LaTeX errors when creating PDF version.
This typically indicates Rd problems.
LaTeX errors found:
! Undefined control sequence.
\Ginclude@graphics ...\Ginput@path \set@curr@file 
                                                  {#1}\edef \uq@curr@file {\...
l.1093 \Figure{power.pdf}{width=7cm}
                                    
! Undefined control sequence.
\Ginclude@graphics ...e \expandafter {\@curr@file 
                                                  }}\expandafter \filename@p...
l.1093 \Figure{power.pdf}{width=7cm}
                                    
! Undefined control sequence.
<recently read> \unquote@name 
                              
l.1093 \Figure{power.pdf}{width=7cm}
                                    
! Undefined control sequence.
<recently read> \quote@name 
                            
l.1093 \Figure{power.pdf}{width=7cm}
                                    
! Undefined control sequence.
<recently read> \quote@name 
                            
l.1093 \Figure{power.pdf}{width=7cm}
                                    
! LaTeX Error: File `power.pdf' not found.

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 ...                                              
! Undefined control sequence.
\Ginclude@graphics ...\Ginput@path \set@curr@file 
                                                  {#1}\edef \uq@curr@file {\...
l.2553 \Figure{ACEunivariate.pdf}{width=7cm}
                                            
! Undefined control sequence.
\Ginclude@graphics ...e \expandafter {\@curr@file 
                                                  }}\expandafter \filename@p...
l.2553 \Figure{ACEunivariate.pdf}{width=7cm}
                                            
! Undefined control sequence.
<recently read> \unquote@name 
                              
l.2553 \Figure{ACEunivariate.pdf}{width=7cm}
                                            
! Undefined control sequence.
<recently read> \quote@name 
                            
l.2553 \Figure{ACEunivariate.pdf}{width=7cm}
                                            
! Undefined control sequence.
<recently read> \quote@name 
                            
l.2553 \Figure{ACEunivariate.pdf}{width=7cm}
                                            
! LaTeX Error: File `ACEunivariate.pdf' not found.

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Type  H <return>  for immediate help.
 ...                                              
! Undefined control sequence.
\Ginclude@graphics ...\Ginput@path \set@curr@file 
                                                  {#1}\edef \uq@curr@file {\...
l.2562 \Figure{ACEmatrix.pdf}{width=7cm}
                                        
! Undefined control sequence.
\Ginclude@graphics ...e \expandafter {\@curr@file 
                                                  }}\expandafter \filename@p...
l.2562 \Figure{ACEmatrix.pdf}{width=7cm}
                                        
! Undefined control sequence.
<recently read> \unquote@name 
                              
l.2562 \Figure{ACEmatrix.pdf}{width=7cm}
                                        
! Undefined control sequence.
<recently read> \quote@name 
                            
l.2562 \Figure{ACEmatrix.pdf}{width=7cm}
                                        
! Undefined control sequence.
<recently read> \quote@name 
                            
l.2562 \Figure{ACEmatrix.pdf}{width=7cm}
                                        
! LaTeX Error: File `ACEmatrix.pdf' not found.

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Type  H <return>  for immediate help.
 ...                                              
! Undefined control sequence.
\Ginclude@graphics ...\Ginput@path \set@curr@file 
                                                  {#1}\edef \uq@curr@file {\...
l.2990 \Figure{ACEcovVarianceModel.pdf}{width=7cm}
                                                  
! Undefined control sequence.
\Ginclude@graphics ...e \expandafter {\@curr@file 
                                                  }}\expandafter \filename@p...
l.2990 \Figure{ACEcovVarianceModel.pdf}{width=7cm}
                                                  
! Undefined control sequence.
<recently read> \unquote@name 
                              
l.2990 \Figure{ACEcovVarianceModel.pdf}{width=7cm}
                                                  
! Undefined control sequence.
<recently read> \quote@name 
                            
l.2990 \Figure{ACEcovVarianceModel.pdf}{width=7cm}
                                                  
! Undefined control sequence.
<recently read> \quote@name 
                            
l.2990 \Figure{ACEcovVarianceModel.pdf}{width=7cm}
                                                  
! LaTeX Error: File `ACEcovVarianceModel.pdf' not found.

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Type  H <return>  for immediate help.
 ...                                              
! Undefined control sequence.
\Ginclude@graphics ...\Ginput@path \set@curr@file 
                                                  {#1}\edef \uq@curr@file {\...
l.3160 \Figure{ACEv.pdf}{width=7cm}
                                   
! Undefined control sequence.
\Ginclude@graphics ...e \expandafter {\@curr@file 
                                                  }}\expandafter \filename@p...
l.3160 \Figure{ACEv.pdf}{width=7cm}
                                   
! Undefined control sequence.
<recently read> \unquote@name 
                              
l.3160 \Figure{ACEv.pdf}{width=7cm}
                                   
! Undefined control sequence.
<recently read> \quote@name 
                            
l.3160 \Figure{ACEv.pdf}{width=7cm}
                                   
! Undefined control sequence.
<recently read> \quote@name 
                            
l.3160 \Figure{ACEv.pdf}{width=7cm}
                                   
! LaTeX Error: File `ACEv.pdf' not found.

