Running ‘allocArray.R’
  Running ‘allocMatrix.R’
  Running ‘allocVector.R’
  Running ‘anyMissing.R’
  Running ‘anyMissing_subset.R’
  Running ‘benchmark.R’ [14s/18s]
  Running ‘binCounts.R’
  Running ‘binCounts_subset.R’
  Running ‘binMeans,binCounts.R’
  Running ‘binMeans,binCounts_subset.R’
  Running ‘count.R’
  Running ‘count_subset.R’
  Running ‘diff2.R’
  Running ‘diff2_subset.R’
  Running ‘indexByRow.R’
  Running ‘logSumExp.R’
  Running ‘logSumExp_subset.R’
  Running ‘mean2.R’
  Running ‘mean2_subset.R’
  Running ‘product.R’
  Running ‘product_subset.R’
  Running ‘psortKM.R’
  Running ‘rowAllAnys.R’
  Running ‘rowAllAnys_subset.R’
  Running ‘rowAvgsPerColSet.R’
  Running ‘rowAvgsPerColSet_subset.R’
  Running ‘rowCollapse.R’
  Running ‘rowCollapse_subset.R’
  Running ‘rowCounts.R’
  Running ‘rowCounts_subset.R’
  Running ‘rowCumMinMaxs.R’
  Running ‘rowCumMinMaxs_subset.R’
  Running ‘rowCumprods.R’
  Running ‘rowCumprods_subset.R’
  Running ‘rowCumsums.R’
  Running ‘rowCumsums_subset.R’
  Running ‘rowDiffs.R’
  Running ‘rowDiffs_subset.R’
  Running ‘rowIQRs.R’
  Running ‘rowIQRs_subset.R’
  Running ‘rowLogSumExps.R’
  Running ‘rowLogSumExps_subset.R’
  Running ‘rowMads.R’
  Running ‘rowMads_subset.R’
  Running ‘rowMeans2.R’
  Running ‘rowMeans2_subset.R’
  Running ‘rowMedians.R’
  Running ‘rowMedians_subset.R’
  Running ‘rowOrderStats.R’
  Running ‘rowOrderStats_subset.R’
  Running ‘rowProds.R’
  Running ‘rowProds_subset.R’
  Running ‘rowQuantiles.R’
  Running ‘rowQuantiles_subset.R’
  Running ‘rowRanges.R’
  Running ‘rowRanges_subset.R’
  Running ‘rowRanks.R’
  Running ‘rowRanks_subset.R’
  Running ‘rowSds.R’
  Running ‘rowSds_subset.R’
  Running ‘rowSums2.R’
  Running ‘rowSums2_subset.R’
  Running ‘rowTabulates.R’
  Running ‘rowTabulates_subset.R’
  Running ‘rowVarDiffs.R’
  Running ‘rowVarDiffs_mad,iqr_subset.R’ [11s/18s]
  Running ‘rowVarDiffs_var,sd_subset.R’ [9s/10s]
  Running ‘rowVars.R’
  Running ‘rowVars_subset.R’
  Running ‘rowWeightedMeans.R’
  Running ‘rowWeightedMeans_subset.R’
  Running ‘rowWeightedMedians.R’
  Running ‘rowWeightedMedians_subset.R’
  Running ‘rowWeightedVars.R’
  Running ‘rowWeightedVars_subset.R’
  Running ‘signTabulate.R’
  Running ‘signTabulate_subset.R’
  Running ‘sum2.R’
  Running ‘sum2_subset.R’
  Running ‘validateIndices.R’
  Running ‘varDiff_etal.R’
  Running ‘varDiff_etal_subset.R’
  Running ‘weightedMean.R’
  Running ‘weightedMean_subset.R’
  Running ‘weightedMedian.R’
  Running ‘weightedMedian_subset.R’
  Running ‘weightedVar.R’
  Running ‘weightedVar_etal.R’
  Running ‘weightedVar_etal_subset.R’
  Running ‘x_OP_y.R’
  Running ‘x_OP_y_subset.R’
  Running ‘zzz.package-unload.R’
Running the tests in ‘tests/benchmark.R’ failed.
Complete output:
  > ## 1. Don't test with valgrind
  > ## 2. Test only R (>= 3.0.2) because of that's what knitr requires
  > if  (getRversion() >= "3.0.2" && Sys.getenv("_R_CHECK_USE_VALGRIND_") == "") {
  + 
  + ## 3. Make sure all suggested packages are installed / can be loaded
  + pkgs <- c("base64enc", "ggplot2", "knitr", "microbenchmark",
  +           "R.devices", "R.rsp")
  + if (all(unlist(lapply(pkgs, FUN = requireNamespace)))) {
  +   html <- matrixStats:::benchmark("binCounts")
  +   print(html)
  + }
  + 
  + rm(list = "pkgs")
  + 
  + }
  Loading required namespace: base64enc
  Loading required namespace: ggplot2
  Loading required namespace: knitr
  Loading required namespace: microbenchmark
  Loading required namespace: R.devices
  Loading required namespace: R.rsp
  integer: unsorted
  Error in microbenchmark(binCounts = binCounts(x, bx = bx), hist = binCounts_hist(x,  : 
    Measured negative execution time! Please investigate and/or contact the package author.
  Calls: <Anonymous> ... <Anonymous> -> withVisible -> eval -> eval -> microbenchmark
  Execution halted