Error(s) in re-building vignettes:
  ...
--- re-building ‘ctsem.rnw’ using knitr
Observations with missing time information found - removing 1 rows
Discrete time points created:  4
Extracting first non-missing value for time independent predictors
imputedefs==FALSE (default, recommended) so setting observations with no time value to NA
Running ctsemCarefulFit with 16 parameters

Beginning initial fit attempt

 Lowest minimum so far:  4345.85704965914

 OpenMx status code 6 not in list of acceptable status codes, (0,0)

 Not all eigenvalues of Hessian are greater than 0: 3025276234.97094, 1027772.76105094, 202840.599383073, 131009.6254217, 2390.92434411858, 1733.56240229181, 737.656728251163, 450.902317199587, 337.660105339132, 87.8485072027062, 81.2306042750578, 0.274195450755541, 0.00017189018157032, 0.0000136037835630938, -0.0000441226533961325, -345.273094458416

Beginning fit attempt 1 of at maximum 15 extra tries

 Lowest minimum so far:  4345.63675427699

 OpenMx status code 6 not in list of acceptable status codes, (0,0)

 Not all eigenvalues of Hessian are greater than 0: 3068696327.53377, 919462.730881126, 185223.313668631, 105745.46955202, 2404.8045096936, 1190.0942035333, 808.100329582061, 336.06664672927, 293.095293200804, 80.1378657460264, 72.0358778973945, 7.27862838057943, 0.00100715838876966, 0.00000607824952665219, -0.000064375028675515, -0.929713935657619

Beginning fit attempt 2 of at maximum 15 extra tries

 Lowest minimum so far:  4344.98630498651

 OpenMx status code 6 not in list of acceptable status codes, (0,0)

 Not all eigenvalues of Hessian are greater than 0: 12485178762.1022, 3641443.73187642, 447212.52427646, 321172.373100449, 2396.78133131925, 1527.62049656738, 681.79888840539, 387.605643064321, 336.160175182028, 81.2762914370872, 42.4050275704264, 5.5580970809399, 0.0386965696235385, 0.000850510096282118, 0.0000100946129401466, -0.000070438124169421

Beginning fit attempt 3 of at maximum 15 extra tries

 Fit attempt worse than current best:  4345.6273853634 vs 4344.98630498651

Beginning fit attempt 4 of at maximum 15 extra tries

 Fit attempt worse than current best:  4367.90998851759 vs 4344.98630498651

Beginning fit attempt 5 of at maximum 15 extra tries

 Fit attempt worse than current best:  4359.2054702813 vs 4344.98630498651

Beginning fit attempt 6 of at maximum 15 extra tries

 Fit attempt worse than current best:  4865.94856616849 vs 4344.98630498651

Beginning fit attempt 7 of at maximum 15 extra tries

 Fit attempt worse than current best:  4395.28740566715 vs 4344.98630498651

Beginning fit attempt 8 of at maximum 15 extra tries

 Lowest minimum so far:  4176.87456133428

Solution found


Solution found!  Final fit=4176.8746 (started at 4727.4693)  (9 attempt(s): 9 valid, 0 errors)

Running ctsemCarefulFit with 15 parameters

Beginning initial fit attempt

 Lowest minimum so far:  4196.73541494079

Solution found


Solution found!  Final fit=4196.7354 (started at 4882.15)  (1 attempt(s): 1 valid, 0 errors)

NPSOL optimizer not available - switching to CSOLNP - consider installing OpenMx using command:  source('http://openmx.psyc.virginia.edu/getOpenMx.R') 
Running ctsem with 16 parameters
Running ctsemCarefulFit with 19 parameters

Beginning initial fit attempt

 Lowest minimum so far:  4151.13132113271

Solution found


Solution found!  Final fit=4151.1313 (started at 4301.6569)  (1 attempt(s): 1 valid, 0 errors)

