Error(s) in re-building vignettes:
  ...
--- re-building ‘ndtv.Rnw’ using Sweave
Loading required package: network
network: Classes for Relational Data
Version 1.15 created on 2019-04-01.
copyright (c) 2005, Carter T. Butts, University of California-Irvine
                    Mark S. Handcock, University of California -- Los Angeles
                    David R. Hunter, Penn State University
                    Martina Morris, University of Washington
                    Skye Bender-deMoll, University of Washington
 For citation information, type citation("network").
 Type help("network-package") to get started.

Loading required package: networkDynamic

networkDynamic: version 0.10.0, created on 2019-04-04
Copyright (c) 2019, Carter T. Butts, University of California -- Irvine
                    Ayn Leslie-Cook, University of Washington
                    Pavel N. Krivitsky, University of Wollongong
                    Skye Bender-deMoll, University of Washington
                    with contributions from
                    Zack Almquist, University of California -- Irvine
                    David R. Hunter, Penn State University
                    Li Wang
                    Kirk Li, University of Washington
                    Steven M. Goodreau, University of Washington
                    Jeffrey Horner
                    Martina Morris, University of Washington
Based on "statnet" project software (statnet.org).
For license and citation information see statnet.org/attribution
or type citation("networkDynamic").

Loading required package: animation
Loading required package: sna
Loading required package: statnet.common

Attaching package: ‘statnet.common’

The following object is masked from ‘package:base’:

    order

sna: Tools for Social Network Analysis
Version 2.4 created on 2016-07-23.
copyright (c) 2005, Carter T. Butts, University of California-Irvine
 For citation information, type citation("sna").
 Type help(package="sna") to get started.


ndtv: version 0.13.0, created on 2019-05-21
Copyright (c) 2019, Skye Bender-deMoll, University of Washington
                    with contributions from
                    Martina Morris, University of Washington
Based on "statnet" project software (statnet.org).
For license and citation information see statnet.org/attribution
or type citation("ndtv").

No slice.par found, using
Calculating layout for network slice from time  1 to 2
Calculating layout for network slice from time  2 to 3
Calculating layout for network slice from time  3 to 4
Calculating layout for network slice from time  4 to 5
Calculating layout for network slice from time  5 to 6
Calculating layout for network slice from time  6 to 7
Calculating layout for network slice from time  7 to 8
Calculating layout for network slice from time  8 to 9
Calculating layout for network slice from time  9 to 10
Calculating layout for network slice from time  10 to 11
Calculating layout for network slice from time  11 to 12
Calculating layout for network slice from time  12 to 13
rendering 10 frames for slice 0
rendering 10 frames for slice 1
rendering 10 frames for slice 2
rendering 10 frames for slice 3
rendering 10 frames for slice 4
rendering 10 frames for slice 5
rendering 10 frames for slice 6
rendering 10 frames for slice 7
rendering 10 frames for slice 8
rendering 10 frames for slice 9
rendering 10 frames for slice 10
rendering 10 frames for slice 11
Loading required package: tergm
Loading required package: ergm

ergm: version 3.10.1, created on 2019-05-14
Copyright (c) 2019, Mark S. Handcock, University of California -- Los Angeles
                    David R. Hunter, Penn State University
                    Carter T. Butts, University of California -- Irvine
                    Steven M. Goodreau, University of Washington
                    Pavel N. Krivitsky, University of Wollongong
                    Martina Morris, University of Washington
                    with contributions from
                    Li Wang
                    Kirk Li, University of Washington
                    Skye Bender-deMoll, University of Washington
                    Chad Klumb
Based on "statnet" project software (statnet.org).
For license and citation information see statnet.org/attribution
or type citation("ergm").

NOTE: Versions before 3.6.1 had a bug in the
implementation of the bd() constriant which distorted
the sampled distribution somewhat. In addition,
Sampson's Monks datasets had mislabeled vertices. See
the NEWS and the documentation for more details.

NOTE: Some common term arguments pertaining to vertex
attribute and level selection have changed in 3.10.0.
See terms help for more details. Use
‘options(ergm.term=list(version="3.9.4"))’ to use old
behavior.


tergm: version 3.6.0, created on 2019-05-15
Copyright (c) 2019, Pavel N. Krivitsky, University of Wollongong
                    Mark S. Handcock, University of California -- Los Angeles
                    with contributions from
                    David R. Hunter, Penn State University
                    Steven M. Goodreau, University of Washington
                    Martina Morris, University of Washington
                    Nicole Bohme Carnegie, New York University
                    Carter T. Butts, University of California -- Irvine
                    Ayn Leslie-Cook, University of Washington
                    Skye Bender-deMoll
                    Li Wang
                    Kirk Li, University of Washington
Based on "statnet" project software (statnet.org).
For license and citation information see statnet.org/attribution
or type citation("tergm").

