Running ‘autoprint.R’
  Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK
  Running ‘froll.R’ [59s/159s]
  Running ‘knitr.R’
  Comparing ‘knitr.Rout’ to ‘knitr.Rout.save’ ... OK
  Running ‘main.R’ [262s/365s]
  Running ‘nafill.R’
  Running ‘other.R’
  Running ‘types.R’
Running the tests in ‘tests/main.R’ failed.
Complete output:
  > require(data.table)
  Loading required package: data.table
  > 
  > test.data.table()  # runs the main test suite of 5,000+ tests in /inst/tests/tests.Rraw
  getDTthreads(verbose=TRUE):
    omp_get_num_procs()            24
    R_DATATABLE_NUM_PROCS_PERCENT  unset (default 50)
    R_DATATABLE_NUM_THREADS        unset
    omp_get_thread_limit()         2
    omp_get_max_threads()          24
    OMP_THREAD_LIMIT               2
    OMP_NUM_THREADS                unset
    RestoreAfterFork               true
    data.table is using 2 threads. See ?setDTthreads.
  test.data.table() running: /data/gannet/ripley/R/packages/tests-clang/data.table.Rcheck/data.table/tests/tests.Rraw.bz2 
  Test 1390.3 produced 1 errors but expected 0
  Expected: 
  Observed: 'origin' must be supplied
  Test 1390.4 produced 1 errors but expected 0
  Expected: 
  Observed: 'origin' must be supplied
  Test 1390.5 produced 1 errors but expected 0
  Expected: 
  Observed: 'origin' must be supplied
  Test 1985.1 produced 1 errors but expected 0
  Expected: 
  Observed: 'origin' must be supplied
  Test 1993.1 produced 1 errors but expected 0
  Expected: 
  Observed: 'origin' must be supplied
  
  10 longest running tests took 138s (38% of 361s)
        ID   time nTest
   1: 1438 37.936   738
   2: 1223 16.275   728
   3: 1648 12.663    91
   4: 1437 11.781    36
   5: 1252 11.537   484
   6: 1642 10.725    91
   7: 1650 10.326    91
   8:  863 10.042     1
   9: 1652  8.755    91
  10:  894  8.557   360
  
  Error in test.data.table() : 
    5 errors out of 9662 in 00:06:02 elapsed (00:04:08 cpu) on Wed Jul 15 06:29:44 2020. [endian==little, sizeof(long double)==16, sizeof(pointer)==8, TZ=Europe/London, locale='LC_CTYPE=en_GB.utf8;LC_NUMERIC=C;LC_TIME=en_GB.UTF-8;LC_COLLATE=C;LC_MONETARY=en_GB.UTF-8;LC_MESSAGES=en_GB.UTF-8;LC_PAPER=en_GB.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_GB.UTF-8;LC_IDENTIFICATION=C', l10n_info()='MBCS=TRUE; UTF-8=TRUE; Latin-1=FALSE', getDTthreads()='omp_get_num_procs()==24; R_DATATABLE_NUM_PROCS_PERCENT==unset (default 50); R_DATATABLE_NUM_THREADS==unset; omp_get_thread_limit()==2; omp_get_max_threads()==24; OMP_THREAD_LIMIT==2; OMP_NUM_THREADS==unset; RestoreAfterFork==true; data.table is using 2 threads. See ?setDTthreads.']. Search tests/tests.Rraw.bz2 for test numbers: 1390.3, 1390.4, 1390.5, 1985.1, 1993.1.
  Execution halted