Plotting fit
Plotting fit
Running ctsemCarefulFit with 23 parameters

Beginning initial fit attempt

 Lowest minimum so far:  4245.2570075146

Solution found


Solution found!  Final fit=4245.257 (started at 4370.0898)  (1 attempt(s): 1 valid, 0 errors)

MANIFESTMEANS contained character labels - setting matrix to 0
MANIFESTVAR contained character labels - setting matrix to diagonal 0.00001
TDPREDVAR contained character labels - setting matrix to diagonal 0.00001
Discrete time points created:  19
imputedefs==FALSE (default, recommended) so setting observations with no time value to NA
MANIFESTMEANS contained character labels - setting matrix to 0
MANIFESTVAR contained character labels - setting matrix to diagonal 0.00001
TDPREDVAR contained character labels - setting matrix to diagonal 0.00001
Discrete time points created:  19
imputedefs==FALSE (default, recommended) so setting observations with no time value to NA
MANIFESTMEANS contained character labels - setting matrix to 0
MANIFESTVAR contained character labels - setting matrix to diagonal 0.00001
TDPREDVAR contained character labels - setting matrix to diagonal 0.00001
Discrete time points created:  19
imputedefs==FALSE (default, recommended) so setting observations with no time value to NA
MANIFESTMEANS contained character labels - setting matrix to 0
MANIFESTVAR contained character labels - setting matrix to diagonal 0.00001
TDPREDVAR contained character labels - setting matrix to diagonal 0.00001
Discrete time points created:  19
imputedefs==FALSE (default, recommended) so setting observations with no time value to NA
No missing time dependent predictors - TDPREDVAR and TDPREDMEANS fixed to observed moments for speed
Running ctsemCarefulFit with 18 parameters

Beginning initial fit attempt

 Lowest minimum so far:  -477.756816091883

Solution found


Solution found!  Final fit=-477.75682 (started at -378.62728)  (1 attempt(s): 1 valid, 0 errors)

No missing time dependent predictors - TDPREDVAR and TDPREDMEANS fixed to observed moments for speed
transformedParams=TRUE and non positive DIFFUSION diagonal specified, setting to .00001.
Running ctsemCarefulFit with 18 parameters

Beginning initial fit attempt

 Lowest minimum so far:  -464.451719088975

 OpenMx status code 6 not in list of acceptable status codes, (0,0)

 Not all eigenvalues of Hessian are greater than 0: 36452.4118620206, 1200.87792120504, 116.887836713988, 34.5266167527439, 26.9938885372416, 25.5700148130414, 11.8067955083843, 7.51410487781495, 4.44076980108636, 2.82537182433211, 2.00286256682685, 0.869083302890023, 0.0106912500444183, 0.00349844550717514, 0.000438369331371314, 0.0000516171206534574, 0.000000592485883531389, -0.00000000000000341697827027302

Beginning fit attempt 1 of at maximum 15 extra tries

 Lowest minimum so far:  -464.451898390146

Solution found


Solution found!  Final fit=-464.4519 (started at 88.974358)  (2 attempt(s): 2 valid, 0 errors)

Single subject dataset or Kalman objective specified - ignoring any specified between subject 
      variance matrices (TRAITVAR, T0TRAITEFFECT,MANIFESTTRAITVAR, TIPREDEFFECT, TIPREDVAR, TDTIPREDCOV, T0TIPREDEFFECT)
Running ctsemCarefulFit with 11 parameters

Beginning initial fit attempt

 Lowest minimum so far:  -138.198676577416

Solution found


Solution found!  Final fit=-138.19868 (started at 670.38461)  (1 attempt(s): 1 valid, 0 errors)

Begin carefulFit start value estimation for group g1
Begin carefulFit start value estimation for group g2
OMP: Warning #96: Cannot form a team with 10 threads, using 2 instead.
OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set).

