Error(s) in re-building vignettes:
--- re-building 'msde-exmodels.Rmd' using rmarkdown
--- finished re-building 'msde-exmodels.Rmd'

--- re-building 'msde-quicktut.Rmd' using rmarkdown
In file included from msde-337d4649d1d55_Exports.cpp:12:0:
D:/temp/Rtmpcz56hk/sdePrior.h: In member function 'Numeric sdeRobj<sMod, sPi>::Prior(Numeric, Numeric, bool, bool, int, List) [with sMod = sdeModel; sPi = sdePrior; Numeric = Rcpp::Vector<14, Rcpp::PreserveStorage>; List = Rcpp::Vector<19>]':
D:/temp/Rtmpcz56hk/sdePrior.h:63:15: warning: 'prior.sdePrior::tmpZ' may be used uninitialized in this function [-Wmaybe-uninitialized]
     delete [] tmpZ;
               ^
In file included from D:/temp/RtmpEN8rwn/RLIBS_6938294a7a1f/msde/include/sdeInterface.h:166:0,
                 from msde-337d4649d1d55_Exports.cpp:10:
D:/temp/RtmpEN8rwn/RLIBS_6938294a7a1f/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::tmpZ' was declared here
   sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
       ^
In file included from D:/temp/RtmpEN8rwn/RLIBS_6938294a7a1f/msde/include/sdeUtils.h:7:0,
                 from D:/temp/RtmpEN8rwn/RLIBS_6938294a7a1f/msde/include/sdeRUtils.h:12,
                 from D:/temp/RtmpEN8rwn/RLIBS_6938294a7a1f/msde/include/sdeInterface.h:166,
                 from msde-337d4649d1d55_Exports.cpp:10:
D:/temp/RtmpEN8rwn/RLIBS_6938294a7a1f/msde/include/mvnUtils.h:79:16: warning: 'prior.sdePrior::tmpX' may be used uninitialized in this function [-Wmaybe-uninitialized]
     resi = x[ii] - mean[ii];
                ^
In file included from D:/temp/RtmpEN8rwn/RLIBS_6938294a7a1f/msde/include/sdeInterface.h:166:0,
                 from msde-337d4649d1d55_Exports.cpp:10:
D:/temp/RtmpEN8rwn/RLIBS_6938294a7a1f/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::tmpX' was declared here
   sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
       ^
In file included from msde-337d4649d1d55_Exports.cpp:12:0:
D:/temp/Rtmpcz56hk/sdePrior.h:61:15: warning: 'prior.sdePrior::cholSd' may be used uninitialized in this function [-Wmaybe-uninitialized]
     delete [] cholSd;
               ^
In file included from D:/temp/RtmpEN8rwn/RLIBS_6938294a7a1f/msde/include/sdeInterface.h:166:0,
                 from msde-337d4649d1d55_Exports.cpp:10:
D:/temp/RtmpEN8rwn/RLIBS_6938294a7a1f/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::cholSd' was declared here
   sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
       ^
In file included from D:/temp/RtmpEN8rwn/RLIBS_6938294a7a1f/msde/include/sdeUtils.h:7:0,
                 from D:/temp/RtmpEN8rwn/RLIBS_6938294a7a1f/msde/include/sdeRUtils.h:12,
                 from D:/temp/RtmpEN8rwn/RLIBS_6938294a7a1f/msde/include/sdeInterface.h:166,
                 from msde-337d4649d1d55_Exports.cpp:10:
D:/temp/RtmpEN8rwn/RLIBS_6938294a7a1f/msde/include/mvnUtils.h:79:27: warning: 'prior.sdePrior::mean' may be used uninitialized in this function [-Wmaybe-uninitialized]
     resi = x[ii] - mean[ii];
