ASC: no visible global function definition for ‘cor’
DCe: no visible global function definition for ‘pbinom’
DCe: no visible global function definition for ‘p.adjust’
DCp: no visible global function definition for ‘p.adjust’
DRrank: no visible global function definition for ‘p.adjust’
LFC: no visible global function definition for ‘jpeg’
LFC: no visible global function definition for ‘plot’
LFC: no visible global function definition for ‘glm’
LFC: no visible global function definition for ‘predict’
LFC: no visible global function definition for ‘points’
LFC: no visible global function definition for ‘lines’
LFC: no visible global function definition for ‘dev.off’
LRC: no visible global function definition for ‘cor’
RIF: no visible global function definition for ‘cor’
TEDscore: no visible global function definition for ‘pbinom’
WGCNA: no visible global function definition for ‘cor’
percentLinkfilter: no visible global function definition for ‘cor’
qLinkfilter: no visible global function definition for ‘cor’
qLinkfilter: no visible global function definition for ‘pt’
qLinkfilter: no visible global function definition for ‘p.adjust’
rLinkfilter: no visible global function definition for ‘cor’
varianceBasedfilter: no visible binding for global variable ‘var’
varianceBasedfilter: no visible global function definition for ‘median’
varianceBasedfilter: no visible global function definition for ‘pchisq’
visTF2target_DCL: no visible global function definition for ‘pdf’
visTF2target_DCL: no visible global function definition for ‘plot’
visTF2target_DCL: no visible global function definition for ‘dev.off’
visTF_bridged_DCL: no visible global function definition for ‘pdf’
visTF_bridged_DCL: no visible global function definition for ‘plot’
visTF_bridged_DCL: no visible global function definition for ‘dev.off’
Undefined global functions or variables:
  cor dev.off glm jpeg lines median p.adjust pbinom pchisq pdf plot
  points predict pt var
Consider adding
  importFrom("grDevices", "dev.off", "jpeg", "pdf")
  importFrom("graphics", "lines", "plot", "points")
  importFrom("stats", "cor", "glm", "median", "p.adjust", "pbinom",
             "pchisq", "predict", "pt", "var")
to your NAMESPACE file.