Running ‘test-all.R’ [103s/152s]
Running the tests in ‘tests/test-all.R’ failed.
Complete output:
  > library(testthat)
  > test_check("EpiModel")
  Loading required package: EpiModel
  Loading required package: deSolve
  Loading required package: networkDynamic
  Loading required package: network
  network: Classes for Relational Data
  Version 1.13.0.1 created on 2015-08-31.
  copyright (c) 2005, Carter T. Butts, University of California-Irvine
                      Mark S. Handcock, University of California -- Los Angeles
                      David R. Hunter, Penn State University
                      Martina Morris, University of Washington
                      Skye Bender-deMoll, University of Washington
   For citation information, type citation("network").
   Type help("network-package") to get started.
  
  
  networkDynamic: version 0.9.0, created on 2016-01-12
  Copyright (c) 2016, Carter T. Butts, University of California -- Irvine
                      Ayn Leslie-Cook, University of Washington
                      Pavel N. Krivitsky, University of Wollongong
                      Skye Bender-deMoll, University of Washington
                      with contributions from
                      Zack Almquist, University of California -- Irvine
                      David R. Hunter, Penn State University
                      Li Wang
                      Kirk Li, University of Washington
                      Steven M. Goodreau, University of Washington
                      Jeffrey Horner
                      Martina Morris, University of Washington
  Based on "statnet" project software (statnet.org).
  For license and citation information see statnet.org/attribution
  or type citation("networkDynamic").
  
  Loading required package: tergm
  Loading required package: ergm
  
  ergm: version 3.9.4, created on 2018-08-15
  Copyright (c) 2018, Mark S. Handcock, University of California -- Los Angeles
                      David R. Hunter, Penn State University
                      Carter T. Butts, University of California -- Irvine
                      Steven M. Goodreau, University of Washington
                      Pavel N. Krivitsky, University of Wollongong
                      Martina Morris, University of Washington
                      with contributions from
                      Li Wang
                      Kirk Li, University of Washington
                      Skye Bender-deMoll, University of Washington
  Based on "statnet" project software (statnet.org).
  For license and citation information see statnet.org/attribution
  or type citation("ergm").
  
  NOTE: Versions before 3.6.1 had a bug in the implementation of the bd()
  constriant which distorted the sampled distribution somewhat. In
  addition, Sampson's Monks datasets had mislabeled vertices. See the
  NEWS and the documentation for more details.
  
  
  tergm: version 3.5.2, created on 2018-08-18
  Copyright (c) 2018, Pavel N. Krivitsky, University of Wollongong
                      Mark S. Handcock, University of California -- Los Angeles
                      with contributions from
                      David R. Hunter, Penn State University
                      Steven M. Goodreau, University of Washington
                      Martina Morris, University of Washington
                      Nicole Bohme Carnegie, New York University
                      Carter T. Butts, University of California -- Irvine
                      Ayn Leslie-Cook, University of Washington
                      Skye Bender-deMoll
                      Li Wang
                      Kirk Li, University of Washington
  Based on "statnet" project software (statnet.org).
  For license and citation information see statnet.org/attribution
  or type citation("tergm").
  
  
  * Starting Network Simulation
  Sim = 1/5
  Sim = 2/5
  Sim = 3/5
  Sim = 4/5
  Sim = 5/5
  * Starting Network Simulation
  Sim = 1/5
  Sim = 2/5
  Sim = 3/5
  Sim = 4/5
  Sim = 5/5EpiModel Network Diagnostics
  =======================
  Diagnostic Method: Dynamic
  Simulations: 1
  Time Steps per Sim: 10
  
  Formation Diagnostics
  ----------------------- 
        Target Sim Mean Pct Diff Sim SD
  edges     15     11.5   -0.233  1.509
  
  Dissolution Diagnostics
  ----------------------- 
                 Target Sim Mean Pct Diff Sim SD
  Edge Duration   20.00      NaN      NaN     NA
  Pct Edges Diss   0.05    0.043   -0.138  0.058
  EpiModel Network Diagnostics
  =======================
  Diagnostic Method: Dynamic
  Simulations: 2
  Time Steps per Sim: 10
  
  Formation Diagnostics
  ----------------------- 
        Target Sim Mean Pct Diff Sim SD
  edges     15       15        0  1.717
  
