Running ‘testthat.R’ [9s/9s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(trialr)
  Loading required package: Rcpp
  > 
  > test_check("trialr")
  
  SAMPLING FOR MODEL 'CrmEmpiricNormalPrior' NOW (CHAIN 1).
  Chain 1: 
  Chain 1: Gradient evaluation took 3.7e-05 seconds
  Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.37 seconds.
  Chain 1: Adjust your expectations accordingly!
  Chain 1: 
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  Chain 1: 
  Chain 1:  Elapsed Time: 0.009423 seconds (Warm-up)
  Chain 1:                0.008497 seconds (Sampling)
  Chain 1:                0.01792 seconds (Total)
  Chain 1: 
  
  SAMPLING FOR MODEL 'CrmEmpiricNormalPrior' NOW (CHAIN 2).
  Chain 2: 
  Chain 2: Gradient evaluation took 1.2e-05 seconds
  Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0.12 seconds.
  Chain 2: Adjust your expectations accordingly!
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  Chain 2: 
  Chain 2:  Elapsed Time: 0.009596 seconds (Warm-up)
  Chain 2:                0.008401 seconds (Sampling)
  Chain 2:                0.017997 seconds (Total)
  Chain 2: 
  
  SAMPLING FOR MODEL 'CrmOneParamLogisticNormalPrior' NOW (CHAIN 1).
  Chain 1: 
  Chain 1: Gradient evaluation took 9.2e-05 seconds
  Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.92 seconds.
  Chain 1: Adjust your expectations accordingly!
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  Chain 1: 
  Chain 1:  Elapsed Time: 0.032783 seconds (Warm-up)
  Chain 1:                0.026406 seconds (Sampling)
  Chain 1:                0.059189 seconds (Total)
  Chain 1: 
  
  SAMPLING FOR MODEL 'CrmOneParamLogisticNormalPrior' NOW (CHAIN 2).
  Chain 2: 
  Chain 2: Gradient evaluation took 2.2e-05 seconds
  Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0.22 seconds.
  Chain 2: Adjust your expectations accordingly!
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  Chain 2: 
  Chain 2:  Elapsed Time: 0.030464 seconds (Warm-up)
  Chain 2:                0.034598 seconds (Sampling)
  Chain 2:                0.065062 seconds (Total)
  Chain 2: 
  
  SAMPLING FOR MODEL 'CrmOneParamLogisticNormalPrior' NOW (CHAIN 3).
  Chain 3: 
  Chain 3: Gradient evaluation took 1e-05 seconds
  Chain 3: 1000 transitions using 10 leapfrog steps per transition would take 0.1 seconds.
  Chain 3: Adjust your expectations accordingly!
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  Chain 3: 
  Chain 3:  Elapsed Time: 0.031272 seconds (Warm-up)
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  Chain 3:                0.064453 seconds (Total)
  Chain 3: 
  
  SAMPLING FOR MODEL 'CrmOneParamLogisticNormalPrior' NOW (CHAIN 4).
  Chain 4: 
  Chain 4: Gradient evaluation took 1.4e-05 seconds
  Chain 4: 1000 transitions using 10 leapfrog steps per transition would take 0.14 seconds.
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  Chain 4: 
  Chain 4:  Elapsed Time: 0.031897 seconds (Warm-up)
  Chain 4:                0.029887 seconds (Sampling)
  Chain 4:                0.061784 seconds (Total)
  Chain 4: 
  
  SAMPLING FOR MODEL 'EffTox' NOW (CHAIN 1).
  Chain 1: 
  Chain 1: Gradient evaluation took 7.3e-05 seconds
  Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.73 seconds.
  Chain 1: Adjust your expectations accordingly!
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  Chain 1: 
  Chain 1:  Elapsed Time: 0.090662 seconds (Warm-up)
  Chain 1:                0.037435 seconds (Sampling)
  Chain 1:                0.128097 seconds (Total)
  Chain 1: 
  
  SAMPLING FOR MODEL 'EffTox' NOW (CHAIN 2).
  Chain 2: 
  Chain 2: Gradient evaluation took 2.7e-05 seconds
  Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0.27 seconds.
  Chain 2: Adjust your expectations accordingly!
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  Chain 2: 
  Chain 2:  Elapsed Time: 0.100721 seconds (Warm-up)
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  Chain 2:                0.144833 seconds (Total)
  Chain 2: 
  
