boot.compute.fj: no visible global function definition for
  ‘supplementaryCols’
caChiTest: no visible global function definition for ‘pchisq’
caChiTest: no visible global function definition for ‘pnorm’
epCA.inference.battery : permute.components.ca: no visible global
  function definition for ‘epCA’
epCA.inference.battery: no visible global function definition for
  ‘epCA’
epCA.inference.battery: no visible global function definition for
  ‘txtProgressBar’
epCA.inference.battery: no visible global function definition for
  ‘setTxtProgressBar’
epGPCA.inference.battery : permute.components.pca: no visible global
  function definition for ‘epGPCA’
epGPCA.inference.battery: no visible global function definition for
  ‘epGPCA’
epGPCA.inference.battery: no visible global function definition for
  ‘txtProgressBar’
epGPCA.inference.battery: no visible global function definition for
  ‘setTxtProgressBar’
epMCA.inference.battery : permute.components.mca: no visible global
  function definition for ‘epMCA’
epMCA.inference.battery: no visible global function definition for
  ‘makeNominalData’
epMCA.inference.battery: no visible global function definition for
  ‘epMCA’
epMCA.inference.battery: no visible global function definition for
  ‘txtProgressBar’
epMCA.inference.battery: no visible global function definition for
  ‘setTxtProgressBar’
epPCA.inference.battery : permute.components.pca: no visible global
  function definition for ‘epPCA’
epPCA.inference.battery: no visible global function definition for
  ‘epPCA’
epPCA.inference.battery: no visible global function definition for
  ‘txtProgressBar’
epPCA.inference.battery: no visible global function definition for
  ‘setTxtProgressBar’
inGraphs: no visible global function definition for
  ‘createColorVectorsByDesign’
inGraphs: no visible global function definition for
  ‘calculateConstraints’
inGraphs: no visible global function definition for ‘prettyPlot’
inGraphs: no visible global function definition for ‘prettyBars’
Undefined global functions or variables:
  calculateConstraints createColorVectorsByDesign epCA epGPCA epMCA
  epPCA makeNominalData pchisq pnorm prettyBars prettyPlot
  setTxtProgressBar supplementaryCols txtProgressBar
Consider adding
  importFrom("stats", "pchisq", "pnorm")
  importFrom("utils", "setTxtProgressBar", "txtProgressBar")
to your NAMESPACE file.