  Dissolution Diagnostics
  ----------------------- 
                 Target Sim Mean Pct Diff Sim SD
  Edge Duration   20.00    3.000   -0.850  2.828
  Pct Edges Diss   0.05    0.051    0.026  0.053
  EpiModel Network Diagnostics
  =======================
  Diagnostic Method: Dynamic
  Simulations: 2
  Time Steps per Sim: 10
  
  Formation Diagnostics
  ----------------------- 
             Target Sim Mean Pct Diff Sim SD
  edges          15     17.0    0.133  3.642
  concurrent     NA      8.1       NA  1.586
  
  Dissolution Diagnostics
  ----------------------- 
                 Target Sim Mean Pct Diff Sim SD
  Edge Duration   20.00    3.000   -0.850  2.121
  Pct Edges Diss   0.05    0.046   -0.082  0.049
  EpiModel Network Diagnostics
  =======================
  Diagnostic Method: Dynamic
  Simulations: 2
  Time Steps per Sim: 10
  
  Formation Diagnostics
  ----------------------- 
          Target Sim Mean Pct Diff Sim SD
  meandeg     NA     0.59       NA  0.071
  edges       15       NA       NA     NA
  
  Dissolution Diagnostics
  ----------------------- 
                 Target Sim Mean Pct Diff Sim SD
  Edge Duration   20.00    4.000   -0.800     NA
  Pct Edges Diss   0.05    0.038   -0.236  0.053
  ── 1. Error: Edges only models (@test-netdx.R#53)  ─────────────────────────────
  argument of length 0
  1: plot(dx4, type = "duration") at testthat/test-netdx.R:53
  2: plot.netdx(dx4, type = "duration")
  
  EpiModel Network Diagnostics
  =======================
  Diagnostic Method: Dynamic
  Simulations: 2
  Time Steps per Sim: 50
  
  Formation Diagnostics
  ----------------------- 
                      Target Sim Mean Pct Diff Sim SD
  edges                   15    15.53    0.035  2.414
  offset(mix.loc.0.1)     NA     0.00       NA  0.000
  
  Dissolution Diagnostics
  ----------------------- 
                 Target Sim Mean Pct Diff Sim SD
  Edge Duration  40.000   16.417   -0.590 13.534
  Pct Edges Diss  0.025    0.015   -0.381  0.031
  EpiModel Network Diagnostics
  =======================
  Diagnostic Method: Dynamic
  Simulations: 2
  Time Steps per Sim: 50
  
  Formation Diagnostics
  ----------------------- 
                Target Sim Mean Pct Diff Sim SD
  edges             15   11.450   -0.237  2.096
  meandeg           NA    0.458       NA  0.084
  concurrent        NA    3.000       NA  1.428
  nodematch.loc     NA   11.450       NA  2.096
  
  Dissolution Diagnostics
  ----------------------- 
                 Target Sim Mean Pct Diff Sim SD
  Edge Duration  40.000   18.438   -0.539 11.308
  Pct Edges Diss  0.025    0.026    0.036  0.047
  EpiModel Network Diagnostics
  =======================
  Diagnostic Method: Dynamic
  Simulations: 2
  Time Steps per Sim: 50
  
  Formation Diagnostics
  ----------------------- 
              Target Sim Mean Pct Diff Sim SD
  edges           15    12.56   -0.163  0.925
  mix.loc.0.1      0     0.00      NaN  0.000
  
  Dissolution Diagnostics
  ----------------------- 
                 Target Sim Mean Pct Diff Sim SD
  Edge Duration  40.000   12.500   -0.687  8.165
  Pct Edges Diss  0.025    0.027    0.087  0.041
  
  Network Diagnostics
  -----------------------
  - Simulating 250 networks
  - Calculating formation statistics
  * Starting Network Simulation
  Sim = 1/1
  1/10	
  2/10	
  3/10	
  4/10	
  5/10	
  6/10	
  7/10	
  8/10	
  9/10	
  10/10	══ testthat results  ═══════════════════════════════════════════════════════════
  OK: 286 SKIPPED: 76 FAILED: 1
  1. Error: Edges only models (@test-netdx.R#53) 
  
  Error: testthat unit tests failed
  Execution halted