                           ^
In file included from D:/temp/RtmpEN8rwn/RLIBS_6938294a7a1f/msde/include/sdeInterface.h:166:0,
                 from msde-337d4649d1d55_Exports.cpp:10:
D:/temp/RtmpEN8rwn/RLIBS_6938294a7a1f/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::mean' was declared here
   sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
       ^
In file included from msde-337d4649d1d55_Exports.cpp:12:0:
D:/temp/Rtmpcz56hk/sdePrior.h:68:17: warning: 'prior.sdePrior::dataId' may be used uninitialized in this function [-Wmaybe-uninitialized]
       delete [] dataId;
                 ^
In file included from D:/temp/RtmpEN8rwn/RLIBS_6938294a7a1f/msde/include/sdeInterface.h:166:0,
                 from msde-337d4649d1d55_Exports.cpp:10:
D:/temp/RtmpEN8rwn/RLIBS_6938294a7a1f/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::dataId' was declared here
   sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
       ^
In file included from msde-337d4649d1d55_Exports.cpp:12:0:
D:/temp/Rtmpcz56hk/sdePrior.h:65:17: warning: 'prior.sdePrior::paramId' may be used uninitialized in this function [-Wmaybe-uninitialized]
       delete [] paramId;
                 ^
In file included from D:/temp/RtmpEN8rwn/RLIBS_6938294a7a1f/msde/include/sdeInterface.h:166:0,
                 from msde-337d4649d1d55_Exports.cpp:10:
D:/temp/RtmpEN8rwn/RLIBS_6938294a7a1f/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::paramId' was declared here
   sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
       ^
In file included from msde-337d4649d1d55_Exports.cpp:12:0:
D:/temp/Rtmpcz56hk/sdePrior.h:67:5: warning: 'prior.sdePrior::nDataRV' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(nDataRV > 0) {
     ^
In file included from D:/temp/RtmpEN8rwn/RLIBS_6938294a7a1f/msde/include/sdeInterface.h:166:0,
                 from msde-337d4649d1d55_Exports.cpp:10:
D:/temp/RtmpEN8rwn/RLIBS_6938294a7a1f/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::nDataRV' was declared here
   sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
       ^
In file included from msde-337d4649d1d55_Exports.cpp:12:0:
D:/temp/Rtmpcz56hk/sdePrior.h:64:5: warning: 'prior.sdePrior::nParamRV' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(nParamRV > 0) {
     ^
In file included from D:/temp/RtmpEN8rwn/RLIBS_6938294a7a1f/msde/include/sdeInterface.h:166:0,
                 from msde-337d4649d1d55_Exports.cpp:10:
D:/temp/RtmpEN8rwn/RLIBS_6938294a7a1f/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::nParamRV' was declared here
   sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
       ^
msde-337d4649d1d55_Exports.o:msde-337d4649d1d55_Exports.cpp:(.text+0x164): undefined reference to `omp_get_num_threads'
msde-337d4649d1d55_Exports.o:msde-337d4649d1d55_Exports.cpp:(.text+0x16b): undefined reference to `omp_get_thread_num'
msde-337d4649d1d55_Exports.o:msde-337d4649d1d55_Exports.cpp:(.text+0xe77): undefined reference to `omp_get_num_threads'
