Running '001.setupExampleData,annotationData.R' [14s]
  Running '002.setupExampleData,rawData.R' [3s]
  Running 'AffymetrixCdfFile.R' [4s]
  Running 'AffymetrixCelFile.R' [2s]
  Running 'AffymetrixCelSet.R' [4s]
Running the tests in 'tests/002.setupExampleData,rawData.R' failed.
Last 13 lines of output:
    at #03. createLink(link = pathnameD, target = pathnameS, skip = TRUE)
            - createLink() is in environment 'R.utils'
  
    at #02. setupExampleData.AromaAffymetrix(aroma.affymetrix, dirs = "rawData", 
                mustWork = FALSE)
            - setupExampleData.AromaAffymetrix() is in environment 'aroma.affymetrix'
  
    at #01. setupExampleData(aroma.affymetrix, dirs = "rawData", mustWork = FALSE)
            - setupExampleData() is in environment 'aroma.affymetrix'
  
  Error: Failed to create file link: rawData/FusionSDK_HG-Focus/HG-Focus/HG-Focus-1-121502.CEL[.lnk] -> D:/temp/Rtmpg7GqGQ/RLIBS_30901bcf6fc3/AffymetrixDataTestFiles/rawData/FusionSDK_HG-Focus/HG-Focus/2.Calvin/HG-Focus-1-121502.CEL
  In addition: Warning message:
  In system(cmd, intern = intern, wait = wait | intern, show.output.on.console = wait,  :
    running command 'C:\Windows\system32\cmd.exe /c mklink "rawData/FusionSDK_HG-Focus/HG-Focus/HG-Focus-1-121502.CEL" "D:/temp/Rtmpg7GqGQ/RLIBS_30901bcf6fc3/AffymetrixDataTestFiles/rawData/FusionSDK_HG-Focus/HG-Focus/2.Calvin/HG-Focus-1-121502.CEL"' had status 1
  Execution halted
Running the tests in 'tests/AffymetrixCdfFile.R' failed.
Last 13 lines of output:
            - createLink() is in environment 'R.utils'
  
    at #02. setupExampleData.AromaAffymetrix(aroma.affymetrix, dataset = "FusionSDK_Test3", 
                dirs = "annotationData", mustWork = FALSE)
            - setupExampleData.AromaAffymetrix() is in environment 'aroma.affymetrix'
  
    at #01. setupExampleData(aroma.affymetrix, dataset = "FusionSDK_Test3", 
                dirs = "annotationData", mustWork = FALSE)
            - setupExampleData() is in environment 'aroma.affymetrix'
  
  Error: Failed to create file link: annotationData/chipTypes/Test3/Test3.CDF[.lnk] -> D:/temp/Rtmpg7GqGQ/RLIBS_30901bcf6fc3/AffymetrixDataTestFiles/annotationData/chipTypes/Test3/1.XDA/Test3.CDF
  In addition: Warning message:
  In system(cmd, intern = intern, wait = wait | intern, show.output.on.console = wait,  :
    running command 'C:\Windows\system32\cmd.exe /c mklink "annotationData/chipTypes/Test3/Test3.CDF" "D:/temp/Rtmpg7GqGQ/RLIBS_30901bcf6fc3/AffymetrixDataTestFiles/annotationData/chipTypes/Test3/1.XDA/Test3.CDF"' had status 1
  Execution halted
Running the tests in 'tests/AffymetrixCelSet.R' failed.
Last 13 lines of output:
  
    at #04. createLink.default(link = pathnameD, target = pathnameS, skip = TRUE)
            - createLink.default() is in environment 'R.utils'
  
    at #03. createLink(link = pathnameD, target = pathnameS, skip = TRUE)
            - createLink() is in environment 'R.utils'
  
    at #02. setupExampleData.AromaAffymetrix(aroma.affymetrix, mustWork = FALSE)
            - setupExampleData.AromaAffymetrix() is in environment 'aroma.affymetrix'
  
    at #01. setupExampleData(aroma.affymetrix, mustWork = FALSE)
            - setupExampleData() is in environment 'aroma.affymetrix'
  
  Error: Pathname not found: rawData/FusionSDK_HG-Focus/HG-Focus/HG-Focus-1-121502.CEL (rawData/FusionSDK_HG-Focus/HG-Focus/ exists, but nothing beyond; current directory is 'd:/Rcompile/CRANpkg/local/3.5/aroma.affymetrix.Rcheck/tests')
  Execution halted