Running 'testthat.R' [43s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(taxa)
  
  Attaching package: 'taxa'
  
  The following object is masked from 'package:testthat':
  
      matches
  
  > 
  > test_check("taxa")
  -- 1. Error: Taxmap can be intialized from queried data (@test--taxmap_parsers.R
  Failed to connect to eutils.ncbi.nlm.nih.gov port 443: Timed out
  1: lookup_tax_data(raw_data, type = "taxon_name", datasets = list(counts = abundance, 
         my_names = common_names, foods = foods), mappings = c(species_id = "id", species_id = "{{name}}", 
         `{{index}}` = "{{index}}"), column = "species") at testthat/test--taxmap_parsers.R:154
  2: lookup_funcs[[type]](query)
  3: tryCatch(msgs <- utils::capture.output(raw_result <- map_unique(my_names, lookup_all), 
         type = "message"), error = function(e) stop(e))
  4: tryCatchList(expr, classes, parentenv, handlers)
  5: tryCatchOne(expr, names, parentenv, handlers[[1L]])
  6: value[[3L]](cond)
  
  -- 2. Error: Taxmap can be intialized from raw strings (@test--taxmap_parsers.R#
  Timeout was reached: Operation timed out after 10015 milliseconds with 0 out of 0 bytes received
  1: extract_tax_data(raw_data, key = c(var_1 = "info", var_2 = "taxon_id", tax = "info"), 
         regex = "^>var_1:(.+)--var_2:(.+)--non_target--tax:(.+)$") at testthat/test--taxmap_parsers.R:246
  2: lookup_tax_data(tax_data = parsed_input, type = my_type, column = names(my_type), 
         database = database, include_tax_data = include_tax_data)
  3: lookup_funcs[[type]](query)
  4: tryCatch(msgs <- utils::capture.output(raw_result <- map_unique(ids, lookup_all), 
         type = "message"), error = function(e) stop(e))
  5: tryCatchList(expr, classes, parentenv, handlers)
  6: tryCatchOne(expr, names, parentenv, handlers[[1L]])
  7: value[[3L]](cond)
  
  == testthat results  ===========================================================
  OK: 572 SKIPPED: 0 FAILED: 2
  1. Error: Taxmap can be intialized from queried data (@test--taxmap_parsers.R#154) 
  2. Error: Taxmap can be intialized from raw strings (@test--taxmap_parsers.R#246) 
  
  Error: testthat unit tests failed
  Execution halted