Found the following significant warnings:
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/ArrayParameter-class.Rd:38: file link ‘shiny’ in package ‘shiny’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/ArrayParameter-class.Rd:92: file link ‘shiny’ in package ‘shiny’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/Collection-class.Rd:89: file link ‘div’ in package ‘shiny’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/ConservationModifier-class.Rd:123: file link ‘div’ in package ‘shiny’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/ConservationProblem-class.Rd:163: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/MiscParameter-class.Rd:75: file link ‘shiny’ in package ‘shiny’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/Parameter-class.Rd:34: file link ‘shiny’ in package ‘shiny’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/Parameters-class.Rd:85: file link ‘div’ in package ‘shiny’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/ScalarParameter-class.Rd:33: file link ‘shiny’ in package ‘shiny’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/ScalarParameter-class.Rd:83: file link ‘shiny’ in package ‘shiny’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/add_locked_in_constraints.Rd:98: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/add_locked_in_constraints.Rd:101: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/add_locked_in_constraints.Rd:104: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/add_locked_out_constraints.Rd:97: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/add_locked_out_constraints.Rd:100: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/add_locked_out_constraints.Rd:103: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/adjacency_matrix.Rd:28: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/adjacency_matrix.Rd:37: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/adjacency_matrix.Rd:59: file link ‘st_intersects’ in package ‘sf’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/adjacency_matrix.Rd:61: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/adjacency_matrix.Rd:49: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/binary_stack.Rd:16: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/binary_stack.Rd:17: file link ‘RasterStack-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/binary_stack.Rd:10: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/binary_stack.Rd:26: file link ‘RasterStack-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/binary_stack.Rd:13: file link ‘RasterStack-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/boundary_matrix.Rd:28: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/boundary_matrix.Rd:32: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/boundary_matrix.Rd:38: file link ‘gUnarySTRtreeQuery’ in package ‘rgeos’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/boundary_matrix.Rd:43: file link ‘SpatialPolygonsDataFrame’ in package ‘sp’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/boundary_matrix.Rd:67: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/branch_matrix.Rd:16: file link ‘phylo’ in package ‘ape’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/category_layer.Rd:17: file link ‘RasterStack-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/category_layer.Rd:20: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/category_layer.Rd:10: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/category_layer.Rd:14: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/category_vector.Rd:34: file link ‘max.col’ in package ‘base’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/category_vector.Rd:53: file link ‘max.col’ in package ‘base’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/connectivity_matrix.Rd:25: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/connectivity_matrix.Rd:30: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/connectivity_matrix.Rd:33: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/connectivity_matrix.Rd:57: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/fast_extract.Rd:43: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/fast_extract.Rd:25: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/feature_representation.Rd:31: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/feature_representation.Rd:72: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/feature_representation.Rd:73: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/ferrier_score.Rd:28: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/ferrier_score.Rd:56: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/ferrier_score.Rd:58: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/ferrier_score.Rd:33: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/pipe.Rd:30: file link ‘%>%’ in package ‘magrittr’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/problem.Rd:55: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/problem.Rd:76: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/problem.Rd:79: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/problem.Rd:123: file link ‘RasterStack-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/problem.Rd:124: file link ‘RasterBrick-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/proximity_matrix.Rd:28: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/proximity_matrix.Rd:53: file link ‘st_is_within_distance’ in package ‘sf’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/proximity_matrix.Rd:44: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/rarity_weighted_richness.Rd:31: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/rarity_weighted_richness.Rd:82: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/rarity_weighted_richness.Rd:84: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/rarity_weighted_richness.Rd:43: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/replacement_cost.Rd:31: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/replacement_cost.Rd:99: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/replacement_cost.Rd:101: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/replacement_cost.Rd:56: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/rij_matrix.Rd:19: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/rij_matrix.Rd:23: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/rij_matrix.Rd:49: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/rij_matrix.Rd:50: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/scalar_parameters.Rd:49: file link ‘shiny’ in package ‘shiny’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/sim_data.Rd:38: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/sim_data.Rd:40: file link ‘RasterStack-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/sim_data.Rd:42: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/sim_data.Rd:45: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/sim_data.Rd:48: file link ‘RasterStack-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/sim_data.Rd:52: file link ‘phylo’ in package ‘ape’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/simulate_cost.Rd:17: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/simulate_cost.Rd:31: file link ‘RasterStack-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/simulate_data.Rd:10: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/simulate_data.Rd:24: file link ‘RasterStack-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/simulate_species.Rd:16: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/simulate_species.Rd:30: file link ‘RasterStack-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/solve.Rd:68: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/solve.Rd:72: file link ‘RasterStack-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/solve.Rd:33: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/tee.Rd:36: file link ‘%T>%’ in package ‘magrittr’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/zones.Rd:39: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/Rtmp9pRuYG/R.INSTALL69b9616f87b4/prioritizr/man/zones.Rd:40: file link ‘Raster-class’ in package ‘raster’ does not exist and so has been treated as a topic
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/prioritizr.Rcheck/00install.out’ for details.