Error(s) in re-building vignettes:
  ...
--- re-building ‘ctsem.rnw’ using knitr
Observations with missing time information found - removing 1 rows
Discrete time points created:  4
Extracting first non-missing value for time independent predictors
imputedefs==FALSE (default, recommended) so setting observations with no time value to NA
Running ctsemCarefulFit with 16 parameters

Beginning initial fit attempt

 Lowest minimum so far:  4345.84618843183

 OpenMx status code 6 not in list of acceptable status codes, (0,0)

 Not all eigenvalues of Hessian are greater than 0: 2781400099.67246, 959016.615002559, 193939.710398236, 120807.324495143, 2397.68735870303, 1602.71915371364, 746.925475307084, 435.77501472556, 335.677009526487, 82.280047821868, 77.646695707429, 0.243584871575008, 0.000456237696309928, 0.000110755322367954, 0.0000467295777426189, -202.002239599035

Beginning fit attempt 1 of at maximum 15 extra tries

 Lowest minimum so far:  4345.51974342798

 OpenMx status code 6 not in list of acceptable status codes, (0,0)

 Not all eigenvalues of Hessian are greater than 0: 3341117686.06814, 1145456.70482891, 175748.883000962, 131942.258815767, 2395.1404270832, 1346.27250577225, 718.90248639319, 338.214165689257, 320.156284107233, 80.614001652682, 51.1616999035079, 0.146549236340977, 0.00223031772994454, 0.0000352964958808608, -0.0000164918111350852, -60.9376958509356

Beginning fit attempt 2 of at maximum 15 extra tries

 Lowest minimum so far:  4344.85392303168

 OpenMx status code 6 not in list of acceptable status codes, (0,0)

 Not all eigenvalues of Hessian are greater than 0: 14223187313.6717, 4730841.22123706, 576830.036807925, 346034.037455157, 2397.05599968874, 1579.53589251496, 639.300607771846, 389.664400956465, 336.774787325735, 81.2416035991056, 45.2294786001518, 0.0341354483649126, 0.00244846559986561, 0.000361518823064477, -0.000127547377773881, -23.216104171156

Beginning fit attempt 3 of at maximum 15 extra tries

 Fit attempt worse than current best:  4358.17599312153 vs 4344.85392303168

Beginning fit attempt 4 of at maximum 15 extra tries

 Fit attempt worse than current best:  4369.34600232578 vs 4344.85392303168

Beginning fit attempt 5 of at maximum 15 extra tries

 Fit attempt worse than current best:  4345.38374236282 vs 4344.85392303168

Beginning fit attempt 6 of at maximum 15 extra tries

 Fit attempt worse than current best:  4377.16636138604 vs 4344.85392303168

Beginning fit attempt 7 of at maximum 15 extra tries

 Fit attempt worse than current best:  17603.5123029422 vs 4344.85392303168

Beginning fit attempt 8 of at maximum 15 extra tries

 Lowest minimum so far:  4176.87456133431

Solution found


Solution found!  Final fit=4176.8746 (started at 4727.4693)  (9 attempt(s): 9 valid, 0 errors)

Running ctsemCarefulFit with 15 parameters

Beginning initial fit attempt

 Lowest minimum so far:  4196.73541494077

Solution found


Solution found!  Final fit=4196.7354 (started at 4882.15)  (1 attempt(s): 1 valid, 0 errors)

NPSOL optimizer not available - switching to CSOLNP - consider installing OpenMx using command:  source('http://openmx.psyc.virginia.edu/getOpenMx.R') 
Running ctsem with 16 parameters
Running ctsemCarefulFit with 19 parameters

Beginning initial fit attempt

 Lowest minimum so far:  4151.13132113271

Solution found


Solution found!  Final fit=4151.1313 (started at 4301.6569)  (1 attempt(s): 1 valid, 0 errors)