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Type  H <return>  for immediate help.
 ...                                              
! Undefined control sequence.
\Ginclude@graphics ...\Ginput@path \set@curr@file 
                                                  {#1}\edef \uq@curr@file {\...
l.3451 \Figure{ACEcovOnMeans.pdf}{width=7cm}
                                            
! Undefined control sequence.
\Ginclude@graphics ...e \expandafter {\@curr@file 
                                                  }}\expandafter \filename@p...
l.3451 \Figure{ACEcovOnMeans.pdf}{width=7cm}
                                            
! Undefined control sequence.
<recently read> \unquote@name 
                              
l.3451 \Figure{ACEcovOnMeans.pdf}{width=7cm}
                                            
! Undefined control sequence.
<recently read> \quote@name 
                            
l.3451 \Figure{ACEcovOnMeans.pdf}{width=7cm}
                                            
! Undefined control sequence.
<recently read> \quote@name 
                            
l.3451 \Figure{ACEcovOnMeans.pdf}{width=7cm}
                                            
! LaTeX Error: File `ACEcovOnMeans.pdf' not found.

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Type  H <return>  for immediate help.
 ...                                              
! Undefined control sequence.
\Ginclude@graphics ...\Ginput@path \set@curr@file 
                                                  {#1}\edef \uq@curr@file {\...
l.4493 \Figure{CP.pdf}{width=7cm}
                                 
! Undefined control sequence.
\Ginclude@graphics ...e \expandafter {\@curr@file 
                                                  }}\expandafter \filename@p...
l.4493 \Figure{CP.pdf}{width=7cm}
                                 
! Undefined control sequence.
<recently read> \unquote@name 
                              
l.4493 \Figure{CP.pdf}{width=7cm}
                                 
! Undefined control sequence.
<recently read> \quote@name 
                            
l.4493 \Figure{CP.pdf}{width=7cm}
                                 
! Undefined control sequence.
<recently read> \quote@name 
                            
l.4493 \Figure{CP.pdf}{width=7cm}
                                 
! LaTeX Error: File `CP.pdf' not found.

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 ...                                              
! Undefined control sequence.
\Ginclude@graphics ...\Ginput@path \set@curr@file 
                                                  {#1}\edef \uq@curr@file {\...
l.4874 \Figure{umxEFA.pdf}{width=7cm}
                                     
! Undefined control sequence.
\Ginclude@graphics ...e \expandafter {\@curr@file 
                                                  }}\expandafter \filename@p...
l.4874 \Figure{umxEFA.pdf}{width=7cm}
                                     
! Undefined control sequence.
<recently read> \unquote@name 
                              
l.4874 \Figure{umxEFA.pdf}{width=7cm}
                                     
! Undefined control sequence.
<recently read> \quote@name 
                            
l.4874 \Figure{umxEFA.pdf}{width=7cm}
                                     
! Undefined control sequence.
<recently read> \quote@name 
                            
l.4874 \Figure{umxEFA.pdf}{width=7cm}
                                     
! LaTeX Error: File `umxEFA.pdf' not found.

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Type  H <return>  for immediate help.
 ...                                              
! Undefined control sequence.
\Ginclude@graphics ...\Ginput@path \set@curr@file 
                                                  {#1}\edef \uq@curr@file {\...
l.6000 \Figure{GxE.pdf}{width=7cm}
                                  
! Undefined control sequence.
\Ginclude@graphics ...e \expandafter {\@curr@file 
                                                  }}\expandafter \filename@p...
l.6000 \Figure{GxE.pdf}{width=7cm}
                                  
! Undefined control sequence.
<recently read> \unquote@name 
                              
l.6000 \Figure{GxE.pdf}{width=7cm}
                                  
! Undefined control sequence.
<recently read> \quote@name 
                            
l.6000 \Figure{GxE.pdf}{width=7cm}
                                  
! Undefined control sequence.
<recently read> \quote@name 
                            
l.6000 \Figure{GxE.pdf}{width=7cm}
                                  
! LaTeX Error: File `GxE.pdf' not found.

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Type  H <return>  for immediate help.
 ...                                              
! Undefined control sequence.
\Ginclude@graphics ...\Ginput@path \set@curr@file 
                                                  {#1}\edef \uq@curr@file {\...
l.6132 \Figure{GxEbiv.png}{}
                            
! Undefined control sequence.
\Ginclude@graphics ...e \expandafter {\@curr@file 
                                                  }}\expandafter \filename@p...
l.6132 \Figure{GxEbiv.png}{}
                            
! Undefined control sequence.
<recently read> \unquote@name 
                              
l.6132 \Figure{GxEbiv.png}{}
                            
! Undefined control sequence.
<recently read> \quote@name 
                            
l.6132 \Figure{GxEbiv.png}{}
                            
! Undefined control sequence.
<recently read> \quote@name 
                            
l.6132 \Figure{GxEbiv.png}{}
                            
! LaTeX Error: File `GxEbiv.png' not found.