Starting maximum pseudolikelihood estimation (MPLE):
Evaluating the predictor and response matrix.
Maximizing the pseudolikelihood.
Finished MPLE.
Starting Monte Carlo maximum likelihood estimation (MCMLE):
Iteration 1 of at most 20:
NOTE: Messages ‘Error in mcexit(0L)’ may appear; please disregard them.
Optimizing with step length 1.
The log-likelihood improved by 0.1597.
Step length converged once. Increasing MCMC sample size.
Iteration 2 of at most 20:
NOTE: Messages ‘Error in mcexit(0L)’ may appear; please disregard them.
Optimizing with step length 1.
The log-likelihood improved by 0.001707.
Step length converged twice. Stopping.
Finished MCMLE.
This model was fit using MCMC.  To examine model
diagnostics and check for degeneracy, use the
mcmc.diagnostics() function.
Calculating layout for network slice from time  75 to 76
Calculating layout for network slice from time  76 to 77
Calculating layout for network slice from time  77 to 78
Calculating layout for network slice from time  78 to 79
Calculating layout for network slice from time  79 to 80
Calculating layout for network slice from time  80 to 81
Calculating layout for network slice from time  81 to 82
Calculating layout for network slice from time  82 to 83
Calculating layout for network slice from time  83 to 84
Calculating layout for network slice from time  84 to 85
Calculating layout for network slice from time  85 to 86
Calculating layout for network slice from time  86 to 87
Calculating layout for network slice from time  87 to 88
Calculating layout for network slice from time  88 to 89
Calculating layout for network slice from time  89 to 90
Calculating layout for network slice from time  90 to 91
Calculating layout for network slice from time  91 to 92
Calculating layout for network slice from time  92 to 93
Calculating layout for network slice from time  93 to 94
Calculating layout for network slice from time  94 to 95
Calculating layout for network slice from time  95 to 96
Calculating layout for network slice from time  96 to 97
Calculating layout for network slice from time  97 to 98
Calculating layout for network slice from time  98 to 99
Calculating layout for network slice from time  99 to 100
Calculating layout for network slice from time  100 to 101
rendering 5 frames for slice 0
rendering 5 frames for slice 1
rendering 5 frames for slice 2
rendering 5 frames for slice 3
rendering 5 frames for slice 4
rendering 5 frames for slice 5
rendering 5 frames for slice 6
rendering 5 frames for slice 7
rendering 5 frames for slice 8
rendering 5 frames for slice 9
rendering 5 frames for slice 10
rendering 5 frames for slice 11
rendering 5 frames for slice 12
rendering 5 frames for slice 13
rendering 5 frames for slice 14
rendering 5 frames for slice 15
rendering 5 frames for slice 16
rendering 5 frames for slice 17
rendering 5 frames for slice 18
rendering 5 frames for slice 19
rendering 5 frames for slice 20
rendering 5 frames for slice 21
rendering 5 frames for slice 22
rendering 5 frames for slice 23
rendering 5 frames for slice 24
rendering 5 frames for slice 25
Executing: 'ffmpeg' -y -framerate 10 -i Rplot%d.png -b 5000k stergm.sim.1.mp4
ffmpeg version 4.1.1-1 Copyright (c) 2000-2019 the FFmpeg developers
  built with gcc 8 (Debian 8.2.0-20)
  configuration: --prefix=/usr --extra-version=1 --toolchain=hardened --libdir=/usr/lib/x86_64-linux-gnu --incdir=/usr/include/x86_64-linux-gnu --arch=amd64 --enable-gpl --disable-stripping --enable-avresample --disable-filter=resample --enable-avisynth --enable-gnutls --enable-ladspa --enable-libaom --enable-libass --enable-libbluray --enable-libbs2b --enable-libcaca --enable-libcdio --enable-libcodec2 --enable-libflite --enable-libfontconfig --enable-libfreetype --enable-libfribidi --enable-libgme --enable-libgsm --enable-libjack --enable-libmp3lame --enable-libmysofa --enable-libopenjpeg --enable-libopenmpt --enable-libopus --enable-libpulse --enable-librsvg --enable-librubberband --enable-libshine --enable-libsnappy --enable-libsoxr --enable-libspeex --enable-libssh --enable-libtheora --enable-libtwolame --enable-libvidstab --enable-libvorbis --enable-libvpx --enable-libwavpack --enable-libwebp --enable-libx265 --enable-libxml2 --enable-libxvid --enable-libzmq --enable-libzvbi --enable-lv2 --enable-omx --enable-openal --enable-opengl --enable-sdl2 --enable-libdc1394 --enable-libdrm --enable-libiec61883 --enable-chromaprint --enable-frei0r --enable-libx264 --enable-shared
  libavutil      56. 22.100 / 56. 22.100
  libavcodec     58. 35.100 / 58. 35.100
  libavformat    58. 20.100 / 58. 20.100
  libavdevice    58.  5.100 / 58.  5.100
  libavfilter     7. 40.101 /  7. 40.101
  libavresample   4.  0.  0 /  4.  0.  0
  libswscale      5.  3.100 /  5.  3.100
  libswresample   3.  3.100 /  3.  3.100
  libpostproc    55.  3.100 / 55.  3.100
[image2 @ 0x5652284e9440] Could find no file with path 'Rplot%d.png' and index in the range 0-4
Rplot%d.png: No such file or directory
caching 5 properties for slice 0
caching 5 properties for slice 1
caching 5 properties for slice 2
caching 5 properties for slice 3
caching 5 properties for slice 4
caching 5 properties for slice 5
caching 5 properties for slice 6
caching 5 properties for slice 7
caching 5 properties for slice 8
caching 5 properties for slice 9
caching 5 properties for slice 10
caching 5 properties for slice 11
caching 5 properties for slice 12
caching 5 properties for slice 13
caching 5 properties for slice 14
caching 5 properties for slice 15
caching 5 properties for slice 16
caching 5 properties for slice 17
caching 5 properties for slice 18
caching 5 properties for slice 19
caching 5 properties for slice 20
caching 5 properties for slice 21
caching 5 properties for slice 22
caching 5 properties for slice 23
caching 5 properties for slice 24
caching 5 properties for slice 25
wrote animation HTML file to stergm.sim1.html
opening local URL file:///home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/ndtv.Rcheck/vign_test/ndtv/vignettes/stergm.sim1.html in web browser
caching 5 properties for slice 0
caching 5 properties for slice 1
caching 5 properties for slice 2
caching 5 properties for slice 3
caching 5 properties for slice 4
caching 5 properties for slice 5
