Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Building shared library for Rcpp code chunk...
Building shared library for Rcpp code chunk...
In file included from /home/ripley/R/Lib32/BH/include/boost/bind/mem_fn.hpp:25:0,
                 from /home/ripley/R/Lib32/BH/include/boost/mem_fn.hpp:22,
                 from /home/ripley/R/Lib32/BH/include/boost/function/detail/prologue.hpp:18,
                 from /home/ripley/R/Lib32/BH/include/boost/function.hpp:30,
                 from /home/ripley/R/Lib32/BH/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /home/ripley/R/Lib32/BH/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /home/ripley/R/Lib32/BH/include/boost/algorithm/string/iter_find.hpp:27,
                 from /home/ripley/R/Lib32/BH/include/boost/algorithm/string/split.hpp:16,
                 from /home/ripley/R/Lib32/BH/include/boost/algorithm/string.hpp:23,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/io/wkt/read.hpp:29,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/io/wkt/wkt.hpp:17,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/strategies/cartesian/buffer_end_round.hpp:25,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/strategies/strategies.hpp:47,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/geometry.hpp:50,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry.hpp:17,
                 from file385e3d514a1a.cpp:8:
/home/ripley/R/Lib32/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
 template<class T> T * get_pointer(std::auto_ptr<T> const& p)
                                        ^
In file included from /opt/csw/include/c++/5.2.0/bits/locale_conv.h:41:0,
                 from /opt/csw/include/c++/5.2.0/locale:43,
                 from /opt/csw/include/c++/5.2.0/iomanip:43,
                 from /home/ripley/R/Lib32/Rcpp/include/RcppCommon.h:61,
                 from /home/ripley/R/Lib32/Rcpp/include/Rcpp.h:27,
                 from file385e3d514a1a.cpp:5:
/opt/csw/include/c++/5.2.0/bits/unique_ptr.h:49:28: note: declared here
   template<typename> class auto_ptr;
                            ^
In file included from /home/ripley/R/Lib32/BH/include/boost/scoped_ptr.hpp:13:0,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/index/detail/rtree/query_iterators.hpp:14,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/index/rtree.hpp:81,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/algorithms/detail/within/multi_point.hpp:33,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/algorithms/detail/within/implementation.hpp:44,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/algorithms/detail/covered_by/implementation.hpp:26,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/algorithms/covered_by.hpp:24,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/algorithms/detail/distance/point_to_geometry.hpp:42,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/strategies/cartesian/centroid_weighted_length.hpp:25,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/strategies/strategies.hpp:56,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/geometry.hpp:50,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry.hpp:17,
                 from file385e3d514a1a.cpp:8:
/home/ripley/R/Lib32/BH/include/boost/smart_ptr/scoped_ptr.hpp:74:31: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
     explicit scoped_ptr( std::auto_ptr<T> p ) BOOST_SP_NOEXCEPT : px( p.release() )
                               ^
In file included from /opt/csw/include/c++/5.2.0/bits/locale_conv.h:41:0,
                 from /opt/csw/include/c++/5.2.0/locale:43,
                 from /opt/csw/include/c++/5.2.0/iomanip:43,
                 from /home/ripley/R/Lib32/Rcpp/include/RcppCommon.h:61,
                 from /home/ripley/R/Lib32/Rcpp/include/Rcpp.h:27,
                 from file385e3d514a1a.cpp:5:
/opt/csw/include/c++/5.2.0/bits/unique_ptr.h:49:28: note: declared here
   template<typename> class auto_ptr;
                            ^
Building shared library for Rcpp code chunk...
