Found the following significant warnings:
  Rd warning: /home/hornik/tmp/scratch/RtmpuFIAxv/R.INSTALL539a735df057/Signac/man/AddMotifObject.Rd:27: file link ‘Seurat’ in package ‘Seurat’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpuFIAxv/R.INSTALL539a735df057/Signac/man/BinarizeCounts.Rd:29: file link ‘Seurat’ in package ‘Seurat’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpuFIAxv/R.INSTALL539a735df057/Signac/man/CountsInRegion.Rd:19: file link ‘findOverlaps’ in package ‘IRanges’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpuFIAxv/R.INSTALL539a735df057/Signac/man/DepthCor.Rd:10: file link ‘Seurat’ in package ‘Seurat’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpuFIAxv/R.INSTALL539a735df057/Signac/man/DownsampleFeatures.Rd:19: file link ‘Seurat’ in package ‘Seurat’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpuFIAxv/R.INSTALL539a735df057/Signac/man/Extend.Rd:21: file link ‘GRanges’ in package ‘GenomicRanges’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpuFIAxv/R.INSTALL539a735df057/Signac/man/FRiP.Rd:22: file link ‘Seurat’ in package ‘Seurat’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpuFIAxv/R.INSTALL539a735df057/Signac/man/FindTopFeatures.Rd:37: file link ‘Seurat’ in package ‘Seurat’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpuFIAxv/R.INSTALL539a735df057/Signac/man/GenomeBinMatrix.Rd:22: file link ‘seqlengths’ in package ‘GenomeInfoDb’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpuFIAxv/R.INSTALL539a735df057/Signac/man/GetMotifData.Rd:28: file link ‘Seurat’ in package ‘Seurat’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpuFIAxv/R.INSTALL539a735df057/Signac/man/IntersectMatrix.Rd:33: file link ‘findOverlaps’ in package ‘IRanges’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpuFIAxv/R.INSTALL539a735df057/Signac/man/MergeWithRegions.Rd:57: file link ‘Seurat’ in package ‘Seurat’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpuFIAxv/R.INSTALL539a735df057/Signac/man/NucleosomeSignal.Rd:35: file link ‘Seurat’ in package ‘Seurat’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpuFIAxv/R.INSTALL539a735df057/Signac/man/RunChromVAR.Rd:40: file link ‘Seurat’ in package ‘Seurat’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpuFIAxv/R.INSTALL539a735df057/Signac/man/RunSVD.Rd:76: file link ‘Seurat’ in package ‘Seurat’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpuFIAxv/R.INSTALL539a735df057/Signac/man/RunTFIDF.Rd:61: file link ‘Seurat’ in package ‘Seurat’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpuFIAxv/R.INSTALL539a735df057/Signac/man/SetMotifData.Rd:30: file link ‘Seurat’ in package ‘Seurat’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpuFIAxv/R.INSTALL539a735df057/Signac/man/TSSEnrichment.Rd:28: file link ‘Seurat’ in package ‘Seurat’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpuFIAxv/R.INSTALL539a735df057/Signac/man/TSSPlot.Rd:21: file link ‘ggplot2’ in package ‘ggplot2’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpuFIAxv/R.INSTALL539a735df057/Signac/man/UnifyPeaks.Rd:14: file link ‘reduce’ in package ‘GenomicRanges’ does not exist and so has been treated as a topic
  Rd warning: /home/hornik/tmp/scratch/RtmpuFIAxv/R.INSTALL539a735df057/Signac/man/UnifyPeaks.Rd:15: file link ‘disjoin’ in package ‘GenomicRanges’ does not exist and so has been treated as a topic
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/Signac.Rcheck/00install.out’ for details.