Running 'Rgui.R' [3s]
  Running 'arules.R' [3s]
  Comparing 'arules.Rout' to 'arules.Rout.save' ... OK
  Running 'idlists.R' [3s]
  Comparing 'idlists.Rout' to 'idlists.Rout.save' ...71c71,72
< preprocessing ... P [0.02s]
---
> preprocessing ... P [0.004s]
> counting ... 2 sequence(s), processed 0/1 join(s) [0.00s]
  Running 'makebin.R' [3s]
  Comparing 'makebin.Rout' to 'makebin.Rout.save' ... OK
  Running 'native.R' [3s]
  Comparing 'native.Rout' to 'native.Rout.save' ... OK
  Running 'ptree.R' [11s]
  Comparing 'ptree.Rout' to 'ptree.Rout.save' ...31,33c31,33
< preprocessing ... 1 partition(s), 0 MB [0.06s]
< mining transactions ... 0.12 MB [0.06s]
< reading sequences ... [1.6s]
---
> preprocessing ... 1 partition(s), 0 MB [0.014s]
> mining transactions ... 0.11 MB [0.03s]
> reading sequences ... [1s]
35c35
< total elapsed time: 1.77s
---
> total elapsed time: 1.05s
38c38,41
< preprocessing ... [0.03s]
---
> preprocessing ... [0.02s]
> preparing ... 3917 sequences, created 4199 (0.09) nodes [0.00s]
> counting ... 10 transactions (4), processed 4908 (0.86, 0.04) nodes [0.00s]
> writing ... 3917 counts, processed 51210 (0.65) nodes [0.00s]
90,92c93,95
< preprocessing ... 1 partition(s), 0.35 MB [0.08s]
< mining transactions ... 0.31 MB [0.52s]
< reading sequences ... [3.4s]
---
> preprocessing ... 1 partition(s), 0.35 MB [0.039s]
> mining transactions ... 0.3 MB [0.48s]
> reading sequences ... [1.8s]
94c97
< total elapsed time: 4.04s
---
> total elapsed time: 2.354s
133c136,139
< preprocessing ... [0.15s]
---
> preprocessing ... [0.032s]
> preparing ... 8616 sequences, created 11328 (0.08) nodes [0.00s]
> counting ... 15391 transactions (1000), processed 37628159 (0.07, 0.29) nodes [0.34s]
> writing ... 8616 counts, processed 154653 (0.55) nodes [0.00s]
149a156,158
> preparing ... 8616 sequences, created 11328 (0.08) nodes [0.00s]
> counting ... 46821 transactions (8616), processed 1139646 (0.37, 0.11) nodes [0.01s]
> writing ... 8616 counts, processed 154653 (0.55) nodes [0.00s]
156a166
> checking ... 8616 counts [0.02s, 0.01s]
164a175
> checking ... 8616 counts [0.02s, 0.01s]
  Running 'similarity.R' [3s]
Running the tests in 'tests/similarity.R' failed.
Complete output:
  > 
  > library("arulesSequences")
  Loading required package: arules
  Loading required package: Matrix
  
  Attaching package: 'arules'
  
  The following objects are masked from 'package:base':
  
      abbreviate, write
  
  > 
  > ### ceeboo 2008, 2016
  > 
  > data(zaki)
  > 
  > z <- as(zaki, "timedsequences")
  > as(as(z, "sequences"), "data.frame")
                             sequence sequenceID
  1 <{C,D},{A,B,C},{A,B,F},{A,C,D,F}>          1
  2                     <{A,B,F},{E}>          2
  3                         <{A,B,F}>          3
  4           <{D,G,H},{B,F},{A,G,H}>          4
  > 
  > s <- similarity(z)
  > s
  4 x 4 sparse Matrix of class "dsCMatrix"
  Error in isFALSE(suppRows) : could not find function "isFALSE"
  Calls: <Anonymous> -> <Anonymous> -> printSpMatrix2
  Execution halted