In file included from /home/ripley/R/Lib32/BH/include/boost/bind/mem_fn.hpp:25:0,
                 from /home/ripley/R/Lib32/BH/include/boost/mem_fn.hpp:22,
                 from /home/ripley/R/Lib32/BH/include/boost/function/detail/prologue.hpp:18,
                 from /home/ripley/R/Lib32/BH/include/boost/function.hpp:30,
                 from /home/ripley/R/Lib32/BH/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /home/ripley/R/Lib32/BH/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /home/ripley/R/Lib32/BH/include/boost/algorithm/string/iter_find.hpp:27,
                 from /home/ripley/R/Lib32/BH/include/boost/algorithm/string/split.hpp:16,
                 from /home/ripley/R/Lib32/BH/include/boost/algorithm/string.hpp:23,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/io/wkt/read.hpp:29,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/io/wkt/wkt.hpp:17,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/strategies/cartesian/buffer_end_round.hpp:25,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/strategies/strategies.hpp:47,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/geometry.hpp:50,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry.hpp:17,
                 from file385e7e304e6a.cpp:8:
/home/ripley/R/Lib32/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
 template<class T> T * get_pointer(std::auto_ptr<T> const& p)
                                        ^
In file included from /opt/csw/include/c++/5.2.0/bits/locale_conv.h:41:0,
                 from /opt/csw/include/c++/5.2.0/locale:43,
                 from /opt/csw/include/c++/5.2.0/iomanip:43,
                 from /home/ripley/R/Lib32/Rcpp/include/RcppCommon.h:61,
                 from /home/ripley/R/Lib32/Rcpp/include/Rcpp.h:27,
                 from file385e7e304e6a.cpp:5:
/opt/csw/include/c++/5.2.0/bits/unique_ptr.h:49:28: note: declared here
   template<typename> class auto_ptr;
                            ^
In file included from /home/ripley/R/Lib32/BH/include/boost/scoped_ptr.hpp:13:0,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/index/detail/rtree/query_iterators.hpp:14,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/index/rtree.hpp:81,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/algorithms/detail/within/multi_point.hpp:33,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/algorithms/detail/within/implementation.hpp:44,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/algorithms/detail/covered_by/implementation.hpp:26,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/algorithms/covered_by.hpp:24,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/algorithms/detail/distance/point_to_geometry.hpp:42,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/strategies/cartesian/centroid_weighted_length.hpp:25,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/strategies/strategies.hpp:56,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry/geometry.hpp:50,
                 from /home/ripley/R/Lib32/BH/include/boost/geometry.hpp:17,
                 from file385e7e304e6a.cpp:8:
/home/ripley/R/Lib32/BH/include/boost/smart_ptr/scoped_ptr.hpp:74:31: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
     explicit scoped_ptr( std::auto_ptr<T> p ) BOOST_SP_NOEXCEPT : px( p.release() )
                               ^
In file included from /opt/csw/include/c++/5.2.0/bits/locale_conv.h:41:0,
                 from /opt/csw/include/c++/5.2.0/locale:43,
                 from /opt/csw/include/c++/5.2.0/iomanip:43,
                 from /home/ripley/R/Lib32/Rcpp/include/RcppCommon.h:61,
                 from /home/ripley/R/Lib32/Rcpp/include/Rcpp.h:27,
                 from file385e7e304e6a.cpp:5:
/opt/csw/include/c++/5.2.0/bits/unique_ptr.h:49:28: note: declared here
   template<typename> class auto_ptr;
                            ^
Building shared library for Rcpp code chunk...
make: Warning: Ignoring DistributedMake -j option
make: Warning: Ignoring DistributedMake -j option
make: Fatal error: Don't know how to make target `file385e29062269.o'
Current working directory /tmp/RtmpzGaWlC/sourceCpp-i386-pc-solaris2.10-0.12.16/sourcecpp_385e78d33829
`/home/ripley/R/cc/etc/Makeconf' is up to date.
`/home/ripley/R/cc/etc/Makeconf' is up to date.
Quitting from lines 781-836 (methods.Rmd) 
Error: processing vignette 'methods.Rmd' failed with diagnostics:
Error occurred building shared library.
Execution halted