Running examples in ‘bazar-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: get_all_pkgs
> ### Title: Packages exporting a function
> ### Aliases: get_all_pkgs
> 
> ### ** Examples
> 
> get_all_pkgs("as.fun")
WARNING: An illegal reflective access operation has occurred
WARNING: Illegal reflective access by weka.core.WekaPackageClassLoaderManager (file:/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RWekajars/java/weka.jar) to method java.lang.ClassLoader.defineClass(java.lang.String,byte[],int,int,java.security.ProtectionDomain)
WARNING: Please consider reporting this to the maintainers of weka.core.WekaPackageClassLoaderManager
WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
WARNING: All illegal access operations will be denied in a future release


Welcome to BRugs connected to OpenBUGS version 3.2.2
Found more than one class "family" in cache; using the first, from namespace 'MatrixModels'
Also defined by ‘lme4’
Found more than one class "family" in cache; using the first, from namespace 'MatrixModels'
Also defined by ‘lme4’
Found more than one class "family" in cache; using the first, from namespace 'MatrixModels'
Also defined by ‘lme4’
+----------------------------+                                          
|............................|                                          
|............................|                                          
|..............########......|  #######    #    ######    ###      #    
|..............########......|  #         # #   #     #    #      # #   
|.....####.....########......|  #        #   #  #     #    #     #   #  
|.....####.....########......|  #####   #     # ######     #    #     # 
|.....####...................|  #       ####### #     #    #    ####### 
|.....####...........###.....|  #       #     # #     #    #    #     # 
|....................###.....|  #       #     # ######    ###   #     # 
|....................###.....|                                          
|............................|                                          
+----------------------------+                                          

Citation: S. Hochreiter et al.,
FABIA: Factor Analysis for Bicluster Acquisition,
Bioinformatics 26(12):1520-1527, 2010.
BibTex: enter 'toBibtex(citation("fabia"))'

Homepage: http://www.bioinf.jku.at/software/fabia/fabia.html

FABIA Package Version 2.29.1

log4j:ERROR Could not find value for key log4j.appender.stdout
log4j:ERROR Could not instantiate appender named "stdout".
Warning in get_all_funs(pkg) :
  get_all_funs() returns 'character(0)' for package Deducer
Setting options('download.file.method.GEOquery'='auto')
Setting options('GEOquery.inmemory.gpl'=FALSE)


Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/cairoDevice/libs/cairoDevice.so':
  `maximal number of DLLs reached...

KEGG.db contains mappings based on older data because the original
  resource was removed from the the public domain before the most
  recent update was produced. This package should now be considered
  deprecated and future versions of Bioconductor may not have it
  available.  Users who want more current data are encouraged to look
  at the KEGGREST or reactome.db packages

Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/cairoDevice/libs/cairoDevice.so':
  `maximal number of DLLs reached...
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/cairoDevice/libs/cairoDevice.so':
  `maximal number of DLLs reached...
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/cairoDevice/libs/cairoDevice.so':
  `maximal number of DLLs reached...
Creating a generic function for 'toJSON' from package 'jsonlite' in package 'googleVis'
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/cairoDevice/libs/cairoDevice.so':
  `maximal number of DLLs reached...
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/cairoDevice/libs/cairoDevice.so':
  `maximal number of DLLs reached...
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/cairoDevice/libs/cairoDevice.so':
  `maximal number of DLLs reached...
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/cairoDevice/libs/cairoDevice.so':
  `maximal number of DLLs reached...
Warning in get_all_funs(pkg) :
  get_all_funs() returns 'character(0)' for package RGtk2
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/cairoDevice/libs/cairoDevice.so':
  `maximal number of DLLs reached...
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/cairoDevice/libs/cairoDevice.so':
  `maximal number of DLLs reached...
Error in py_module_import(module, convert = convert) : 
  ImportError: No module named magic
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/cairoDevice/libs/cairoDevice.so':
  `maximal number of DLLs reached...
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/cairoDevice/libs/cairoDevice.so':
  `maximal number of DLLs reached...
Killed