit: no visible global function definition for 'par'
iBEEMD: no visible global function definition for 'is'
iBEEMD: no visible global function definition for 'sd'
iBEEMD: no visible global function definition for 'txtProgressBar'
iBEEMD: no visible global function definition for 'rnorm'
iBEEMD: no visible global function definition for 'setTxtProgressBar'
iBEEMD: no visible global function definition for 'terrain.colors'
rbfcreate: no visible global function definition for 'is'
rbfcreate : rbfAssemble: no visible global function definition for
  'dist'
rbfinterp: no visible global function definition for 'is'
rbfinterp: no visible global function definition for 'dist'
Undefined global functions or variables:
  chull dist is par rnorm sd setTxtProgressBar slot terrain.colors
  txtProgressBar
Consider adding
  importFrom("grDevices", "chull", "terrain.colors")
  importFrom("graphics", "par")
  importFrom("methods", "is", "slot")
  importFrom("stats", "dist", "rnorm", "sd")
  importFrom("utils", "setTxtProgressBar", "txtProgressBar")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Package vignette with placeholder title 'Vignette Title':
  'ibmsunburst.Rmd'
Malformed Title field: should not end in a period.
Iboot: no visible global function definition for 'quantile'
Undefined global functions or variables:
  quantile
Consider adding
  importFrom("stats", "quantile")
to your NAMESPACE file.
..placeOrder: no visible global function definition for 'str'
.reqMktData.vignette: no visible global function definition for
  'flush.console'
e_portfolio_value: no visible global function definition for 'str'
print.eventPortfolioValue: no visible global function definition for
  'str'
print.twsContract: no visible global function definition for 'str'
print.twsContractDetails: no visible global function definition for
  'str'
print.twsOrder: no visible global function definition for 'str'
print.twsOrderState: no visible global function definition for 'str'
print.twsScannerSubscription: no visible global function definition for
  'str'
reqAccountUpdates: no visible binding for global variable 'timestamp'
reqContractDetails: no visible binding for global variable 'timestamp'
reqHistoricalData: no visible global function definition for
  'flush.console'
reqHistoricalData: no visible global function definition for
  'write.table'
Undefined global functions or variables:
  flush.console str timestamp write.table
Consider adding
  importFrom("utils", "flush.console", "str", "timestamp", "write.table")
to your NAMESPACE file.
installed size is  6.1Mb
  sub-directories of 1Mb or more:
    data   6.1Mb
Malformed Description field: should contain one or more complete sentences.
'library' or 'require' call to 'tcltk' which was already attached by Depends.
  Please remove these calls from your code.
Package in Depends field not imported from: 'tcltk'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
ICA: no visible global function definition for 'runif'
Undefined global functions or variables:
  runif
Consider adding
  importFrom("stats", "runif")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ICAMS.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
ICCbare: no visible global function definition for 'na.omit'
ICCbare: no visible global function definition for 'formula'
ICCbare: no visible global function definition for 'replications'
ICCbare: no visible global function definition for 'aggregate'
ICCbare: no visible global function definition for 'anova'
ICCbare: no visible global function definition for 'aov'
ICCbareF: no visible global function definition for 'aggregate'
ICCest: no visible global function definition for 'na.omit'
ICCest: no visible global function definition for 'anova'
ICCest: no visible global function definition for 'aov'
ICCest: no visible global function definition for 'aggregate'
ICCest: no visible global function definition for 'qf'
ICCest: no visible global function definition for 'qnorm'
Nest: no visible global function definition for 'qnorm'
effort : CIW: no visible global function definition for 'qf'
effort: no visible global function definition for 'axis'
effort: no visible global function definition for 'lines'
effort: no visible global function definition for 'legend'
Undefined global functions or variables:
  aggregate anova aov axis formula legend lines na.omit qf qnorm
  replications
Consider adding
  importFrom("graphics", "axis", "legend", "lines")
  importFrom("stats", "aggregate", "anova", "aov", "formula", "na.omit",
             "qf", "qnorm", "replications")
to your NAMESPACE file.
installed size is  8.1Mb
  sub-directories of 1Mb or more:
    data   7.3Mb
Running examples in 'ICD10gm-Ex.R' failed
The error most likely occurred in:

> ### Name: icd_expand
> ### Title: Expand list of ICD codes to include all possible subcodes
> ### Aliases: icd_expand
> 
> ### ** Examples
> 
> # Incomplete or non-terminal codes expand to the right.
> # This is useful to specified code blocks in a compact manner
> icd_meta <- data.frame(ICD = "R1")
> icd_expand(icd_meta, year = 2019)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: icd_expand ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'icd10gm_intro.Rmd' using rmarkdown
Quitting from lines 72-76 (icd10gm_intro.Rmd) 
Error: processing vignette 'icd10gm_intro.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'icd10gm_intro.Rmd'

SUMMARY: processing the following file failed:
  'icd10gm_intro.Rmd'

Error: Vignette re-building failed.
Execution halted
installed size is  7.2Mb
  sub-directories of 1Mb or more:
    R      1.8Mb
    data   1.4Mb
    libs   2.9Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/iCellR.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
'library' or 'require' call to 'KernSmooth' which was already attached by Depends.
  Please remove these calls from your code.
bickde: no visible global function definition for 'optimize'
iclocpoly: no visible global function definition for 'approx'
iclocpoly: no visible global function definition for 'sd'
iclocpoly: no visible global function definition for 'dnorm'
iclocpoly: no visible global function definition for 'pnorm'
iclocpoly: no visible global function definition for 'var'
inmost: no visible global function definition for 'stack'
Undefined global functions or variables:
  approx dnorm optimize pnorm sd stack var
Consider adding
  importFrom("stats", "approx", "dnorm", "optimize", "pnorm", "sd",
             "var")
  importFrom("utils", "stack")
to your NAMESPACE file.
INCAncinner : dian: no visible global function definition for 'cutree'
INCAncinner : bestela: no visible global function definition for
  'cutree'
center: no visible global function definition for 'var'
dbhatta: no visible global function definition for 'as.dist'
dcor: no visible global function definition for 'cor'
dcor: no visible global function definition for 'as.dist'
dgower: no visible global function definition for 'as.dist'
dmahal: no visible global function definition for 'as.dist'
dproc2: no visible global function definition for 'as.dist'
plot.incaix: no visible global function definition for 'barplot'
plot.incanc: no visible global function definition for 'lines'
plot.incanc: no visible global function definition for 'legend'
selectioncluster : dian: no visible global function definition for
  'cutree'
selectioncluster : bestela: no visible global function definition for
  'cutree'
Undefined global functions or variables:
  as.dist barplot cor cutree legend lines var
Consider adding
  importFrom("graphics", "barplot", "legend", "lines")
  importFrom("stats", "as.dist", "cor", "cutree", "var")
to your NAMESPACE file.
Depends: includes the non-default packages:
  'lattice', 'caTools', 'gdata', 'gtools', 'gplots', 'parallel'
Adding so many packages to the search path is excessive and importing
selectively is preferable.
Packages in Depends field not imported from:
  'caTools' 'gdata' 'gplots' 'gtools' 'lattice' 'parallel'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Running examples in 'icrf-Ex.R' failed
The error most likely occurred in:

> ### Name: treesize.icrf
> ### Title: Size of trees in an 'icrf' ensemble
> ### Aliases: treesize.icrf treesize
> 
> ### ** Examples
> 
> # rats data example.
> # Note that this is a toy example. Use a larger ntree and nfold in practice.
> data(rat2)
> ## Don't show: 
>  set.seed(1)
>  rats.icrf <-
+    icrf(~ dose.lvl + weight + male + cage.no, data = rat2,
+         data.type = "currentstatus", currentstatus.label = c("survtime", "tumor"),
+         returnBest = TRUE, ntree=2, nfold=2)
Error in icrf.default(m, L, R, ...) : 
  NA/NaN/Inf in foreign function call (arg 50)
Calls: icrf -> icrf.formula -> icrf.default
Execution halted
PH.ICsurv.EM: no visible global function definition for 'quantile'
PH.ICsurv.EM: no visible global function definition for 'optim'
fast.PH.ICsurv.EM: no visible global function definition for 'quantile'
fast.PH.ICsurv.EM: no visible global function definition for 'optim'
Undefined global functions or variables:
  optim quantile
Consider adding
  importFrom("stats", "optim", "quantile")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
NB: .First.lib is obsolete and will not be used in R >= 3.0.0

idbg.interact: no visible global function definition for
  'capture.output'
idbg.interact: no visible global function definition for 'timestamp'
idbg.print_breakpoints: no visible global function definition for
  'capture.output'
Undefined global functions or variables:
  capture.output timestamp
Consider adding
  importFrom("utils", "capture.output", "timestamp")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/idbr.Rcheck/00install.out' for details.
Running examples in 'ideamdb-Ex.R' failed
The error most likely occurred in:

> ### Name: IdeamLong
> ### Title: Create a day by day IDEAM's data serie
> ### Aliases: IdeamLong
> 
> ### ** Examples
> 
> # Retreive example dataset
> Example_IDEAM <- system.file("extdata", "Example_IDEAM", package = "ideamdb")
> # Create a temporal file
> example.ideam.long <- tempfile()
> write.csv(IdeamLong(Example_IDEAM), file = example.ideam.long)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: write.csv ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Running examples in 'idefix-Ex.R' failed
The error most likely occurred in:

> ### Name: Datatrans
> ### Title: Data transformation.
> ### Aliases: Datatrans
> 
> ### ** Examples
> 
> idefix.data <- aggregate_design 
> des <- as.matrix(idefix.data[, 3:8], ncol = 6)
> y <- idefix.data[, 9]
> bayesm.data <- Datatrans(pkg = "bayesm", des = des, y = y, 
+ n.alts = 2, n.sets = 8, n.resp = 7, bin = TRUE)
[1] "The dataset is ready to be used for bayesm package"
> Mix.pro.data <- Datatrans(pkg = "Mixed.Probit", des = des, y = y,
+  n.alts = 2, n.sets = 8, n.resp = 7, bin = TRUE)
[1] "The dataset is ready to be used for Mixed Probit Estimation"
> mlogit.data <- Datatrans(pkg = "mlogit", des = des, y = y,
+  n.alts = 2, n.sets = 8, n.resp = 7, bin = TRUE)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: Datatrans ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/idem.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/IDE.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/idiogramFISH.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/idmodelr.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
comp.uri: no visible global function definition for 'quantile'
est.IDR: no visible global function definition for 'ecdf'
get.pseudo.mix: no visible global function definition for 'pnorm'
get.uri.2d: no visible global function definition for 'smooth.spline'
get.uri.2d: no visible global function definition for 'predict'
Undefined global functions or variables:
  ecdf pnorm predict quantile smooth.spline
Consider adding
  importFrom("stats", "ecdf", "pnorm", "predict", "quantile",
             "smooth.spline")
to your NAMESPACE file.
Packages in Depends field not imported from:
  'XML' 'vegan'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Package suggested but not available for checking: 'ie2miscdata'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/IETD.Rcheck/00install.out' for details.
ROC_plot: no visible global function definition for 'pdf'
ROC_plot: no visible global function definition for 'par'
ROC_plot: no visible global function definition for 'dev.off'
Ymean_compare: no visible binding for global variable 'sd'
Ymean_compare: no visible global function definition for 'pdf'
Ymean_compare: no visible global function definition for 'par'
Ymean_compare: no visible global function definition for 'dev.off'
data_simulation: no visible global function definition for 'rnorm'
gibbs_sampling: no visible global function definition for 'rnorm'
mcmc_trace_plot: no visible global function definition for 'pdf'
mcmc_trace_plot: no visible global function definition for 'dev.off'
Undefined global functions or variables:
  dev.off par pdf rnorm sd
Consider adding
  importFrom("grDevices", "dev.off", "pdf")
  importFrom("graphics", "par")
  importFrom("stats", "rnorm", "sd")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
NB: .First.lib is obsolete and will not be used in R >= 3.0.0

ifa.em: no visible global function definition for 'runif'
ifa.init.pca: no visible global function definition for 'var'
ifa.init.pca: no visible global function definition for 'cor'
ifa.init.pca: no visible global function definition for 'runif'
ifa.init.random: no visible global function definition for 'runif'
ifa.init.random: no visible global function definition for 'var'
Undefined global functions or variables:
  cor runif var
Consider adding
  importFrom("stats", "cor", "runif", "var")
to your NAMESPACE file.
Package suggested but not available for checking: 'IFCdata'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/igate.Rcheck/00install.out' for details.
Running examples in 'iglu-Ex.R' failed
The error most likely occurred in:

> ### Name: above_percent
> ### Title: Calculate percentage of values above target thresholds
> ### Aliases: above_percent
> 
> ### ** Examples
> 
> 
> data(example_data_1_subject)
> 
> above_percent(example_data_1_subject)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: above_percent ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'iglu.Rmd' using rmarkdown
Quitting from lines 84-85 (iglu.Rmd) 
Error: processing vignette 'iglu.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'iglu.Rmd'

--- re-building 'metrics_list.Rmd' using rmarkdown
--- finished re-building 'metrics_list.Rmd'

SUMMARY: processing the following file failed:
  'iglu.Rmd'

Error: Vignette re-building failed.
Execution halted
installed size is 17.1Mb
  sub-directories of 1Mb or more:
    R      1.4Mb
    help   1.1Mb
    libs  14.2Mb
Malformed Description field: should contain one or more complete sentences.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ihpdr.Rcheck/00install.out' for details.
Running examples in 'ijtiff-Ex.R' failed
The error most likely occurred in:

> ### Name: as_EBImage
> ### Title: Convert an ijtiff_img to an EBImage::Image.
> ### Aliases: as_EBImage
> 
> ### ** Examples
> 
> img <- read_tif(system.file("img", "Rlogo.tif", package = "ijtiff"))
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: read_tif -> do.call -> <Anonymous>
Execution halted
Error(s) in re-building vignettes:
--- re-building 'reading-and-writing-images.Rmd' using rmarkdown
Quitting from lines 35-37 (reading-and-writing-images.Rmd) 
Error: processing vignette 'reading-and-writing-images.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'reading-and-writing-images.Rmd'

--- re-building 'text-images.Rmd' using rmarkdown
--- finished re-building 'text-images.Rmd'

--- re-building 'the-imagej-problem.Rmd' using rmarkdown
Quitting from lines 53-66 (the-imagej-problem.Rmd) 
Error: processing vignette 'the-imagej-problem.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'the-imagej-problem.Rmd'

SUMMARY: processing the following files failed:
  'reading-and-writing-images.Rmd' 'the-imagej-problem.Rmd'

Error: Vignette re-building failed.
Execution halted
installed size is  5.5Mb
  sub-directories of 1Mb or more:
    extdata   1.7Mb
    libs      3.7Mb
installed size is 12.4Mb
  sub-directories of 1Mb or more:
    dlib-19.20   8.9Mb
    libs         2.8Mb
installed size is  7.0Mb
  sub-directories of 1Mb or more:
    libs   6.8Mb
installed size is 23.2Mb
  sub-directories of 1Mb or more:
    data      1.4Mb
    doc       1.1Mb
    extdata   1.0Mb
    include   3.0Mb
    libs     16.0Mb
Running examples in 'imager-Ex.R' failed
The error most likely occurred in:

> ### Name: as.cimg.data.frame
> ### Title: Create an image from a data.frame
> ### Aliases: as.cimg.data.frame
> 
> ### ** Examples
> 
> #Create a data.frame with columns x,y and value
> df <- expand.grid(x=1:10,y=1:10) %>% dplyr::mutate(value=x*y)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: %>% ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'gettingstarted.Rmd' using rmarkdown
Loading required package: magrittr

Attaching package: 'imager'

The following object is masked from 'package:magrittr':

    add

The following objects are masked from 'package:stats':

    convolve, spectrum

The following object is masked from 'package:graphics':

    frame

The following object is masked from 'package:base':

    save.image

Quitting from lines 152-158 (gettingstarted.Rmd) 
Error: processing vignette 'gettingstarted.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'gettingstarted.Rmd'

--- re-building 'pixsets.Rmd' using rmarkdown
Loading required package: magrittr

Attaching package: 'imager'

The following object is masked from 'package:magrittr':

    add

The following objects are masked from 'package:stats':

    convolve, spectrum

The following object is masked from 'package:graphics':

    frame

The following object is masked from 'package:base':

    save.image

Quitting from lines 107-108 (pixsets.Rmd) 
Error: processing vignette 'pixsets.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'pixsets.Rmd'

SUMMARY: processing the following files failed:
  'gettingstarted.Rmd' 'pixsets.Rmd'

Error: Vignette re-building failed.
Execution halted
installed size is 10.8Mb
  sub-directories of 1Mb or more:
    R  10.8Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/imdbapi.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/iMediate.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/imfr.Rcheck/00install.out' for details.
Running examples in 'imgpalr-Ex.R' failed
The error most likely occurred in:

> ### Name: image_pal
> ### Title: Create a color palette from an image
> ### Aliases: image_pal
> 
> ### ** Examples
> 
> set.seed(1)
> x <- system.file("blue-yellow.jpg", package = "imgpalr")
> 
> # Focus on bright, saturated colors for divergent palette:
> image_pal(x, n = 3, type = "div",
+   saturation = c(0.75, 1), brightness = c(0.75, 1), plot = TRUE)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: image_pal ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Running 'testthat.R' [3s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(imgpalr)
  > 
  > test_check("imgpalr")
  -- 1. Error: image_pal and image_quantmap returns as expected (@test-pal.R#10)  
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. imgpalr::image_pal(x, seed = 1, plot = FALSE)
    2. imgpalr:::.filter_colors(a, bw, brightness, saturation)
    3. base::expand.grid(1:dim(a)[2], dim(a)[1]:1)
   10. dplyr::mutate(...)
   11. base::getExportedValue(pkg, name)
   12. base::asNamespace(ns)
   13. base::getNamespace(ns)
   14. base::loadNamespace(name)
   15. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 9 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: image_pal and image_quantmap returns as expected (@test-pal.R#10) 
  
  Error: testthat unit tests failed
  Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/imgrec.Rcheck/00install.out' for details.
IMIS: no visible global function definition for 'sample.prior'
IMIS: no visible global function definition for 'var'
IMIS: no visible global function definition for 'cov'
IMIS: no visible global function definition for 'prior'
IMIS: no visible global function definition for 'likelihood'
IMIS : posterior: no visible global function definition for 'prior'
IMIS : posterior: no visible global function definition for
  'likelihood'
IMIS: no visible global function definition for 'optim'
IMIS: no visible global function definition for 'rnorm'
IMIS: no visible global function definition for 'mahalanobis'
IMIS: no visible global function definition for 'cov.wt'
IMIS: no visible global function definition for 'dnorm'
Undefined global functions or variables:
  cov cov.wt dnorm likelihood mahalanobis optim prior rnorm
  sample.prior var
Consider adding
  importFrom("stats", "cov", "cov.wt", "dnorm", "mahalanobis", "optim",
             "rnorm", "var")
to your NAMESPACE file.
prepare_Rd: IMIS.Rd:26: Dropping empty section \keyword
Running examples in 'iml-Ex.R' failed
The error most likely occurred in:

> ### Name: Predictor
> ### Title: Predictor object
> ### Aliases: Predictor
> 
> ### ** Examples
> 
> library("mlr")
Loading required package: ParamHelpers
Error: package or namespace load failed for 'mlr' in library.dynam(lib, package, package.lib):
 DLL 'mlr' not found: maybe not installed for this architecture?
Execution halted
Running 'testthat.R' [5s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(checkmate)
  > library(iml)
  > 
  > test_check("iml")
  Error: package or namespace load failed for 'mlr' in library.dynam(lib, package, package.lib):
   DLL 'mlr' not found: maybe not installed for this architecture?
  Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/immcp.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/immunarch.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/imp4p.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/impactflu.Rcheck/00install.out' for details.
heter_IV2: no visible global function definition for 'poly'
heter_IV2: no visible global function definition for 'lm'
heter_IV2: no visible global function definition for 'step'
heter_IV2: no visible global function definition for 'pnorm'
heter_IV2: no visible global function definition for 'qnorm'
homo_IV1: no visible global function definition for 'coef'
homo_IV1: no visible global function definition for 'pnorm'
homo_IV1: no visible global function definition for 'qnorm'
Undefined global functions or variables:
  coef lm pnorm poly qnorm step
Consider adding
  importFrom("stats", "coef", "lm", "pnorm", "poly", "qnorm", "step")
to your NAMESPACE file.
prepare_Rd: heter_IV2.Rd:82-84: Dropping empty section \note
prepare_Rd: heter_IV2.Rd:88-90: Dropping empty section \seealso
prepare_Rd: homo_IV1.Rd:65-67: Dropping empty section \note
prepare_Rd: homo_IV1.Rd:71-73: Dropping empty section \seealso
prepare_Rd: impact.Rd:31-33: Dropping empty section \source
Error(s) in re-building vignettes:
--- re-building 'IAT-example.Rmd' using rmarkdown
Warning: Computation failed in `stat_summary()`:
Hmisc package required for this function
Quitting from lines 160-163 (IAT-example.Rmd) 
Error: processing vignette 'IAT-example.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'IAT-example.Rmd'

--- re-building 'SC-IAT-example.Rmd' using rmarkdown
--- finished re-building 'SC-IAT-example.Rmd'

--- re-building 'implicitMeasures.Rmd' using rmarkdown
--- finished re-building 'implicitMeasures.Rmd'

SUMMARY: processing the following file failed:
  'IAT-example.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/implyr.Rcheck/00install.out' for details.
Running examples in 'importar-Ex.R' failed
The error most likely occurred in:

> ### Name: import
> ### Title: This function imports/loads packages as in 'Python', i.e.,
> ###   "import package as alias"
> ### Aliases: import
> 
> ### ** Examples
> 
> import(dplyr, d)
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/IMP.Rcheck/00install.out' for details.
generate.ExpressionData: no visible global function definition for
  'rnorm'
impute.MinDet: no visible binding for global variable 'quantile'
impute.MinProb: no visible binding for global variable 'quantile'
impute.MinProb: no visible binding for global variable 'sd'
impute.MinProb: no visible global function definition for 'median'
impute.MinProb: no visible global function definition for 'rnorm'
impute.QRILC: no visible global function definition for 'qnorm'
impute.QRILC: no visible global function definition for 'quantile'
impute.QRILC: no visible global function definition for 'lm'
insertMVs: no visible global function definition for 'rnorm'
model.Selector: no visible global function definition for 'qnorm'
model.Selector: no visible global function definition for 'quantile'
model.Selector: no visible global function definition for 'lm'
model.Selector: no visible global function definition for 'ecdf'
model.Selector: no visible global function definition for 'pnorm'
pep2prot: no visible binding for global variable 'median'
Undefined global functions or variables:
  ecdf lm median pnorm qnorm quantile rnorm sd
Consider adding
  importFrom("stats", "ecdf", "lm", "median", "pnorm", "qnorm",
             "quantile", "rnorm", "sd")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
impute.mdr: no visible global function definition for 'combn'
Undefined global functions or variables:
  combn
Consider adding
  importFrom("utils", "combn")
to your NAMESPACE file.
There are ::: calls to the package's namespace in its code. A package
  almost never needs to use ::: for its own objects:
  'count_compare'
heal_data: no visible global function definition for 'optimum_k'
heal_data: no visible global function definition for 'optimum_w'
heal_data: no visible global function definition for 'pred_for_w'
Undefined global functions or variables:
  optimum_k optimum_w pred_for_w
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ImputeRobust.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/imputeTestbench.Rcheck/00install.out' for details.
installed size is  5.5Mb
  sub-directories of 1Mb or more:
    data   1.3Mb
    doc    1.1Mb
    libs   2.1Mb
Warning: no function found corresponding to methods exports from 'IM' for: 'initialize'

A namespace must be able to be loaded with just the base namespace
loaded: otherwise if the namespace gets loaded by a saved object, the
session will be unable to start.

