Running ‘allier.R’ [1s/2s]
  Comparing ‘allier.Rout’ to ‘allier.Rout.save’ ... OK
  Running ‘blockkr.R’ [1s/2s]
  Comparing ‘blockkr.Rout’ to ‘blockkr.Rout.save’ ... OK
  Running ‘covtable.R’ [1s/2s]
  Comparing ‘covtable.Rout’ to ‘covtable.Rout.save’ ... OK
  Running ‘cv.R’ [1s/2s]
  Running ‘cv3d.R’ [2s/3s]
  Comparing ‘cv3d.Rout’ to ‘cv3d.Rout.save’ ... OK
  Running ‘fit.R’ [1s/2s]
  Comparing ‘fit.Rout’ to ‘fit.Rout.save’ ... OK
  Running ‘krige0.R’ [3s/4s]
  Comparing ‘krige0.Rout’ to ‘krige0.Rout.save’ ... OK
  Running ‘line.R’ [2s/3s]
  Comparing ‘line.Rout’ to ‘line.Rout.save’ ... OK
  Running ‘merge.R’ [1s/2s]
  Comparing ‘merge.Rout’ to ‘merge.Rout.save’ ...190c190
< c(        0,       0.5,         4)
---
> c(-4.44089e-16,       0.5,         4)
270,273c270,273
< c(      0.5, 1.38778e-17), # row 1
< c(      0.5, -1.38778e-17), # row 2
< c(2.77556e-17,       0.5), # row 3
< c(-4.16334e-17,       0.5)  # row 4
---
> c(      0.5, -1.38778e-17), # row 1
> c(      0.5, -2.77556e-17), # row 2
> c(1.38778e-17,       0.5), # row 3
> c(-1.38778e-17,       0.5)  # row 4
  Running ‘na.action.R’ [1s/2s]
  Comparing ‘na.action.Rout’ to ‘na.action.Rout.save’ ... OK
  Running ‘rings.R’ [2s/3s]
  Comparing ‘rings.Rout’ to ‘rings.Rout.save’ ... OK
  Running ‘sim.R’ [1s/2s]
  Comparing ‘sim.Rout’ to ‘sim.Rout.save’ ... OK
  Running ‘unproj.R’ [3s/3s]
  Comparing ‘unproj.Rout’ to ‘unproj.Rout.save’ ...5c5
< rgdal: version: 1.3-6, (SVN revision 773)
---
> rgdal: version: 1.2-16, (SVN revision 701)
7,8c7,8
<  Loaded GDAL runtime: GDAL 2.3.2, released 2018/09/21
<  Path to GDAL shared files: /usr/share/gdal
---
>  Loaded GDAL runtime: GDAL 2.2.1, released 2017/06/23
>  Path to GDAL shared files: /usr/share/gdal/2.2
10c10
<  Loaded PROJ.4 runtime: Rel. 5.2.0, September 15th, 2018, [PJ_VERSION: 520]
---
>  Loaded PROJ.4 runtime: Rel. 4.9.3, 15 August 2016, [PJ_VERSION: 493]
12c12
<  Linking to sp version: 1.3-1 
---
>  Linking to sp version: 1.2-6 
82c82
< Spam version 2.2-0 (2018-06-19) is loaded.
---
> Spam version 2.1-1 (2017-07-02) is loaded.
94,95d93
< See www.image.ucar.edu/~nychka/Fields for
<  a vignette and other supplements. 
  Running ‘variogram.R’ [1s/2s]
  Running ‘vdist.R’ [1s/2s]
  Comparing ‘vdist.Rout’ to ‘vdist.Rout.save’ ... OK
  Running ‘windst.R’ [4s/5s]
  Comparing ‘windst.Rout’ to ‘windst.Rout.save’ ...75c75
< rgdal: version: 1.3-6, (SVN revision 773)
---
> rgdal: version: 1.2-16, (SVN revision 701)
77,78c77,78
<  Loaded GDAL runtime: GDAL 2.3.2, released 2018/09/21
<  Path to GDAL shared files: /usr/share/gdal
---
>  Loaded GDAL runtime: GDAL 2.2.1, released 2017/06/23
>  Path to GDAL shared files: /usr/share/gdal/2.2
80c80
<  Loaded PROJ.4 runtime: Rel. 5.2.0, September 15th, 2018, [PJ_VERSION: 520]
---
>  Loaded PROJ.4 runtime: Rel. 4.9.3, 15 August 2016, [PJ_VERSION: 493]
82c82
<  Linking to sp version: 1.3-1 
---
>  Linking to sp version: 1.2-6 
Running the tests in ‘tests/cv.R’ failed.