caching 5 properties for slice 6
caching 5 properties for slice 7
caching 5 properties for slice 8
caching 5 properties for slice 9
caching 5 properties for slice 10
caching 5 properties for slice 11
caching 5 properties for slice 12
caching 5 properties for slice 13
caching 5 properties for slice 14
caching 5 properties for slice 15
caching 5 properties for slice 16
caching 5 properties for slice 17
caching 5 properties for slice 18
caching 5 properties for slice 19
caching 5 properties for slice 20
caching 5 properties for slice 21
caching 5 properties for slice 22
caching 5 properties for slice 23
caching 5 properties for slice 24
caching 5 properties for slice 25
Loading required namespace: htmlwidgets
loading ndtv-d3 animation widget...
Loading required namespace: scatterplot3d
Calculating layout for network slice from time  0 to 0
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  2.5 to 2.5
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  5 to 5
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  7.5 to 7.5
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  10 to 10
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  12.5 to 12.5
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  15 to 15
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  17.5 to 17.5
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  20 to 20
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  22.5 to 22.5
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  25 to 25
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  27.5 to 27.5
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  30 to 30
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
rendering 10 frames for slice 0
rendering 10 frames for slice 1
rendering 10 frames for slice 2
rendering 10 frames for slice 3
rendering 10 frames for slice 4
rendering 10 frames for slice 5
rendering 10 frames for slice 6
rendering 10 frames for slice 7
rendering 10 frames for slice 8
rendering 10 frames for slice 9
rendering 10 frames for slice 10
rendering 10 frames for slice 11
rendering 10 frames for slice 12
Calculating layout for network slice from time  0 to 2.5
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  2.5 to 5
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  5 to 7.5
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  7.5 to 10
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  10 to 12.5
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  12.5 to 15
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  15 to 17.5
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  17.5 to 20
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  20 to 22.5
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  22.5 to 25
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  25 to 27.5
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  27.5 to 30
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  30 to 32.5
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
rendering 10 frames for slice 0
rendering 10 frames for slice 1
rendering 10 frames for slice 2
rendering 10 frames for slice 3
rendering 10 frames for slice 4
rendering 10 frames for slice 5
rendering 10 frames for slice 6
rendering 10 frames for slice 7
rendering 10 frames for slice 8
rendering 10 frames for slice 9
rendering 10 frames for slice 10
rendering 10 frames for slice 11
rendering 10 frames for slice 12
Calculating layout for network slice from time  0 to 5
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  1 to 6
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  2 to 7
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  3 to 8
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  4 to 9
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  5 to 10
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  6 to 11
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  7 to 12
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  8 to 13
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  9 to 14
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  10 to 15
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  11 to 16
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  12 to 17
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  13 to 18
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  14 to 19
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  15 to 20
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  16 to 21
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  17 to 22
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  18 to 23
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  19 to 24
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  20 to 25
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  21 to 26
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  22 to 27
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  23 to 28
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  24 to 29
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  25 to 30
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  26 to 31
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  27 to 32
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  28 to 33
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  29 to 34
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
Calculating layout for network slice from time  30 to 35
The MDSJ Java library does not appear to be installed. The ndtv package can use MDSJ to provide a fast accurate layout algorithm. As the original hosting site is offline, it can temporarily be downloaded from https://github.com/skyebend/mdsj
The MDSJ library was not installed.
Warning in layout.fun(slice, dist.mat = dist.mat, default.dist = default.dist,  :
  Unable to locate the MDSJ library, using KamadaKawai layout instead
rendering 10 frames for slice 0
rendering 10 frames for slice 1
rendering 10 frames for slice 2
rendering 10 frames for slice 3
rendering 10 frames for slice 4
rendering 10 frames for slice 5
rendering 10 frames for slice 6
rendering 10 frames for slice 7
rendering 10 frames for slice 8
rendering 10 frames for slice 9
rendering 10 frames for slice 10
Killed