Plotting fit
Plotting fit
Running ctsemCarefulFit with 23 parameters

Beginning initial fit attempt

 Lowest minimum so far:  4245.25700751458

Solution found


Solution found!  Final fit=4245.257 (started at 4370.0907)  (1 attempt(s): 1 valid, 0 errors)

MANIFESTMEANS contained character labels - setting matrix to 0
MANIFESTVAR contained character labels - setting matrix to diagonal 0.00001
TDPREDVAR contained character labels - setting matrix to diagonal 0.00001
Discrete time points created:  19
imputedefs==FALSE (default, recommended) so setting observations with no time value to NA
MANIFESTMEANS contained character labels - setting matrix to 0
MANIFESTVAR contained character labels - setting matrix to diagonal 0.00001
TDPREDVAR contained character labels - setting matrix to diagonal 0.00001
Discrete time points created:  19
imputedefs==FALSE (default, recommended) so setting observations with no time value to NA
MANIFESTMEANS contained character labels - setting matrix to 0
MANIFESTVAR contained character labels - setting matrix to diagonal 0.00001
TDPREDVAR contained character labels - setting matrix to diagonal 0.00001
Discrete time points created:  19
imputedefs==FALSE (default, recommended) so setting observations with no time value to NA
MANIFESTMEANS contained character labels - setting matrix to 0
MANIFESTVAR contained character labels - setting matrix to diagonal 0.00001
TDPREDVAR contained character labels - setting matrix to diagonal 0.00001
Discrete time points created:  19
imputedefs==FALSE (default, recommended) so setting observations with no time value to NA
No missing time dependent predictors - TDPREDVAR and TDPREDMEANS fixed to observed moments for speed
Running ctsemCarefulFit with 18 parameters

Beginning initial fit attempt

 Lowest minimum so far:  -477.756816321184

 Not all eigenvalues of Hessian are greater than 0: 6709.35185151051, 3468.20345875516, 522.980743392382, 304.061103549625, 140.637626311234, 98.3645719975857, 69.6230305704327, 48.3857957377269, 22.8517164916416, 20.1310465475527, 15.963321433692, 12.546682745029, 8.32094809238165, 7.10794579454276, 4.18742875319023, 2.89672588147804, 0.153421552757007, -0.00000830117301158251

Beginning fit attempt 1 of at maximum 15 extra tries

 Lowest minimum so far:  -477.756816349576

Solution found


Solution found!  Final fit=-477.75682 (started at -378.62728)  (2 attempt(s): 2 valid, 0 errors)

No missing time dependent predictors - TDPREDVAR and TDPREDMEANS fixed to observed moments for speed
transformedParams=TRUE and non positive DIFFUSION diagonal specified, setting to .00001.
Running ctsemCarefulFit with 18 parameters

Beginning initial fit attempt

 Lowest minimum so far:  -464.44985946927

 OpenMx status code 6 not in list of acceptable status codes, (0,0)

 Not all eigenvalues of Hessian are greater than 0: 24287.1090892912, 1192.59672906677, 114.06847888136, 34.4925728181617, 27.0929265488296, 25.6660515125482, 11.8237296419703, 7.52438639830523, 4.46222832823169, 2.95941638652114, 2.00614848483394, 1.0456339437581, 0.0435902482533143, 0.00524592027148591, 0.000624439378546061, 0.0000506326693473514, 0.000000965420936551977, -0.00000000000000930812359842289

Beginning fit attempt 1 of at maximum 15 extra tries

 Lowest minimum so far:  -464.451895572321

Solution found


Solution found!  Final fit=-464.4519 (started at 88.974358)  (2 attempt(s): 2 valid, 0 errors)

Single subject dataset or Kalman objective specified - ignoring any specified between subject 
      variance matrices (TRAITVAR, T0TRAITEFFECT,MANIFESTTRAITVAR, TIPREDEFFECT, TIPREDVAR, TDTIPREDCOV, T0TIPREDEFFECT)
Running ctsemCarefulFit with 11 parameters

