Found the following significant warnings:
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/accumresult.Rd:43: file link ‘plot’ in package ‘graphics’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/accumresult.Rd:44: file link ‘plot’ in package ‘graphics’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/disttransform.Rd:8: file link ‘coverscale’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/disttransform.Rd:25: file link ‘coverscale’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.Rd:235: file link ‘tryCatch’ in package ‘base’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.Rd:287: file link ‘predict.maxnet’ in package ‘maxnet’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.Rd:288: file link ‘predict.maxnet’ in package ‘maxnet’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.Rd:333: file link ‘get.block’ in package ‘ENMeval’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.Rd:334: file link ‘get.block’ in package ‘ENMeval’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.Rd:335: file link ‘get.block’ in package ‘ENMeval’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.Rd:350: file link ‘round’ in package ‘base’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.analogue.Rd:40: file link ‘tryCatch’ in package ‘base’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.analogue.Rd:47: file link ‘cov’ in package ‘stats’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.batch.Rd:106: file link ‘get.block’ in package ‘ENMeval’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.batch.Rd:107: file link ‘get.block’ in package ‘ENMeval’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.batch.Rd:108: file link ‘get.block’ in package ‘ENMeval’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.batch.Rd:115: file link ‘ensemble.VIF’ in package ‘BiodiversityR’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.batch.Rd:116: file link ‘ensemble.VIF’ in package ‘BiodiversityR’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.batch.Rd:118: file link ‘tryCatch’ in package ‘base’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.batch.Rd:170: file link ‘predict.maxnet’ in package ‘maxnet’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.batch.Rd:171: file link ‘predict.maxnet’ in package ‘maxnet’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.batch.Rd:229: file link ‘dev.new’ in package ‘grDevices’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.batch.Rd:230: file link ‘dev.new’ in package ‘grDevices’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.bioclim.Rd:35: file link ‘tryCatch’ in package ‘base’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.bioclim.Rd:47: file link ‘qnorm’ in package ‘stats’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.bioclim.graph.Rd:8: file link ‘ensemble.bioclim.object’ in package ‘BiodiversityR’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.ecocrop.Rd:36: file link ‘tryCatch’ in package ‘base’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.ecocrop.Rd:49: file link ‘getCrop’ in package ‘dismo’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.novel.Rd:36: file link ‘tryCatch’ in package ‘base’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.raster.Rd:60: file link ‘tryCatch’ in package ‘base’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.raster.Rd:68: file link ‘areaPolygon’ in package ‘geosphere’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.raster.Rd:76: file link ‘trunc’ in package ‘base’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.raster.Rd:84: file link ‘areaPolygon’ in package ‘geosphere’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.red.Rd:32: file link ‘gBuffer’ in package ‘rgeos’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.spatialThin.Rd:67: file link ‘rda’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.spatialThin.Rd:69: file link ‘rda’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.zones.Rd:10: file link ‘rda’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.zones.Rd:41: file link ‘tryCatch’ in package ‘base’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.zones.Rd:44: file link ‘rda’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.zones.Rd:50: file link ‘dev.new’ in package ‘grDevices’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.zones.Rd:51: file link ‘dev.new’ in package ‘grDevices’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ensemble.zones.Rd:57: file link ‘cov’ in package ‘stats’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/evaluation.strip.Rd:31: file link ‘tryCatch’ in package ‘base’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/evaluation.strip.Rd:37: file link ‘dev.new’ in package ‘grDevices’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/evaluation.strip.Rd:38: file link ‘dev.new’ in package ‘grDevices’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/evaluation.strip.Rd:39: file link ‘plot’ in package ‘graphics’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/multiconstrained.Rd:7: file link ‘dbrda’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/ordicoeno.Rd:21: file link ‘plot’ in package ‘graphics’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/radfitresult.Rd:30: file link ‘prestonfit’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/rankabundance.Rd:38: file link ‘plot’ in package ‘graphics’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/rankabundance.Rd:46: file link ‘plot’ in package ‘graphics’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpMDQrgB/R.INSTALL3a3059a55069/BiodiversityR/man/renyiresult.Rd:55: file link ‘plot’ in package ‘graphics’ does not exist and so has been treated as a topic
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/BiodiversityR.Rcheck/00install.out’ for details.