ARTIVAnet: no visible global function definition for ‘write.table’
ARTIVAnet: no visible global function definition for ‘pdf’
ARTIVAnet: no visible global function definition for ‘par’
ARTIVAnet: no visible global function definition for ‘dev.off’
ARTIVAsubnet: no visible global function definition for ‘pdf.options’
ARTIVAsubnet: no visible global function definition for ‘write.table’
ARTIVAsubnetAnalysis: no visible global function definition for
  ‘write.table’
ARTIVAsubnetAnalysis: no visible global function definition for ‘pdf’
ARTIVAsubnetAnalysis: no visible global function definition for ‘par’
ARTIVAsubnetAnalysis: no visible global function definition for
  ‘dev.off’
PSRF: no visible binding for global variable ‘var’
PlotFunction: no visible global function definition for ‘plot’
bdu: no visible global function definition for ‘runif’
choosePriors: no visible global function definition for ‘par’
choosePriors: no visible global function definition for ‘plot’
cp.birth: no visible global function definition for ‘rgamma’
cp.birth: no visible global function definition for ‘runif’
cp.death: no visible global function definition for ‘runif’
cp.shift: no visible global function definition for ‘runif’
geneNetworkSummary: no visible global function definition for ‘title’
main: no visible global function definition for ‘rgamma’
main: no visible global function definition for ‘runif’
plotCP.postDist: no visible global function definition for ‘par’
plotCP.postDist: no visible global function definition for ‘barplot’
plotCP.postDist: no visible global function definition for ‘abline’
plotCP.postDist: no visible global function definition for ‘plot’
plotSegmentModel.postDist: no visible global function definition for
  ‘par’
plotSegmentModel.postDist: no visible global function definition for
  ‘barplot’
plotSegmentModel.postDist: no visible global function definition for
  ‘title’
plotSegmentModel.postDist: no visible global function definition for
  ‘abline’
readInput: no visible global function definition for ‘read.table’
rinvgamma: no visible global function definition for ‘rgamma’
sampleBinit: no visible global function definition for ‘rnorm’
sampleParms: no visible global function definition for ‘rgamma’
segment.update: no visible global function definition for ‘rgamma’
segment.update: no visible global function definition for ‘runif’
traceGeneProfiles: no visible global function definition for ‘par’
traceGeneProfiles: no visible global function definition for ‘plot’
traceGeneProfiles: no visible global function definition for ‘lines’
traceGeneProfiles: no visible global function definition for ‘axis’
traceNetworks: no visible global function definition for ‘par’
traceNetworks: no visible global function definition for ‘legend’
Undefined global functions or variables:
  abline axis barplot dev.off legend lines par pdf pdf.options plot
  read.table rgamma rnorm runif title var write.table
Consider adding
  importFrom("grDevices", "dev.off", "pdf", "pdf.options")
  importFrom("graphics", "abline", "axis", "barplot", "legend", "lines",
             "par", "plot", "title")
  importFrom("stats", "rgamma", "rnorm", "runif", "var")
  importFrom("utils", "read.table", "write.table")
to your NAMESPACE file.