Error(s) in re-building vignettes:
  ...
--- re-building ‘AfterFitting.Rmd’ using rmarkdown
This is new software. Please report any bugs to the package maintainer.
Quitting from lines 78-82 (AfterFitting.Rmd) 
Error: processing vignette 'AfterFitting.Rmd' failed with diagnostics:
VECTOR_ELT() can only be applied to a 'list', not a 'double'
--- failed re-building ‘AfterFitting.Rmd’

--- re-building ‘MCMCsettings.Rmd’ using rmarkdown
This is new software. Please report any bugs to the package maintainer.
This is new software. Please report any bugs to the package maintainer.
This is new software. Please report any bugs to the package maintainer.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
Note: ordered factors are included as dummy variables into the linear predictor (not as orthogonal polynomials).
--- finished re-building ‘MCMCsettings.Rmd’

--- re-building ‘MinimalExample.Rmd’ using rmarkdown
This is new software. Please report any bugs to the package maintainer.
--- finished re-building ‘MinimalExample.Rmd’

--- re-building ‘ModelSpecification.Rmd’ using rmarkdown
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
Note: ordered factors are included as dummy variables into the linear predictor (not as orthogonal polynomials).
Note: 'mod2a' does not contain MCMC samples.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
Note: ordered factors are included as dummy variables into the linear predictor (not as orthogonal polynomials).
Note: 'mod2b' does not contain MCMC samples.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
Note: ordered factors are included as dummy variables into the linear predictor (not as orthogonal polynomials).
Note: 'mod2c' does not contain MCMC samples.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
This is new software. Please report any bugs to the package maintainer.
Note: ordered factors are included as dummy variables into the linear predictor (not as orthogonal polynomials).
This is new software. Please report any bugs to the package maintainer.
Note: ordered factors are included as dummy variables into the linear predictor (not as orthogonal polynomials).
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
Note: ordered factors are included as dummy variables into the linear predictor (not as orthogonal polynomials).
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
Note: ordered factors are included as dummy variables into the linear predictor (not as orthogonal polynomials).
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
Note: ordered factors are included as dummy variables into the linear predictor (not as orthogonal polynomials).
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
Note: ordered factors are included as dummy variables into the linear predictor (not as orthogonal polynomials).
--- finished re-building ‘ModelSpecification.Rmd’

--- re-building ‘SelectingParameters.Rmd’ using rmarkdown
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
Note: 'lm1' does not contain MCMC samples.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
Note: ordered factors are included as dummy variables into the linear predictor (not as orthogonal polynomials).
Note: 'lm2' does not contain MCMC samples.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
Note: ordered factors are included as dummy variables into the linear predictor (not as orthogonal polynomials).
Note: 'lm3' does not contain MCMC samples.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
Note: ordered factors are included as dummy variables into the linear predictor (not as orthogonal polynomials).
Note: 'lme1' does not contain MCMC samples.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
Note: ordered factors are included as dummy variables into the linear predictor (not as orthogonal polynomials).
Note: 'lme2' does not contain MCMC samples.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
Note: ordered factors are included as dummy variables into the linear predictor (not as orthogonal polynomials).
Note: 'lme3a' does not contain MCMC samples.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
Note: ordered factors are included as dummy variables into the linear predictor (not as orthogonal polynomials).
Note: 'lme3b' does not contain MCMC samples.
This is new software. Please report any bugs to the package maintainer.
Note: No MCMC sample will be created when n.iter is set to 0.
Note: 'lm4' does not contain MCMC samples.
This is new software. Please report any bugs to the package maintainer.
This is new software. Please report any bugs to the package maintainer.
Note: ordered factors are included as dummy variables into the linear predictor (not as orthogonal polynomials).
This is new software. Please report any bugs to the package maintainer.
Note: ordered factors are included as dummy variables into the linear predictor (not as orthogonal polynomials).
--- finished re-building ‘SelectingParameters.Rmd’

--- re-building ‘VisualizingIncompleteData.Rmd’ using rmarkdown
Quitting from lines 104-105 (VisualizingIncompleteData.Rmd) 
Error: processing vignette 'VisualizingIncompleteData.Rmd' failed with diagnostics:
VECTOR_ELT() can only be applied to a 'list', not a 'double'
--- failed re-building ‘VisualizingIncompleteData.Rmd’

SUMMARY: processing the following files failed:
  ‘AfterFitting.Rmd’ ‘VisualizingIncompleteData.Rmd’

Error: Vignette re-building failed.
Execution halted