  SAMPLING FOR MODEL 'EffTox' NOW (CHAIN 1).
  Chain 1: 
  Chain 1: Gradient evaluation took 3.5e-05 seconds
  Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.35 seconds.
  Chain 1: Adjust your expectations accordingly!
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  Chain 1: 
  Chain 1:  Elapsed Time: 0.228507 seconds (Warm-up)
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  Chain 1:                0.384506 seconds (Total)
  Chain 1: 
  
  SAMPLING FOR MODEL 'EffTox' NOW (CHAIN 2).
  Chain 2: 
  Chain 2: Gradient evaluation took 2.5e-05 seconds
  Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0.25 seconds.
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  Chain 2:  Elapsed Time: 0.251011 seconds (Warm-up)
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  Chain 2:                0.432361 seconds (Total)
  Chain 2: 
  
  SAMPLING FOR MODEL 'EffTox' NOW (CHAIN 3).
  Chain 3: 
  Chain 3: Gradient evaluation took 2.3e-05 seconds
  Chain 3: 1000 transitions using 10 leapfrog steps per transition would take 0.23 seconds.
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  Chain 3: 
  Chain 3:  Elapsed Time: 0.242593 seconds (Warm-up)
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  Chain 3:                0.414872 seconds (Total)
  Chain 3: 
  
  SAMPLING FOR MODEL 'EffTox' NOW (CHAIN 4).
  Chain 4: 
  Chain 4: Gradient evaluation took 2.8e-05 seconds
  Chain 4: 1000 transitions using 10 leapfrog steps per transition would take 0.28 seconds.
  Chain 4: Adjust your expectations accordingly!
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  Chain 4:  Elapsed Time: 0.256076 seconds (Warm-up)
  Chain 4:                0.191044 seconds (Sampling)
  Chain 4:                0.44712 seconds (Total)
  Chain 4: 
  ── 1. Failure: Thall et al. (2014) model fits correctly to "1NNN 2ENN" (@test_st
  all(abs(mod$utility - c(-0.91, -0.47, 0.42, 0.64, 0.64)) < epsilon) isn't true.
  
  
  SAMPLING FOR MODEL 'EffTox' NOW (CHAIN 1).
  Chain 1: 
  Chain 1: Gradient evaluation took 6e-05 seconds
  Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.6 seconds.
  Chain 1: Adjust your expectations accordingly!
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  Chain 1: 
  Chain 1:  Elapsed Time: 0.236733 seconds (Warm-up)
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  Chain 1:                0.432058 seconds (Total)
  Chain 1: 
  
  SAMPLING FOR MODEL 'EffTox' NOW (CHAIN 2).
  Chain 2: 
  Chain 2: Gradient evaluation took 3.4e-05 seconds
  Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0.34 seconds.
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  Chain 2: 
  Chain 2:  Elapsed Time: 0.243023 seconds (Warm-up)
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  Chain 2:                0.412628 seconds (Total)
  Chain 2: 
  
  SAMPLING FOR MODEL 'EffTox' NOW (CHAIN 3).
  Chain 3: 
  Chain 3: Gradient evaluation took 1.6e-05 seconds
  Chain 3: 1000 transitions using 10 leapfrog steps per transition would take 0.16 seconds.
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  Chain 3: 
  Chain 3:  Elapsed Time: 0.219901 seconds (Warm-up)
  Chain 3:                0.166756 seconds (Sampling)
  Chain 3:                0.386657 seconds (Total)
  Chain 3: 
  
  SAMPLING FOR MODEL 'EffTox' NOW (CHAIN 4).
  Chain 4: 
  Chain 4: Gradient evaluation took 5.8e-05 seconds
  Chain 4: 1000 transitions using 10 leapfrog steps per transition would take 0.58 seconds.
  Chain 4: Adjust your expectations accordingly!
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  Chain 4: 
  Chain 4:  Elapsed Time: 0.252293 seconds (Warm-up)
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  Chain 4:                0.42114 seconds (Total)
  Chain 4: 
  ══ testthat results  ═══════════════════════════════════════════════════════════
  OK: 180 SKIPPED: 0 FAILED: 1
  1. Failure: Thall et al. (2014) model fits correctly to "1NNN 2ENN" (@test_stan_efftox.R#44) 
  
  Error: testthat unit tests failed
  Execution halted