Beginning initial fit attempt

 Lowest minimum so far:  -138.198676577048

Solution found


Solution found!  Final fit=-138.19868 (started at 670.38461)  (1 attempt(s): 1 valid, 0 errors)

Begin carefulFit start value estimation for group g1
Begin carefulFit start value estimation for group g2

Beginning initial fit attempt

 Lowest minimum so far:  -129.417753909793

Solution found


Solution found!  Final fit=-129.41775 (started at 6179.8858)  (1 attempt(s): 1 valid, 0 errors)

T0VAR contained character labels - setting matrix to diagonal 0.00001
T0MEANS contained character labels - setting matrix to 0
MANIFESTMEANS contained character labels - setting matrix to 0
Discrete time points created:  200
imputedefs==FALSE (default, recommended) so setting observations with no time value to NA
Plotting rows 1, 
Single subject dataset or Kalman objective specified - ignoring any specified between subject 
      variance matrices (TRAITVAR, T0TRAITEFFECT,MANIFESTTRAITVAR, TIPREDEFFECT, TIPREDVAR, TDTIPREDCOV, T0TIPREDEFFECT)
transformedParams=TRUE and non positive DIFFUSION diagonal specified, setting to .00001.
Running ctsemCarefulFit with 7 parameters

Beginning initial fit attempt

 Lowest minimum so far:  738.419875077806

Solution found


Solution found!  Final fit=738.41988 (started at 1245.3665)  (1 attempt(s): 1 valid, 0 errors)

transformedParams=TRUE and non positive DIFFUSION diagonal specified, setting to .00001.

Beginning initial fit attempt

 Lowest minimum so far:  -3462.15389492831

Solution found


Solution found!  Final fit=-3462.1539 (started at -3145.5663)  (1 attempt(s): 1 valid, 0 errors)

Running ctsemCarefulFit with 16 parameters

Beginning initial fit attempt

 Lowest minimum so far:  4190.7977758273

 Not all eigenvalues of Hessian are greater than 0: 160837.974983202, 43192.3333612445, 21269.5229739658, 8473.80295673972, 1625.15463603447, 1449.82352612066, 343.302784252528, 312.90828858995, 249.0705888761, 159.62804866534, 107.972977837089, 100.171266688371, 62.0746667759964, 20.0050449816844, 0.329815385402892, -0.0000000000000426325641456129

Beginning fit attempt 1 of at maximum 15 extra tries

 Lowest minimum so far:  4190.79777582628

Solution found


Solution found!  Final fit=4190.7978 (started at 4997.0475)  (2 attempt(s): 2 valid, 0 errors)

Running ctsemCarefulFit with 19 parameters

Beginning initial fit attempt

 Lowest minimum so far:  4151.13132113272

Solution found


Solution found!  Final fit=4151.1313 (started at 4301.6569)  (1 attempt(s): 1 valid, 0 errors)

NPSOL optimizer not available - switching to CSOLNP - consider installing OpenMx using command:  source('http://openmx.psyc.virginia.edu/getOpenMx.R') 
Running ctsem with 19 parameters
Running ctsemCarefulFit with 19 parameters

Beginning initial fit attempt

 Lowest minimum so far:  4203.31303213657

Solution found


Solution found!  Final fit=4203.313 (started at 4349.5532)  (1 attempt(s): 1 valid, 0 errors)

NPSOL optimizer not available - switching to CSOLNP - consider installing OpenMx using command:  source('http://openmx.psyc.virginia.edu/getOpenMx.R') 
Running ctsem with 19 parameters
--- finished re-building ‘ctsem.rnw’

--- re-building ‘hierarchical.rnw’ using knitr
Quitting from lines 114-151 (hierarchical.rnw) 
Error: processing vignette 'hierarchical.rnw' failed with diagnostics:
object ‘knit_hooks’ not found
--- failed re-building ‘hierarchical.rnw’

SUMMARY: processing the following file failed:
  ‘hierarchical.rnw’

Error: Vignette re-building failed.
Execution halted