Error(s) in re-building vignettes:
  ...
--- re-building ‘chytrid_dede_example.Rmd’ using rmarkdown
Loading required package: deSolve
The magick package is required to crop "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deBInfer.Rcheck/vign_test/deBInfer/vignettes/chytrid_dede_example_files/figure-latex/data-1.png" but not available.
Order of initial conditions is  C, S, Z
initial posterior probability = -13968.8205931737
The magick package is required to crop "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deBInfer.Rcheck/vign_test/deBInfer/vignettes/chytrid_dede_example_files/figure-latex/unnamed-chunk-1-1.png" but not available.
The magick package is required to crop "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deBInfer.Rcheck/vign_test/deBInfer/vignettes/chytrid_dede_example_files/figure-latex/unnamed-chunk-2-1.png" but not available.
The magick package is required to crop "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deBInfer.Rcheck/vign_test/deBInfer/vignettes/chytrid_dede_example_files/figure-latex/unnamed-chunk-2-2.png" but not available.
The magick package is required to crop "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deBInfer.Rcheck/vign_test/deBInfer/vignettes/chytrid_dede_example_files/figure-latex/unnamed-chunk-3-1.png" but not available.
The magick package is required to crop "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deBInfer.Rcheck/vign_test/deBInfer/vignettes/chytrid_dede_example_files/figure-latex/post-sims-plot-1.png" but not available.
The magick package is required to crop "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deBInfer.Rcheck/vign_test/deBInfer/vignettes/chytrid_dede_example_files/figure-latex/post-sims-ensemble-1.png" but not available.
The magick package is required to crop "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deBInfer.Rcheck/vign_test/deBInfer/vignettes/chytrid_dede_example_files/figure-latex/custom-sim-fig-1.png" but not available.
pandoc-citeproc: Error in $: Incompatible API versions: encoded with [1,20] but attempted to decode with [1,17,5,4].
CallStack (from HasCallStack):
  error, called at ./Text/Pandoc/JSON.hs:111:48 in pandoc-types-1.17.5.4-5tHZ3B61A58JaKOMxwGQR4:Text.Pandoc.JSON
Error running filter /usr/bin/pandoc-citeproc:
Filter returned error status 1
Error: processing vignette 'chytrid_dede_example.Rmd' failed with diagnostics:
pandoc document conversion failed with error 83
--- failed re-building ‘chytrid_dede_example.Rmd’

--- re-building ‘logistic_ode_example.Rmd’ using rmarkdown
Loading required package: deSolve
The magick package is required to crop "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deBInfer.Rcheck/vign_test/deBInfer/vignettes/logistic_ode_example_files/figure-latex/unnamed-chunk-1-1.png" but not available.
The magick package is required to crop "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deBInfer.Rcheck/vign_test/deBInfer/vignettes/logistic_ode_example_files/figure-latex/unnamed-chunk-3-1.png" but not available.
Order of initial conditions is  N
initial posterior probability = -7868.61983481059
The magick package is required to crop "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deBInfer.Rcheck/vign_test/deBInfer/vignettes/logistic_ode_example_files/figure-latex/unnamed-chunk-4-1.png" but not available.
The magick package is required to crop "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deBInfer.Rcheck/vign_test/deBInfer/vignettes/logistic_ode_example_files/figure-latex/unnamed-chunk-5-1.png" but not available.
The magick package is required to crop "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deBInfer.Rcheck/vign_test/deBInfer/vignettes/logistic_ode_example_files/figure-latex/post-dens-1.png" but not available.
The magick package is required to crop "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deBInfer.Rcheck/vign_test/deBInfer/vignettes/logistic_ode_example_files/figure-latex/post-sims-plot-1.png" but not available.
The magick package is required to crop "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/deBInfer.Rcheck/vign_test/deBInfer/vignettes/logistic_ode_example_files/figure-latex/post-sims-ensemble-1.png" but not available.
pandoc-citeproc: Error in $: Incompatible API versions: encoded with [1,20] but attempted to decode with [1,17,5,4].
CallStack (from HasCallStack):
  error, called at ./Text/Pandoc/JSON.hs:111:48 in pandoc-types-1.17.5.4-5tHZ3B61A58JaKOMxwGQR4:Text.Pandoc.JSON
Error running filter /usr/bin/pandoc-citeproc:
Filter returned error status 1
Error: processing vignette 'logistic_ode_example.Rmd' failed with diagnostics:
pandoc document conversion failed with error 83
--- failed re-building ‘logistic_ode_example.Rmd’

--- re-building ‘deBInfer_compiled_code.pdf.asis’ using asis
--- finished re-building ‘deBInfer_compiled_code.pdf.asis’

SUMMARY: processing the following files failed:
  ‘chytrid_dede_example.Rmd’ ‘logistic_ode_example.Rmd’

Error: Vignette re-building failed.
Execution halted