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Type  H <return>  for immediate help.
 ...                                              
! Undefined control sequence.
\Ginclude@graphics ...\Ginput@path \set@curr@file 
                                                  {#1}\edef \uq@curr@file {\...
l.6425 \Figure{IP.pdf}{width=7cm}
                                 
! Undefined control sequence.
\Ginclude@graphics ...e \expandafter {\@curr@file 
                                                  }}\expandafter \filename@p...
l.6425 \Figure{IP.pdf}{width=7cm}
                                 
! Undefined control sequence.
<recently read> \unquote@name 
                              
l.6425 \Figure{IP.pdf}{width=7cm}
                                 
! Undefined control sequence.
<recently read> \quote@name 
                            
l.6425 \Figure{IP.pdf}{width=7cm}
                                 
! Undefined control sequence.
<recently read> \quote@name 
                            
l.6425 \Figure{IP.pdf}{width=7cm}
                                 
! LaTeX Error: File `IP.pdf' not found.

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Type  H <return>  for immediate help.
 ...                                              
! Undefined control sequence.
\Ginclude@graphics ...\Ginput@path \set@curr@file 
                                                  {#1}\edef \uq@curr@file {\...
l.7195 \Figure{TSLS.pdf}{width=7cm}
                                   
! Undefined control sequence.
\Ginclude@graphics ...e \expandafter {\@curr@file 
                                                  }}\expandafter \filename@p...
l.7195 \Figure{TSLS.pdf}{width=7cm}
                                   
! Undefined control sequence.
<recently read> \unquote@name 
                              
l.7195 \Figure{TSLS.pdf}{width=7cm}
                                   
! Undefined control sequence.
<recently read> \quote@name 
                            
l.7195 \Figure{TSLS.pdf}{width=7cm}
                                   
! Undefined control sequence.
<recently read> \quote@name 
                            
l.7195 \Figure{TSLS.pdf}{width=7cm}
                                   
! LaTeX Error: File `TSLS.pdf' not found.

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Type  H <return>  for immediate help.
 ...                                              
! Undefined control sequence.
\Ginclude@graphics ...\Ginput@path \set@curr@file 
                                                  {#1}\edef \uq@curr@file {\...
l.8815 \Figure{power.pdf}{width=7cm}
                                    
! Undefined control sequence.
\Ginclude@graphics ...e \expandafter {\@curr@file 
                                                  }}\expandafter \filename@p...
l.8815 \Figure{power.pdf}{width=7cm}
                                    
! Undefined control sequence.
<recently read> \unquote@name 
                              
l.8815 \Figure{power.pdf}{width=7cm}
                                    
! Undefined control sequence.
<recently read> \quote@name 
                            
l.8815 \Figure{power.pdf}{width=7cm}
                                    
! Undefined control sequence.
<recently read> \quote@name 
                            
l.8815 \Figure{power.pdf}{width=7cm}
                                    
! LaTeX Error: File `power.pdf' not found.

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Type  H <return>  for immediate help.
 ...                                              
! Undefined control sequence.
\Ginclude@graphics ...\Ginput@path \set@curr@file 
                                                  {#1}\edef \uq@curr@file {\...
l.9002 \Figure{sketch.pdf}{width=7cm}
                                     
! Undefined control sequence.
\Ginclude@graphics ...e \expandafter {\@curr@file 
                                                  }}\expandafter \filename@p...
l.9002 \Figure{sketch.pdf}{width=7cm}
                                     
! Undefined control sequence.
<recently read> \unquote@name 
                              
l.9002 \Figure{sketch.pdf}{width=7cm}
                                     
! Undefined control sequence.
<recently read> \quote@name 
                            
l.9002 \Figure{sketch.pdf}{width=7cm}
                                     
! Undefined control sequence.
<recently read> \quote@name 
                            
l.9002 \Figure{sketch.pdf}{width=7cm}
                                     
! LaTeX Error: File `sketch.pdf' not found.

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Type  H <return>  for immediate help.
 ...                                              
! Undefined control sequence.
\Ginclude@graphics ...\Ginput@path \set@curr@file 
                                                  {#1}\edef \uq@curr@file {\...
l.10253 \Figure{simplex.pdf}{width=7cm}
                                       
! Undefined control sequence.
\Ginclude@graphics ...e \expandafter {\@curr@file 
                                                  }}\expandafter \filename@p...
l.10253 \Figure{simplex.pdf}{width=7cm}
                                       
! Undefined control sequence.
<recently read> \unquote@name 
                              
l.10253 \Figure{simplex.pdf}{width=7cm}
                                       
! Undefined control sequence.
<recently read> \quote@name 
                            
l.10253 \Figure{simplex.pdf}{width=7cm}
                                       
! Undefined control sequence.
<recently read> \quote@name 
                            
l.10253 \Figure{simplex.pdf}{width=7cm}
                                       
! LaTeX Error: File `simplex.pdf' not found.

See the LaTeX manual or LaTeX Companion for explanation.
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 ...