Found the following significant warnings:
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/ordiplot3d.Rd:58: file link ‘rda’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/ordirgl.Rd:56: file link ‘rgl.texts’ in package ‘rgl’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/ordirgl.Rd:89: file link ‘rgl’ in package ‘rgl’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/ordirgl.Rd:100: file link ‘rgl.spheres’ in package ‘rgl’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/ordirgl.Rd:101: file link ‘rgl.texts’ in package ‘rgl’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/ordirgl.Rd:103: file link ‘rgl.material’ in package ‘rgl’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/ordirgl.Rd:105: file link ‘rgl.spheres’ in package ‘rgl’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/ordirgl.Rd:110: file link ‘rda’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/ordirgl.Rd:122: file link ‘ordisegments’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/ordirgl.Rd:128: file link ‘ordispider’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/ordirgl.Rd:133: file link ‘ordiellipse’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/ordirgl.Rd:142: file link ‘lines.spantree’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/ordirgl.Rd:145: file link ‘ordicluster’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/ordirgl.Rd:162: file link ‘rgl’ in package ‘rgl’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/ordirgl.Rd:168: file link ‘rgl’ in package ‘rgl’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/ordirgl.Rd:168: file link ‘rgl.spheres’ in package ‘rgl’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/ordirgl.Rd:169: file link ‘rgl.texts’ in package ‘rgl’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/ordirgl.Rd:169: file link ‘rgl.viewpoint’ in package ‘rgl’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/ordirgl.Rd:172: file link ‘ordisegments’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/ordirgl.Rd:172: file link ‘ordispider’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/ordirgl.Rd:173: file link ‘ordiellipse’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/ordirgl.Rd:174: file link ‘ordicluster’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/ordirgl.Rd:175: file link ‘lines.spantree’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/orditree3d.Rd:85: file link ‘ordicluster’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/rgl.renyiaccum.Rd:9: file link ‘renyiaccum’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/rgl.renyiaccum.Rd:10: file link ‘persp.renyiaccum’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/rgl.renyiaccum.Rd:19: file link ‘renyiaccum’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/rgl.renyiaccum.Rd:29: file link ‘renyiaccum’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/rgl.renyiaccum.Rd:31: file link ‘persp.renyiaccum’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/rgl.renyiaccum.Rd:42: file link ‘renyiaccum’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/rgl.renyiaccum.Rd:42: file link ‘persp.renyiaccum’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpzBMskg/R.INSTALL5ad2516511b/vegan3d/man/rgl.renyiaccum.Rd:43: file link ‘rgl’ in package ‘rgl’ does not exist and so has been treated as a topic
  Rd warning: /tmp/RtmpZp7ze4/Rbuild29bb463cd75b/vegan3d/man/vegan3d-package.Rd:30: file link ‘rgl.material’ in package ‘rgl’ does not exist and so has been treated as a topic
  Rd warning: /tmp/RtmpZp7ze4/Rbuild29bb463cd75b/vegan3d/man/vegan3d-package.Rd:42: file link ‘ordiellipse’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /tmp/RtmpZp7ze4/Rbuild29bb463cd75b/vegan3d/man/vegan3d-package.Rd:50: file link ‘renyiaccum’ in package ‘vegan’ does not exist and so has been treated as a topic
  Rd warning: /tmp/RtmpZp7ze4/Rbuild29bb463cd75b/vegan3d/man/vegan3d-package.Rd:68: file link ‘ordiellipse’ in package ‘vegan’ does not exist and so has been treated as a topic
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/vegan3d.Rcheck/00install.out’ for details.