Found the following significant warnings:
  Rd warning: /home/hornik/tmp/scratch/Rtmp8gn0r7/R.INSTALL45a2ae84550/geiger/man/geiger-defunct.Rd:46: file link ‘rescale.phylo’ in package ‘geiger’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp8gn0r7/R.INSTALL45a2ae84550/geiger/man/geiger-defunct.Rd:47: file link ‘disparity’ in package ‘geiger’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp8gn0r7/R.INSTALL45a2ae84550/geiger/man/geiger-defunct.Rd:49: file link ‘rescale.phylo’ in package ‘geiger’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp8gn0r7/R.INSTALL45a2ae84550/geiger/man/geiger-defunct.Rd:54: file link ‘rescale.phylo’ in package ‘geiger’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp8gn0r7/R.INSTALL45a2ae84550/geiger/man/geiger-defunct.Rd:55: file link ‘rescale.phylo’ in package ‘geiger’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp8gn0r7/R.INSTALL45a2ae84550/geiger/man/geiger-defunct.Rd:56: file link ‘rescale.phylo’ in package ‘geiger’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp8gn0r7/R.INSTALL45a2ae84550/geiger/man/geiger-defunct.Rd:60: file link ‘rescale.phylo’ in package ‘geiger’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp8gn0r7/R.INSTALL45a2ae84550/geiger/man/geiger-defunct.Rd:63: file link ‘load’ in package ‘geiger’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp8gn0r7/R.INSTALL45a2ae84550/geiger/man/geiger-defunct.Rd:65: file link ‘drop.random’ in package ‘geiger’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp8gn0r7/R.INSTALL45a2ae84550/geiger/man/geiger-defunct.Rd:66: file link ‘bd.km’ in package ‘geiger’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp8gn0r7/R.INSTALL45a2ae84550/geiger/man/geiger-defunct.Rd:67: file link ‘rescale.phylo’ in package ‘geiger’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp8gn0r7/R.INSTALL45a2ae84550/geiger/man/geiger-defunct.Rd:70: file link ‘rescale.phylo’ in package ‘geiger’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp8gn0r7/R.INSTALL45a2ae84550/geiger/man/geiger-defunct.Rd:71: file link ‘disparity’ in package ‘geiger’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp8gn0r7/R.INSTALL45a2ae84550/geiger/man/geiger-defunct.Rd:73: file link ‘rescale.phylo’ in package ‘geiger’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp8gn0r7/R.INSTALL45a2ae84550/geiger/man/geiger-defunct.Rd:74: file link ‘rescale.phylo’ in package ‘geiger’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp8gn0r7/R.INSTALL45a2ae84550/geiger/man/ratematrix.Rd:14: file link ‘rescale.phylo’ in package ‘geiger’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp8gn0r7/R.INSTALL45a2ae84550/geiger/man/sim.bd.Rd:21: file link ‘bd.km’ in package ‘geiger’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp8gn0r7/R.INSTALL45a2ae84550/geiger/man/sim.bd.Rd:31: file link ‘bd.km’ in package ‘geiger’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp8gn0r7/R.INSTALL45a2ae84550/geiger/man/sim.bdtree.Rd:36: file link ‘rbdtree’ in package ‘ape’ does not exist and so has been treated as a topic
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/geiger.Rcheck/00install.out’ for details.