Probably some imports need to be declared in the NAMESPACE file.
Warning: no function found corresponding to methods exports from 'IM' for: 'initialize'

A namespace must be able to be loaded with just the base namespace
loaded: otherwise if the namespace gets loaded by a saved object, the
session will be unable to start.

Probably some imports need to be declared in the NAMESPACE file.
Packages in Depends field not imported from:
  'bmp' 'jpeg' 'methods' 'png'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
GNU make is a SystemRequirements.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/incgraph.Rcheck/00install.out' for details.
Running examples in 'inctools-Ex.R' failed
The error most likely occurred in:

> ### Name: frrcal
> ### Title: Estimate False-Recent Rate
> ### Aliases: frrcal
> 
> ### ** Examples
> 
> frrcal(data=excalibdata,
+        subid_var = "SubjectID",
+        time_var = "DaysSinceEDDI",
+        recency_cutoff_time = 730.5,
+        recency_rule = "independent_thresholds",
+        recency_vars = c("Result","VL"),
+        recency_params = c(10,0,1000,1),
+        method = "exact",
+        alpha = 0.05)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: frrcal ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'EstimatingIncidence.Rmd' using rmarkdown
--- finished re-building 'EstimatingIncidence.Rmd'

--- re-building 'Introduction.Rmd' using rmarkdown
--- finished re-building 'Introduction.Rmd'

--- re-building 'SurveyDesign.Rmd' using rmarkdown
--- finished re-building 'SurveyDesign.Rmd'

--- re-building 'TestCalibration.Rmd' using rmarkdown
Quitting from lines 82-94 (TestCalibration.Rmd) 
Error: processing vignette 'TestCalibration.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'TestCalibration.Rmd'

SUMMARY: processing the following file failed:
  'TestCalibration.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/inegiR.Rcheck/00install.out' for details.
Malformed Title field: should not end in a period.
IDM.bootCI: no visible global function definition for 'cov'
IDM.bootCI: no visible global function definition for 'cor'
IDM.bootCI: no visible global function definition for 'quantile'
Undefined global functions or variables:
  cor cov quantile
Consider adding
  importFrom("stats", "cor", "cov", "quantile")
to your NAMESPACE file.
Package in Depends field not imported from: 'sandwich'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
infer,coxph: no visible global function definition for 'coef'
infer,coxph: no visible global function definition for 'vcov'
infer,coxph: no visible global function definition for 'sandwich'
infer,coxph: no visible global function definition for 'pnorm'
infer,coxph: no visible global function definition for 'qnorm'
infer,gee: no visible global function definition for 'coef'
infer,gee: no visible global function definition for 'pnorm'
infer,gee: no visible global function definition for 'qnorm'
infer,glm: no visible global function definition for 'coef'
infer,glm: no visible global function definition for 'sandwich'
infer,glm: no visible global function definition for 'vcov'
infer,glm: no visible global function definition for 'pnorm'
infer,glm: no visible global function definition for 'qnorm'
infer,lm: no visible global function definition for 'coef'
infer,lm: no visible global function definition for 'sandwich'
infer,lm: no visible global function definition for 'vcov'
infer,lm: no visible global function definition for 'pnorm'
infer,lm: no visible global function definition for 'qnorm'
infer,lme: no visible global function definition for 'coef'
infer,lme: no visible global function definition for 'fixed.effects'
infer,lme: no visible global function definition for 'vcov'
infer,lme: no visible global function definition for 'pnorm'
infer,lme: no visible global function definition for 'qnorm'
infer,mer: no visible global function definition for 'coef'
infer,mer: no visible global function definition for 'vcov'
infer,mer: no visible global function definition for 'pnorm'
infer,mer: no visible global function definition for 'qnorm'
infer,mer: no visible binding for global variable 'fm1'
Undefined global functions or variables:
  coef fixed.effects fm1 pnorm qnorm sandwich vcov
Consider adding
  importFrom("stats", "coef", "pnorm", "qnorm", "vcov")
to your NAMESPACE file.
Malformed Title field: should not end in a period.
Package in Depends field not imported from: 'survival'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
contrib: no visible global function definition for 'aggregate'
est.expDeath : surv_p: no visible global function definition for
  'survfit'
est.expDeath : surv_p: no visible global function definition for
  'approx'
function1: no visible global function definition for 'coxph.detail'
inference.SMR: no visible global function definition for 'qnorm'
var.expDeath : surv_p: no visible global function definition for
  'survfit'
var.expDeath : surv_p: no visible global function definition for
  'approx'
Undefined global functions or variables:
  aggregate approx coxph.detail qnorm survfit
Consider adding
  importFrom("stats", "aggregate", "approx", "qnorm")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/infer.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/inferr.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/influenceAUC.Rcheck/00install.out' for details.
BugReports field should be the URL of a single webpage
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/InformativeCensoring.Rcheck/00install.out' for details.
gen.intercepts: no visible global function definition for 'contr.SAS'
Undefined global functions or variables:
  contr.SAS
Consider adding
  importFrom("stats", "contr.SAS")
to your NAMESPACE file.
entropy: no visible global function definition for 'na.omit'
interinformation: no visible global function definition for 'na.omit'
multiinformation: no visible global function definition for 'na.omit'
mutinformation: no visible global function definition for 'na.omit'
Undefined global functions or variables:
  na.omit
Consider adding
  importFrom("stats", "na.omit")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
getInfra: no visible global function definition for 'txtProgressBar'
getInfra: no visible global function definition for 'download.file'
getInfra: no visible global function definition for 'setTxtProgressBar'
getInfra : <anonymous>: no visible global function definition for
  'download.file'
Undefined global functions or variables:
  download.file setTxtProgressBar txtProgressBar
Consider adding
  importFrom("utils", "download.file", "setTxtProgressBar",
             "txtProgressBar")
to your NAMESPACE file.
Unexported object imported by a ':::' call: 'ltm:::crf.GPCM'
  See the note in ?`:::` about the use of this operator.
Jeffreys: no visible global function definition for 'integrate'
Jeffreys: no visible global function definition for 'splinefun'
count.rows: no visible global function definition for 'tail'
count.rows: no visible global function definition for 'head'
cprobs : <anonymous>: no visible global function definition for
  'plogis'
inf.func.ltm : f: no visible global function definition for 'plogis'
iota: no visible global function definition for 'integrate'
iota: no visible global function definition for 'optimize'
iota: no visible global function definition for 'pchisq'
iota.c : rirm: no visible global function definition for 'coef'
iota.c: no visible global function definition for 'integrate'
iota.c: no visible global function definition for 'sd'
iota.u: no visible global function definition for 'integrate'
iprobs : <anonymous>: no visible global function definition for
  'plogis'
logL.ltm : logL: no visible global function definition for 'dbinom'
logL.ltm : logL: no visible global function definition for 'plogis'
logL.ltm : logL : <anonymous>: no visible global function definition
  for 'plogis'
rJeffreys : Jpinv.min: no visible global function definition for
  'integrate'
rJeffreys : Jpinv: no visible global function definition for 'nlminb'
rJeffreys : Jpinv: no visible global function definition for 'qnorm'
rJeffreys: no visible global function definition for 'runif'
Undefined global functions or variables:
  coef dbinom head integrate nlminb optimize pchisq plogis qnorm runif
  sd splinefun tail
Consider adding
  importFrom("stats", "coef", "dbinom", "integrate", "nlminb",
             "optimize", "pchisq", "plogis", "qnorm", "runif", "sd",
             "splinefun")
  importFrom("utils", "head", "tail")
to your NAMESPACE file.
Running examples in 'InjurySeverityScore-Ex.R' failed
The error most likely occurred in:

> ### Name: injury_score
> ### Title: Calculate injury severity score from ICD-9
> ### Aliases: injury_score
> 
> ### ** Examples
> 
> pat_id <- c(2,2,2,2,2,1,2,1,2,1,2,1,1,1,1,1,1,1,1,1,1,1,1,1)
> icd9 <- c('874.2', '874.8', '900.81', '900.82', '900.89', '805.06', 
+           'E966', '805.07', 'V14.0', '807.02', 'V70.4', '821.01', '823.20', 
+           '860.0', '861.01', '861.21', '861.22', '863.84', '864.04', '865.04', 
+           '865.09', '866.02', '868.04', '958.4')
> sample_data <- data.frame(subj = pat_id, code = icd9, stringsAsFactors = FALSE)
> injury_score(sample_data, subj, code)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: injury_score ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'vignette.Rmd' using rmarkdown
Quitting from lines 235-249 (vignette.Rmd) 
Error: processing vignette 'vignette.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'vignette.Rmd'

SUMMARY: processing the following file failed:
  'vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'insee-Ex.R' failed
The error most likely occurred in:

> ### Name: get_insee
> ### Title: Get data from INSEE BDM database with a SDMX query link
> ### Aliases: get_insee
> 
> ### ** Examples
> 
> insee_link = "http://www.bdm.insee.fr/series/sdmx/data/SERIES_BDM"
> insee_query = file.path(insee_link, paste0("010539365","?", "firstNObservations=1"))
> data = get_insee(insee_query)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: get_insee ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Malformed Title field: should not end in a period.
'library' or 'require' calls to packages already attached by Depends:
  'compiler' 'deSolve' 'lattice' 'nlme'
  Please remove these calls from your code.
NB: .First.lib is obsolete and will not be used in R >= 3.0.0
File 'insideRODE/R/zzz.r':
  .First.lib calls:
    require(nlme)
    require(lattice)
    require(deSolve)
    require(compiler)

Package startup functions should not change the search path.
See section 'Good practice' in '?.onAttach'.

cfLSODE: no visible global function definition for 'deriv'
cfODE: no visible global function definition for 'deriv'
cfVODE: no visible global function definition for 'deriv'
cpLSODE: no visible global function definition for 'deriv'
cpODE: no visible global function definition for 'deriv'
cpVODE: no visible global function definition for 'deriv'
nlmLSODE: no visible global function definition for 'deriv'
nlmLSODEcp: no visible global function definition for 'deriv'
nlmODE: no visible global function definition for 'deriv'
nlmODEcp: no visible global function definition for 'deriv'
nlmVODE: no visible global function definition for 'deriv'
nlmVODEcp: no visible global function definition for 'deriv'
Undefined global functions or variables:
  deriv
Consider adding
  importFrom("stats", "deriv")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/inspectdf.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/INSPIRE.Rcheck/00install.out' for details.
Malformed Title field: should not end in a period.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/insurancerating.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/integr.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/intePareto.Rcheck/00install.out' for details.
Error(s) in re-building vignettes:
--- re-building 'categorical.Rmd' using rmarkdown
--- finished re-building 'categorical.Rmd'

--- re-building 'interactions.Rmd' using rmarkdown
`geom_smooth()` using formula 'y ~ x'
`geom_smooth()` using formula 'y ~ x'
`geom_smooth()` using formula 'y ~ x'
Quitting from lines 402-405 (interactions.Rmd) 
Error: processing vignette 'interactions.Rmd' failed with diagnostics:
Install the broom package to use the plot_coefs function.
--- failed re-building 'interactions.Rmd'

SUMMARY: processing the following file failed:
  'interactions.Rmd'

Error: Vignette re-building failed.
Execution halted
Malformed Title field: should not end in a period.
ClearBottomMenuPlot: no visible global function definition for 'rect'
InteractiveIGraph : mousedown: no visible global function definition
  for 'grconvertX'
InteractiveIGraph : mousedown: no visible global function definition
  for 'grconvertY'
InteractiveIGraph : dragmousemove: no visible global function
  definition for 'grconvertX'
InteractiveIGraph : dragmousemove: no visible global function
  definition for 'grconvertY'
InteractiveIGraph : dragmousemove: no visible global function
  definition for 'polygon'
InteractiveIGraph : mouseup: no visible global function definition for
  'grconvertX'
InteractiveIGraph : mouseup: no visible global function definition for
  'grconvertY'
InteractiveIGraph : keybd: no visible global function definition for
  'readClipboard'
InteractiveIGraph : keybd: no visible global function definition for
  'par'
PlotRegionGeneral: no visible global function definition for 'polygon'
plot.InteractiveIGraph: no visible global function definition for 'par'
plot.Menu: no visible global function definition for 'par'
plot.Menu: no visible binding for global variable 'rect'
plot.MenuItem: no visible binding for global variable 'strwidth'
plot.MenuItem: no visible binding for global variable 'strheight'
plot.MenuItem: no visible binding for global variable 'rect'
plot.MenuItem: no visible binding for global variable 'text'
plot.MenuLine: no visible binding for global variable 'rect'
Undefined global functions or variables:
  grconvertX grconvertY par polygon readClipboard rect strheight
  strwidth text
Consider adding
  importFrom("graphics", "grconvertX", "grconvertY", "par", "polygon",
             "rect", "strheight", "strwidth", "text")
  importFrom("utils", "readClipboard")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
interact: no visible global function definition for 'cor'
standardize.matrix: no visible binding for global variable 'var'
standardize.matrix: no visible binding for global variable 'sd'
Undefined global functions or variables:
  cor sd var
Consider adding
  importFrom("stats", "cor", "sd", "var")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
compute_design_performance: no visible global function definition for
  'read.csv'
compute_design_performance : get_power: no visible global function
  definition for 'rnorm'
compute_design_performance : power_curve_plot: no visible global
  function definition for 'lines'
compute_design_performance : power_curve_plot: no visible global
  function definition for 'legend'
compute_design_performance : expected_sample_size_plot: no visible
  global function definition for 'lines'
compute_design_performance : expected_sample_size_plot: no visible
  global function definition for 'legend'
compute_design_performance : expected_duration_plot: no visible global
  function definition for 'lines'
compute_design_performance : expected_duration_plot: no visible global
  function definition for 'legend'
compute_design_performance : boundary_adapt_plot: no visible global
  function definition for 'matplot'
compute_design_performance : boundary_adapt_plot: no visible global
  function definition for 'legend'
compute_design_performance : boundary_standard_H0C_plot: no visible
  global function definition for 'matplot'
compute_design_performance : boundary_standard_H0C_plot: no visible
  global function definition for 'legend'
compute_design_performance : boundary_standard_H01_plot: no visible
  global function definition for 'matplot'
compute_design_performance : boundary_standard_H01_plot: no visible
  global function definition for 'legend'
Undefined global functions or variables:
  legend lines matplot read.csv rnorm
Consider adding
  importFrom("graphics", "legend", "lines", "matplot")
  importFrom("stats", "rnorm")
  importFrom("utils", "read.csv")
to your NAMESPACE file.
HH: no visible global function definition for 'var'
HH: no visible global function definition for 'qnorm'
exactCI: no visible global function definition for 'quantile'
sample.n: no visible global function definition for 'rbinom'
Undefined global functions or variables:
  qnorm quantile rbinom var
Consider adding
  importFrom("stats", "qnorm", "quantile", "rbinom", "var")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/interflex.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/internetarchive.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/interplot.Rcheck/00install.out' for details.
Interpol: no visible global function definition for 'splinefun'
Undefined global functions or variables:
  splinefun
Consider adding
  importFrom("stats", "splinefun")
to your NAMESPACE file.
prepare_Rd: AAdescriptor.Rd:25-27: Dropping empty section \details
prepare_Rd: AAdescriptor.Rd:39-41: Dropping empty section \note
prepare_Rd: AAdescriptor.Rd:45-47: Dropping empty section \seealso
prepare_Rd: AAindex.Rd:11-12: Dropping empty section \format
prepare_Rd: AAindex.Rd:1080-1081: Dropping empty section \source
prepare_Rd: AAindex.Rd:1085-1086: Dropping empty section \examples
prepare_Rd: Interpol.Rd:35-37: Dropping empty section \details
prepare_Rd: Interpol.Rd:47-49: Dropping empty section \note
prepare_Rd: Interpol.Rd:53-55: Dropping empty section \seealso
prepare_Rd: V3.Rd:11-12: Dropping empty section \format
prepare_Rd: V3.Rd:13-14: Dropping empty section \details
prepare_Rd: V3.Rd:15-16: Dropping empty section \source
prepare_Rd: V3.Rd:20-21: Dropping empty section \examples
Packages in Depends field not imported from:
  'chron' 'date'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Mo.Th.Ra.: no visible global function definition for 'aggregate'
daily_mean: no visible global function definition for 'aggregate'
date.time: no visible global function definition for 'chron'
date.time: no visible global function definition for 'years'
date.time: no visible global function definition for 'days'
date.time: no visible global function definition for 'hours'
par_calibration: no visible global function definition for 'date.mdy'
par_calibration: no visible global function definition for 'as.date'
par_calibration: no visible global function definition for 'aggregate'
plot_meas_sim: no visible global function definition for 'as.date'
plot_meas_sim: no visible global function definition for 'date.mdy'
plot_meas_sim: no visible global function definition for 'par'
plot_meas_sim: no visible global function definition for 'legend'
shape_calibration: no visible global function definition for 'date.mdy'
shape_calibration: no visible global function definition for 'as.date'
shape_calibration: no visible global function definition for
  'aggregate'
Undefined global functions or variables:
  aggregate as.date chron date.mdy days hours legend par years
Consider adding
  importFrom("graphics", "legend", "par")
  importFrom("stats", "aggregate")
to your NAMESPACE file.
icScoreTest: no visible global function definition for 'pnorm'
icScoreTest: no visible global function definition for 'pchisq'
icfit.formula: no visible global function definition for 'terms'
icfit.formula: no visible global function definition for
  'model.extract'
icfitBootCI: no visible global function definition for 'binom.test'
ictest.formula: no visible global function definition for
  'model.extract'
plot.icfit: no visible global function definition for 'gray'
plot.icfit: no visible global function definition for 'axis'
plot.icfit : polygon.icfit: no visible global function definition for
  'polygon'
scoresFromFit: no visible global function definition for 'dnorm'
scoresFromFit: no visible global function definition for 'qnorm'
wsrHLYpclt: no visible global function definition for 'model.matrix'
wsrHLYpclt: no visible global function definition for 'pchisq'
wsrHLYpclt: no visible global function definition for 'pnorm'
Undefined global functions or variables:
  axis binom.test dnorm gray model.extract model.matrix pchisq pnorm
  polygon qnorm terms
Consider adding
  importFrom("grDevices", "gray")
  importFrom("graphics", "axis", "polygon")
  importFrom("stats", "binom.test", "dnorm", "model.extract",
             "model.matrix", "pchisq", "pnorm", "qnorm", "terms")
to your NAMESPACE file.
interventionEffects: no visible binding for global variable 'sd'
interventionEffects: no visible global function definition for 'pt'
interventionEffects: no visible global function definition for 'sd'
interventionalInference: no visible global function definition for 'sd'
interventionalInferenceAdvanced: no visible global function definition
  for 'sd'
linesROC: no visible global function definition for 'segments'
plotMaxML: no visible global function definition for 'segments'
Undefined global functions or variables:
  pt sd segments
Consider adding
  importFrom("graphics", "segments")
  importFrom("stats", "pt", "sd")
to your NAMESPACE file.
'library' or 'require' call to 'maxLik' which was already attached by Depends.
  Please remove these calls from your code.
Package in Depends field not imported from: 'maxLik'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
ILik : rbern: no visible global function definition for 'runif'
ILik : q: no visible global function definition for 'dnorm'
ILik : SlambdaG: no visible global function definition for 'rnorm'
ILik : Pi_hat: no visible global function definition for 'rnorm'
ILik : q: no visible global function definition for 'dgamma'
ILik : SlambdaG: no visible global function definition for 'rgamma'
ILik : Pi_hat: no visible global function definition for 'rgamma'
ILik: no visible global function definition for 'maxLik'
ILik: no visible global function definition for 'coef'
ILik: no visible global function definition for 'hessian'
Undefined global functions or variables:
  coef dgamma dnorm hessian maxLik rgamma rnorm runif
Consider adding
  importFrom("stats", "coef", "dgamma", "dnorm", "rgamma", "rnorm",
             "runif")
to your NAMESPACE file.
Package vignette with placeholder title 'Vignette Title':
  'intubate.Rmd'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/inventorize.Rcheck/00install.out' for details.
Malformed Title field: should not end in a period.
f.B: no visible global function definition for 'pnorm'
f.B.neglog.deriv: no visible global function definition for 'pnorm'
f.B.neglog.deriv: no visible global function definition for 'dnorm'
f.grovest3 : f.est: no visible global function definition for 'survfit'
f.grovest3 : f.est: no visible global function definition for 'lines'
f.grovest3: no visible global function definition for 'model.frame'
f.grovest3: no visible global function definition for 'model.extract'
invGauss: no visible global function definition for 'model.frame'
invGauss: no visible global function definition for 'model.extract'
invGauss: no visible global function definition for 'model.matrix'
predict.invGauss: no visible global function definition for
  'model.frame'
predict.invGauss: no visible global function definition for
  'model.extract'
predict.invGauss: no visible global function definition for
  'model.matrix'
predict.invGauss: no visible binding for global variable 'formula'
predict.invGauss: no visible binding for global variable 'data'
summary.invGauss: no visible global function definition for 'pnorm'
Undefined global functions or variables:
  data dnorm formula lines model.extract model.frame model.matrix pnorm
  survfit
Consider adding
  importFrom("graphics", "lines")
  importFrom("stats", "dnorm", "formula", "model.extract", "model.frame",
             "model.matrix", "pnorm")
  importFrom("utils", "data")
to your NAMESPACE file.
Package suggested but not available for checking: 'iNZightPlots'
Running examples in 'iNZightTools-Ex.R' failed
The error most likely occurred in:

> ### Name: aggregateData
> ### Title: Aggregate data by categorical variables
> ### Aliases: aggregateData
> 
> ### ** Examples
> 
> aggregated <-
+     aggregateData(iris,
+         vars = c("Species"),
+         summaries = c("mean", "sd", "iqr")
+     )
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: aggregateData ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Running examples in 'iNZightTS-Ex.R' failed
The error most likely occurred in:

> ### Name: decompose
> ### Title: Decompose a time series object
> ### Aliases: decompose plot.inzdecomp
> 
> ### ** Examples
> 
> t <- iNZightTS(visitorsQ)
> decomp.ts <- decompose(t, data.name = "Visitors")
> plot(decomp.ts)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: plot ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/IOHanalyzer.Rcheck/00install.out' for details.
flowsRandom: no visible global function definition for 'dmultinom'
readBed: no visible global function definition for 'read.table'
Undefined global functions or variables:
  dmultinom read.table
Consider adding
  importFrom("stats", "dmultinom")
  importFrom("utils", "read.table")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/iotables.Rcheck/00install.out' for details.
File 'iotools/libs/i386/iotools.dll':
  Found non-API calls to R: 'R_GetConnection', 'R_ReadConnection',
    'R_WriteConnection'
File 'iotools/libs/x64/iotools.dll':
  Found non-API calls to R: 'R_GetConnection', 'R_ReadConnection',
    'R_WriteConnection'

Compiled code should not call non-API entry points in R.