Beginning initial fit attempt

 Lowest minimum so far:  -129.417753909793

Solution found


Solution found!  Final fit=-129.41775 (started at 6179.8858)  (1 attempt(s): 1 valid, 0 errors)

T0VAR contained character labels - setting matrix to diagonal 0.00001
T0MEANS contained character labels - setting matrix to 0
MANIFESTMEANS contained character labels - setting matrix to 0
Discrete time points created:  200
imputedefs==FALSE (default, recommended) so setting observations with no time value to NA
Plotting rows 1, 
Single subject dataset or Kalman objective specified - ignoring any specified between subject 
      variance matrices (TRAITVAR, T0TRAITEFFECT,MANIFESTTRAITVAR, TIPREDEFFECT, TIPREDVAR, TDTIPREDCOV, T0TIPREDEFFECT)
transformedParams=TRUE and non positive DIFFUSION diagonal specified, setting to .00001.
Running ctsemCarefulFit with 7 parameters

Beginning initial fit attempt

 Lowest minimum so far:  738.419875077806

Solution found


Solution found!  Final fit=738.41988 (started at 1245.3665)  (1 attempt(s): 1 valid, 0 errors)

transformedParams=TRUE and non positive DIFFUSION diagonal specified, setting to .00001.

Beginning initial fit attempt

 Lowest minimum so far:  -3462.15389492832

Solution found


Solution found!  Final fit=-3462.1539 (started at -3145.5663)  (1 attempt(s): 1 valid, 0 errors)

Running ctsemCarefulFit with 16 parameters

Beginning initial fit attempt

 Lowest minimum so far:  4190.79777582722

 Not all eigenvalues of Hessian are greater than 0: 160837.972562465, 43192.3679428252, 21269.5456382794, 8473.80461715315, 1625.18026712444, 1449.83707937379, 343.324990028389, 312.923849955446, 249.102797009127, 159.656098966452, 107.991153335545, 100.180007447747, 62.1041096503756, 20.0160961706942, 0.332647756784511, -0.0000000000000426325641456207

Beginning fit attempt 1 of at maximum 15 extra tries

 Lowest minimum so far:  4190.79777582664

Solution found


Solution found!  Final fit=4190.7978 (started at 4997.0475)  (2 attempt(s): 2 valid, 0 errors)

Running ctsemCarefulFit with 19 parameters

Beginning initial fit attempt

 Lowest minimum so far:  4151.13132113272

Solution found


Solution found!  Final fit=4151.1313 (started at 4301.6569)  (1 attempt(s): 1 valid, 0 errors)

NPSOL optimizer not available - switching to CSOLNP - consider installing OpenMx using command:  source('http://openmx.psyc.virginia.edu/getOpenMx.R') 
Running ctsem with 19 parameters
Running ctsemCarefulFit with 19 parameters

Beginning initial fit attempt

 Lowest minimum so far:  4203.31303234544

 Not all eigenvalues of Hessian are greater than 0: 94314.8310197235, 6623.116504527, 1636.1523526676, 1127.62164097167, 726.786237543391, 621.78221264138, 294.42778456506, 198.914001640179, 180.022855915759, 115.63616333384, 91.1959348555048, 71.0451303907574, 55.3242656998623, 26.0365990654221, 9.28021017659102, 5.38063228503748, 4.02505536624336, 2.87742690114492, -0.000000281022701969819

Beginning fit attempt 1 of at maximum 15 extra tries

 Lowest minimum so far:  4203.31303234444

Solution found


Solution found!  Final fit=4203.313 (started at 4349.5532)  (2 attempt(s): 2 valid, 0 errors)

NPSOL optimizer not available - switching to CSOLNP - consider installing OpenMx using command:  source('http://openmx.psyc.virginia.edu/getOpenMx.R') 
Running ctsem with 19 parameters
--- finished re-building ‘ctsem.rnw’

--- re-building ‘hierarchical.rnw’ using knitr
Quitting from lines 114-151 (hierarchical.rnw) 
Error: processing vignette 'hierarchical.rnw' failed with diagnostics:
object 'knit_hooks' not found
--- failed re-building ‘hierarchical.rnw’

SUMMARY: processing the following file failed:
  ‘hierarchical.rnw’

Error: Vignette re-building failed
Execution halted