ConvertResults: no visible global function definition for '%do%'
ConvertResults: no visible global function definition for 'foreach'
PlotAllVar: no visible global function definition for 'melt'
PlotAllVar: no visible global function definition for 'ggplot'
PlotAllVar: no visible global function definition for 'aes'
PlotAllVar: no visible global function definition for 'geom_line'
PlotAllVar: no visible global function definition for 'facet_wrap'
PlotAllVar: no visible global function definition for 'theme'
PlotAllVar: no visible global function definition for 'element_text'
PlotAllVar: no visible global function definition for 'labs'
PlotComp1vsComp2: no visible global function definition for 'ggplot'
PlotComp1vsComp2: no visible global function definition for
  'aes_string'
PlotComp1vsComp2: no visible global function definition for
  'geom_point'
PlotComp1vsComp2: no visible global function definition for 'aes'
PlotComp1vsComp2: no visible global function definition for 'xlab'
PlotComp1vsComp2: no visible global function definition for 'ylab'
PlotComp1vsComp2: no visible global function definition for 'labs'
PlotDensComp1vsComp2: no visible global function definition for
  'ggplot'
PlotDensComp1vsComp2: no visible global function definition for
  'aes_string'
PlotDensComp1vsComp2: no visible global function definition for
  'stat_bin2d'
PlotDensComp1vsComp2: no visible global function definition for
  'geom_density2d'
PlotDensComp1vsComp2: no visible global function definition for 'theme'
PlotFH: no visible global function definition for 'ggplot'
PlotFH: no visible global function definition for 'aes'
PlotFH: no visible global function definition for 'geom_step'
PlotFH: no visible global function definition for 'xlab'
PlotFH: no visible global function definition for 'ylab'
PlotFH: no visible global function definition for 'theme'
PlotHist: no visible global function definition for 'hist'
PlotHistBin: no visible global function definition for 'hist'
PlotHistBin: no visible global function definition for 'abline'
PlotLogTheta: no visible global function definition for '%do%'
PlotLogTheta: no visible global function definition for 'foreach'
PlotLogTheta: no visible global function definition for 'melt'
PlotLogTheta: no visible global function definition for 'ggplot'
PlotLogTheta: no visible global function definition for 'aes'
PlotLogTheta: no visible global function definition for 'geom_line'
PlotLogTheta: no visible global function definition for 'geom_vline'
PlotLogTheta: no visible global function definition for 'theme'
PlotNbins: no visible global function definition for 'ggplot'
PlotNbins: no visible global function definition for 'aes_string'
PlotNbins: no visible global function definition for 'geom_step'
PlotNbins: no visible global function definition for 'ylim'
PlotNbins: no visible global function definition for 'ylab'
PlotNbins: no visible global function definition for 'xlab'
PlotNbins: no visible global function definition for 'theme'
adaptiveMH: no visible global function definition for 'runif'
binning.constructor: no visible global function definition for 'new'
createMixtureTarget : rmixture: no visible global function definition
  for 'rmultinom'
createMixtureTarget : rmixture: no visible global function definition
  for 'rnorm'
createMixtureTarget : rprior: no visible global function definition for
  'rgamma'
createMixtureTarget : rprior: no visible global function definition for
  'rnorm'
createTrimodalTarget : generate: no visible global function definition
  for 'rmvnorm'
fastdmvnorm: no visible global function definition for 'mahalanobis'
fastlogdmvnorm: no visible global function definition for 'mahalanobis'
fastrmvnorm: no visible global function definition for 'rnorm'
pawl: no visible global function definition for 'runif'
preexplorationAMH: no visible global function definition for 'quantile'
proposal.constructor: no visible global function definition for 'new'
smc: no visible global function definition for 'cov'
smc: no visible global function definition for 'runif'
smcparameters.constructor: no visible global function definition for
  'new'
systematic_resampling: no visible global function definition for
  'runif'
target.constructor: no visible global function definition for 'new'
tuningparameters.constructor: no visible global function definition for
  'new'
show,smcparameters: no visible global function definition for 'tail'
Undefined global functions or variables:
  %do% abline aes aes_string cov element_text facet_wrap foreach
  geom_density2d geom_line geom_point geom_step geom_vline ggplot hist
  labs mahalanobis melt new quantile rgamma rmultinom rmvnorm rnorm
  runif stat_bin2d tail theme xlab ylab ylim
Consider adding
  importFrom("graphics", "abline", "hist")
  importFrom("methods", "new")
  importFrom("stats", "cov", "mahalanobis", "quantile", "rgamma",
             "rmultinom", "rnorm", "runif")
  importFrom("utils", "tail")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').