Running ‘testthat.R’ [17s/20s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(mssm)
  > 
  > test_check("mssm", reporter = "summary")
  C++: .
  Test versus old results for kernel methods: .......
  Test versus old results for 'mssm' methods: .............................S......................S......................S......................S......................S......................S......................S...1.2.....3....4..5.6S......................S..
  Testing manual page results: SS...S..S
  Testing miscellaneous functions: .
  Testing sample methods: ....
  
  ══ Skipped ═════════════════════════════════════════════════════════════════════
  1. get the same with 'poisson_log' (@test-gets-old-mssm.R#213) - On CRAN
  
  2. get the same with 'poisson_sqrt' (@test-gets-old-mssm.R#225) - On CRAN
  
  3. get the same with 'binomial_logit' (@test-gets-old-mssm.R#236) - On CRAN
  
  4. get the same with 'binomial_cloglog' (@test-gets-old-mssm.R#248) - On CRAN
  
  5. get the same with 'binomial_probit' (@test-gets-old-mssm.R#261) - On CRAN
  
  6. get the same with 'Gamma_log' (@test-gets-old-mssm.R#273) - On CRAN
  
  7. get the same with 'gaussian_identity' (@test-gets-old-mssm.R#283) - On CRAN
  
  8. get the same with 'gaussian_log' (@test-gets-old-mssm.R#294) - On CRAN
  
  9. get the same with 'gaussian_inverse' (@test-gets-old-mssm.R#306) - On CRAN
  
  10. manual page for 'mssm' yields the same output (@test-man-pages.R#6) - On CRAN
  
  11. manual page for 'mssm' yields the same output (@test-man-pages.R#6) - On CRAN
  
  12. manual page for 'plot.mssm' yields the same output (@test-man-pages.R#62) - On CRAN
  
  13. manual page for 'get_ess.mssm' and `plot.mssmEss` yields the same output (@test-man-pages.R#99) - On CRAN
  
  ══ Failed ══════════════════════════════════════════════════════════════════════
  ── 1. Failure: get the same with 'gaussian_log' (@test-gets-old-mssm.R#291)  ───
  gaussian-log has changed from known value recorded in 'mssm-gaussian-log.RDS'.
  Component "pf_output": Component 1: Component 1: Mean relative difference: 2.946e-06
  Component "pf_output": Component 1: Component 3: Mean relative difference: 2.107e-06
  Component "pf_output": Component 1: Component 4: Mean relative difference: 9.859e-06
  Component "pf_output": Component 2: Component 1: Mean relative difference: 1.35e-06
  Component "pf_output": Component 2: Component 3: Mean relative difference: 7.405e-08
  Component "pf_output": Component 2: Component 4: Mean relative difference: 1.96e-07
  Component "pf_output": Component 3: Component 1: Mean relative difference: 9.774e-07
  Component "pf_output": Component 3: Component 3: Mean relative difference: 2.415e-08
  Component "pf_output": Component 3: Component 4: Mean relative difference: 3.261e-08
  ...
  
  ── 2. Failure: get the same with 'gaussian_log' (@test-gets-old-mssm.R#291)  ───
  gaussian-log has changed from known value recorded in 'mssm-smooth-gaussian-log.RDS'.
  100/100 mismatches (average diff: 4.75e-06)
  [1] -4.65 - -4.65 == -4.58e-06
  [2] -4.98 - -4.98 == -5.86e-06
  [3] -4.58 - -4.58 == -2.03e-06
  [4] -4.58 - -4.58 == -3.50e-06
  [5] -4.68 - -4.68 == -9.76e-06
  [6] -4.70 - -4.70 == -7.53e-06
  [7] -4.45 - -4.45 ==  2.62e-06
  [8] -4.62 - -4.62 == -5.63e-06
  [9] -4.62 - -4.62 == -6.73e-06
  ...
  
  ── 3. Failure: get the same with 'gaussian_log' (@test-gets-old-mssm.R#291)  ───
  gaussian-log has changed from known value recorded in 'mssm-gradient-gaussian-log.RDS'.
  Component 20: Mean relative difference: 1.152e-05
  
  ── 4. Failure: get the same with 'gaussian_log' (@test-gets-old-mssm.R#291)  ───
  gaussian-log has changed from known value recorded in 'mssm-gaussian-log-kd.RDS'.
  Component "pf_output": Component 1: Component 1: Mean relative difference: 2.946e-06
  Component "pf_output": Component 1: Component 3: Mean relative difference: 2.107e-06
  Component "pf_output": Component 1: Component 4: Mean relative difference: 9.859e-06
  Component "pf_output": Component 2: Component 1: Mean relative difference: 1.35e-06
  Component "pf_output": Component 2: Component 3: Mean relative difference: 7.405e-08
  Component "pf_output": Component 2: Component 4: Mean relative difference: 1.96e-07
  Component "pf_output": Component 3: Component 1: Mean relative difference: 9.774e-07
  Component "pf_output": Component 3: Component 3: Mean relative difference: 2.415e-08
  Component "pf_output": Component 3: Component 4: Mean relative difference: 3.261e-08
  ...
  
  ── 5. Failure: get the same with 'gaussian_log' (@test-gets-old-mssm.R#291)  ───
  gaussian-log has changed from known value recorded in 'mssm-gaussian-log-kd-large-eps.RDS'.
  Component "pf_output": Component 1: Component 1: Mean relative difference: 2.946e-06
  Component "pf_output": Component 1: Component 3: Mean relative difference: 2.107e-06
  Component "pf_output": Component 1: Component 4: Mean relative difference: 9.859e-06
  Component "pf_output": Component 2: Component 1: Mean relative difference: 1.35e-06
  Component "pf_output": Component 2: Component 3: Mean relative difference: 7.589e-08
  Component "pf_output": Component 2: Component 4: Mean relative difference: 1.95e-07
  Component "pf_output": Component 3: Component 1: Mean relative difference: 1.018e-06
  Component "pf_output": Component 3: Component 3: Mean relative difference: 2.287e-08
  Component "pf_output": Component 3: Component 4: Mean relative difference: 3.242e-08
  ...
  
  ── 6. Failure: get the same with 'gaussian_log' (@test-gets-old-mssm.R#291)  ───
  gaussian-log has changed from known value recorded in 'mssm-smooth-gaussian-log-kd-.RDS'.
  100/100 mismatches (average diff: 4.77e-06)
  [1] -4.65 - -4.65 == -4.57e-06
  [2] -4.99 - -4.99 == -5.90e-06
  [3] -4.57 - -4.57 == -2.03e-06
  [4] -4.58 - -4.58 == -3.51e-06
  [5] -4.68 - -4.68 == -9.80e-06
  [6] -4.70 - -4.70 == -7.54e-06
  [7] -4.45 - -4.45 ==  2.61e-06
  [8] -4.62 - -4.62 == -5.67e-06
  [9] -4.62 - -4.62 == -6.75e-06
  ...
  
  ══ DONE ════════════════════════════════════════════════════════════════════════
  Error: Test failures
  Execution halted