Running ‘Rgui.R’
  Running ‘arules.R’
  Comparing ‘arules.Rout’ to ‘arules.Rout.save’ ... OK
  Running ‘idlists.R’
  Running ‘makebin.R’
  Comparing ‘makebin.Rout’ to ‘makebin.Rout.save’ ... OK
  Running ‘native.R’
  Comparing ‘native.Rout’ to ‘native.Rout.save’ ... OK
  Running ‘ptree.R’
  Running ‘similarity.R’
  Running ‘zaki.R’
Running the tests in ‘tests/idlists.R’ failed.
Complete output:
  > 
  > ### ceeboo 2015
  > 
  > library("arulesSequences")
  Loading required package: arules
  Loading required package: Matrix
  
  Attaching package: 'arules'
  
  The following objects are masked from 'package:base':
  
      abbreviate, write
  
  > 
  > .string2sequences <-
  + function(x) {
  +     x <- lapply(strsplit(x, split = " "), strsplit, split = "")
  +     x <- unlist(x, recursive = FALSE)
  +     as(x, "sequences")
  + }
  > 
  > ## repeating
  > t <- paste(
  +     1, 
  +     c(10, 15, 18, 19), 
  +     c("A", "A", "A", "A"),
  +     collapse = "\n"
  + )
  > t <- textConnection(t)
  > t <- read_baskets(t, info = c("sequenceID", "eventID"))
  Error in validObject(.Object) : 
    invalid class "ngCMatrix" object: invalid object for slot "i" in class "ngCMatrix": got class "logical", should be or extend class "integer"
  Calls: read_baskets ... initialize -> callNextMethod -> .nextMethod -> validObject
  In addition: Warning message:
  In Ops.factor(c(i), 1L) : '-' not meaningful for factors
  Execution halted
Running the tests in ‘tests/ptree.R’ failed.
Complete output:
  > 
  > ### ceeboo 2015
  > 
  > library("arulesSequences")
  Loading required package: arules
  Loading required package: Matrix
  
  Attaching package: 'arules'
  
  The following objects are masked from 'package:base':
  
      abbreviate, write
  
  > 
  > ## use example
  > data(zaki)
  > ## IGNORE_RDIFF_BEGIN
  > s7 <- cspade(zaki, parameter = list(support = .25), 
  + 	           control   = list(verbose = TRUE, tidLists = TRUE))
  
  parameter specification:
  support : 0.25
  maxsize :   10
  maxlen  :   10
  
  algorithmic control:
  bfstype  : FALSE
  verbose  :  TRUE
  summary  : FALSE
  tidLists :  TRUE
  
  preprocessing ... 1 partition(s), 0 MB [0.053s]
  mining transactions ... 0.11 MB [0.056s]
  reading sequences ... [2.1s]
  
  total elapsed time: 2.203s
  > ## IGNORE_RDIFF_END
  > 
  > ## IGNORE_RDIFF_BEGIN
  > k <- support(s7, zaki, control = list(verbose = TRUE))
  preprocessing ... Error in validObject(.Object) : 
    invalid class "ngCMatrix" object: invalid object for slot "i" in class "ngCMatrix": got class "logical", should be or extend class "integer"
  Calls: support ... initialize -> callNextMethod -> .nextMethod -> validObject
  In addition: Warning message:
  In Ops.factor(c(t), 1L) : '-' not meaningful for factors
  Execution halted
Running the tests in ‘tests/similarity.R’ failed.
Complete output:
  > 
  > library("arulesSequences")
  Loading required package: arules
  Loading required package: Matrix
  
  Attaching package: 'arules'
  
  The following objects are masked from 'package:base':
  
      abbreviate, write
  
  > 
  > ### ceeboo 2008, 2016
  > 
  > data(zaki)
  > 
  > z <- as(zaki, "timedsequences")
  Error in validObject(.Object) : 
    invalid class "ngCMatrix" object: invalid object for slot "i" in class "ngCMatrix": got class "logical", should be or extend class "integer"
  Calls: as ... initialize -> callNextMethod -> .nextMethod -> validObject
  In addition: Warning message:
  In Ops.factor(c(t), 1L) : '-' not meaningful for factors
  Execution halted
Running the tests in ‘tests/zaki.R’ failed.
Complete output:
  > 
  > library("arulesSequences")
  Loading required package: arules
  Loading required package: Matrix
  
  Attaching package: 'arules'
  
  The following objects are masked from 'package:base':
  
      abbreviate, write
  
  > 
  > ## basic tests using the small running 
  > ## example from the paper. 
  > ##
  > ## ceeboo 2007, 2014, 2015, 2016
  > 
  > ## data set
  > 
  > data(zaki)
  > 
  > zaki.txt <- 
  +     read_baskets(con  = system.file("misc", "zaki.txt", 
  +                                     package = "arulesSequences"),
  +                  info = c("sequenceID","eventID","SIZE"))
  Error in validObject(.Object) : 
    invalid class "ngCMatrix" object: invalid object for slot "i" in class "ngCMatrix": got class "logical", should be or extend class "integer"
  Calls: read_baskets ... initialize -> callNextMethod -> .nextMethod -> validObject
  In addition: Warning message:
  In Ops.factor(c(i), 1L) : '-' not meaningful for factors
  Execution halted