Complete output:
  > # try bivariate cokriging; cross validate first variable
  > library(sp)
  > data(meuse)
  > library(gstat)
  > g=gstat(NULL, "log-zinc", log(zinc)~1,  ~x+y, meuse, nmax=10)
  > g=gstat(g, "log-lead", log(lead)~1,     ~x+y, meuse, nmax=10)
  > g=gstat(g, "log-copper", log(copper)~1, ~x+y, meuse, nmax=10)
  > v=variogram(g)
  Error in `[[<-.data.frame`(`*tmp*`, i, value = c(114, 598, 838, 914, 1094,  : 
    replacement has 30 rows, data has 15
  Calls: variogram ... [<-.data.frame -> xpdrows.data.frame -> [[<- -> [[<-.data.frame
  Execution halted
Running the tests in ‘tests/variogram.R’ failed.
Complete output:
  > library(sp)
  > library(gstat)
  > data(meuse)
  > variogram(log(zinc)~1, ~x+y, meuse)
      np       dist     gamma dir.hor dir.ver   id
  1   57   79.29244 0.1234479       0       0 var1
  2  299  163.97367 0.2162185       0       0 var1
  3  419  267.36483 0.3027859       0       0 var1
  4  457  372.73542 0.4121448       0       0 var1
  5  547  478.47670 0.4634128       0       0 var1
  6  533  585.34058 0.5646933       0       0 var1
  7  574  693.14526 0.5689683       0       0 var1
  8  564  796.18365 0.6186769       0       0 var1
  9  589  903.14650 0.6471479       0       0 var1
  10 543 1011.29177 0.6915705       0       0 var1
  11 500 1117.86235 0.7033984       0       0 var1
  12 477 1221.32810 0.6038770       0       0 var1
  13 452 1329.16407 0.6517158       0       0 var1
  14 457 1437.25620 0.5665318       0       0 var1
  15 415 1543.20248 0.5748227       0       0 var1
  > 
  > coordinates(meuse) <- ~ x + y                               
  > variogram(log(zinc)~1, meuse)
      np       dist     gamma dir.hor dir.ver   id
  1   57   79.29244 0.1234479       0       0 var1
  2  299  163.97367 0.2162185       0       0 var1
  3  419  267.36483 0.3027859       0       0 var1
  4  457  372.73542 0.4121448       0       0 var1
  5  547  478.47670 0.4634128       0       0 var1
  6  533  585.34058 0.5646933       0       0 var1
  7  574  693.14526 0.5689683       0       0 var1
  8  564  796.18365 0.6186769       0       0 var1
  9  589  903.14650 0.6471479       0       0 var1
  10 543 1011.29177 0.6915705       0       0 var1
  11 500 1117.86235 0.7033984       0       0 var1
  12 477 1221.32810 0.6038770       0       0 var1
  13 452 1329.16407 0.6517158       0       0 var1
  14 457 1437.25620 0.5665318       0       0 var1
  15 415 1543.20248 0.5748227       0       0 var1
  > 
  > ind=seq(1,155,2)
  > var1= meuse[ind,]
  > var2= meuse[-ind,]
  > g <- gstat(NULL, id = "lead", form = lead ~ 1, data=var1)
  > g <- gstat(g, id = "zinc", form = zinc ~ 1, data=var2)
  > v.cross <- variogram(g)
  Error in `[[<-.data.frame`(`*tmp*`, i, value = c(42, 166, 204, 232, 264,  : 
    replacement has 30 rows, data has 15
  Calls: variogram ... [<-.data.frame -> xpdrows.data.frame -> [[<- -> [[<-.data.frame
  Execution halted