See 'Writing portable packages' in the 'Writing R Extensions' manual.
Warning: no function found corresponding to methods exports from 'ipdmeta' for: 'show'

A namespace must be able to be loaded with just the base namespace
loaded: otherwise if the namespace gets loaded by a saved object, the
session will be unable to start.

Probably some imports need to be declared in the NAMESPACE file.
Package in Depends field not imported from: 'methods'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
ipd.meta.power.base.function : power: no visible global function
  definition for 'qnorm'
ipd.meta.power.base.function : power: no visible global function
  definition for 'pnorm'
ipd.meta.power.base.function: no visible global function definition for
  'qnorm'
ipdlme.hetero: no visible global function definition for 'new'
ipdlme.homo: no visible global function definition for 'new'
plot_ipdlme: no visible global function definition for 'par'
plot_ipdlme: no visible global function definition for 'abline'
plot_ipdlme: no visible global function definition for 'axis'
plot_ipdlme: no visible global function definition for 'segments'
confint,ipdlme: no visible global function definition for 'qt'
plot,ipdlme: no visible global function definition for 'par'
plot,ipdlme: no visible global function definition for 'abline'
plot,ipdlme: no visible global function definition for 'axis'
plot,ipdlme: no visible global function definition for 'segments'
summary,ipdlme: no visible global function definition for 'pt'
Undefined global functions or variables:
  abline axis new par pnorm pt qnorm qt segments
Consider adding
  importFrom("graphics", "abline", "axis", "par", "segments")
  importFrom("methods", "new")
  importFrom("stats", "pnorm", "pt", "qnorm", "qt")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Running examples in 'ipeadatar-Ex.R' failed
The error most likely occurred in:

> ### Name: available_subjects
> ### Title: List with available subjects
> ### Aliases: available_subjects
> 
> ### ** Examples
> 
> # Available subjects (in English)
> all_subjects <- available_subjects()
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: available_subjects ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ipfr.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ipft.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ipmisc.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ipumsr.Rcheck/00install.out' for details.
Running examples in 'IPWboxplot-Ex.R' failed
The error most likely occurred in:

> ### Name: IPW.ASYM.boxplot
> ### Title: Boxplot adapted to skewness and missing values
> ### Aliases: IPW.ASYM.boxplot
> ### Keywords: quantile boxplot missing inverse probability weighted
> 
> ### ** Examples
> 
> 
> ## A real data example
> 
> 
> library(mice)
Error: package or namespace load failed for 'mice' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Package vignette with placeholder title 'Vignette Title':
  'my-vignette.Rmd'
Error(s) in re-building vignettes:
--- re-building 'my-vignette.Rmd' using rmarkdown
Quitting from lines 46-55 (my-vignette.Rmd) 
Error: processing vignette 'my-vignette.Rmd' failed with diagnostics:
package or namespace load failed for 'mice' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'my-vignette.Rmd'

SUMMARY: processing the following file failed:
  'my-vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ipw.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/iRF.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/IRISMustangMetrics.Rcheck/00install.out' for details.
Package vignette with placeholder title 'Vignette Title':
  'irtoys-vignette.Rmd'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/irtplay.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
dendrify: no visible binding for global variable 'item'
dendrify: no visible binding for global variable 'node'
dendrify: no visible binding for global variable 'value'
exogenize: no visible binding for global variable 'item'
Undefined global functions or variables:
  item node value
isbf: no visible global function definition for 'var'
isbf: no visible global function definition for 'qnorm'
isbfReg: no visible global function definition for 'var'
isbfReg: no visible global function definition for 'qnorm'
Undefined global functions or variables:
  qnorm var
Consider adding
  importFrom("stats", "qnorm", "var")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
residualplot: no visible global function definition for 'predict'
residualplot: no visible global function definition for 'rstandard'
residualplot: no visible global function definition for
  'complete.cases'
residualplot: no visible global function definition for 'points'
residualplot: no visible global function definition for 'lines'
residualplot: no visible global function definition for 'smooth.spline'
residualplot: no visible global function definition for 'sd'
residualplot: no visible global function definition for 'rgb'
residualplot: no visible global function definition for 'polygon'
Undefined global functions or variables:
  complete.cases lines points polygon predict rgb rstandard sd
  smooth.spline
Consider adding
  importFrom("grDevices", "rgb")
  importFrom("graphics", "lines", "points", "polygon")
  importFrom("stats", "complete.cases", "predict", "rstandard", "sd",
             "smooth.spline")
to your NAMESPACE file.
Running examples in 'IsingFit-Ex.R' failed
The error most likely occurred in:

> ### Name: IsingFit
> ### Title: Network estimation using the eLasso method
> ### Aliases: IsingFit
> 
> ### ** Examples
> 
> library("IsingSampler")
Loading required package: Rcpp
Error: package or namespace load failed for 'IsingSampler' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/IsingSampler.Rcheck/00install.out' for details.
installed size is  5.6Mb
  sub-directories of 1Mb or more:
    doc    1.1Mb
    libs   2.9Mb
Error(s) in re-building vignettes:
--- re-building 'isocat.Rmd' using rmarkdown
Quitting from lines 16-33 (isocat.Rmd) 
Error: processing vignette 'isocat.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in inDL(x, as.logical(local), as.logical(now), ...):
 unable to load shared object 'D:/temp/Rtmp2fmcLt/RLIBS_271fc46c35ec2/dplyr/libs/x64/dplyr.dll':
  LoadLibrary failure:  Das angegebene Modul wurde nicht gefunden.

--- failed re-building 'isocat.Rmd'

SUMMARY: processing the following file failed:
  'isocat.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'IsoCheck-Ex.R' failed
The error most likely occurred in:

> ### Name: checkStarIsomorphism
> ### Title: Checking the Isomorphism of Two Stars
> ### Aliases: checkStarIsomorphism
> ### Keywords: Star Isomorphism
> 
> ### ** Examples
> 
> 
> ## Example 1: Two stars of PG(4,2) consisting of 4-flats
> data(starn5t3a)
> data(starn5t3b)
> test1 <- checkStarIsomorphism(starn5t3a, starn5t3b, returnfirstIEC = TRUE)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: checkStarIsomorphism ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Malformed Title field: should not end in a period.
C.cal: no visible global function definition for 'as.stepfun'
bandwidth.choose.cv: no visible global function definition for 'isoreg'
g.density: no visible global function definition for 'as.stepfun'
g.density: no visible global function definition for 'dnorm'
h.density: no visible global function definition for 'dnorm'
iso.bt.unit: no visible global function definition for 'quantile'
iso.bt.unit.sub: no visible global function definition for 'isoreg'
iso.bt.unit.sub: no visible global function definition for 'as.stepfun'
iso.bt.wald.unit: no visible global function definition for 'var'
iso.ci: no visible global function definition for 'isoreg'
iso.ci.transform.unit: no visible global function definition for
  'as.stepfun'
Undefined global functions or variables:
  as.stepfun dnorm isoreg quantile var
Consider adding
  importFrom("stats", "as.stepfun", "dnorm", "isoreg", "quantile", "var")
to your NAMESPACE file.
ACO : bordacircular: no visible global function definition for
  'medianCircular'
Undefined global functions or variables:
  medianCircular
'library' or 'require' call to 'proxy' in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
isopam : core: no visible global function definition for 'dist'
isopam : core: no visible global function definition for 'write.table'
isopam : core: no visible global function definition for 'as.dist'
isopam : core: no visible global function definition for
  'txtProgressBar'
isopam : core: no visible global function definition for
  'setTxtProgressBar'
isopam : core: no visible global function definition for 'aggregate'
isopam: no visible binding for global variable 'var'
isopam: no visible global function definition for 'na.omit'
isopam: no visible global function definition for 'write.table'
isopam: no visible global function definition for 'bmp'
isopam: no visible global function definition for 'dev.off'
isotab: no visible global function definition for 'aggregate'
isotab : fshtest: no visible global function definition for 'dhyper'
isotab : fshtest : pnhyper: no visible global function definition for
  'phyper'
Undefined global functions or variables:
  aggregate as.dist bmp dev.off dhyper dist na.omit phyper
  setTxtProgressBar txtProgressBar var write.table
Consider adding
  importFrom("grDevices", "bmp", "dev.off")
  importFrom("stats", "aggregate", "as.dist", "dhyper", "dist",
             "na.omit", "phyper", "var")
  importFrom("utils", "setTxtProgressBar", "txtProgressBar",
             "write.table")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ISRaD.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/iSTATS.Rcheck/00install.out' for details.
Running examples in 'ItemResponseTrees-Ex.R' failed
The error most likely occurred in:

> ### Name: augment.irtree_fit
> ### Title: Augment data with information from an irtree_fit object
> ### Aliases: augment.irtree_fit
> 
> ### ** Examples
> 
> data("jackson")
> df1 <- jackson[1:234, paste0("C", 1:5)]
> irtree_create_template(df1)

m1 <- "
Equations:
0 = ...
1 = ...

IRT:
... BY C1@1, C2@1, C3@1, C4@1, C5@1;
... BY C1@1, C2@1, C3@1, C4@1, C5@1;

Class:
Tree
"

> m1 <- "
+ IRT:
+ t BY C1@1, C2@1, C3@1, C4@1, C5@1;
+ Class:
+ GRM"
> fit1 <- fit(irtree_model(m1), data = df1)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: fit ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Running 'spelling.R' [0s]
  Running 'testthat.R' [2s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library("testthat", exclude = "matches")
  > library("ItemResponseTrees")
  > 
  > test_check("ItemResponseTrees")
  Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'ItemResponseTrees-Getting-started-with-IR-trees.Rmd' using rmarkdown
Quitting from lines 112-116 (ItemResponseTrees-Getting-started-with-IR-trees.Rmd) 
Error: processing vignette 'ItemResponseTrees-Getting-started-with-IR-trees.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'ItemResponseTrees-Getting-started-with-IR-trees.Rmd'

SUMMARY: processing the following file failed:
  'ItemResponseTrees-Getting-started-with-IR-trees.Rmd'

Error: Vignette re-building failed.
Execution halted
Depends: includes the non-default packages:
  'partitions', 'VGAM', 'MASS', 'ape', 'apTreeshape', 'geiger',
  'gtools'
Adding so many packages to the search path is excessive and importing
selectively is preferable.
Packages in Depends field not imported from:
  'MASS' 'VGAM' 'apTreeshape' 'ape' 'geiger' 'gtools' 'partitions'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Running examples in 'ITNr-Ex.R' failed
The error most likely occurred in:

> ### Name: core_periphery_weighted
> ### Title: Core-Periphery for Weighted Networks
> ### Aliases: core_periphery_weighted
> 
> ### ** Examples
> 
> require(igraph)
Loading required package: igraph

Attaching package: 'igraph'

The following objects are masked from 'package:network':

    %c%, %s%, add.edges, add.vertices, delete.edges, delete.vertices,
    get.edge.attribute, get.edges, get.vertex.attribute, is.bipartite,
    is.directed, list.edge.attributes, list.vertex.attributes,
    set.edge.attribute, set.vertex.attribute

The following objects are masked from 'package:stats':

    decompose, spectrum

The following object is masked from 'package:base':

    union

> ##Create random International Trade Network (igraph object)
> ITN<-erdos.renyi.game(50,0.05,directed = TRUE)
> 
> ##Add edge weights
> E(ITN)$weight<-runif(ecount(ITN), 0, 1)
> 
> ##Add vertex names
> V(ITN)$name<-1:vcount(ITN)
> 
> ##Implement core-periphery algorithm
> ITNcp<-core_periphery_weighted(ITN,"directed")
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: core_periphery_weighted ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Packages in Depends field not imported from:
  'Matching' 'R2jags' 'boot'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
bpsm: no visible global function definition for 'glm'
bpsm: no visible global function definition for 'binomial'
bpsm: no visible global function definition for 'Match'
bpsm: no visible global function definition for 'cov'
bpsm: no visible global function definition for 'vcov'
bpsm : inits: no visible global function definition for 'runif'
bpsm: no visible global function definition for 'jags'
bpsr: no visible global function definition for 'glm'
bpsr: no visible global function definition for 'binomial'
bpsr: no visible global function definition for 'lm'
bpsr : inits: no visible global function definition for 'runif'
bpsr: no visible global function definition for 'jags'
modelpsm: no visible binding for global variable 'D'
modelpsr: no visible binding for global variable 'D'
Undefined global functions or variables:
  D Match binomial cov glm jags lm runif vcov
Consider adding
  importFrom("stats", "D", "binomial", "cov", "glm", "lm", "runif",
             "vcov")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ivdesc.Rcheck/00install.out' for details.
Package suggested but not available for checking: 'gurobi'
Malformed Description field: should contain one or more complete sentences.
ivFixed.formula: no visible global function definition for
  'model.matrix'
ivFixed.formula: no visible global function definition for
  'model.response'
summary.ivFixed: no visible global function definition for 'coef'
summary.ivFixed: no visible global function definition for 'pt'
Undefined global functions or variables:
  coef model.matrix model.response pt
Consider adding
  importFrom("stats", "coef", "model.matrix", "model.response", "pt")
to your NAMESPACE file.
Packages suggested but not available for checking: 'gurobi', 'cplexAPI'
Malformed Title field: should not end in a period.
ARsensitivity.ci: no visible global function definition for 'residuals'
ARsensitivity.ci: no visible global function definition for 'lm'
ARsensitivity.ci: no visible global function definition for 'qf'
ARsensitivity.ci: no visible global function definition for 'fitted'
ARsensitivity.power: no visible global function definition for 'qf'
ARsensitivity.power: no visible global function definition for 'pf'
ARsensitivity.size: no visible global function definition for 'qf'
ARsensitivity.size: no visible global function definition for 'pf'
anderson.rubin.ci: no visible global function definition for 'qf'
anderson.rubin.ci: no visible global function definition for 'fitted'
anderson.rubin.ci: no visible global function definition for 'lm'
power.iv: no visible global function definition for 'qf'
power.iv: no visible global function definition for 'pf'
Undefined global functions or variables:
  fitted lm pf qf residuals
Consider adding
  importFrom("stats", "fitted", "lm", "pf", "qf", "residuals")
to your NAMESPACE file.
hausman: no visible global function definition for 'pchisq'
ivbe: no visible global function definition for 'cor'
ivbe: no visible global function definition for 'pt'
ivfixed: no visible global function definition for 'cor'
ivfixed: no visible global function definition for 'pt'
ivpan.formula: no visible global function definition for 'model.matrix'
ivpan.formula: no visible global function definition for
  'model.response'
ivrandom: no visible global function definition for 'cor'
ivrandom: no visible global function definition for 'pt'
summary.ivpan: no visible global function definition for 'printCoefmat'
Undefined global functions or variables:
  cor model.matrix model.response pchisq printCoefmat pt
Consider adding
  importFrom("stats", "cor", "model.matrix", "model.response", "pchisq",
             "printCoefmat", "pt")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
histw: no visible global function definition for 'plot.new'
histw: no visible global function definition for 'plot.window'
histw: no visible global function definition for 'axis'
histw: no visible global function definition for 'rect'
histw: no visible global function definition for 'lines'
Undefined global functions or variables:
  axis lines plot.new plot.window rect
Consider adding
  importFrom("graphics", "axis", "lines", "plot.new", "plot.window",
             "rect")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/jabr.Rcheck/00install.out' for details.
installed size is 11.3Mb
  sub-directories of 1Mb or more:
    art_profiles   1.5Mb
    libs           9.1Mb
GNU make is a SystemRequirements.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/jack.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/jackstrap.Rcheck/00install.out' for details.
Error(s) in re-building vignettes:
--- re-building 'JacobiEigen.Rmd' using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Quitting from lines 100-113 (JacobiEigen.Rmd) 
Error: processing vignette 'JacobiEigen.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'JacobiEigen.Rmd'

SUMMARY: processing the following file failed:
  'JacobiEigen.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/JamendoR.Rcheck/00install.out' for details.
boxplot.james: no visible global function definition for 'mtext'
getBestSolutionValues.james : <anonymous>: no visible global function
  definition for 'tail'
isMinimizing: no visible global function definition for 'head'
isMinimizing: no visible global function definition for 'tail'
mergeJAMES.james: no visible global function definition for 'glob2rx'
plotConvergence.james : <anonymous> : <anonymous>: no visible global
  function definition for 'tail'
plotConvergence.james: no visible global function definition for 'tail'
plotConvergence.james: no visible global function definition for 'head'
plotConvergence.james : <anonymous>: no visible global function
  definition for 'tail'
plotConvergence.james: no visible global function definition for
  'matplot'
plotConvergence.james: no visible global function definition for
  'mtext'
summary.james: no visible global function definition for 'sd'
summary.james: no visible global function definition for 'median'
summary.james: no visible global function definition for 'IQR'
Undefined global functions or variables:
  IQR glob2rx head matplot median mtext sd tail
Consider adding
  importFrom("graphics", "matplot", "mtext")
  importFrom("stats", "IQR", "median", "sd")
  importFrom("utils", "glob2rx", "head", "tail")
to your NAMESPACE file.
Running examples in 'janeaustenr-Ex.R' failed
The error most likely occurred in:

> ### Name: austen_books
> ### Title: Tidy data frame of Jane Austen's 6 completed, published novels
> ### Aliases: austen_books
> 
> ### ** Examples
> 
> 
> library(dplyr)
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Running 'testthat.R' [1s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(janeaustenr)
  > 
  > test_check("janeaustenr")
  -- 1. Error: (unknown) (@test_austen_books.R#5)  -------------------------------
  package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::suppressPackageStartupMessages(library(dplyr))
   3. base::library(dplyr)
   4. base::tryCatch(...)
   5. base:::tryCatchList(expr, classes, parentenv, handlers)
   6. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   7. value[[3L]](cond)
  
  == testthat results  ===========================================================
  [ OK: 0 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: (unknown) (@test_austen_books.R#5) 
  
  Error: testthat unit tests failed
  Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/janitor.Rcheck/00install.out' for details.
Malformed Title field: should not end in a period.
Malformed Description field: should contain one or more complete sentences.
Package in Depends field not imported from: 'gtools'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
NB: .First.lib is obsolete and will not be used in R >= 3.0.0

make_template: no visible global function definition for 'invalid'
Undefined global functions or variables:
  invalid
GNU make is a SystemRequirements.
Found the following Makefile(s) with an include directive with a pathname using R_HOME:
  src/jvm-w32/Makefile
Even though not recommended, variable R_HOME may contain spaces.
Makefile directives use space as a separator and there is no portable
way to quote/escape the space in Make rules and directives.  However,
one can and should quote pathnames when passed from Makefile to the
shell, and this can be done specifically when invoking Make recursively.
It is therefore recommended to use the Make '-f' option to include files
in directories specified using R_HOME.  This option can be specified
multiple times to include multiple Makefiles.  Note that 'Makeconf' is
included automatically into top-level makefile of a package.
More information can be found in 'Writing R Extensions'.
powerLongSurv: no visible global function definition for 'qnorm'
powerLongSurv: no visible global function definition for 'pnorm'
Undefined global functions or variables:
  pnorm qnorm
Consider adding
  importFrom("stats", "pnorm", "qnorm")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
BugReports field is not a suitable URL but contains an email address:
   use the Contact field instead
JBTest: no visible global function definition for 'pchisq'
generateSignificance: no visible global function definition for 'pnorm'
packages: no visible global function definition for 'install.packages'
shift: no visible global function definition for 'tail'
shift: no visible global function definition for 'head'
splitBy: no visible global function definition for 'head'
Undefined global functions or variables:
  head install.packages pchisq pnorm tail
Consider adding
  importFrom("stats", "pchisq", "pnorm")
  importFrom("utils", "head", "install.packages", "tail")
to your NAMESPACE file.
RE.ADT: no visible global function definition for 'sd'
RE.ADT: no visible global function definition for 'pnorm'
RE.Johnson: no visible global function definition for 'pnorm'
Undefined global functions or variables:
  pnorm sd
Consider adding
  importFrom("stats", "pnorm", "sd")
to your NAMESPACE file.
Running examples in 'JointAI-Ex.R' failed
The error most likely occurred in:

