Error(s) in re-building vignettes:
  ...
--- re-building 'cap-recap.Rnw' using Sweave
Loading required package: lattice
Loading required package: parallel
Loading required package: Rcpp
Loading required package: reshape2
--- finished re-building 'cap-recap.Rnw'

--- re-building 'colext.Rnw' using Sweave
Loading required package: lattice
Loading required package: parallel
Loading required package: Rcpp
Loading required package: reshape2
--- finished re-building 'colext.Rnw'

--- re-building 'distsamp.Rnw' using Sweave
Loading required package: lattice
Loading required package: parallel
Loading required package: Rcpp
Loading required package: reshape2
Warning in formatDistData(dists, distCol = "distance", transectNameCol = "transect",  :
  The transects were converted to a factor

Error: processing vignette 'distsamp.Rnw' failed with diagnostics:
 chunk 4 
Error in unmarkedFrameDS(y = as.matrix(yDat), siteCovs = covs, survey = "line",  : 
  tlength should be a vector with length(tlength)==nrow(y)

--- failed re-building 'distsamp.Rnw'

--- re-building 'spp-dist.Rnw' using Sweave
Loading required package: lattice
Loading required package: parallel
Loading required package: Rcpp
Loading required package: reshape2
Loading required package: sp

Attaching package: 'sp'

The following object is masked from 'package:unmarked':

    coordinates


Attaching package: 'raster'

The following objects are masked from 'package:unmarked':

    getData, projection

Warning: 22 sites have been discarded because of missing data.
--- finished re-building 'spp-dist.Rnw'

--- re-building 'unmarked.Rnw' using Sweave
Loading required package: lattice
Loading required package: parallel
Loading required package: Rcpp
Loading required package: reshape2
Warning in truncateToBinary(y) :
  Some observations were > 1.  These were truncated to 1.
Warning in truncateToBinary(y) :
  Some observations were > 1.  These were truncated to 1.
Warning in truncateToBinary(object@data@y) :
  Some observations were > 1.  These were truncated to 1.
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
Warning in rbinom(M * J, 1, prob = p) : NAs produced
--- finished re-building 'unmarked.Rnw'

SUMMARY: processing the following file failed:
  'distsamp.Rnw'

Error: Vignette re-building failed.
Execution halted