Running ‘testthat.R’ [8s/39s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(BioInstaller)
  > 
  > 
  > test_check("BioInstaller")
  cloning into '/home/hornik/tmp/scratch/RtmpUALUvr/github_demo0'...
  Receiving objects:  16% (1/6),    0 kb
  Receiving objects:  33% (2/6),    0 kb
  Receiving objects:  50% (3/6),    0 kb
  Receiving objects:  66% (4/6),    0 kb
  Receiving objects:  83% (5/6),    0 kb
  Receiving objects: 100% (6/6),    0 kb, done.
  cloning into '/home/hornik/tmp/scratch/RtmpUALUvr/github_demo2'...
  Receiving objects:  16% (1/6),    0 kb
  Receiving objects:  33% (2/6),    0 kb
  Receiving objects:  50% (3/6),    0 kb
  Receiving objects:  66% (4/6),    0 kb
  Receiving objects:  83% (5/6),    0 kb
  Receiving objects: 100% (6/6),    0 kb, done.
  trying URL 'https://raw.githubusercontent.com/Miachol/ftp/master/files/GRCh37_MT_ensGene.txt'
  Content type 'text/plain; charset=utf-8' length 3131 bytes
  ==================================================
  downloaded 3131 bytes
  
  trying URL 'https://raw.githubusercontent.com/Miachol/ftp/master/files/GRCh37_MT_ensGene.txt'
  Content type 'text/plain; charset=utf-8' length 3131 bytes
  ==================================================
  downloaded 3131 bytes
  
  trying URL 'https://raw.githubusercontent.com/Miachol/ftp/master/files/GRCh37_MT_ensGene.txt'
  Content type 'text/plain; charset=utf-8' length 3131 bytes
  ==================================================
  downloaded 3131 bytes
  
  cloning into '/home/hornik/tmp/scratch/RtmpUALUvr/github_demo3'...
  Receiving objects:  16% (1/6),    0 kb
  Receiving objects:  33% (2/6),    0 kb
  Receiving objects:  50% (3/6),    0 kb
  Receiving objects:  66% (4/6),    0 kb
  Receiving objects:  83% (5/6),    0 kb
  Receiving objects: 100% (6/6),    0 kb, done.
  cloning into '/home/hornik/tmp/scratch/RtmpUALUvr/github_demo'...
  Receiving objects:  16% (1/6),    0 kb
  Receiving objects:  33% (2/6),    0 kb
  Receiving objects:  50% (3/6),    0 kb
  Receiving objects:  66% (4/6),    0 kb
  Receiving objects:  83% (5/6),    0 kb
  Receiving objects: 100% (6/6),    0 kb, done.
  cloning into '/home/hornik/tmp/scratch/RtmpUALUvr/denpendence1'...
  Receiving objects:  16% (1/6),    0 kb
  Receiving objects:  33% (2/6),    0 kb
  Receiving objects:  50% (3/6),    0 kb
  Receiving objects:  66% (4/6),    0 kb
  Receiving objects:  83% (5/6),    0 kb
  Receiving objects: 100% (6/6),    0 kb, done.
  /home/hornik/tmp/scratch/RtmpUALUvr/destdir.initial not empty, overwrite?[y]
  Please input y/n/Y/N!
  /home/hornik/tmp/scratch/RtmpUALUvr/destdir.initial not empty, overwrite?[y]
  Please input y/n/Y/N!
  /home/hornik/tmp/scratch/RtmpUALUvr/destdir.initial not empty, overwrite?[y]
  More than 3 counts input, default is not to overwrite.
  /home/hornik/tmp/scratch/RtmpUALUvr/destdir.initial existed, overwrite?[y]
  Please input y/n/Y/N!
  /home/hornik/tmp/scratch/RtmpUALUvr/destdir.initial existed, overwrite?[y]
  Please input y/n/Y/N!
  /home/hornik/tmp/scratch/RtmpUALUvr/destdir.initial existed, overwrite?[y]
  More than 3 counts input, default is not to overwrite.
  trying URL 'ftp://ftp.sjtu.edu.cn/pub/CPAN/clpa//README'
  Content type 'unknown' length 107 bytes
  ==================================================
  trying URL 'ftp://ftp.sjtu.edu.cn/pub/CPAN/clpa//index.html'
  Content type 'unknown' length 3574 bytes
  ==================================================
  ── 1. Failure: nongithub.versions (@test_versions.R#6)  ────────────────────────
  `x` not equal to `expected`.
  1 element mismatch
  
  ══ testthat results  ═══════════════════════════════════════════════════════════
  OK: 69 SKIPPED: 0 FAILED: 1
  1. Failure: nongithub.versions (@test_versions.R#6) 
  
  Error: testthat unit tests failed
  In addition: Warning message:
  In for (i in seq_along(members)) { :
    closing unused connection 4 (http://research-pub.gene.com/gmap/src/)
  Execution halted