Error in re-building vignettes:
  ...

Attaching package: 'dplyr'

The following objects are masked from 'package:stats':

    filter, lag

The following objects are masked from 'package:base':

    intersect, setdiff, setequal, union

Note: show_basis assumes spherical distance functions when plotting

 *** caught segfault ***
address 0x2, cause 'memory not mapped'

Traceback:
 1: .External("mergeXts", all = all[1:2], fill = fill, setclass = setclass,     symnames = symnames, suffixes = suffixes, retside = retside,     env = new.env(), tzone = tzone, ..., PACKAGE = "xts")
 2: merge.xts(..., all = all, fill = fill, suffixes = suffixes)
 3: cbind(deparse.level, ...)
 4: cbind(x@time, 1:nrow(x@time))
 5: sp_pols[, i]
 6: sp_pols[, i]
 7: FUN(X[[i]], ...)
 8: lapply(seq_along(sp_pols@time), function(i) {    t1 <- time(sp_pols)[i]    if (i < last(sp_pols@time)) {        t2 <- time(sp_pols)[i + 1]        trange <- paste0(format(t1), "::", format(t2 - 1))    }    else {        t2 <- max(format(last(sp_pols@endTime)), format(last(data_sp@endTime) +             1))        trange <- paste0(format(t1), "::", t2)    }    data_spatial <- subset(data_all_spatial, time >= t1 & time <         t2)    if (nrow(data_spatial) > 0) {        data_spatial$time <- NULL        BAU_spatial <- sp_pols[, i]        BAU_spatial$time <- time(sp_pols)[i]        map_data_to_BAUs(data_spatial, BAU_spatial, average_in_BAU = average_in_BAU)    }    else {        NULL    }})
 9: .local(data_sp, sp_pols, average_in_BAU)
10: map_data_to_BAUs(data[[i]], BAUs, average_in_BAU = average_in_BAU)
11: map_data_to_BAUs(data[[i]], BAUs, average_in_BAU = average_in_BAU)
12: SRE(f = f, data = list(STObj), basis = G, BAUs = grid_BAUs, est_error = FALSE)
13: eval(expr, envir, enclos)
14: eval(expr, envir, enclos)
15: withVisible(eval(expr, envir, enclos))
16: withCallingHandlers(withVisible(eval(expr, envir, enclos)), warning = wHandler,     error = eHandler, message = mHandler)
17: handle(ev <- withCallingHandlers(withVisible(eval(expr, envir,     enclos)), warning = wHandler, error = eHandler, message = mHandler))
18: timing_fn(handle(ev <- withCallingHandlers(withVisible(eval(expr,     envir, enclos)), warning = wHandler, error = eHandler, message = mHandler)))
19: evaluate_call(expr, parsed$src[[i]], envir = envir, enclos = enclos,     debug = debug, last = i == length(out), use_try = stop_on_error !=         2L, keep_warning = keep_warning, keep_message = keep_message,     output_handler = output_handler, include_timing = include_timing)
20: evaluate(code, envir = env, new_device = FALSE, keep_warning = !isFALSE(options$warning),     keep_message = !isFALSE(options$message), stop_on_error = if (options$error &&         options$include) 0L else 2L, output_handler = knit_handlers(options$render,         options))
21: in_dir(input_dir(), evaluate(code, envir = env, new_device = FALSE,     keep_warning = !isFALSE(options$warning), keep_message = !isFALSE(options$message),     stop_on_error = if (options$error && options$include) 0L else 2L,     output_handler = knit_handlers(options$render, options)))
22: block_exec(params)
23: call_block(x)
24: process_group.block(group)
25: process_group(group)
26: withCallingHandlers(if (tangle) process_tangle(group) else process_group(group),     error = function(e) {        setwd(wd)        cat(res, sep = "\n", file = output %n% "")        message("Quitting from lines ", paste(current_lines(i),             collapse = "-"), " (", knit_concord$get("infile"),             ") ")    })
27: process_file(text, output)
28: (if (grepl("\\.[Rr]md$", file)) knit2html_v1 else if (grepl("\\.[Rr]rst$",     file)) knit2pandoc else knit)(file, encoding = encoding,     quiet = quiet, envir = globalenv())
29: engine$weave(file, quiet = quiet, encoding = enc)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch({    engine$weave(file, quiet = quiet, encoding = enc)    setwd(startdir)    find_vignette_product(name, by = "weave", engine = engine)}, error = function(e) {    stop(gettextf("processing vignette '%s' failed with diagnostics:\n%s",         file, conditionMessage(e)), domain = NA, call. = FALSE)})
34: buildVignettes(dir = "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FRK.Rcheck/vign_test/FRK")
An irrecoverable exception occurred. R is aborting now ...
Segmentation fault