Error in re-building vignettes:
  ...
Loading required package: Rcpp

Attaching package: 'dplyr'

The following objects are masked from 'package:stats':

    filter, lag

The following objects are masked from 'package:base':

    intersect, setdiff, setequal, union

Joining, by = "gene"
Joining, by = "cell"
Joining, by = "gene"
Joining, by = "gene"
Joining, by = "gene"
Joining, by = "gene"
Joining, by = "gene"
Joining, by = "gene"
Joining, by = "gene"
Joining, by = "cell"
Joining, by = c("cell", "capture")
Have 35 cells after filtering
Joining, by = "cell"
Have 20 genes after filtering
Joining, by = "gene"
Joining, by = "gene"
Joining, by = "gene"
Joining, by = "cell"
Joining, by = c("cell", "capture")
Compiling model
DIAGNOSTIC(S) FROM PARSER:
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.
Warning (non-fatal): Comments beginning with # are deprecated.  Please use // in place of # for line comments.

the number of chains is less than 1; sampling not done
Saving compiled model to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/DeLorean/extdata/exact-sizes.rds
Quitting from lines 145-146 (DeLorean.Rmd) 
Error: processing vignette ‘DeLorean.Rmd’ failed with diagnostics:
cannot open the connection
Execution halted