Running 'testthat.R' [48s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(DBI)
  > library(annovarR)
  > 
  > 
  > test_check("annovarR")
  D:\Compiler\perl-basic\bin\perl.exe d:\opt\bin\annovar\table_annovar.pl D:\temp\Rtmpm2y0ki\file2a440552b4eb6 d:\opt\bin\annovar\humandb -buildver hg19  -remove -protocol refGene -operation g -nastring NA  
  D:\Compiler\perl-basic\bin\perl.exe d:\opt\bin\annovar\table_annovar.pl d:\tmp\test.vcf d:\opt\bin\annovar\humandb -buildver hg19 -out D:\temp\Rtmpm2y0ki\file2a4403f7a351f -remove  -protocol ensGene -operation g -nastring NA  -vcfinput
  trying URL 'https://raw.githubusercontent.com/Miachol/ftp/master/files/GRCh37_MT_ensGene.txt'
  -- 1. Failure: download.database (@test_download.R#9)  -------------------------
  `x` not equal to `expected`.
  1 element mismatch
  
  -- 2. Failure: download.database (@test_download.R#12)  ------------------------
  `x` not equal to `expected`.
  1 element mismatch
  
  -- 3. Failure: download.database (@test_download.R#14)  ------------------------
  `x` not equal to `expected`.
  'is.NA' value mismatch: 0 in current 1 in target
  
  d:\Rcompile\CRANpkg\local\3.6\annovarR.Rcheck\tests\testthat\perl C:\Users\CRAN\Documents\tmp\annovar.dir\annotate_variation.pl -downdb -buildver hg19 -webfrom annovar avsnp147 C:\Users\CRAN\Documents\tmp\annovar.dir\humandb
  d:\Rcompile\CRANpkg\local\3.6\annovarR.Rcheck\tests\testthat\perl C:\Users\CRAN\Documents\tmp\annovar.dir\annotate_variation.pl -buildver hg19  C:\Users\CRAN\Documents\tmp\annovar.dir\humandb
  d:\Rcompile\CRANpkg\local\3.6\annovarR.Rcheck\tests\testthat\perl C:\Users\CRAN\Documents\tmp\annovar.dir\annotate_variation.pl  -regionanno -buildver hg19 -dbtype cytoBand  C:\Users\CRAN\Documents\tmp\annovar.dir\humandb
  d:\Rcompile\CRANpkg\local\3.6\annovarR.Rcheck\tests\testthat\perl C:\Users\CRAN\Documents\tmp\annovar.dir\annotate_variation.pl -filter -buildver hg19 -dbtype avsnp147  C:\Users\CRAN\Documents\tmp\annovar.dir\humandb
  d:\Rcompile\CRANpkg\local\3.6\annovarR.Rcheck\tests\testthat\perl C:\Users\CRAN\Documents\tmp\annovar.dir\table_annovar.pl d:\Rcompile\CRANpkg\local\3.6\annovarR.Rcheck\tests\testthat\example.avinput C:\Users\CRAN\Documents\tmp\annovar.dir\humandb -buildver hg19  -remove -protocol refGene,cytoBand,avsnp147 -operation g,r,f -nastring NA  
  d:\Rcompile\CRANpkg\local\3.6\annovarR.Rcheck\tests\testthat\perl C:\Users\CRAN\Documents\tmp\annovar.dir\convert2annovar.pl -format vcf4old d:\Rcompile\CRANpkg\local\3.6\annovarR.Rcheck\tests\testthat\example.vcf > d:\Rcompile\CRANpkg\local\3.6\annovarR.Rcheck\tests\testthat\example.avinput
  vep --cache_version 91 --assembly GRCh37 --dir C:\Users\CRAN\Documents/.vep --output_file variant_effect_output.txt --cache --offline --everything 
  vcfanno_linux64 -p 2 D:/temp/RtmpgpaAmq/RLIBS_1d75833152983/annovarR/extdata/demo/vcfanno_demo/conf.toml input.vcf > output.vcf
  INFO [2018-08-17 15:00:24] info.msg
  [1] "print.vb"
  == testthat results  ===========================================================
  OK: 89 SKIPPED: 0 FAILED: 3
  1. Failure: download.database (@test_download.R#9) 
  2. Failure: download.database (@test_download.R#12) 
  3. Failure: download.database (@test_download.R#14) 
  
  Error: testthat unit tests failed
  Execution halted