> ### Name: plot_imp_distr
> ### Title: Plot the distribution of observed and imputed values
> ### Aliases: plot_imp_distr
> 
> ### ** Examples
> 
> mod <- lme_imp(y ~ C1 + c2 + B2 + C2, random = ~ 1 | id, data = longDF,
+                n.iter = 200, monitor_params = c(imps = TRUE), mess = FALSE)
Warning: Using formula(x) is deprecated when x is a character vector of length > 1.
  Consider formula(paste(x, collapse = " ")) instead.
Warning: Using formula(x) is deprecated when x is a character vector of length > 1.
  Consider formula(paste(x, collapse = " ")) instead.
> impDF <- get_MIdat(mod, m = 5)
> plot_imp_distr(impDF, id = "id", ncol = 3)
Error in plot_imp_distr(impDF, id = "id", ncol = 3) : 
  This function requires the package ggpubr to be installed.
Execution halted
PKG_CXXFLAGS set in 'src/Makevars' without any corresponding files
   PKG_CXXFLAGS set in 'src/Makevars.win' without any corresponding files
'library' or 'require' call to 'stats' in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
binteg: no visible global function definition for 'contourLines'
binteg: no visible global function definition for 'approx'
binteg: no visible global function definition for 'par'
plot1: no visible global function definition for 'par'
plot1: no visible global function definition for 'rect'
plot1: no visible global function definition for 'axis'
plot1: no visible global function definition for 'contour'
plot1: no visible global function definition for 'contourLines'
plot1: no visible binding for global variable 'approx'
plot1: no visible global function definition for 'lines'
plot1: no visible global function definition for 'text'
plot2: no visible global function definition for 'abline'
plot2: no visible global function definition for 'lines'
plot2: no visible global function definition for 'legend'
Undefined global functions or variables:
  abline approx axis contour contourLines legend lines par rect text
Consider adding
  importFrom("grDevices", "contourLines")
  importFrom("graphics", "abline", "axis", "contour", "legend", "lines",
             "par", "rect", "text")
  importFrom("stats", "approx")
to your NAMESPACE file.
Packages in Depends field not imported from:
  'Rsolnp' 'dglm'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/journalabbr.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/jpndistrict.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/JQL.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/jrt.Rcheck/00install.out' for details.
Running examples in 'JSmediation-Ex.R' failed
The error most likely occurred in:

> ### Name: add_index.moderated_mediation
> ### Title: add_index method for moderated mediation
> ### Aliases: add_index.moderated_mediation
> 
> ### ** Examples
> 
> ## getting a stage 1 moderated indirect effect index
> ho_et_al$condition_c <- build_contrast(ho_et_al$condition,
+                                        "Low discrimination",
+                                        "High discrimination")
> ho_et_al$linkedfate_c <- scale(ho_et_al$linkedfate, scale = FALSE)
> ho_et_al$sdo_c <- scale(ho_et_al$sdo, scale = FALSE)
> moderated_model <- mdt_moderated(data = ho_et_al,
+                                  IV = condition_c,
+                                  DV = hypodescent,
+                                  M = linkedfate_c,
+                                  Mod = sdo_c)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: mdt_moderated ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'jsmediation.Rmd' using rmarkdown
Quitting from lines 70-75 (jsmediation.Rmd) 
Error: processing vignette 'jsmediation.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'jsmediation.Rmd'

SUMMARY: processing the following file failed:
  'jsmediation.Rmd'

Error: Vignette re-building failed.
Execution halted
sonarCSV: no visible global function definition for 'read.csv'
Undefined global functions or variables:
  read.csv
Consider adding
  importFrom("utils", "read.csv")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/jsonstat.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/jstor.Rcheck/00install.out' for details.
Running examples in 'jtools-Ex.R' failed
The error most likely occurred in:

> ### Name: export_summs
> ### Title: Export regression summaries to tables
> ### Aliases: export_summs
> 
> ### ** Examples
> 
> states <- as.data.frame(state.x77)
> fit1 <- lm(Income ~ Frost, data = states)
> fit2 <- lm(Income ~ Frost + Illiteracy, data = states)
> fit3 <- lm(Income ~ Frost + Illiteracy + Murder, data = states)
> 
> if (requireNamespace("huxtable")) {
+   # Export all 3 regressions with "Model #" labels,
+   # standardized coefficients, and robust standard errors
+   export_summs(fit1, fit2, fit3,
+                model.names = c("Model 1","Model 2","Model 3"),
+                coefs = c("Frost Days" = "Frost",
+                          "% Illiterate" = "Illiteracy",
+                          "Murder Rate" = "Murder"),
+                scale = TRUE, robust = TRUE)
+ }
Loading required namespace: huxtable
Error: Install the broom package to use the export_summs function.
Backtrace:
 1. jtools::export_summs(...)
Execution halted
qtls: no visible global function definition for 'quantile'
qtls: no visible global function definition for 'pnorm'
Undefined global functions or variables:
  pnorm quantile
Consider adding
  importFrom("stats", "pnorm", "quantile")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/jubilee.Rcheck/00install.out' for details.
Package vignette with placeholder title 'Vignette Title':
  'jumptest.Rmd'
Running examples in 'justifier-Ex.R' failed
The error most likely occurred in:

> ### Name: apply_graph_theme
> ### Title: Apply multiple DiagrammeR global graph attributes
> ### Aliases: apply_graph_theme
> 
> ### ** Examples
> 
> exampleJustifier <- '
+ ---
+ assertion:
+   -
+     id: assertion_id
+     label: "An assertion"
+ decision:
+   -
+     id: decision_id
+     label: "A decision"
+     justification:
+       -
+         id: justification_id
+         label: "A justification"
+         assertion:
+           -
+             id: assertion_id
+             description: "A description of an assertion"
+             source:
+               -
+                 id: source1_id
+                 label: "First source"
+               -
+                 id: source2_id
+                 label: "second source"
+ ---
+ ';
> justifications <-
+   load_justifications(text=exampleJustifier);
Warning in value[[3L]](cond) :
  Error issued when converting 'decision_id' decision tree to a decision graph: DLL 'dplyr' not found: maybe not installed for this architecture?

Class and content:

[1] "Node" "R6"  
               levelName
1 decision_id           
2  °--justification_id  
3      °--assertion_id  
4          ¦--source1_id
5          °--source2_id
Error in FUN(X[[i]], ...) : object 'dTreeGraph' not found
Calls: load_justifications -> parse_justifications -> lapply -> FUN
Execution halted
Running 'testthat.R' [3s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > require(testthat);
  Loading required package: testthat
  > testthat::test_check("justifier");
  Loading required package: justifier
  -- 1. Error: reading a directory with justifications works (@test-general-justif
  object 'dTreeGraph' not found
  Backtrace:
   1. justifier::load_justifications_dir(examplePath)
   2. justifier::parse_justifications(justifications)
   3. base::lapply(...)
   4. justifier:::FUN(X[[i]], ...)
  
  -- 2. Error: parsing justifications works (@test-general-justifier-tests.R#36)  
  object 'dTreeGraph' not found
  Backtrace:
   1. justifier::load_justifications(file.path(examplePath, "pp19.1-target-behavior-selection.jmd"))
   2. justifier::parse_justifications(justifications)
   3. base::lapply(...)
   4. justifier:::FUN(X[[i]], ...)
  
  -- 3. Error: parsing simplified, just extracted justifications from yum works (@
  object 'dTreeGraph' not found
  Backtrace:
   1. justifier::parse_justifications(res1)
   2. base::lapply(...)
   3. justifier:::FUN(X[[i]], ...)
  
  -- 4. Error: the intervention development justification from the vignette is par
  object 'dTreeGraph' not found
  Backtrace:
   1. justifier::parse_justifications(res1)
   2. base::lapply(...)
   3. justifier:::FUN(X[[i]], ...)
  
  == testthat results  ===========================================================
  [ OK: 2 | SKIPPED: 0 | WARNINGS: 4 | FAILED: 4 ]
  1. Error: reading a directory with justifications works (@test-general-justifier-tests.R#24) 
  2. Error: parsing justifications works (@test-general-justifier-tests.R#36) 
  3. Error: parsing simplified, just extracted justifications from yum works (@test-general-justifier-tests.R#67) 
  4. Error: the intervention development justification from the vignette is parsed correctly (@test-general-justifier-tests.R#91) 
  
  Error: testthat unit tests failed
  Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/JWileymisc.Rcheck/00install.out' for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for 'kangar00' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
expression_up : <anonymous>: no visible global function definition for
  'quantile'
expression_up : <anonymous>: no visible global function definition for
  'IQR'
expression_up : <anonymous>: no visible global function definition for
  'median'
expression_up : <anonymous>: no visible global function definition for
  'sd'
plot_up: no visible global function definition for 'text'
Undefined global functions or variables:
  IQR median quantile sd text
Consider adding
  importFrom("graphics", "text")
  importFrom("stats", "IQR", "median", "quantile", "sd")
to your NAMESPACE file.
Malformed Title field: should not end in a period.
KappaV: no visible global function definition for 'over'
KappaV: no visible global function definition for 'layout'
KappaV: no visible global function definition for 'terrain.colors'
KappaV: no visible global function definition for 'as'
Undefined global functions or variables:
  as layout over terrain.colors
Consider adding
  importFrom("grDevices", "terrain.colors")
  importFrom("graphics", "layout")
  importFrom("methods", "as")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/kayadata.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
ikcirt.fun.mss.eta: no visible global function definition for 'var'
ikcirt.fun.mss.eta: no visible global function definition for 'pnorm'
ikcirt.fun.mss.lambda: no visible global function definition for 'var'
ikcirt.fun.mss.lambda: no visible global function definition for
  'pnorm'
ikcirt.fun.mss.mu: no visible global function definition for 'pnorm'
kcirt.fitEE: no visible binding for global variable 'sd'
kcirt.fitEE: no visible global function definition for 'var'
kcirt.fitEE: no visible global function definition for 'cor'
kcirt.fitMSS: no visible global function definition for 'var'
kcirt.fitMSS: no visible global function definition for 'pnorm'
kcirt.fitMSS: no visible global function definition for 'sfInit'
kcirt.fitMSS: no visible global function definition for 'sfExport'
kcirt.fitMSS: no visible global function definition for 'rnorm'
kcirt.fitMSS: no visible global function definition for
  'txtProgressBar'
kcirt.fitMSS: no visible global function definition for 'sfIsRunning'
kcirt.fitMSS: no visible global function definition for 'sfStop'
kcirt.fitMSS: no visible global function definition for 'cor'
Undefined global functions or variables:
  cor pnorm rnorm sd sfExport sfInit sfIsRunning sfStop txtProgressBar
  var
Consider adding
  importFrom("stats", "cor", "pnorm", "rnorm", "sd", "var")
  importFrom("utils", "txtProgressBar")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/KCSKNNShiny.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/KCSNBShiny.Rcheck/00install.out' for details.
as.matrix.multiPhylo : tip2tip: no visible global function definition
  for 'cophenetic'
bw.nn : <anonymous>: no visible global function definition for
  'quantile'
dist.diss: no visible binding for global variable 'median'
dist.diss: no visible global function definition for 'dist'
hist.kdetrees: no visible binding for global variable 'density'
kdetrees : cutoff: no visible global function definition for 'quantile'
kdetrees.complete: no visible global function definition for 'hist'
kdetrees.complete: no visible global function definition for
  'write.csv'
plot.kdetrees: no visible binding for global variable 'density'
Undefined global functions or variables:
  cophenetic density dist hist median quantile write.csv
Consider adding
  importFrom("graphics", "hist")
  importFrom("stats", "cophenetic", "density", "dist", "median",
             "quantile")
  importFrom("utils", "write.csv")
to your NAMESPACE file.
installed size is  5.3Mb
  sub-directories of 1Mb or more:
    libs   4.0Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/kendallRandomWalks.Rcheck/00install.out' for details.
SeasonalMannKendall: no visible global function definition for 'is.ts'
SeasonalMannKendall: no visible global function definition for
  'frequency'
SeasonalMannKendall: no visible global function definition for 'cycle'
SeasonalMannKendall: no visible global function definition for 'pnorm'
Undefined global functions or variables:
  cycle frequency is.ts pnorm
Consider adding
  importFrom("stats", "cycle", "frequency", "is.ts", "pnorm")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/kerastuneR.Rcheck/00install.out' for details.
Malformed Title field: should not end in a period.
Checking should be performed on sources prepared by 'R CMD build'.
Packages in Depends field not imported from:
  'chron' 'date' 'evir'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
ALbw: no visible global function definition for 'sd'
ALbw: no visible global function definition for 'quantile'
CVbw: no visible global function definition for 'quantile'
PBbw: no visible global function definition for 'sd'
PBbw: no visible global function definition for 'IQR'
kernel_function: no visible global function definition for 'dnorm'
kernel_function_distribution: no visible global function definition for
  'pnorm'
simp_int: no visible global function definition for 'approx'
Undefined global functions or variables:
  IQR approx dnorm pnorm quantile sd
Consider adding
  importFrom("stats", "IQR", "approx", "dnorm", "pnorm", "quantile",
             "sd")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/keyholder.Rcheck/00install.out' for details.
kissmigDummyS: no visible global function definition for 'dnorm'
Undefined global functions or variables:
  dnorm
Consider adding
  importFrom("stats", "dnorm")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/klaR.Rcheck/00install.out' for details.
Package which this enhances but not available for checking: 'rkward'
distrct.analysis : <anonymous> : <anonymous>: no visible global
  function definition for 'cor'
grand.table: no visible global function definition for 'write.csv2'
grand.table: no visible global function definition for 'write.csv'
klausur: no visible global function definition for 'sd'
klausur: no visible global function definition for 'na.omit'
klausur.gen.marks : suggestion : <anonymous>: no visible global
  function definition for 'qnorm'
klausur.mufo: no visible global function definition for 'sd'
klausur.report: no visible global function definition for 'dev.off'
klausur.report : tabellenbau: no visible global function definition for
  'capture.output'
plot,klausuR-missing: no visible global function definition for
  'na.omit'
plot,klausuR-missing: no visible global function definition for 'sd'
plot,klausuR-missing : <anonymous>: no visible global function
  definition for 'dnorm'
Undefined global functions or variables:
  capture.output cor dev.off dnorm na.omit qnorm sd write.csv
  write.csv2
Consider adding
  importFrom("grDevices", "dev.off")
  importFrom("stats", "cor", "dnorm", "na.omit", "qnorm", "sd")
  importFrom("utils", "capture.output", "write.csv", "write.csv2")
to your NAMESPACE file.
Package in Depends field not imported from: 'survival'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
comp.npci: no visible global function definition for 'qnorm'
epband.fun: no visible global function definition for 'data'
epband.fun: no visible binding for global variable
  'critical.value.nair.90'
epband.fun: no visible binding for global variable
  'critical.value.nair.95'
epband.fun: no visible binding for global variable
  'critical.value.nair.99'
hall.wellner.fun: no visible global function definition for 'data'
hall.wellner.fun: no visible binding for global variable
  'critical.value.hall.90'
hall.wellner.fun: no visible binding for global variable
  'critical.value.hall.95'
hall.wellner.fun: no visible binding for global variable
  'critical.value.hall.99'
lrt.confints: no visible global function definition for 'qchisq'
rothman.fun: no visible global function definition for 'qnorm'
Undefined global functions or variables:
  critical.value.hall.90 critical.value.hall.95 critical.value.hall.99
  critical.value.nair.90 critical.value.nair.95 critical.value.nair.99
  data qchisq qnorm
Consider adding
  importFrom("stats", "qchisq", "qnorm")
  importFrom("utils", "data")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
noe.compute.pv: no visible global function definition for 'punif'
Undefined global functions or variables:
  punif
Consider adding
  importFrom("stats", "punif")
to your NAMESPACE file.
dscore: no visible global function definition for 'glm'
dscore: no visible binding for global variable 'binomial'
dscore: no visible global function definition for 'pnorm'
pearson.group: no visible global function definition for 'cor'
spearman.group: no visible global function definition for 'cor'
sscore: no visible global function definition for 'glm'
sscore: no visible binding for global variable 'binomial'
sscore: no visible global function definition for 'pnorm'
Undefined global functions or variables:
  binomial cor glm pnorm
Consider adding
  importFrom("stats", "binomial", "cor", "glm", "pnorm")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/kmeRs.Rcheck/00install.out' for details.
Warning: no function found corresponding to methods exports from 'kmlcov' for: 'show'

A namespace must be able to be loaded with just the base namespace
loaded: otherwise if the namespace gets loaded by a saved object, the
session will be unable to start.

Probably some imports need to be declared in the NAMESPACE file.
Package in Depends field not imported from: 'methods'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
C_zero : <anonymous>: no visible global function definition for 'runif'
get_extra_centroid_index: no visible global function definition for
  'head'
get_within_cluster_ss: no visible global function definition for
  'aggregate'
kmod: no visible global function definition for 'head'
kmod: no visible global function definition for 'tail'
Undefined global functions or variables:
  aggregate head runif tail
Consider adding
  importFrom("stats", "aggregate", "runif")
  importFrom("utils", "head", "tail")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/KMunicate.Rcheck/00install.out' for details.
benchmark.patchwork.copula : <anonymous> : <anonymous>: no visible
  global function definition for 'rbeta'
benchmark.patchwork.copula : <anonymous> : <anonymous>: no visible
  global function definition for 'runif'
calculate.power : <anonymous>: no visible binding for global variable
  'quantile'
generate.benchmark.data: no visible global function definition for
  'runif'
generate.benchmark.data: no visible global function definition for
  'rnorm'
generate.benchmark.data: no visible global function definition for
  'rbinom'
generate.patchwork.copula: no visible global function definition for
  'rbeta'
generate.patchwork.copula: no visible global function definition for
  'runif'
novelTest.chisq: no visible global function definition for 'pchisq'
novelTest.chisq4nn: no visible global function definition for 'pchisq'
optimise.copula.mi : <anonymous>: no visible global function definition
  for 'optimize'
power.plot: no visible global function definition for 'axis'
power.plot : <anonymous>: no visible global function definition for
  'points'
power.plot: no visible global function definition for 'legend'
roc.plot: no visible global function definition for 'colorRampPalette'
roc.plot : <anonymous> : <anonymous>: no visible global function
  definition for 'points'
run.tests : <anonymous> : <anonymous>: no visible global function
  definition for 'runif'
Undefined global functions or variables:
  axis colorRampPalette legend optimize pchisq points quantile rbeta
  rbinom rnorm runif
Consider adding
  importFrom("grDevices", "colorRampPalette")
  importFrom("graphics", "axis", "legend", "points")
  importFrom("stats", "optimize", "pchisq", "quantile", "rbeta",
             "rbinom", "rnorm", "runif")
to your NAMESPACE file.
Package suggested but not available for checking: 'doMC'
GNU make is a SystemRequirements.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/kntnr.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/kokudosuuchi.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/konfound.Rcheck/00install.out' for details.
Packages suggested but not available for checking:
  'koRpus.lang.de', 'koRpus.lang.es', 'koRpus.lang.fr',
  'koRpus.lang.it', 'koRpus.lang.ru'

Package which this enhances but not available for checking: 'rkward'
Running examples in 'KraljicMatrix-Ex.R' failed
The error most likely occurred in:

> ### Name: kraljic_matrix
> ### Title: Kraljic matrix plotting function
> ### Aliases: kraljic_matrix
> 
> ### ** Examples
> 
> 
> # Given the following \code{x} and \code{y} attribute values we can plot each
> # product or service in the purchasing matrix:
> 
> # to add a new variable while preserving existing data
> library(dplyr)
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Running 'testthat.R' [3s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(KraljicMatrix)
  > 
  > test_check("KraljicMatrix")
  -- 1. Error: (unknown) (@test_kraljic_matrix.R#7)  -----------------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    9. dplyr::mutate(...)
   10. base::getExportedValue(pkg, name)
   11. base::asNamespace(ns)
   12. base::getNamespace(ns)
   13. base::loadNamespace(name)
   14. base::library.dynam(lib, package, package.lib)
  
  -- 2. Error: (unknown) (@test_kraljic_quadrant.R#7)  ---------------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    9. dplyr::mutate(...)
   10. base::getExportedValue(pkg, name)
   11. base::asNamespace(ns)
   12. base::getNamespace(ns)
   13. base::loadNamespace(name)
   14. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 38 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 2 ]
  1. Error: (unknown) (@test_kraljic_matrix.R#7) 
  2. Error: (unknown) (@test_kraljic_quadrant.R#7) 
  
  Error: testthat unit tests failed
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'kraljic.Rmd' using rmarkdown
Quitting from lines 223-233 (kraljic.Rmd) 
Error: processing vignette 'kraljic.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'kraljic.Rmd'

SUMMARY: processing the following file failed:
  'kraljic.Rmd'

Error: Vignette re-building failed.
Execution halted
Malformed Description field: should contain one or more complete sentences.
image.kriging: no visible global function definition for 'heat.colors'
image.kriging: no visible global function definition for 'image'
kriging: no visible global function definition for 'lm'
plot.kriging: no visible global function definition for 'curve'
Undefined global functions or variables:
  curve heat.colors image lm
Consider adding
  importFrom("grDevices", "heat.colors")
  importFrom("graphics", "curve", "image")
  importFrom("stats", "lm")
to your NAMESPACE file.
kselection: no visible global function definition for 'txtProgressBar'
kselection: no visible global function definition for
  'setTxtProgressBar'
plot.Kselection: no visible global function definition for 'lines'
plot.Kselection: no visible global function definition for 'legend'
Undefined global functions or variables:
  legend lines setTxtProgressBar txtProgressBar
Consider adding
  importFrom("graphics", "legend", "lines")
  importFrom("utils", "setTxtProgressBar", "txtProgressBar")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ktaucenters.Rcheck/00install.out' for details.
Found the following hidden files and directories:
  .Rbuildindex.10034
  .Rbuildindex.31551
  .Rbuildindex.31678
  .Rbuildindex.9995
  inst/doc/.fr-hy2VZf
These were most likely included in error. See section 'Package
structure' in the 'Writing R Extensions' manual.
Package in Depends field not imported from: 'Biobase'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
S3 methods shown with full name in documentation object 'predict.ktsp':
  'predict.ktsp'

S3 methods shown with full name in documentation object 'print.ktsp':
  'print.ktsp'

