Found the following significant warnings:
  Rd warning: /home/hornik/tmp/scratch/RtmphziQHR/R.INSTALL23e376c71a77/raptr/man/RapData.Rd:92: file link ‘SpatialPointsDataFrame’ in package ‘sp’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmphziQHR/R.INSTALL23e376c71a77/raptr/man/SpatialPolygons2PolySet.Rd:31: file link ‘SpatialPolygonsDataFrame’ in package ‘sp’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmphziQHR/R.INSTALL23e376c71a77/raptr/man/SpatialPolygons2PolySet.Rd:19: file link ‘SpatialPolygonsDataFrame’ in package ‘sp’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmphziQHR/R.INSTALL23e376c71a77/raptr/man/calcBoundaryData.Rd:37: file link ‘SpatialPolygonsDataFrame’ in package ‘sp’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmphziQHR/R.INSTALL23e376c71a77/raptr/man/calcBoundaryData.Rd:42: file link ‘SpatialPolygonsDataFrame’ in package ‘sp’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmphziQHR/R.INSTALL23e376c71a77/raptr/man/calcBoundaryData.Rd:20: file link ‘SpatialPolygonsDataFrame’ in package ‘sp’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmphziQHR/R.INSTALL23e376c71a77/raptr/man/calcSpeciesAverageInPus.Rd:20: file link ‘SpatialPolygonsDataFrame’ in package ‘sp’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmphziQHR/R.INSTALL23e376c71a77/raptr/man/calcSpeciesAverageInPus.Rd:24: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmphziQHR/R.INSTALL23e376c71a77/raptr/man/calcSpeciesAverageInPus.Rd:25: file link ‘RasterStack-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmphziQHR/R.INSTALL23e376c71a77/raptr/man/calcSpeciesAverageInPus.Rd:26: file link ‘RasterBrick-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmphziQHR/R.INSTALL23e376c71a77/raptr/man/calcSpeciesAverageInPus.Rd:39: file link ‘SpatialPolygonsDataFrame’ in package ‘sp’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmphziQHR/R.INSTALL23e376c71a77/raptr/man/casestudy_data.Rd:10: file link ‘SpatialPolygonsDataFrame’ in package ‘sp’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmphziQHR/R.INSTALL23e376c71a77/raptr/man/casestudy_data.Rd:10: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmphziQHR/R.INSTALL23e376c71a77/raptr/man/casestudy_data.Rd:10: file link ‘RasterStack-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmphziQHR/R.INSTALL23e376c71a77/raptr/man/casestudy_data.Rd:25: file link ‘SpatialPolygonsDataFrame’ in package ‘sp’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmphziQHR/R.INSTALL23e376c71a77/raptr/man/casestudy_data.Rd:37: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmphziQHR/R.INSTALL23e376c71a77/raptr/man/make.RapData.Rd:41: file link ‘SpatialPointsDataFrame’ in package ‘sp’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmphziQHR/R.INSTALL23e376c71a77/raptr/man/plot.Rd:54: file link ‘brewer.pal’ in package ‘RColorBrewer’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmphziQHR/R.INSTALL23e376c71a77/raptr/man/rasterizeGDAL.Rd:10: file link ‘SpatialPolygonsDataFrame’ in package ‘sp’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmphziQHR/R.INSTALL23e376c71a77/raptr/man/sim.species.Rd:19: file link ‘RasterLayer-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmphziQHR/R.INSTALL23e376c71a77/raptr/man/simulated_data.Rd:9: file link ‘SpatialPolygonsDataFrame’ in package ‘sp’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmphziQHR/R.INSTALL23e376c71a77/raptr/man/simulated_data.Rd:10: file link ‘RasterStack-class’ in package ‘raster’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmphziQHR/R.INSTALL23e376c71a77/raptr/man/space.plot.Rd:37: file link ‘brewer.pal’ in package ‘RColorBrewer’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmphziQHR/R.INSTALL23e376c71a77/raptr/man/spp.plot.Rd:40: file link ‘brewer.pal’ in package ‘RColorBrewer’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmphziQHR/R.INSTALL23e376c71a77/raptr/man/spp.plot.Rd:43: file link ‘brewer.pal’ in package ‘RColorBrewer’ does not exist and so has been treated as a topic
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/raptr.Rcheck/00install.out’ for details.