Running ‘test-all.R’ [101s/153s]
Running the tests in ‘tests/test-all.R’ failed.
Complete output:
  > library("testthat")
  > Sys.setenv("_R_CHECK_LENGTH_1_CONDITION_" = TRUE)
  > test_check("RNeXML")
  Loading required package: RNeXML
  Loading required package: ape
  Namespace prefix xhtml on div is not defined
  A nexml object representing:
   	 0 phylogenetic tree blocks, where: 
   	 block 1 contains NULL phylogenetic trees
  	 block 0 contains  phylogenetic trees 
   	 19 meta elements 
   	 0 character matrices 
   	 0 taxonomic units 
   Taxa: 	  ... 
  
   NeXML generated by RNeXML using schema version: 0.9 
   size: 23.2 Kb 
  Done simulation(s).
  ── 1. Error: taxize_nexml throws appropriate warnings (@test_taxonomy.R#46)  ───
  Error in the HTTP2 framing layer
  1: expect_warning(taxize_nexml(chir1, "NCBI")) at testthat/test_taxonomy.R:46
  2: quasi_capture(enquo(object), capture_warnings, label = label)
  3: capture(act$val <- eval_bare(get_expr(quo), get_env(quo)))
  4: withCallingHandlers(code, warning = function(condition) {
         out$push(condition)
         invokeRestart("muffleWarning")
     })
  5: eval_bare(get_expr(quo), get_env(quo))
  6: taxize_nexml(chir1, "NCBI")
  7: get_uid(nexml@otus[[j]]@otu[[i]]@label)
  8: ldply(sciname, fun, ask, messages, rows, ...)
  9: llply(.data = .data, .fun = .fun, ..., .progress = .progress, .inform = .inform, 
         .parallel = .parallel, .paropts = .paropts)
  10: structure(lapply(pieces, .fun, ...), dim = dim(pieces))
  11: lapply(pieces, .fun, ...)
  12: FUN(X[[i]], ...)
  13: repeat_until_it_works(try_again_errors, "esearch", query = query_args, ...)
  14: cli$get(sprintf("entrez/eutils/%s.fcgi", path), query = tc(query))
  15: private$make_request(rr)
  16: crul_fetch(opts)
  17: curl::curl_fetch_memory(x$url$url, handle = x$url$handle)
  
  ══ testthat results  ═══════════════════════════════════════════════════════════
  OK: 177 SKIPPED: 3 FAILED: 1
  1. Error: taxize_nexml throws appropriate warnings (@test_taxonomy.R#46) 
  
  Error: testthat unit tests failed
  Execution halted