S3 methods shown with full name in documentation object 'summary.ktsp':
  'summary.ktsp'

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.
Malformed Description field: should contain one or more complete sentences.
'library' or 'require' call to 'XML' in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
auc: no visible global function definition for 'approx'
kulife.colors: no visible global function definition for 'palette'
rootonorm: no visible global function definition for 'sd'
rootonorm: no visible global function definition for 'hist'
rootonorm: no visible global function definition for 'pnorm'
rootonorm: no visible global function definition for 'dnorm'
rootonorm: no visible global function definition for 'rect'
rootonorm: no visible global function definition for 'lines'
rootonorm: no visible global function definition for 'abline'
Undefined global functions or variables:
  abline approx dnorm hist lines palette pnorm rect sd
Consider adding
  importFrom("grDevices", "palette")
  importFrom("graphics", "abline", "hist", "lines", "rect")
  importFrom("stats", "approx", "dnorm", "pnorm", "sd")
to your NAMESPACE file.
Running examples in 'kuniezu-Ex.R' failed
The error most likely occurred in:

> ### Name: GeomJpSegment
> ### Title: Drawing a segment line segment that shows the boundary
> ### Aliases: GeomJpSegment geom_jpsegment
> ### Keywords: datasets
> 
> ### ** Examples
> 
> require("ggplot2")
Loading required package: ggplot2
> require("sf")
Loading required package: sf
Linking to GEOS 3.8.0, GDAL 3.0.4, PROJ 6.3.1
> move_jpn_rs(jgd2011_bbox) %>%
+   ggplot() +
+   geom_sf() +
+   geom_jpsegment()
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: %>% ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Running 'testthat.R' [3s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(kuniezu)
  > 
  > test_check("kuniezu")
  -- 1. Error: multiplication works (@test-move_jpn_rs.R#2)  ---------------------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. kuniezu::move_jpn_rs(jgd2011_bbox)
   10. dplyr::mutate(., .row_num = dplyr::row_number())
   11. base::getExportedValue(pkg, name)
   12. base::asNamespace(ns)
   13. base::getNamespace(ns)
   14. base::loadNamespace(name)
   15. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 14 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: multiplication works (@test-move_jpn_rs.R#2) 
  
  Error: testthat unit tests failed
  Execution halted
Malformed Description field: should contain one or more complete sentences.
kztp: warning in rowMeans(kztp, dim = 2): partial argument match of
  'dim' to 'dims'
installed size is  5.9Mb
  sub-directories of 1Mb or more:
    doc    2.4Mb
    libs   3.4Mb
Found the following hidden files and directories:
  .Rapp.history
These were most likely included in error. See section 'Package
structure' in the 'Writing R Extensions' manual.
Malformed Description field: should contain one or more complete sentences.
Malformed Description field: should contain one or more complete sentences.
extended.figures: no visible global function definition for 'par'
extended.figures: no visible global function definition for 'runif'
extended.figures : figure2: no visible global function definition for
  'hist'
extended.figures : figure2: no visible global function definition for
  'axis'
extended.figures : figure3 : <anonymous>: no visible global function
  definition for 'median'
extended.figures : figure3: no visible global function definition for
  'barplot'
Undefined global functions or variables:
  axis barplot hist median par runif
Consider adding
  importFrom("graphics", "axis", "barplot", "hist", "par")
  importFrom("stats", "median", "runif")
to your NAMESPACE file.
Package vignette with placeholder title 'Vignette Title':
  'labelrank.Rmd'
Malformed Title field: should not end in a period.
LDuncan.aov : prob: no visible global function definition for 'qtukey'
LDuncan.aov: no visible global function definition for 'qtukey'
LScottKnott.aov : sk: no visible global function definition for
  'pchisq'
LScottKnott.aov: no visible global function definition for 'read.table'
LTukey.aov: no visible global function definition for 'qtukey'
Undefined global functions or variables:
  pchisq qtukey read.table
Consider adding
  importFrom("stats", "pchisq", "qtukey")
  importFrom("utils", "read.table")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/LAGOSNE.Rcheck/00install.out' for details.
installed size is  8.3Mb
  sub-directories of 1Mb or more:
    data   8.2Mb
installed size is  9.4Mb
  sub-directories of 1Mb or more:
    data   8.9Mb
Running examples in 'Lahman-Ex.R' failed
The error most likely occurred in:

> ### Name: Appearances
> ### Title: Appearances table
> ### Aliases: Appearances
> ### Keywords: datasets
> 
> ### ** Examples
> 
> data(Appearances)
> library("dplyr")
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Error(s) in re-building vignettes:
--- re-building 'hits-by-type.Rmd' using rmarkdown
Quitting from lines 35-38 (hits-by-type.Rmd) 
Error: processing vignette 'hits-by-type.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'hits-by-type.Rmd'

--- re-building 'payroll.Rmd' using rmarkdown
Quitting from lines 31-34 (payroll.Rmd) 
Error: processing vignette 'payroll.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'payroll.Rmd'

--- re-building 'run-scoring-trends.Rmd' using rmarkdown
Quitting from lines 21-27 (run-scoring-trends.Rmd) 
Error: processing vignette 'run-scoring-trends.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'run-scoring-trends.Rmd'

--- re-building 'strikeoutsandhr.Rmd' using rmarkdown
Quitting from lines 29-33 (strikeoutsandhr.Rmd) 
Error: processing vignette 'strikeoutsandhr.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'strikeoutsandhr.Rmd'

--- re-building 'vignette-intro.Rmd' using rmarkdown
--- finished re-building 'vignette-intro.Rmd'

SUMMARY: processing the following files failed:
  'hits-by-type.Rmd' 'payroll.Rmd' 'run-scoring-trends.Rmd'
  'strikeoutsandhr.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/laketemps.Rcheck/00install.out' for details.
Malformed Title field: should not end in a period.
'library' or 'require' calls in package code:
  'GPArotation' 'mice'
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
angoff: no visible global function definition for 'cov2cor'
angoff: no visible global function definition for 'runif'
cov.lambda4: no visible global function definition for 'cov2cor'
cov.lambda4: no visible global function definition for 'median'
guttman: no visible global function definition for 'cov2cor'
impute.cov: no visible global function definition for 'cov'
impute.cov: no visible global function definition for 'complete'
impute.cov: no visible global function definition for 'mice'
kristof: no visible global function definition for 'cov2cor'
kristof: no visible global function definition for 'runif'
lambda1: no visible global function definition for 'cov2cor'
lambda2: no visible global function definition for 'cov2cor'
lambda3: no visible global function definition for 'cov2cor'
lambda3: no visible binding for global variable 'sd'
lambda5: no visible global function definition for 'cov2cor'
lambda6: no visible global function definition for 'cov2cor'
omega.tot: no visible global function definition for 'cov2cor'
omega.tot: no visible global function definition for 'factanal'
quant.lambda4: no visible global function definition for 'cov2cor'
quant.lambda4: no visible global function definition for 'runif'
quant.lambda4: no visible global function definition for 'quantile'
raju: no visible global function definition for 'cov2cor'
raju: no visible global function definition for 'runif'
user.lambda4: no visible global function definition for 'runif'
user.lambda4: no visible binding for global variable 'sd'
Undefined global functions or variables:
  complete cov cov2cor factanal median mice quantile runif sd
Consider adding
  importFrom("stats", "cov", "cov2cor", "factanal", "median", "quantile",
             "runif", "sd")
to your NAMESPACE file.
GNU make is a SystemRequirements.
getGO: no visible global function definition for 'new'
getGO: no visible global function definition for 'getGeneric'
graph.kd: no visible global function definition for 'as'
Undefined global functions or variables:
  as getGeneric new
Consider adding
  importFrom("methods", "as", "getGeneric", "new")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Kern.FUN: no visible global function definition for 'dnorm'
Prob.Covariate.ShortEvent: no visible global function definition for
  'bw.nrd'
optimize.mse.BW: no visible global function definition for 'optimize'
Undefined global functions or variables:
  bw.nrd dnorm optimize
Consider adding
  importFrom("stats", "bw.nrd", "dnorm", "optimize")
to your NAMESPACE file.
Error(s) in re-building vignettes:
--- re-building 'getstarted.Rmd' using rmarkdown
Loading required package: sp
Quitting from lines 23-26 (getstarted.Rmd) 
Error: processing vignette 'getstarted.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'getstarted.Rmd'

SUMMARY: processing the following file failed:
  'getstarted.Rmd'

Error: Vignette re-building failed.
Execution halted
installed size is  5.3Mb
  sub-directories of 1Mb or more:
    libs   3.1Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/lans2r.Rcheck/00install.out' for details.
installed size is  5.2Mb
  sub-directories of 1Mb or more:
    R      1.5Mb
    doc    2.0Mb
    help   1.1Mb
betabreaker: no visible global function definition for 'predict'
coef.lars: no visible global function definition for 'predict'
cv.lars: no visible global function definition for 'predict'
cv.lars: no visible binding for global variable 'var'
error.bars: no visible global function definition for 'segments'
plot.lars: no visible global function definition for 'matplot'
plot.lars: no visible global function definition for 'title'
plot.lars: no visible global function definition for 'abline'
plot.lars: no visible global function definition for 'axis'
predict.lars: no visible global function definition for 'approx'
Undefined global functions or variables:
  abline approx axis matplot predict segments title var
Consider adding
  importFrom("graphics", "abline", "axis", "matplot", "segments",
             "title")
  importFrom("stats", "approx", "predict", "var")
to your NAMESPACE file.
Package suggested but not available for checking: 'covTest'
glassoscore: no visible global function definition for 'var'
glassoscore: no visible global function definition for 'pchisq'
lassoscore: no visible global function definition for 'txtProgressBar'
lassoscore: no visible global function definition for
  'setTxtProgressBar'
lassoscore: no visible global function definition for 'pchisq'
plot.glassoscore: no visible global function definition for 'legend'
plot.lassoscore: no visible global function definition for 'legend'
plot.mbscore: no visible global function definition for 'legend'
qqpval: no visible global function definition for 'ppoints'
qqpval: no visible global function definition for 'qbeta'
qqpval: no visible global function definition for 'points'
qqpval: no visible global function definition for 'abline'
qqpval: no visible global function definition for 'polygon'
Undefined global functions or variables:
  abline legend pchisq points polygon ppoints qbeta setTxtProgressBar
  txtProgressBar var
Consider adding
  importFrom("graphics", "abline", "legend", "points", "polygon")
  importFrom("stats", "pchisq", "ppoints", "qbeta", "var")
  importFrom("utils", "setTxtProgressBar", "txtProgressBar")
to your NAMESPACE file.
File
  LICENSE
is not mentioned in the DESCRIPTION file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/latentnet.Rcheck/00install.out' for details.
Package vignette with placeholder title 'Vignette Title':
  'using-latex2exp.Rmd'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/latte.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/lattice.Rcheck/00install.out' for details.
installed size is  5.0Mb
  sub-directories of 1Mb or more:
    doc   4.9Mb
Running examples in 'lax-Ex.R' failed
The error most likely occurred in:

> ### Name: POT
> ### Title: Loglikelihood adjustment for POT fits
> ### Aliases: POT alogLik.uvpot
> 
> ### ** Examples
> 
> # We need the POT package
> got_POT <- requireNamespace("POT", quietly = TRUE)
> 
> if (got_POT) {
+   library(POT)
+   # An example from the POT::fitgpd documentation.
+   set.seed(4082019)
+   x <- POT::rgpd(200, 1, 2, 0.25)
+   fit <- fitgpd(x, 1, "mle")
+   adj_fit <- alogLik(fit)
+ }
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: alogLik ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'lax-vignette.Rmd' using rmarkdown
Quitting from lines 46-54 (lax-vignette.Rmd) 
Error: processing vignette 'lax-vignette.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'lax-vignette.Rmd'

SUMMARY: processing the following file failed:
  'lax-vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'lazytrade-Ex.R' failed
The error most likely occurred in:

> ### Name: aml_collect_data
> ### Title: Function to read new data, transform data, save data for further
> ###   retraining of regression model for a single currency pair
> ### Aliases: aml_collect_data
> 
> ### ** Examples
> 
> 
> # write examples for the function
> library(dplyr)
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
plotcorr.lba.3d: warning in pch3d(colcoordi[, dim], pch = pch.budget,
  col = col.budget, ...): partial argument match of 'col' to 'color'
lbfgs: no visible global function definition for 'hasArg'
Undefined global functions or variables:
  hasArg
Consider adding
  importFrom("methods", "hasArg")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Malformed Title field: should not end in a period.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/LBSPR.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
cclcda.default: no visible global function definition for 'as.formula'
cclcda.default: no visible global function definition for 'chisq.test'
cclcda.formula: no visible global function definition for 'model.frame'
cclcda2.default: no visible global function definition for 'runif'
cclcda2.default: no visible global function definition for 'chisq.test'
cclcda2.formula: no visible global function definition for
  'model.frame'
lcda.default: no visible global function definition for 'as.formula'
lcda.formula: no visible global function definition for 'model.frame'
Undefined global functions or variables:
  as.formula chisq.test model.frame runif
Consider adding
  importFrom("stats", "as.formula", "chisq.test", "model.frame", "runif")
to your NAMESPACE file.
installed size is  5.0Mb
  sub-directories of 1Mb or more:
    R      1.1Mb
    libs   2.6Mb
Running examples in 'lcsm-Ex.R' failed
The error most likely occurred in:

> ### Name: extract_param
> ### Title: Extract labelled parameters of lavaan objects
> ### Aliases: extract_param
> 
> ### ** Examples
> 
> # First create a lavaan object
> bi_lcsm_01 <- fit_bi_lcsm(data = data_bi_lcsm, 
+                           var_x = names(data_bi_lcsm)[2:4], 
+                           var_y = names(data_bi_lcsm)[12:14],
+                           model_x = list(alpha_constant = TRUE, 
+                                          beta = TRUE, 
+                                          phi = FALSE),
+                           model_y = list(alpha_constant = TRUE, 
+                                          beta = TRUE, 
+                                          phi = TRUE),
+                           coupling = list(delta_lag_xy = TRUE, 
+                                           xi_lag_yx = TRUE)
+                                           )
Warning in lav_model_vcov(lavmodel = lavmodel, lavsamplestats = lavsamplestats,  :
  lavaan WARNING:
    The variance-covariance matrix of the estimated parameters (vcov)
    does not appear to be positive definite! The smallest eigenvalue
    (= 4.441205e-15) is close to zero. This may be a symptom that the
    model is not identified.
> 
> # Now extract parameter estimates              
> extract_param(bi_lcsm_01)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: extract_param ... loadNamespace -> namespaceImport -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'v0-longitudinal-plots.Rmd' using rmarkdown
Quitting from lines 20-26 (v0-longitudinal-plots.Rmd) 
Error: processing vignette 'v0-longitudinal-plots.Rmd' failed with diagnostics:
package or namespace load failed for 'tidyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'v0-longitudinal-plots.Rmd'

--- re-building 'v1-lavaan-syntax.Rmd' using rmarkdown
--- finished re-building 'v1-lavaan-syntax.Rmd'

--- re-building 'v2-path-diagrams.Rmd' using rmarkdown
Quitting from lines 47-70 (v2-path-diagrams.Rmd) 
Error: processing vignette 'v2-path-diagrams.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'v2-path-diagrams.Rmd'

--- re-building 'v3-extract-tutorial.Rmd' using rmarkdown
Quitting from lines 61-69 (v3-extract-tutorial.Rmd) 
Error: processing vignette 'v3-extract-tutorial.Rmd' failed with diagnostics:
`map_df()` requires dplyr
--- failed re-building 'v3-extract-tutorial.Rmd'

--- re-building 'v4-simulate-data.Rmd' using rmarkdown
Quitting from lines 25-38 (v4-simulate-data.Rmd) 
Error: processing vignette 'v4-simulate-data.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'v4-simulate-data.Rmd'

SUMMARY: processing the following files failed:
  'v0-longitudinal-plots.Rmd' 'v2-path-diagrams.Rmd'
  'v3-extract-tutorial.Rmd' 'v4-simulate-data.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/lctools.Rcheck/00install.out' for details.
Package suggested but not available for checking: 'doMC'
Malformed Title field: should not end in a period.
multistart : <anonymous>: no visible global function definition for
  'runif'
plot.FreD.x: no visible global function definition for 'modifyList'
plot.FreD.x: no visible global function definition for 'abline'
plot.FreD.x: no visible global function definition for 'points'
Undefined global functions or variables:
  abline modifyList points runif
Consider adding
  importFrom("graphics", "abline", "points")
  importFrom("stats", "runif")
  importFrom("utils", "modifyList")
to your NAMESPACE file.
ARConfIntEst: no visible global function definition for 'sd'
PTLinkFunc: no visible global function definition for 'pnorm'
PTLinkFunc: no visible global function definition for 'qnorm'
PTMultiPeriodPD: no visible global function definition for 'uniroot'
PTOnePeriodPD : f: no visible global function definition for 'pbinom'
PTOnePeriodPD: no visible global function definition for 'uniroot'
QMMGetRLogitPD: no visible global function definition for 'ecdf'
QMMPDlinkFunc: no visible global function definition for 'qnorm'
QMMPlot: no visible global function definition for 'lines'
QMMPlot: no visible global function definition for 'legend'
VDBCalibratePD: no visible global function definition for 'ecdf'
VDBGetK: no visible global function definition for 'uniroot'
Undefined global functions or variables:
  ecdf legend lines pbinom pnorm qnorm sd uniroot
Consider adding
  importFrom("graphics", "legend", "lines")
  importFrom("stats", "ecdf", "pbinom", "pnorm", "qnorm", "sd",
             "uniroot")
to your NAMESPACE file.
core: no visible global function definition for 'cov'
lad: no visible global function definition for 'cov'
lad : InitialMatrix: no visible global function definition for 'cov'
pfc : onepfc: no visible global function definition for 'as.formula'
pfc : onepfc: no visible global function definition for 'lm'
pfc: no visible global function definition for 'cov'
pfc : aniso: no visible global function definition for 'cov'
plot.lad: no visible global function definition for 'lines'
plot.lad: no visible global function definition for 'lowess'
plot.lad: no visible global function definition for 'title'
plot.lad: no visible global function definition for 'par'
plot.lad: no visible global function definition for 'legend'
plot.pfc: no visible global function definition for 'lines'
plot.pfc: no visible global function definition for 'lowess'
plot.pfc: no visible global function definition for 'title'
plot.pfc: no visible global function definition for 'par'
plot.pfc: no visible global function definition for 'legend'
screen.pfc : unipfc: no visible global function definition for
  'as.formula'
screen.pfc : unipfc: no visible global function definition for 'lm'
screen.pfc : unipfc: no visible global function definition for 'pf'
structure.test: no visible global function definition for 'pchisq'
summary.core : lrtest: no visible global function definition for
  'pchisq'
summary.lad : lrtest: no visible global function definition for
  'pchisq'
summary.pfc : lrtest: no visible global function definition for
  'pchisq'
summary.pfc : r2: no visible global function definition for 'lm'
Undefined global functions or variables:
  as.formula cov legend lines lm lowess par pchisq pf title
Consider adding
  importFrom("graphics", "legend", "lines", "par", "title")
  importFrom("stats", "as.formula", "cov", "lm", "lowess", "pchisq",
             "pf")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
prepare_Rd: HWE2sided.Rd:15-16: Dropping empty section \details
prepare_Rd: HWE2sided.table.Rd:17-18: Dropping empty section \details
prepare_Rd: LD2sided.pvals.Rd:13-14: Dropping empty section \details
installed size is 12.2Mb
  sub-directories of 1Mb or more:
    geojson  12.1Mb
Error(s) in re-building vignettes:
--- re-building 'introduction.Rmd' using rmarkdown
Quitting from lines 37-51 (introduction.Rmd) 
Error: processing vignette 'introduction.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'introduction.Rmd'

SUMMARY: processing the following file failed:
  'introduction.Rmd'

Error: Vignette re-building failed.
Execution halted
Package suggested but not available for checking: 'doMC'
BEAPFrOG: no visible global function definition for 'jags.model'
BEAPFrOG: no visible global function definition for 'coda.samples'
LEAPFrOG_EM: no visible global function definition for 'write.table'
LEAPFrOG_EM: no visible global function definition for 'constrOptim'
LEAPFrOG_plot: no visible global function definition for 'par'
LEAPFrOG_plot: no visible global function definition for 'barplot'
LEAPFrOG_plot: no visible global function definition for 'legend'
constrOptim2: no visible global function definition for 'optim'
Undefined global functions or variables:
  barplot coda.samples constrOptim jags.model legend optim par
  write.table
Consider adding
  importFrom("graphics", "barplot", "legend", "par")
  importFrom("stats", "constrOptim", "optim")
  importFrom("utils", "write.table")
to your NAMESPACE file.
AlternateSVD: no visible binding for global variable 'sd'
IPOD: no visible global function definition for 'mad'
IPOD: no visible global function definition for 'pnorm'
Pvalue: no visible global function definition for 'pf'
ROCplot: no visible global function definition for 'png'
ROCplot: no visible global function definition for 'matplot'
ROCplot: no visible global function definition for 'legend'
ROCplot: no visible global function definition for 'dev.off'
leapp: no visible global function definition for 'png'
leapp: no visible global function definition for 'dev.off'
ridge: no visible global function definition for 'sd'
ridge: no visible global function definition for 'pnorm'
Undefined global functions or variables:
  dev.off legend mad matplot pf png pnorm sd
Consider adding
  importFrom("grDevices", "dev.off", "png")
  importFrom("graphics", "legend", "matplot")
  importFrom("stats", "mad", "pf", "pnorm", "sd")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/ledger.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/legislatoR.Rcheck/00install.out' for details.
Running examples in 'lemon-Ex.R' failed
The error most likely occurred in:

> ### Name: guidebox_as_column
> ### Title: Guidebox as a column
> ### Aliases: guidebox_as_column
> 
> ### ** Examples
> 
> library(ggplot2)

Attaching package: 'ggplot2'

The following objects are masked from 'package:lemon':

    CoordCartesian, element_render

> library(dplyr)
Error: package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Error(s) in re-building vignettes:
--- re-building 'capped-axes.Rmd' using rmarkdown
--- finished re-building 'capped-axes.Rmd'

--- re-building 'facet-rep-labels.Rmd' using rmarkdown
--- finished re-building 'facet-rep-labels.Rmd'

