Error(s) in re-building vignettes:
--- re-building ‘mapmisc.Rnw’ using knitr
Loading required package: sp
Loading required package: raster
map images will be cached in  /Volumes/Temp/tmp/RtmpnmA2fX/mapmiscCache
--- finished re-building ‘mapmisc.Rnw’

--- re-building ‘north.Rmd’ using docco_linear
Quitting from lines 221-238 (north.Rmd) 
Error: processing vignette 'north.Rmd' failed with diagnostics:
unable to find an inherited method for function 'coordinates' for signature '"numeric"'
--- failed re-building ‘north.Rmd’

pandoc --self-contained --to=html5 --css=http://diseasemapping.r-forge.r-project.org/webpage.css --output=north.html north.md	
[WARNING] This document format requires a nonempty <title> element.
  Please specify either 'title' or 'pagetitle' in the metadata,
  e.g. by using --metadata pagetitle="..." on the command line.
  Falling back to 'north'
xelatex -interaction=nonstopmode mapmisc.tex;
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[1]
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[]\TU/lmtt/m/n/12 ## [1] "+init=epsg:28992 +proj=sterea +lat_0=52.1561605555555
5 +lon_0=5.38763888888889 +k=0.9999079 +x_0=155000 +y_0=463000 +ellps=bessel +t
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[]\TU/lmr/m/n/12 Maps which can be downloaded are shown at []$[][][][] [] [] []
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[][]\TU/lmtt/b/n/12 plot[][]\TU/lmtt/m/n/12 (nldElev,[][]add[][]=[][]TRUE[][],[
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[3] [4] [5] [6] [7] [8] (./mapmisc.aux)

Package rerunfilecheck Warning: File `mapmisc.out' has changed.
(rerunfilecheck)                Rerun to get outlines right
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LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right.

 )
(see the transcript file for additional information)
Output written on mapmisc.pdf (8 pages).
Transcript written on mapmisc.log.
xelatex -interaction=nonstopmode mapmisc.tex
This is XeTeX, Version 3.14159265-2.6-0.999991 (TeX Live 2019) (preloaded format=xelatex)
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entering extended mode
(./mapmisc.tex
LaTeX2e <2018-12-01>
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Document Class: article 2018/09/03 v1.4i Standard LaTeX document class
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[1]
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5 +lon_0=5.38763888888889 +k=0.9999079 +x_0=155000 +y_0=463000 +ellps=bessel +t
owgs84=565.2369,50.0087,465.658,-0.406857,0.350733,-1.87035,4.0812 +units=m +no
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[]\TU/lmr/m/n/12 Maps which can be downloaded are shown at []$[][][][] [] [] []
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[2]
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] 

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[][]\TU/lmtt/b/n/12 plot[][]\TU/lmtt/m/n/12 (nldElev,[][]add[][]=[][]TRUE[][],[
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[3] [4] [5] [6] [7] [8] (./mapmisc.aux) )
(see the transcript file for additional information)
Output written on mapmisc.pdf (8 pages).
Transcript written on mapmisc.log.
R --slave -e "tools::compactPDF('mapmisc.pdf', gs_quality='ebook')" 
  compacted ‘mapmisc.pdf’ from 440Kb to 113Kb
rm -rf *.md *.tex *.toc *.bbl *.blg *.aux *.out *.log *.spl *tikzDictionary *.md figure/ cache/ *.dvi *.4* *.css *.idv *.lg *.tmp *.xref *.gz my*.bib *.nav *.xml *.vrb *.snm 
SUMMARY: processing the following file failed:
  ‘north.Rmd’

Error: Vignette re-building failed.
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