msde-337d4649d1d55_Exports.o:msde-337d4649d1d55_Exports.cpp:(.text+0xe7e): undefined reference to `omp_get_thread_num'
msde-337d4649d1d55_Exports.o:msde-337d4649d1d55_Exports.cpp:(.text$_ZN7sdeRobjI8sdeModel8sdePriorE6LogLikEN4Rcpp6VectorILi14ENS3_15PreserveStorageEEES6_S6_iibbi[_ZN7sdeRobjI8sdeModel8sdePriorE6LogLikEN4Rcpp6VectorILi14ENS3_15PreserveStorageEEES6_S6_iibbi]+0x365): undefined reference to `GOMP_parallel'
msde-337d4649d1d55_Exports.o:msde-337d4649d1d55_Exports.cpp:(.text$_ZN7sdeRobjI8sdeModel8sdePriorE4PostEN4Rcpp6VectorILi14ENS3_15PreserveStorageEEES6_S6_NS4_ILi13ES5_EENS4_ILi10ES5_EEiiiiS7_S7_S7_ddNS4_ILi19ES5_EES9_iiiiib[_ZN7sdeRobjI8sdeModel8sdePriorE4PostEN4Rcpp6VectorILi14ENS3_15PreserveStorageEEES6_S6_NS4_ILi13ES5_EENS4_ILi10ES5_EEiiiiS7_S7_S7_ddNS4_ILi19ES5_EES9_iiiiib]+0x1378): undefined reference to `GOMP_parallel'
msde-337d4649d1d55_Exports.o:msde-337d4649d1d55_Exports.cpp:(.text$_ZN7sdeRobjI8sdeModel8sdePriorE4PostEN4Rcpp6VectorILi14ENS3_15PreserveStorageEEES6_S6_NS4_ILi13ES5_EENS4_ILi10ES5_EEiiiiS7_S7_S7_ddNS4_ILi19ES5_EES9_iiiiib[_ZN7sdeRobjI8sdeModel8sdePriorE4PostEN4Rcpp6VectorILi14ENS3_15PreserveStorageEEES6_S6_NS4_ILi13ES5_EENS4_ILi10ES5_EEiiiiS7_S7_S7_ddNS4_ILi19ES5_EES9_iiiiib]+0x1611): undefined reference to `GOMP_parallel'
msde-337d4649d1d55_Exports.o:msde-337d4649d1d55_Exports.cpp:(.text$_ZN7sdeRobjI8sdeModel8sdePriorE4PostEN4Rcpp6VectorILi14ENS3_15PreserveStorageEEES6_S6_NS4_ILi13ES5_EENS4_ILi10ES5_EEiiiiS7_S7_S7_ddNS4_ILi19ES5_EES9_iiiiib[_ZN7sdeRobjI8sdeModel8sdePriorE4PostEN4Rcpp6VectorILi14ENS3_15PreserveStorageEEES6_S6_NS4_ILi13ES5_EENS4_ILi10ES5_EEiiiiS7_S7_S7_ddNS4_ILi19ES5_EES9_iiiiib]+0x174a): undefined reference to `GOMP_parallel'
msde-337d4649d1d55_Exports.o:msde-337d4649d1d55_Exports.cpp:(.text$_ZN7sdeRobjI8sdeModel8sdePriorE4PostEN4Rcpp6VectorILi14ENS3_15PreserveStorageEEES6_S6_NS4_ILi13ES5_EENS4_ILi10ES5_EEiiiiS7_S7_S7_ddNS4_ILi19ES5_EES9_iiiiib[_ZN7sdeRobjI8sdeModel8sdePriorE4PostEN4Rcpp6VectorILi14ENS3_15PreserveStorageEEES6_S6_NS4_ILi13ES5_EENS4_ILi10ES5_EEiiiiS7_S7_S7_ddNS4_ILi19ES5_EES9_iiiiib]+0x1a72): undefined reference to `GOMP_parallel'
msde-337d4649d1d55_Exports.o:msde-337d4649d1d55_Exports.cpp:(.text$_ZN7sdeRobjI8sdeModel8sdePriorE4PostEN4Rcpp6VectorILi14ENS3_15PreserveStorageEEES6_S6_NS4_ILi13ES5_EENS4_ILi10ES5_EEiiiiS7_S7_S7_ddNS4_ILi19ES5_EES9_iiiiib[_ZN7sdeRobjI8sdeModel8sdePriorE4PostEN4Rcpp6VectorILi14ENS3_15PreserveStorageEEES6_S6_NS4_ILi13ES5_EENS4_ILi10ES5_EEiiiiS7_S7_S7_ddNS4_ILi19ES5_EES9_iiiiib]+0x2ecf): undefined reference to `omp_get_thread_num'
collect2.exe: error: ld returned 1 exit status
Quitting from lines 223-231 (msde-quicktut.Rmd) 
Error: processing vignette 'msde-quicktut.Rmd' failed with diagnostics:
Error occurred building shared library.
--- failed re-building 'msde-quicktut.Rmd'

SUMMARY: processing the following file failed:
  'msde-quicktut.Rmd'

Error: Vignette re-building failed.
Execution halted