--- re-building 'geoms.Rmd' using rmarkdown
--- finished re-building 'geoms.Rmd'

--- re-building 'gtable_show_lemonade.Rmd' using rmarkdown
--- finished re-building 'gtable_show_lemonade.Rmd'

--- re-building 'legends.Rmd' using rmarkdown
--- finished re-building 'legends.Rmd'

--- re-building 'lemon_print.Rmd' using rmarkdown
Quitting from lines 143-145 (lemon_print.Rmd) 
Error: processing vignette 'lemon_print.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'lemon_print.Rmd'

SUMMARY: processing the following file failed:
  'lemon_print.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'LexisNexisTools-Ex.R' failed
The error most likely occurred in:

> ### Name: lnt_convert
> ### Title: Convert LNToutput to other formats
> ### Aliases: lnt_convert lnt2df lnt2rDNA lnt2quanteda lnt2tm lnt2cptools
> ###   lnt2tidy lnt2SQLite
> 
> ### ** Examples
> 
> LNToutput <- lnt_read(lnt_sample(copy = FALSE))
Creating LNToutput from 1 file...
	...files loaded [0.00 secs]
	...articles split [0.047 secs]
	...lengths extracted [0.062 secs]
	...newspapers extracted [0.062 secs]
	...dates extracted [0.062 secs]
	...authors extracted [0.062 secs]
	...sections extracted [0.062 secs]
	...editions extracted [0.062 secs]
	...headlines extracted [0.078 secs]
	...dates converted [0.078 secs]
	...metadata extracted [0.094 secs]
	...article texts extracted [0.11 secs]
	...paragraphs extracted [0.12 secs]
	...superfluous whitespace removed [0.14 secs]
Elapsed time: 0.14 secs
> 
> df <- lnt_convert(LNToutput, to = "data.frame")
> 
> docs <- lnt_convert(LNToutput, to = "rDNA")
> 
> corpus <- lnt_convert(LNToutput, to = "quanteda")
> 
> tCorpus <- lnt_convert(LNToutput, to = "corpustools")
> 
> tidy <- lnt_convert(LNToutput, to = "tidytext")
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: lnt_convert ... loadNamespace -> namespaceImport -> loadNamespace -> library.dynam
Execution halted
Running 'spelling.R' [0s]
  Running 'testthat.R' [34s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library("testthat")
  > library("LexisNexisTools")
  LexisNexisTools Version 0.3.1
  > 
  > test_check("LexisNexisTools")
  -- 1. Error: Convert LNToutput to tidytext (@test-lnt_convert.R#102)  ----------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. testthat::expect_equivalent(...)
    4. LexisNexisTools::lnt_convert(...)
    5. LexisNexisTools::lnt2tidy(x, what = what, ...)
    6. tidytext::unnest_tokens
    7. base::getExportedValue(pkg, name)
    8. base::asNamespace(ns)
    9. base::getNamespace(ns)
   10. base::loadNamespace(name)
   12. base::loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]])
   13. base::library.dynam(lib, package, package.lib)
  
  
    |                                                  | 0 % ~calculating  
    |+++++                                             | 10% ~00s          
    |++++++++++                                        | 20% ~00s          
    |+++++++++++++++                                   | 30% ~00s          
    |++++++++++++++++++++                              | 40% ~00s          
    |+++++++++++++++++++++++++                         | 50% ~00s          
    |++++++++++++++++++++++++++++++                    | 60% ~00s          
    |+++++++++++++++++++++++++++++++++++               | 70% ~00s          
    |++++++++++++++++++++++++++++++++++++++++          | 80% ~00s          
    |+++++++++++++++++++++++++++++++++++++++++++++     | 90% ~00s          
    |++++++++++++++++++++++++++++++++++++++++++++++++++| 100% elapsed=00s  
    adding: sample.DOCX (deflated 45%)
  == testthat results  ===========================================================
  [ OK: 99 | SKIPPED: 2 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: Convert LNToutput to tidytext (@test-lnt_convert.R#102) 
  
  Error: testthat unit tests failed
  Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/LexisPlotR.Rcheck/00install.out' for details.
Package suggested but not available for checking: 'doMC'
Package unavailable to check Rd xrefs: 'doMC'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/LGRF.Rcheck/00install.out' for details.
Package suggested but not available for checking: 'rsyslog'
Package unavailable to check Rd xrefs: 'rsyslog'
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for 'liayson' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
installed size is  5.2Mb
  sub-directories of 1Mb or more:
    libs   5.1Mb
installed size is 17.9Mb
  sub-directories of 1Mb or more:
    libs  11.2Mb
    proj   6.6Mb
installed size is  5.6Mb
  sub-directories of 1Mb or more:
    libs   4.6Mb
installed size is  6.9Mb
  sub-directories of 1Mb or more:
    doc       1.2Mb
    extdata   1.1Mb
    libs      3.1Mb
installed size is  5.3Mb
  sub-directories of 1Mb or more:
    doc    2.1Mb
    libs   2.0Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/lifelogr.Rcheck/00install.out' for details.
installed size is  7.5Mb
  sub-directories of 1Mb or more:
    data   3.3Mb
    doc    2.1Mb
    libs   2.0Mb
Depends: includes the non-default packages:
  'sn', 'moments', 'BB', 'Bolstad2', 'optimx', 'Rmpfr'
Adding so many packages to the search path is excessive and importing
selectively is preferable.
Packages in Depends field not imported from:
  'BB' 'Bolstad2' 'Rmpfr' 'moments' 'optimx' 'sn'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Running examples in 'lillies-Ex.R' failed
The error most likely occurred in:

> ### Name: lyl
> ### Title: Life Years Lost at one specific age.
> ### Aliases: lyl
> 
> ### ** Examples
> 
> # Load simulated data as example
> data(simu_data)
> 
> # Estimate remaining life expectancy and Life Years
> # Lost after age 45 years and before age 95 years
> lyl_estimation <- lyl(data = simu_data, t = age_death, status = death,
+                       age_specific = 45, tau = 95)
1. Preparing and checking data...
2. Type of outcome data: 'logical' (TRUE = death / FALSE = alive) [no competing risks - one cause of death]
3. Estimating...
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: lyl ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/LilRhino.Rcheck/00install.out' for details.
plotBox: no visible global function definition for 'sd'
plotBox: no visible global function definition for 'rect'
plotBox: no visible global function definition for 'qnorm'
plotBox: no visible global function definition for 'segments'
plotInit: no visible global function definition for 'runif'
plotInit: no visible global function definition for 'mtext'
plotInit: no visible global function definition for 'segments'
plotStack: no visible global function definition for 'points'
Undefined global functions or variables:
  mtext points qnorm rect runif sd segments
Consider adding
  importFrom("graphics", "mtext", "points", "rect", "segments")
  importFrom("stats", "qnorm", "runif", "sd")
to your NAMESPACE file.
Malformed Title field: should not end in a period.
Plotranges.double: no visible global function definition for 'strwidth'
Plotranges.double: no visible global function definition for
  'strheight'
Plotranges.double: no visible global function definition for 'plot.new'
Plotranges.double: no visible global function definition for 'par'
Plotranges.double: no visible global function definition for
  'plot.window'
Plotranges.double: no visible global function definition for 'mtext'
Plotranges.double: no visible global function definition for 'abline'
Plotranges.double: no visible global function definition for 'points'
Plotranges.double: no visible global function definition for 'segments'
Plotranges.double: no visible global function definition for 'text'
Plotranges.double: no visible global function definition for 'axis'
Plotranges.double: no visible global function definition for 'box'
Plotranges.double: no visible global function definition for 'title'
Undefined global functions or variables:
  abline axis box mtext par plot.new plot.window points segments
  strheight strwidth text title
Consider adding
  importFrom("graphics", "abline", "axis", "box", "mtext", "par",
             "plot.new", "plot.window", "points", "segments",
             "strheight", "strwidth", "text", "title")
to your NAMESPACE file.
class.calib: no visible global function definition for 'lm'
class.calib: no visible global function definition for 'coef'
class.calib: no visible global function definition for 'qt'
hoad.calib: no visible global function definition for 'lm'
hoad.calib: no visible global function definition for 'anova'
hoad.calib: no visible global function definition for 'qt'
hoad.calib: no visible global function definition for 'rnorm'
huntlam.calib: no visible global function definition for 'lm'
huntlam.calib: no visible global function definition for 'anova'
huntlam.calib: no visible global function definition for 'rnorm'
huntlam.calib: no visible global function definition for 'qnorm'
inver.calib: no visible global function definition for 'lm'
inver.calib: no visible global function definition for 'coef'
inver.calib: no visible global function definition for 'anova'
inver.calib: no visible global function definition for 'qnorm'
Undefined global functions or variables:
  anova coef lm qnorm qt rnorm
Consider adding
  importFrom("stats", "anova", "coef", "lm", "qnorm", "qt", "rnorm")
to your NAMESPACE file.
Running examples in 'lineartestr-Ex.R' failed
The error most likely occurred in:

> ### Name: dominguez_lobato_test
> ### Title: Tests the specification of a linear model using wild-bootstrap.
> ### Aliases: dominguez_lobato_test
> 
> ### ** Examples
> 
> 
> x <- 1:10 + rnorm(10)
> y <- 1:10
> model <- lm(y~x)
> dl_test <- dominguez_lobato_test(model)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: dominguez_lobato_test ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/lineqGPR.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/lin.eval.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
gcomb: no visible global function definition for 'complete.cases'
linkim: no visible global function definition for 'runif'
missing.dist: no visible global function definition for
  'complete.cases'
pgdata1: no visible global function definition for 'barplot'
pgdata1: no visible global function definition for 'layout'
pgdata1: no visible global function definition for 'par'
pgdata1: no visible global function definition for 'rainbow'
singim: no visible global function definition for 'complete.cases'
singim: no visible global function definition for 'runif'
Undefined global functions or variables:
  barplot complete.cases layout par rainbow runif
Consider adding
  importFrom("grDevices", "rainbow")
  importFrom("graphics", "barplot", "layout", "par")
  importFrom("stats", "complete.cases", "runif")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/linkspotter.Rcheck/00install.out' for details.
gen.lms: no visible global function definition for 'na.omit'
plot.idf: no visible global function definition for 'mtext'
plot.idf: no visible global function definition for 'points'
plot.idf: no visible global function definition for 'segments'
plot.idf: no visible global function definition for 'ftable'
plot.idf: no visible global function definition for 'image'
plot.idf: no visible global function definition for 'gray'
plot.idf: no visible global function definition for 'abline'
plot.s.linlir: no visible global function definition for 'mtext'
plot.s.linlir: no visible global function definition for 'polygon'
plot.s.linlir: no visible global function definition for 'points'
plot.s.linlir: no visible global function definition for 'curve'
s.linlir: no visible global function definition for 'na.omit'
s.linlir: no visible global function definition for 'dbinom'
s.linlir: no visible global function definition for 'pchisq'
Undefined global functions or variables:
  abline curve dbinom ftable gray image mtext na.omit pchisq points
  polygon segments
Consider adding
  importFrom("grDevices", "gray")
  importFrom("graphics", "abline", "curve", "image", "mtext", "points",
             "polygon", "segments")
  importFrom("stats", "dbinom", "ftable", "na.omit", "pchisq")
to your NAMESPACE file.
'library' or 'require' call to 'lpSolve' which was already attached by Depends.
  Please remove these calls from your code.
Package in Depends field not imported from: 'lpSolve'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
solveLP: no visible global function definition for 'lp'
Undefined global functions or variables:
  lp
installed size is  5.1Mb
  sub-directories of 1Mb or more:
    data   5.0Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/lipidomeR.Rcheck/00install.out' for details.
installed size is  6.3Mb
  sub-directories of 1Mb or more:
    doc    2.2Mb
    libs   3.5Mb
last: no visible global function definition for 'tail'
Undefined global functions or variables:
  tail
Consider adding
  importFrom("utils", "tail")
to your NAMESPACE file.
getMatrix : <anonymous>: no visible global function definition for
  'read.table'
Undefined global functions or variables:
  read.table
Consider adding
  importFrom("utils", "read.table")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/litteR.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/livechatR.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/live.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/llama.Rcheck/00install.out' for details.
'library' or 'require' call to 'scatterplot3d' which was already attached by Depends.
  Please remove these calls from your code.
'library' or 'require' call to 'rgl' in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/LLSR.Rcheck/00install.out' for details.
lm.beta: no visible global function definition for 'coef'
lm.beta: no visible global function definition for 'model.matrix'
lm.beta: no visible global function definition for 'model.frame'
Undefined global functions or variables:
  coef model.frame model.matrix
Consider adding
  importFrom("stats", "coef", "model.frame", "model.matrix")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/lmds.Rcheck/00install.out' for details.
installed size is  9.1Mb
  sub-directories of 1Mb or more:
    R          1.5Mb
    doc        2.4Mb
    libs       2.6Mb
    testdata   1.6Mb
'library' or 'require' call to 'mvtnorm' which was already attached by Depends.
  Please remove these calls from your code.
lmec: warning in qr.Q(qrZ, compl = TRUE): partial argument match of
  'compl' to 'complete'
lmec: warning in qr.Q(qra, compl = TRUE): partial argument match of
  'compl' to 'complete'
lmec: no visible global function definition for 'lm'
lmec: no visible global function definition for 'pnorm'
lmec: no visible global function definition for 'dnorm'
lmec : vtrnorm2: no visible global function definition for 'runif'
lmec : vtrnorm2: no visible global function definition for 'qnorm'
lmec : vtrnorm2: no visible global function definition for 'pnorm'
lmec: no visible global function definition for 'rnorm'
lmec: no visible global function definition for 'ar'
Undefined global functions or variables:
  ar dnorm lm pnorm qnorm rnorm runif
Consider adding
  importFrom("stats", "ar", "dnorm", "lm", "pnorm", "qnorm", "rnorm",
             "runif")
to your NAMESPACE file.
Running 'testthat.R' [79s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(lmeInfo)
  > 
  > test_check("lmeInfo")
  -- 1. Error: (unknown) (@test-multivariate-models.R#1)  ------------------------
  package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::library(dplyr, warn.conflicts = FALSE, quietly = TRUE)
   2. base::tryCatch(...)
   3. base:::tryCatchList(expr, classes, parentenv, handlers)
   4. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   5. value[[3L]](cond)
  
  == testthat results  ===========================================================
  [ OK: 1198 | SKIPPED: 7 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: (unknown) (@test-multivariate-models.R#1) 
  
  Error: testthat unit tests failed
  Execution halted
mq.diagnostics : mq_missinggenotype_plot: no visible global function
  definition for 'plot.missing'
Undefined global functions or variables:
  plot.missing
Package vignette with placeholder title 'Vignette Title':
  'lmem.qtler.Rmd'
Running 'testthat.R' [5s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(lmeresampler)
  > 
  > test_check("lmeresampler")
  -- 1. Error: (unknown) (@test-case-lme4.R#4)  ----------------------------------
  package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
   DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
   1. base::library(dplyr, quietly = TRUE)
   2. base::tryCatch(...)
   3. base:::tryCatchList(expr, classes, parentenv, handlers)
   4. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   5. value[[3L]](cond)
  
  == testthat results  ===========================================================
  [ OK: 0 | SKIPPED: 53 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: (unknown) (@test-case-lme4.R#4) 
  
  Error: testthat unit tests failed
  Execution halted
Malformed Title field: should not end in a period.
Malformed Description field: should contain one or more complete sentences.
Package in Depends field not imported from: 'nlme'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
approx.Z : <anonymous>: no visible global function definition for
  'approx'
smspline: no visible global function definition for 'model.frame'
Undefined global functions or variables:
  approx model.frame
Consider adding
  importFrom("stats", "approx", "model.frame")
to your NAMESPACE file.
Package which this enhances but not available for checking: 'sl3'
Package vignette with placeholder title 'Vignette Title':
  'LN0SCIs-tutorial.Rmd'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/LncFinder.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/LocFDRPois.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/locfit.Rcheck/00install.out' for details.
Running examples in 'loewesadditivity-Ex.R' failed
The error most likely occurred in:

> ### Name: estimate_params
> ### Title: Estimate the parameters for a given data set and model
> ### Aliases: estimate_params
> 
> ### ** Examples
> 
> 
> df <- loewesadditivity::cyrpa_ripr
> df$dose_A <- df$CyRPA
> df$dose_B <- df$RIPR
> data <- fortify_gia_data(df)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: fortify_gia_data ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'quickstart.Rmd' using rmarkdown
Loading loewesadditivity
Warning in (function (dep_name, dep_ver = "*")  :
  Dependency package 'dplyr' not available.
Warning in (function (dep_name, dep_ver = "*")  :
  Dependency package 'tidyr' not available.
Quitting from lines 32-35 (quickstart.Rmd) 
Error: processing vignette 'quickstart.Rmd' failed with diagnostics:
Dependency package(s) 'dplyr','tidyr' not available.
--- failed re-building 'quickstart.Rmd'

SUMMARY: processing the following file failed:
  'quickstart.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'LOGAN-Ex.R' failed
The error most likely occurred in:

> ### Name: CleanActions
> ### Title: Clean events
> ### Aliases: CleanActions
> 
> ### ** Examples
> 
> # Data preparation
> df <- cp025q01
> df$id <- paste(df[, 1], df[, 2], df[, 3], sep = "-")
> df <- m0$TrimVar(df, c("event", "event_type", "diag_state"))
> df <- m0$ConcatActions(df, c(rlang::quo(event), rlang::quo(event_type)))
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: <Anonymous> ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Malformed Title field: should not end in a period.
Package in Depends field not imported from: 'logcondens'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Malformed Title field: should not end in a period.
EstimateProbability: no visible global function definition for
  'predict'
LOGICOIL: no visible binding for global variable 'pssm'
LOGICOIL: no visible binding for global variable 'LOGICOILfit'
LOGICOIL: no visible binding for global variable 'Model_Parameters'
plot_LOGICOIL: no visible global function definition for 'png'
plot_LOGICOIL: no visible global function definition for 'par'
plot_LOGICOIL: no visible global function definition for 'lines'
plot_LOGICOIL: no visible global function definition for 'axis'
plot_LOGICOIL: no visible global function definition for 'mtext'
plot_LOGICOIL: no visible global function definition for 'legend'
plot_LOGICOIL: no visible global function definition for 'dev.off'
Undefined global functions or variables:
  LOGICOILfit Model_Parameters axis dev.off legend lines mtext par png
  predict pssm
Consider adding
  importFrom("grDevices", "dev.off", "png")
  importFrom("graphics", "axis", "legend", "lines", "mtext", "par")
  importFrom("stats", "predict")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/logistf.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
LogitNet.weight: no visible global function definition for 'lowess'
LogitNet.weight: no visible global function definition for 'median'
Undefined global functions or variables:
  lowess median
Consider adding
  importFrom("stats", "lowess", "median")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
rloglognorm: no visible global function definition for 'runif'
Undefined global functions or variables:
  runif
Consider adding
  importFrom("stats", "runif")
to your NAMESPACE file.
Error(s) in re-building vignettes:
--- re-building 'aggregateCorrelated.Rmd' using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
--- finished re-building 'aggregateCorrelated.Rmd'

--- re-building 'lognorm.Rmd' using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Quitting from lines 17-40 (lognorm.Rmd) 
Error: processing vignette 'lognorm.Rmd' failed with diagnostics:
could not find function "exit"
--- failed re-building 'lognorm.Rmd'

--- re-building 'lognormalSum.Rmd' using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Quitting from lines 16-39 (lognormalSum.Rmd) 
Error: processing vignette 'lognormalSum.Rmd' failed with diagnostics:
could not find function "exit"
--- failed re-building 'lognormalSum.Rmd'

SUMMARY: processing the following files failed:
  'lognorm.Rmd' 'lognormalSum.Rmd'

Error: Vignette re-building failed.
Execution halted
LogrankA: no visible global function definition for 'is.Surv'
LogrankA: no visible global function definition for 'na.omit'
LogrankA: no visible global function definition for 'pchisq'
Undefined global functions or variables:
  is.Surv na.omit pchisq
Consider adding
  importFrom("stats", "na.omit", "pchisq")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/LogrankPower.Rcheck/00install.out' for details.
Found the following significant warnings:
  d:/RCompile/CRANpkg/lib/4.0/BH/include/boost/container/detail/copy_move_algo.hpp:182:19: warning: 'void* memmove(void*, const void*, size_t)' writing to an object of type 'value_type' {aka 'struct boost::container::dtl::pair<int, int>'} with no trivial copy-assignment; use copy-assignment or copy-initialization instead [-Wclass-memaccess]
  d:/RCompile/CRANpkg/lib/4.0/BH/include/boost/container/detail/copy_move_algo.hpp:896:16: warning: 'void* memmove(void*, const void*, size_t)' writing to an object of type 'boost::movelib::detail::iterator_to_element_ptr<boost::container::dtl::pair<int, int>*>::element_type' {aka 'struct boost::container::dtl::pair<int, int>'} with no trivial copy-assignment; use copy-assignment or copy-initialization instead [-Wclass-memaccess]
  d:/RCompile/CRANpkg/lib/4.0/BH/include/boost/container/detail/copy_move_algo.hpp:196:19: warning: 'void* memmove(void*, const void*, size_t)' writing to an object of type 'boost::movelib::detail::iterator_to_element_ptr<boost::container::dtl::pair<int, int>*>::element_type' {aka 'struct boost::container::dtl::pair<int, int>'} with no trivial copy-assignment; use copy-assignment or copy-initialization instead [-Wclass-memaccess]
See 'd:/Rcompile/CRANpkg/local/4.0/lolog.Rcheck/00install.out' for details.
installed size is  6.3Mb
  sub-directories of 1Mb or more:
    libs   4.8Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/LongCART.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/longitudinalcascade.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/lookupTable.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/loon.ggplot.Rcheck/00install.out' for details.
fplot: no visible global function definition for 'rnorm'
fplot: no visible global function definition for 'segments'
fplot: no visible global function definition for 'points'
fplot: no visible global function definition for 'text'
fplot.foodweb: no visible global function definition for 'segments'
fplot.foodweb: no visible global function definition for 'points'
fplot.foodweb: no visible global function definition for 'text'
gplot: no visible global function definition for 'runif'
groupplot: no visible global function definition for 'rnorm'
groupplot: no visible global function definition for 'segments'
groupplot: no visible global function definition for 'points'
groupplot: no visible global function definition for 'text'
groupplot.foodweb: no visible global function definition for 'rnorm'
groupplot.foodweb: no visible global function definition for 'segments'
groupplot.foodweb: no visible global function definition for 'points'
groupplot.foodweb: no visible global function definition for 'text'
Undefined global functions or variables:
  points rnorm runif segments text
Consider adding
  importFrom("graphics", "points", "segments", "text")
  importFrom("stats", "rnorm", "runif")
to your NAMESPACE file.
amendColumns: no visible global function definition for 'setNames'
fillColumns: no visible global function definition for 'setNames'
Undefined global functions or variables:
  setNames
Consider adding
  importFrom("stats", "setNames")
to your NAMESPACE file.
Error(s) in re-building vignettes:
--- re-building 'Looping.Rmd' using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Quitting from lines 24-28 (Looping.Rmd) 
Error: processing vignette 'Looping.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'Looping.Rmd'

