Running ‘testthat.R’ [137s/195s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(ActiveDriverWGS)
  > 
  > test_check("ActiveDriverWGS")
  0 remove hypermut, n= 0 ,  0 %
  hypermuted samples:   
  
  reversing 0 positions
  Removing  0  invalid SNVs & indels
  
  .0 remove hypermut, n= 0 ,  0 %
  hypermuted samples:   
  
  reversing 0 positions
  Removing  0  invalid SNVs & indels
  
  0 remove hypermut, n= 0 ,  0 %
  hypermuted samples:   
  
  reversing 0 positions
  Removing  0  invalid SNVs & indels
  
  Tests to do:  11 
  ...........reversing 0 positions
  Removing  0  invalid SNVs & indels
  
  reversing 0 positions
  Removing  0  invalid SNVs
  
  28 remove hypermut, n= 58256 ,  100 %
  hypermuted samples:  001-0002-03TD 003-0005-09TD 012-02-1TD 125 128 137 141 151 178 192 26 277 282 294 306 308 318 342 343 367 393 467 473 477 519 523 564 CLL4-ARTICLE 
  
  0 remove hypermut, n= 0 ,  0 %
  hypermuted samples:   
  
  0 remove hypermut, n= 0 ,  0 %
  hypermuted samples:   
  
  reversing 0 positions
  0 remove hypermut, n= 0 ,  0 %
  hypermuted samples:   
  
  reversing 0 positions
  Removing  0  invalid SNVs & indels
  
  0 remove hypermut, n= 0 ,  0 %
  hypermuted samples:   
  
  reversing 0 positions
  Removing  0  invalid SNVs & indels
  
  0 remove hypermut, n= 0 ,  0 %
  hypermuted samples:   
  
  reversing 0 positions
  Removing  0  invalid SNVs & indels
  
  0 remove hypermut, n= 0 ,  0 %
  hypermuted samples:   
  
  reversing 0 positions
  Removing  0  invalid SNVs & indels
  
  0 remove hypermut, n= 0 ,  0 %
  hypermuted samples:   
  
  reversing 0 positions
  Removing  0  invalid SNVs & indels
  
  0 remove hypermut, n= 0 ,  0 %
  hypermuted samples:   
  
  reversing 0 positions
  Removing  0  invalid SNVs & indels
  
  0 remove hypermut, n= 0 ,  0 %
  hypermuted samples:   
  
  reversing 0 positions
  Removing  0  invalid SNVs & indels
  
  0 remove hypermut, n= 0 ,  0 %
  hypermuted samples:   
  
  reversing 0 positions
  Terminated