SUMMARY: processing the following file failed:
  'Looping.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/loose.rock.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
installed size is  6.6Mb
  sub-directories of 1Mb or more:
    extdata   4.5Mb
    libs      2.1Mb
Package suggested but not available for checking: 'doMC'
Checking should be performed on sources prepared by 'R CMD build'.
Malformed Description field: should contain one or more complete sentences.
lpint : <anonymous>: no visible global function definition for
  'integrate'
lpint: no visible global function definition for 'integrate'
lpint : lpint : <anonymous>: no visible global function definition for
  'integrate'
lplikint : lplikint.fun : <anonymous>: no visible global function
  definition for 'integrate'
Undefined global functions or variables:
  integrate
Consider adding
  importFrom("stats", "integrate")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/lpirfs.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/lplyr.Rcheck/00install.out' for details.
'library' or 'require' call to 'Rsymphony' in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
mipSolve.Rsymphony: no visible global function definition for
  'Rsymphony_solve_LP'
Undefined global functions or variables:
  Rsymphony_solve_LP
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/LPRelevance.Rcheck/00install.out' for details.
learnPattern.default: no visible global function definition for 'runif'
plot.learnPattern: no visible global function definition for 'matplot'
plotMDS: no visible global function definition for 'par'
plotMDS: no visible global function definition for 'rainbow'
plotMDS: no visible global function definition for 'pairs'
visualizePattern: no visible global function definition for 'par'
visualizePattern: no visible global function definition for 'points'
visualizePattern: no visible global function definition for 'legend'
Undefined global functions or variables:
  legend matplot pairs par points rainbow runif
Consider adding
  importFrom("grDevices", "rainbow")
  importFrom("graphics", "legend", "matplot", "pairs", "par", "points")
  importFrom("stats", "runif")
to your NAMESPACE file.
LP.comoment: no visible global function definition for 'cor'
LP.comoment: no visible global function definition for 'cov'
LP.moment: no visible global function definition for 'cor'
LPTrans: no visible global function definition for 'ecdf'
VAR: no visible global function definition for 'embed'
VAR: no visible global function definition for 'lm'
Undefined global functions or variables:
  cor cov ecdf embed lm
Consider adding
  importFrom("stats", "cor", "cov", "ecdf", "embed", "lm")
to your NAMESPACE file.
Running examples in 'LSAmitR-Ex.R' failed
The error most likely occurred in:

> ### Encoding: UTF-8
> 
> ### Name: Kapitel  1
> ### Title: Kapitel 1: Testkonstruktion
> ### Aliases: 'Kapitel 1'
> 
> ### ** Examples
> 
> library(TAM)
Loading required package: CDM
Loading required package: mvtnorm
**********************************
** CDM 7.5-15 (2020-03-10 14:19:21)      
** Cognitive Diagnostic Models  **
**********************************

* TAM 3.5-19 (2020-05-05 22:45:39)
> library(miceadds)
Loading required package: mice
Error: package or namespace load failed for 'mice' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Error: package 'mice' could not be loaded
Execution halted
Malformed Description field: should contain one or more complete sentences.
Lsdv.formula: no visible global function definition for 'model.frame'
Lsdv.formula: no visible global function definition for 'model.matrix'
Lsdv.formula: no visible global function definition for
  'model.response'
lsdv: no visible global function definition for 'pf'
summary.Lsdv: no visible global function definition for 'coef'
summary.Lsdv: no visible global function definition for 'pt'
Undefined global functions or variables:
  coef model.frame model.matrix model.response pf pt
Consider adding
  importFrom("stats", "coef", "model.frame", "model.matrix",
             "model.response", "pf", "pt")
to your NAMESPACE file.
legend.lshorth: no visible global function definition for 'legend'
legend.lshorth: no visible global function definition for 'strwidth'
legend.lshorth: no visible global function definition for 'text'
plot.lshorth: no visible global function definition for 'plot.new'
plot.lshorth: no visible global function definition for 'plot.window'
plot.lshorth: no visible global function definition for 'axis'
plot.lshorth: no visible global function definition for 'title'
plot.lshorth: no visible global function definition for 'box'
plot.lshorth: no visible global function definition for 'lines'
plot.lshorth: no visible global function definition for 'legend'
plot.lshorth: no visible global function definition for 'strwidth'
plot.lshorth: no visible global function definition for 'text'
Undefined global functions or variables:
  axis box legend lines plot.new plot.window strwidth text title
Consider adding
  importFrom("graphics", "axis", "box", "legend", "lines", "plot.new",
             "plot.window", "strwidth", "text", "title")
to your NAMESPACE file.
installed size is  5.3Mb
  sub-directories of 1Mb or more:
    doc    1.6Mb
    libs   3.2Mb
Error(s) in re-building vignettes:
--- re-building 'lspline.Rmd' using rmarkdown
Quitting from lines 87-90 (lspline.Rmd) 
Error: processing vignette 'lspline.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'lspline.Rmd'

SUMMARY: processing the following file failed:
  'lspline.Rmd'

Error: Vignette re-building failed.
Execution halted
OC : Lnapprox: no visible global function definition for 'pnorm'
OC : Lnapprox: no visible global function definition for 'qnorm'
OC : Lt: no visible global function definition for 'pt'
OC : Lt: no visible global function definition for 'qnorm'
OC : OC_emwa2: no visible global function definition for 'pnorm'
OC : OC_emwa2: no visible global function definition for 'qnorm'
OC: no visible global function definition for 'pnorm'
OC: no visible global function definition for 'qnorm'
cmBE : LAtHy: no visible global function definition for 'phyper'
cmBE: no visible global function definition for 'uniroot'
planAOQL : Gderivacex: no visible global function definition for
  'pnorm'
planAOQL : Mnk: no visible global function definition for 'uniroot'
planAOQL : k0AOQL : delta: no visible global function definition for
  'pnorm'
planAOQL : alpha0: no visible global function definition for 'pnorm'
planAOQL : alpha0: no visible global function definition for 'qnorm'
planAOQL : fMSmodq2: no visible global function definition for
  'optimize'
planAOQL : kAOQL: no visible global function definition for 'uniroot'
planLTPD : nAPPROXL : k0L : g: no visible global function definition
  for 'qnorm'
planLTPD : nAPPROXL : k0L : h: no visible global function definition
  for 'qnorm'
planLTPD : nAPPROXL : k0L: no visible global function definition for
  'qnorm'
planLTPD : nAPPROXL : alpha0: no visible global function definition for
  'pnorm'
planLTPD : nAPPROXL : alpha0: no visible global function definition for
  'qnorm'
planLTPD : nAPPROXL: no visible global function definition for
  'uniroot'
planLTPD : kEWMA: no visible global function definition for 'uniroot'
Undefined global functions or variables:
  optimize phyper pnorm pt qnorm uniroot
Consider adding
  importFrom("stats", "optimize", "phyper", "pnorm", "pt", "qnorm",
             "uniroot")
to your NAMESPACE file.
'library' or 'require' calls to packages already attached by Depends:
  'MASS' 'robustbase'
  Please remove these calls from your code.
ltsbase: no visible global function definition for 'lm'
ltsbase: no visible global function definition for 'lines'
ltsbase: no visible global function definition for 'legend'
Undefined global functions or variables:
  legend lines lm
Consider adding
  importFrom("graphics", "legend", "lines")
  importFrom("stats", "lm")
to your NAMESPACE file.
Error(s) in re-building vignettes:
--- re-building 'lucid_examples.Rmd' using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Loading required package: lucid
Loading required package: lattice
Quitting from lines 180-183 (lucid_examples.Rmd) 
Error: processing vignette 'lucid_examples.Rmd' failed with diagnostics:
could not find function "%>%"
--- failed re-building 'lucid_examples.Rmd'

SUMMARY: processing the following file failed:
  'lucid_examples.Rmd'

Error: Vignette re-building failed.
Execution halted
installed size is  6.5Mb
  sub-directories of 1Mb or more:
    R      1.6Mb
    help   1.1Mb
    libs   2.1Mb
terrestrial.season: no visible global function definition for 'is'
Undefined global functions or variables:
  is
Consider adding
  importFrom("methods", "is")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
installed size is  6.4Mb
  sub-directories of 1Mb or more:
    R      4.0Mb
    libs   2.1Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/lvm4net.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/lvnet.Rcheck/00install.out' for details.
installed size is 12.4Mb
  sub-directories of 1Mb or more:
    libs  12.2Mb
Found the following significant warnings:
  lxb.c:62:21: warning: '%d' directive writing between 1 and 11 bytes into a region of size 4 [-Wformat-overflow=]
See 'd:/Rcompile/CRANpkg/local/4.0/lxb.Rcheck/00install.out' for details.
generate.clonal.data : pcr.rpareto.func: no visible global function
  definition for 'runif'
generate.clonal.data : get.readcount.given.cellcount: no visible global
  function definition for 'rlnorm'
generate.clonal.data: no visible global function definition for
  'rmultinom'
generate.clonal.data: no visible global function definition for 'rpois'
infer.clonality: no visible global function definition for 'cov'
infer.clonality: no visible global function definition for
  'capture.output'
Undefined global functions or variables:
  capture.output cov rlnorm rmultinom rpois runif
Consider adding
  importFrom("stats", "cov", "rlnorm", "rmultinom", "rpois", "runif")
  importFrom("utils", "capture.output")
to your NAMESPACE file.
Running examples in 'm2b-Ex.R' failed
The error most likely occurred in:

> ### Name: extractRF
> ### Title: Extract the random forest model from an xytb object
> ### Aliases: extractRF
> 
> ### ** Examples
> 
> #track_CAGA_005 is dataset
> #generate a complete xytb object with derived (over moving windows of 3, 5
> #and 9 points, with quantile at 0, 50 and 100%) and shifted information on 10
> #and 100 points
> xytb<-xytb(track_CAGA_005,"a track",c(3,5,9),c(0,.5,1),c(10,100))
[1] "Compute 55 indicators on 3 moving windows"
[1] "Compute indicators on 3 points"
[1] "Done"
[1] "Compute indicators on 5 points"
[1] "Done"
[1] "Compute indicators on 9 points"
[1] "Done"
[1] "shift value backward"
[1] "shift backward 10"
[1] "shift backward 100"
[1] "Done"
> #compute a random forest model to predict behaviour (b, where -1 is
> #unobserved behaviour) using the derived
> #parameters ("actual")
> xytb<-modelRF(xytb,"actual",nob="-1",colin=TRUE,varkeep=c("v","thetarel"),zerovar=TRUE)
[1] "removing lines with NA values"
[1] "removing colinearity among predictors"
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: modelRF ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'tutorial.Rmd' using rmarkdown
Warning: Use of `pipo$x` is discouraged. Use `x` instead.
Warning: Use of `pipo$y` is discouraged. Use `y` instead.
Warning: Use of `pipo$b` is discouraged. Use `b` instead.
Warning: Use of `pipo$id` is discouraged. Use `id` instead.
Quitting from lines 285-287 (tutorial.Rmd) 
Error: processing vignette 'tutorial.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'tutorial.Rmd'

SUMMARY: processing the following file failed:
  'tutorial.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/m2r.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/M2SMF.Rcheck/00install.out' for details.
project.M3.1.to.M3.2: no visible global function definition for
  'coordinates<-'
project.M3.1.to.M3.2: no visible global function definition for
  'proj4string<-'
project.M3.1.to.M3.2: no visible global function definition for 'CRS'
project.M3.1.to.M3.2: no visible global function definition for
  'spTransform'
project.M3.1.to.M3.2: no visible global function definition for
  'coordinates'
Undefined global functions or variables:
  CRS coordinates coordinates<- proj4string<- spTransform
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/mable.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
maboost.default: no visible global function definition for
  'flush.console'
maboost.default: no visible binding for global variable 'na.pass'
maboost.default : predict.type: no visible global function definition
  for 'predict'
maboost.formula: no visible global function definition for
  'model.extract'
maboost.machine.bin: no visible global function definition for 'runif'
maboost.machine.bin: no visible binding for global variable 'na.pass'
maboost.machine.multi: no visible global function definition for
  'runif'
maboost.machine.multi: no visible binding for global variable 'na.pass'
projsplx_k: no visible global function definition for 'tail'
varplot.maboost: no visible global function definition for 'dotchart'
Undefined global functions or variables:
  dotchart flush.console model.extract na.pass predict runif tail
Consider adding
  importFrom("graphics", "dotchart")
  importFrom("stats", "model.extract", "na.pass", "predict", "runif")
  importFrom("utils", "flush.console", "tail")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/MachineShop.Rcheck/00install.out' for details.
installed size is 12.2Mb
  sub-directories of 1Mb or more:
    TS_files     5.8Mb
    base_files   6.3Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/macleish.Rcheck/00install.out' for details.
logistic_z: no visible global function definition for 'glm'
logistic_z: no visible binding for global variable 'binomial'
logistic_z: no visible global function definition for 'predict'
plsrf_x: no visible global function definition for 'qnorm'
plsrf_x: no visible global function definition for 'predict'
plsrf_x_pv: no visible global function definition for 'qnorm'
plsrf_x_pv: no visible global function definition for 'predict'
plsrf_xz: no visible global function definition for 'qnorm'
plsrf_xz: no visible global function definition for 'predict'
plsrf_xz_pv: no visible global function definition for 'qnorm'
plsrf_xz_pv: no visible global function definition for 'predict'
rf_z: no visible global function definition for 'qnorm'
rf_z: no visible global function definition for 'predict'
simuldata_list: no visible global function definition for 'rnorm'
simuldatacluster_list: no visible global function definition for
  'rnorm'
svm_x: no visible global function definition for 'predict'
Undefined global functions or variables:
  binomial glm predict qnorm rnorm
Consider adding
  importFrom("stats", "binomial", "glm", "predict", "qnorm", "rnorm")
to your NAMESPACE file.
'library' or 'require' calls in package code:
  'R2wd' 'ggplot2' 'metafor'
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Package vignette with placeholder title 'Vignette Title':
  'maddison_project_database.Rmd'
Error(s) in re-building vignettes:
--- re-building 'introducing_madness.Rnw' using knitr
Quitting from lines 1148-1202 (introducing_madness.Rnw) 
Error: processing vignette 'introducing_madness.Rnw' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'introducing_madness.Rnw'

SUMMARY: processing the following file failed:
  'introducing_madness.Rnw'

Error: Vignette re-building failed.
Execution halted
GNU make is a SystemRequirements.
'library' or 'require' calls in package code:
  'R2wd' 'ggplot2' 'metafor'
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Check process probably crashed or hung up for 20 minutes ... killed
Most likely this happened in the example checks (?),
if not, ignore the following last lines of example output:
> cleanEx()
> nameEx("interactive_threshold")
> ### * interactive_threshold
> 
> flush(stderr()); flush(stdout())
> 
> ### Name: interactive_threshold
> ### Title: interactive thresholding
> ### Aliases: interactive_threshold
> 
> ### ** Examples
> 
> 
> 
> 
> ### * <FOOTER>
> ###
> cleanEx()
> options(digits = 7L)
> base::cat("Time elapsed: ", proc.time() - base::get("ptime", pos = 'CheckExEnv'),"\n")
Time elapsed:  1.13 0.06 1.18 NA NA 
> grDevices::dev.off()
null device 
          1 
> ###
> ### Local variables: ***
> ### mode: outline-minor ***
> ### outline-regexp: "\\(> \\)?### [*]+" ***
> ### End: ***
> quit('no')
======== End of example output (where/before crash/hang up occured ?) ========
installed size is 53.6Mb
  sub-directories of 1Mb or more:
    doc    6.5Mb
    libs  46.8Mb
Running examples in 'MAGNAMWAR-Ex.R' failed
The error most likely occurred in:

> ### Name: PDGPlot
> ### Title: Plot of a PDG and Data with Standard Error Bars
> ### Aliases: PDGPlot
> 
> ### ** Examples
> 
> 
> PDGPlot(pheno_data, mcl_mtrx, 'OG5_126778', 'Treatment', 'RespVar', ylimit=12)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: PDGPlot ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'using_mag.Rmd' using rmarkdown
Quitting from lines 258-259 (using_mag.Rmd) 
Error: processing vignette 'using_mag.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'using_mag.Rmd'

SUMMARY: processing the following file failed:
  'using_mag.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'maic-Ex.R' failed
The error most likely occurred in:

> ### Name: createMAICInput
> ### Title: Construct a MAIC input matrix
> ### Aliases: createMAICInput
> 
> ### ** Examples
> 
> target <- c("Air.Flow" = 60,
+            "Water.Temp" = 21,
+            "Prop.Acid.Conc.LT.90" = 0.7,
+            "min.air.flow" = 55)
> 
> stackloss$match.conc.lt.90 <- 
+   ifelse(stackloss$Acid.Conc. < 90, 1, 0)
> 
> dict <- data.frame(
+   "match.id" = 
+     c("airflow", "watertemp", 
+       "acidconc", "min.airflow"),
+   "target.variable" = 
+     c("Air.Flow", "Water.Temp",
+       "Prop.Acid.Conc.LT.90", "min.air.flow"),
+   "index.variable" = 
+     c("Air.Flow", "Water.Temp",
+       "match.conc.lt.90", "Air.Flow"),
+   "match.type" = 
+     c("mean", "mean", "proportion", "min"),
+   stringsAsFactors = FALSE)
> 
> ipmat <- createMAICInput(
+   index = stackloss,
+   target = target,
+   dictionary = dict,
+   matching.variables = 
+     c("airflow", "watertemp", 
+       "acidconc", "min.airflow"))
> 
> wts <- maicWeight(ipmat)
> 
> rcv <- reportCovariates(
+   stackloss, target, dict, 
+   matching.variables = 
+     c("airflow", "watertemp", 
+       "acidconc", "min.airflow"),
+   wts)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: reportCovariates ... loadNamespace -> namespaceImport -> loadNamespace -> library.dynam
Execution halted
Running 'testthat.R' [6s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(maic)
  > 
  > test_check("maic")
  -- 1. Error: Presentation of weighted data (@test_reportCovariates.R#85)  ------
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. testthat::expect_warning(...)
    6. maic::reportCovariates(...)
    7. weights::wtd.t.test
    8. base::getExportedValue(pkg, name)
    9. base::asNamespace(ns)
   10. base::getNamespace(ns)
   11. base::loadNamespace(name)
   14. base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
   17. base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
   19. base::loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]])
   20. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 111 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
  1. Error: Presentation of weighted data (@test_reportCovariates.R#85) 
  
  Error: testthat unit tests failed
  Execution halted
Malformed Description field: should contain one or more complete sentences.
installed size is  6.8Mb
  sub-directories of 1Mb or more:
    R      1.4Mb
    data   2.3Mb
    libs   2.8Mb
Package vignette with placeholder title 'Vignette Title':
  'introduction-to-package-majesticr--rmd.Rmd'
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/malan.Rcheck/00install.out' for details.
Package in Depends field not imported from: 'rJava'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
MalletLDA: no visible global function definition for '.jnew'
mallet.doc.topics: no visible global function definition for
  '.jevalArray'
mallet.import: no visible global function definition for 'J'
mallet.import: no visible global function definition for '.jnew'
mallet.import: no visible global function definition for '.jcast'
mallet.subset.topic.words: no visible global function definition for
  '.jevalArray'
mallet.topic.hclust: no visible global function definition for 'hclust'
mallet.topic.hclust: no visible global function definition for 'dist'
mallet.topic.words: no visible global function definition for
  '.jevalArray'
mallet.word.freqs: no visible global function definition for
  '.jevalArray'
Undefined global functions or variables:
  .jcast .jevalArray .jnew J dist hclust
Consider adding
  importFrom("stats", "dist", "hclust")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/mand.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/manhattanly.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/manifestoR.Rcheck/00install.out' for details.
Running examples in 'MANOVA.RM-Ex.R' failed
The error most likely occurred in:

> ### Name: EEG
> ### Title: EEG Measurements in Patients with Alzheimer's Disease (long
> ###   format)
> ### Aliases: EEG
> ### Keywords: datasets
> 
> ### ** Examples
> 
>   library(tidyverse)
Error: package or namespace load failed for 'tidyverse' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/manymodelr.Rcheck/00install.out' for details.
Error(s) in re-building vignettes:
--- re-building 'choropleth_maps_vignette.Rmd' using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Quitting from lines 13-22 (choropleth_maps_vignette.Rmd) 
Error: processing vignette 'choropleth_maps_vignette.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'choropleth_maps_vignette.Rmd'

--- re-building 'riding_binplot_vignette.Rmd' using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Quitting from lines 14-23 (riding_binplot_vignette.Rmd) 
Error: processing vignette 'riding_binplot_vignette.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'riding_binplot_vignette.Rmd'

SUMMARY: processing the following files failed:
  'choropleth_maps_vignette.Rmd' 'riding_binplot_vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
installed size is 33.5Mb
  sub-directories of 1Mb or more:
    mapdata  33.4Mb
installed size is 12.3Mb
  sub-directories of 1Mb or more:
    data          1.3Mb
    doc           1.6Mb
    htmlwidgets   1.9Mb
    libs          7.1Mb
cf1.sample: no visible global function definition for 'rexp'
cf1.sample: no visible global function definition for 'rmultinom'
dherlang : <anonymous> : <anonymous>: no visible global function
  definition for 'dgamma'
erhmm.param.kmeans: no visible global function definition for 'kmeans'
erhmm.param.kmeans: no visible global function definition for 'var'
erhmm.param.kmeans: no visible global function definition for 'runif'
gmmpp.param.kmeans: no visible global function definition for 'kmeans'
gmmpp.param.kmeans: no visible global function definition for 'runif'
herlang.param.kmeans: no visible global function definition for
  'kmeans'
herlang.param.kmeans: no visible global function definition for 'var'
map.param.kmeans: no visible global function definition for 'kmeans'
map.param.kmeans: no visible global function definition for 'runif'
ph.param.random: no visible global function definition for 'runif'
ph.sample: no visible global function definition for 'rmultinom'
ph.sample: no visible global function definition for 'rexp'
pherlang : <anonymous> : <anonymous>: no visible global function
  definition for 'pgamma'
rherlang: no visible global function definition for 'rmultinom'
rherlang : <anonymous>: no visible global function definition for
  'rgamma'
Undefined global functions or variables:
  dgamma kmeans pgamma rexp rgamma rmultinom runif var
Consider adding
  importFrom("stats", "dgamma", "kmeans", "pgamma", "rexp", "rgamma",
             "rmultinom", "runif", "var")
to your NAMESPACE file.
'library' or 'require' call to 'mgcv' which was already attached by Depends.
  Please remove these calls from your code.
ageprofile: no visible global function definition for 'model.frame'
ageprofile: no visible binding for global variable 'poisson'
ageprofile: no visible global function definition for 'predict.gam'
ageprofile: no visible global function definition for 'as.formula'
ageprofile: no visible global function definition for 'summary.gam'
ageprofile: no visible global function definition for 'contrasts<-'
ageprofile: no visible global function definition for 'anova.gam'
plotap: no visible global function definition for 'dev.new'
plotap: no visible global function definition for 'lines'
plotap: no visible global function definition for 'points'
plotap: no visible global function definition for 'legend'
splitter: no visible global function definition for 'reshape'
tabm: no visible global function definition for 'coef'
tabm: no visible global function definition for 'AIC'
Undefined global functions or variables:
  AIC anova.gam as.formula coef contrasts<- dev.new legend lines
  model.frame points poisson predict.gam reshape summary.gam
Consider adding
  importFrom("grDevices", "dev.new")
  importFrom("graphics", "legend", "lines", "points")
  importFrom("stats", "AIC", "as.formula", "coef", "contrasts<-",
             "model.frame", "poisson", "reshape")
to your NAMESPACE file.
Running examples in 'mapr-Ex.R' failed
The error most likely occurred in:

> ### Name: hull
> ### Title: Add a convex hull to a map
> ### Aliases: hull
> 
> ### ** Examples
> 
> # map spocc output, here using a built in object
> data(occdat_eg1)
> map_plot(occdat_eg1, hull = TRUE)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: map_plot ... namespaceImportFrom -> asNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'intro.Rmd' using rmarkdown
Quitting from lines 256-262 (intro.Rmd) 
Error: processing vignette 'intro.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'intro.Rmd'

SUMMARY: processing the following file failed:
  'intro.Rmd'

Error: Vignette re-building failed.
Execution halted
calcStats: no visible global function definition for 'as.formula'
calcStats: no visible global function definition for 'na.omit'
Undefined global functions or variables:
  as.formula na.omit
Consider adding
  importFrom("stats", "as.formula", "na.omit")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/MarginalMediation.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/MarketMatching.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/marketr.Rcheck/00install.out' for details.
negbin.rel.clust: no visible global function definition for 'kmeans'
negbin.rel.clust: no visible global function definition for 'matplot'
negbin.rel.pca: no visible global function definition for 'princomp'
negbin.rel.pca: no visible global function definition for 'biplot'
pois.rel.clust: no visible global function definition for 'kmeans'
pois.rel.clust: no visible global function definition for 'matplot'
pois.rel.pca: no visible global function definition for 'princomp'
pois.rel.pca: no visible global function definition for 'biplot'
sim.negbin: no visible global function definition for 'rnbinom'
sim.pois: no visible global function definition for 'rpois'
wt.rel.negbin: no visible global function definition for 'var'
wt.rel.negbin: no visible global function definition for 'optimize'
wt.rel.negbin: no visible global function definition for 'integrate'
wt.rel.pois: no visible global function definition for 'optimize'
wt.rel.pois: no visible global function definition for 'integrate'
Undefined global functions or variables:
  biplot integrate kmeans matplot optimize princomp rnbinom rpois var
Consider adding
  importFrom("graphics", "matplot")
  importFrom("stats", "biplot", "integrate", "kmeans", "optimize",
             "princomp", "rnbinom", "rpois", "var")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
'library' or 'require' call to 'MASS' which was already attached by Depends.
  Please remove these calls from your code.
mAr.pca: no visible binding for global variable 'sd'
Undefined global functions or variables:
  sd
Consider adding
  importFrom("stats", "sd")
to your NAMESPACE file.
Error(s) in re-building vignettes:
--- re-building 'maSAE.Rnw' using Sweave

Attaching package: 'maSAE'

The following object is masked from 'package:stats':

    predict

--- finished re-building 'maSAE.Rnw'

--- re-building 'forestinventory_and_maSAE.Rmd' using rmarkdown
Quitting from lines 21-23 (forestinventory_and_maSAE.Rmd) 
Error: processing vignette 'forestinventory_and_maSAE.Rmd' failed with diagnostics:
package or namespace load failed for 'forestinventory' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'forestinventory_and_maSAE.Rmd'

--- re-building 'A_Taxonomy_of_Estimators.tex' using tex
--- finished re-building 'A_Taxonomy_of_Estimators.tex'

SUMMARY: processing the following file failed:
  'forestinventory_and_maSAE.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/mase.Rcheck/00install.out' for details.
Running examples in 'mason-Ex.R' failed
The error most likely occurred in:

> ### Name: construct
> ### Title: Construct the results of the analysis
> ### Aliases: construct
> 
> ### ** Examples
> 
> 
> design(iris, 'cor') %>%
+  add_settings() %>%
+  add_variables('xvars', c('Sepal.Length', 'Sepal.Width')) %>%
+  construct()
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: %>% ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Running 'testthat.R' [1s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(mason)
  > 
  > test_check("mason")
  Error in library.dynam(lib, package, package.lib) : 
    DLL 'dplyr' not found: maybe not installed for this architecture?
  Calls: test_check ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
  Execution halted
Error(s) in re-building vignettes:
--- re-building 'mason.Rmd' using rmarkdown
Quitting from lines 102-104 (mason.Rmd) 
Error: processing vignette 'mason.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'mason.Rmd'

SUMMARY: processing the following file failed:
  'mason.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/MASS.Rcheck/00install.out' for details.
installed size is  7.7Mb
  sub-directories of 1Mb or more:
    java   3.3Mb
    libs   3.2Mb
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/matchMulti.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/MatchThem.Rcheck/00install.out' for details.
Malformed Description field: should contain one or more complete sentences.
Found the following possibly unsafe calls:
File 'matlab/R/zzz.R':
  unlockBinding("savedTime", .MatlabNamespaceEnv)

colorbar : colorbar.EO: no visible global function definition for 'par'
colorbar : colorbar.EO: no visible global function definition for
  'axis'
colorbar : colorbar.EO: no visible global function definition for
  'axTicks'
colorbar : colorbar.EO: no visible global function definition for 'box'
colorbar : colorbar.NO: no visible global function definition for
  'axis'
colorbar : colorbar.NO: no visible global function definition for
  'axTicks'
colorbar : colorbar.NO: no visible global function definition for 'box'
imagesc : pretty.axp: no visible global function definition for 'par'
imagesc: no visible global function definition for 'axis'
imagesc: no visible global function definition for 'box'
jet.colors: no visible global function definition for 'rgb'
multiline.plot.colors : get.gca.colororder: no visible global function
  definition for 'rgb'
std: no visible global function definition for 'sd'
Undefined global functions or variables:
  axTicks axis box par rgb sd
Consider adding
  importFrom("grDevices", "rgb")
  importFrom("graphics", "axTicks", "axis", "box", "par")
  importFrom("stats", "sd")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/matman.Rcheck/00install.out' for details.
Package suggested but not available for checking: 'gputools'
'library' or 'require' call to 'bigmemory' in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Malformed Description field: should contain one or more complete sentences.
MAT: no visible global function definition for 'dev.new'
MAT: no visible global function definition for 'points'
MAT: no visible global function definition for 'abline'
MAT: no visible global function definition for 'text'
MAT: no visible global function definition for 'legend'
MAT: no visible global function definition for 'lines'
MAT: no visible global function definition for 'par'
MAT: no visible global function definition for 'barplot'
MAT: no visible global function definition for 'cor'
print.MAT: no visible global function definition for 'sd'
print.MAT: no visible global function definition for 'cor'
simM3PL: no visible global function definition for 'rnorm'
simM3PL: no visible global function definition for 'runif'
Undefined global functions or variables:
  abline barplot cor dev.new legend lines par points rnorm runif sd
  text
Consider adding
  importFrom("grDevices", "dev.new")
  importFrom("graphics", "abline", "barplot", "legend", "lines", "par",
             "points", "text")
  importFrom("stats", "cor", "rnorm", "runif", "sd")
to your NAMESPACE file.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/matrixStats.Rcheck/00install.out' for details.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/matsbyname.Rcheck/00install.out' for details.
Malformed Title field: should not end in a period.
GSTplot : <anonymous>: no visible global function definition for
  't.test'
GSTplot: no visible global function definition for 'rt'
GSTplot: no visible global function definition for 'layout'
GSTplot: no visible global function definition for 'par'
GSTplot: no visible global function definition for 'text'
GSTplot: no visible global function definition for 'lines'
GSTplot: no visible global function definition for 'polygon'
GSTplot: no visible global function definition for 'abline'
GSTplot: no visible global function definition for 'ecdf'
GSTplot: no visible global function definition for 'knots'
GSTplot : <anonymous>: no visible global function definition for 'aov'
GSTplot: no visible global function definition for 'qf'
MAVTn : <anonymous>: no visible global function definition for 'aov'
MAVTn: no visible global function definition for 'p.adjust'
MAVTn: no visible global function definition for 'par'
MAVTn: no visible global function definition for 'abline'
MAVTn: no visible global function definition for 'legend'
MAVTn: no visible global function definition for 'locator'
Tols : olsf: no visible global function definition for 't.test'
Tols: no visible global function definition for 'cor'
Undefined global functions or variables:
  abline aov cor ecdf knots layout legend lines locator p.adjust par
  polygon qf rt t.test text
Consider adding
  importFrom("graphics", "abline", "layout", "legend", "lines",
             "locator", "par", "polygon", "text")
  importFrom("stats", "aov", "cor", "ecdf", "knots", "p.adjust", "qf",
             "rt", "t.test")
to your NAMESPACE file.
Package in Depends field not imported from: 'mnormt'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
catt.test: no visible global function definition for 'pnorm'
fnorm2: no visible global function definition for 'sadmvn'
fnorm3: no visible global function definition for 'sadmvn'
Undefined global functions or variables:
  pnorm sadmvn
Consider adding
  importFrom("stats", "pnorm")
to your NAMESPACE file.
Running examples in 'MazamaCoreUtils-Ex.R' failed
The error most likely occurred in:

> ### Name: html_getLinks
> ### Title: Find all links in an html page
> ### Aliases: html_getLinks html_getLinkNames html_getLinkUrls
> 
> ### ** Examples
> 
> library(MazamaCoreUtils)
> 
> # US Census 2019 shapefiles
> dataLinks <- html_getLinks("https://www2.census.gov/geo/tiger/GENZ2019/shp/")
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: html_getLinks ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'cache-management.Rmd' using rmarkdown
Quitting from lines 69-72 (cache-management.Rmd) 
Error: processing vignette 'cache-management.Rmd' failed with diagnostics:
DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'cache-management.Rmd'

--- re-building 'date-parsing.Rmd' using rmarkdown
--- finished re-building 'date-parsing.Rmd'

--- re-building 'error-handling.Rmd' using rmarkdown
--- finished re-building 'error-handling.Rmd'

--- re-building 'logging.Rmd' using rmarkdown
--- finished re-building 'logging.Rmd'

SUMMARY: processing the following file failed:
  'cache-management.Rmd'

Error: Vignette re-building failed.
Execution halted
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/MazamaLocationUtils.Rcheck/00install.out' for details.
Running 'testthat.R' [30s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(MazamaSpatialUtils)
  Loading required package: sp
  > 
  > test_check("MazamaSpatialUtils")
  -- 1. Error: summarizeByPolygon properly summarizes (@test-summarizePolygons.R#6
  DLL 'dplyr' not found: maybe not installed for this architecture?
  Backtrace:
    1. MazamaSpatialUtils::summarizeByPolygon(...)
    9. dplyr::group_by(., .data$polygonID)
   10. base::getExportedValue(pkg, name)
   11. base::asNamespace(ns)
   12. base::getNamespace(ns)
   13. base::loadNamespace(name)
   14. base::library.dynam(lib, package, package.lib)
  
  == testthat results  ===========================================================
  [ OK: 95 | SKIPPED: 26 | WARNINGS: 453 | FAILED: 1 ]
  1. Error: summarizeByPolygon properly summarizes (@test-summarizePolygons.R#6) 
  
  Error: testthat unit tests failed
  Execution halted
Package suggested but not available for checking: 'doMC'
Package vignette with placeholder title 'Vignette Title':
  'my-vignette.Rmd'
Malformed Description field: should contain one or more complete sentences.
MI.2: no visible global function definition for 'xtabs'
RNASeq.Data: no visible binding for global variable 'quantile'
loc.node: no visible global function definition for 'head'
loc.node: no visible global function definition for 'tail'
plotHybrid.Tree: no visible global function definition for 'par'
plotHybrid.Tree: no visible global function definition for 'text'
plotHybrid.Tree: no visible global function definition for 'image'
plotHybrid.Tree: no visible global function definition for 'grey'
plotHybrid.Tree: no visible global function definition for
  'heat.colors'
plotHybrid.Tree: no visible global function definition for 'head'
plotHybrid.Tree: no visible global function definition for 'segments'
plotbr: no visible global function definition for 'segments'
Undefined global functions or variables:
  grey head heat.colors image par quantile segments tail text xtabs
Consider adding
  importFrom("grDevices", "grey", "heat.colors")
  importFrom("graphics", "image", "par", "segments", "text")
  importFrom("stats", "quantile", "xtabs")
  importFrom("utils", "head", "tail")
to your NAMESPACE file.
Malformed Description field: should contain one or more complete sentences.
cfull: no visible global function definition for 'combn'
cl: no visible global function definition for 'combn'
cn: no visible global function definition for 'combn'
crep: no visible global function definition for 'combn'
crich: no visible global function definition for 'combn'
ct: no visible global function definition for 'combn'
mjaccard: no visible global function definition for 'combn'
ml: no visible global function definition for 'combn'
mn: no visible global function definition for 'combn'
mrep: no visible global function definition for 'combn'
mrich: no visible global function definition for 'combn'
msorensen: no visible global function definition for 'combn'
mt: no visible global function definition for 'combn'
wnodf: no visible global function definition for 'combn'
Undefined global functions or variables:
  combn
Consider adding
  importFrom("utils", "combn")
to your NAMESPACE file.
Running examples in 'MBNMAdose-Ex.R' failed
The error most likely occurred in:

> ### Name: MBNMAdose-package
> ### Title: MBNMAdose for dose-response Model-Based Network Meta-Analysis
> ### Aliases: MBNMAdose MBNMAdose-package
> ### Keywords: internal
> 
> ### ** Examples
> 
> # Generate an "mbnma.network" object that stores data in the correct format
> network <- mbnma.network(HF2PPITT)
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: mbnma.network ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'mbnmadose.Rmd' using rmarkdown
Quitting from lines 16-31 (mbnmadose.Rmd) 
Error: processing vignette 'mbnmadose.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'mbnmadose.Rmd'

SUMMARY: processing the following file failed:
  'mbnmadose.Rmd'

Error: Vignette re-building failed.
Execution halted
Running examples in 'MBNMAtime-Ex.R' failed
The error most likely occurred in:

> ### Name: add_index
> ### Title: Add follow-up time and arm indices to a dataset
> ### Aliases: add_index
> 
> ### ** Examples
> 
> # Add indices to osteoarthritis pain dataset
> data.ab <- add_index(osteopain)
Reference treatment is `Pl_0`
Error in library.dynam(lib, package, package.lib) : 
  DLL 'dplyr' not found: maybe not installed for this architecture?
Calls: add_index ... asNamespace -> getNamespace -> loadNamespace -> library.dynam
Execution halted
Error(s) in re-building vignettes:
--- re-building 'MBNMAtime.Rmd' using rmarkdown
Quitting from lines 14-27 (MBNMAtime.Rmd) 
Error: processing vignette 'MBNMAtime.Rmd' failed with diagnostics:
package or namespace load failed for 'dplyr' in library.dynam(lib, package, package.lib):
 DLL 'dplyr' not found: maybe not installed for this architecture?
--- failed re-building 'MBNMAtime.Rmd'

SUMMARY: processing the following file failed:
  'MBNMAtime.Rmd'

Error: Vignette re-building failed.
Execution halted
Malformed Title field: should not end in a period.
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.0/mcca.Rcheck/00install.out' for details.
Package in Depends field not imported from: 'lpSolve'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
laugreen: no visible global function definition for 'combn'
laugreen: no visible global function definition for 'lp'
maxpear: no visible global function definition for 'hclust'
maxpear: no visible global function definition for 'as.dist'
maxpear : <anonymous>: no visible global function definition for
  'cutree'
medv: no visible global function definition for 'cutree'
medv: no visible global function definition for 'hclust'
medv: no visible global function definition for 'as.dist'
minbinder: no visible global function definition for 'hclust'
minbinder: no visible global function definition for 'as.dist'
minbinder : <anonymous>: no visible global function definition for
  'cutree'
relabel : min.perm.labels: no visible global function definition for
  'lp.transport'
Undefined global functions or variables:
  as.dist combn cutree hclust lp lp.transport
Consider adding
  importFrom("stats", "as.dist", "cutree", "hclust")
  importFrom("utils", "combn")
to your NAMESPACE file.
getbetap.A: no visible global function definition for 'pbeta'
getbetap.A: no visible global function definition for 'cor.test'
Undefined global functions or variables:
  cor.test pbeta
Consider adding
  importFrom("stats", "cor.test", "pbeta")
to your NAMESPACE file.
Package suggested but not available for checking: 'cplexAPI'
installed size is  7.1Mb
  sub-directories of 1Mb or more:
    doc    3.8Mb
    libs   3.1Mb
Package in Depends field not imported from: 'coda'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
mcgibbsit: no visible global function definition for 'is.mcmc.list'
mcgibbsit: no visible global function definition for 'start'
mcgibbsit: no visible global function definition for 'end'
mcgibbsit: no visible global function definition for 'thin'
mcgibbsit: no visible global function definition for 'nvar'
mcgibbsit: no visible global function definition for 'mcmc'
mcgibbsit: no visible global function definition for 'mcmc.list'
mcgibbsit: no visible global function definition for 'varnames'
mcgibbsit: no visible global function definition for 'qnorm'
mcgibbsit: no visible global function definition for 'niter'
mcgibbsit: no visible global function definition for 'quantile'
mcgibbsit : to.table: no visible global function definition for
  'window'
mcgibbsit: no visible global function definition for 'var'
read.mcmc: no visible global function definition for 'mcmc.list'
read.mcmc: no visible global function definition for 'mcmc'
Undefined global functions or variables:
  end is.mcmc.list mcmc mcmc.list niter nvar qnorm quantile start thin
  var varnames window
Consider adding
  importFrom("stats", "end", "qnorm", "quantile", "start", "var",
             "window")
to your NAMESPACE file.
call_localoptim: no visible global function definition for 'optim'
call_localoptim: no visible global function definition for 'nlminb'
call_localoptim: no visible global function definition for
  'txtProgressBar'
call_localoptim: no visible global function definition for
  'setTxtProgressBar'
call_localoptim : <anonymous>: no visible global function definition
  for 'optim'
call_localoptim : <anonymous>: no visible global function definition
  for 'nlminb'
multiStartoptim: no visible global function definition for 'median'
Undefined global functions or variables:
  median nlminb optim setTxtProgressBar txtProgressBar
Consider adding
  importFrom("stats", "median", "nlminb", "optim")
  importFrom("utils", "setTxtProgressBar", "txtProgressBar")
to your NAMESPACE file.
mcheatmaps : coscolorFun: no visible global function definition for
  'rgb'
mcheatmaps : halfcmat: no visible global function definition for
  'order.dendrogram'
mcheatmaps : fullcmat: no visible global function definition for
  'order.dendrogram'
mcheatmaps : calculateDendrogram: no visible global function definition
  for 'hclust'
mcheatmaps : calculateDendrogram: no visible global function definition
  for 'as.dist'
mcheatmaps : calculateDendrogram: no visible global function definition
  for 'sd'
mcheatmaps : calculateDendrogram: no visible global function definition
  for 'cophenetic'
mcheatmaps : printDiag: no visible global function definition for
  'order.dendrogram'
mcheatmaps: no visible global function definition for 'strwidth'
mcheatmaps: no visible global function definition for 'pdf'
mcheatmaps: no visible global function definition for 'plot.new'
mcheatmaps: no visible global function definition for 'as.dendrogram'
mcheatmaps: no visible global function definition for 'reorder'
mcheatmaps: no visible global function definition for 'par'
mcheatmaps: no visible global function definition for
  'order.dendrogram'
mcheatmaps: no visible global function definition for 'heat.colors'
mcheatmaps: no visible global function definition for 'terrain.colors'
mcheatmaps: no visible global function definition for 'as.dist'
mcheatmaps: no visible global function definition for 'dev.off'
Undefined global functions or variables:
  as.dendrogram as.dist cophenetic dev.off hclust heat.colors
  order.dendrogram par pdf plot.new reorder rgb sd strwidth
  terrain.colors
Consider adding
  importFrom("grDevices", "dev.off", "heat.colors", "pdf", "rgb",
             "terrain.colors")
  importFrom("graphics", "par", "plot.new", "strwidth")
  importFrom("stats", "as.dendrogram", "as.dist", "cophenetic", "hclust",
             "order.dendrogram", "reorder", "sd")
to your NAMESPACE file.