Running ‘rsolr_unit_tests.R’ [12m/63m]
Running the tests in ‘tests/rsolr_unit_tests.R’ failed.
Complete output:
  > rsolr:::.test()
  Starting Solr...
  Use options(verbose=TRUE) to diagnose any problems.
  Solr started at: http://localhost:8983/solr/techproducts
  
  Attaching package: 'BiocGenerics'
  
  The following objects are masked from 'package:parallel':
  
      clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
      clusterExport, clusterMap, parApply, parCapply, parLapply,
      parLapplyLB, parRapply, parSapply, parSapplyLB
  
  The following objects are masked from 'package:stats':
  
      IQR, mad, sd, var, xtabs
  
  The following objects are masked from 'package:base':
  
      Filter, Find, Map, Position, Reduce, anyDuplicated, append,
      as.data.frame, cbind, colMeans, colSums, colnames, do.call,
      duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
      lapply, lengths, mapply, match, mget, order, paste, pmax, pmax.int,
      pmin, pmin.int, rank, rbind, rowMeans, rowSums, rownames, sapply,
      setdiff, sort, table, tapply, union, unique, unsplit, which,
      which.max, which.min
  
  
  Attaching package: 'rsolr'
  
  The following object is masked from 'package:stats':
  
      ftable
  
  The following object is masked from 'package:base':
  
      grouping
  
  Starting Solr...
  Use options(verbose=TRUE) to diagnose any problems.
  
   *** caught segfault ***
  address c, cause 'memory not mapped'
  
  Traceback:
   1: grepl("%[[:xdigit:]]{2}", URL, useBytes = TRUE)
   2: FUN(X[[i]], ...)
   3: lapply(i, URLencode)
   4: x[[name]]
   5: x[[name]]
   6: RestUri(uri)$schema
   7: RestUri(uri)$schema
   8: read(RestUri(uri)$schema)
   9: doTryCatch(return(expr), name, parentenv, handler)
  10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
  11: tryCatchList(expr, classes, parentenv, handlers)
  12: tryCatch(expr, error = function(e) {    call <- conditionCall(e)    if (!is.null(call)) {        if (identical(call[[1L]], quote(doTryCatch)))             call <- sys.call(-4L)        dcall <- deparse(call)[1L]        prefix <- paste("Error in", dcall, ": ")        LONG <- 75L        msg <- conditionMessage(e)        sm <- strsplit(msg, "\n")[[1L]]        w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")        if (is.na(w))             w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L],                 type = "b")        if (w > LONG)             prefix <- paste0(prefix, "\n  ")    }    else prefix <- "Error : "    msg <- paste0(prefix, conditionMessage(e), "\n")    .Internal(seterrmessage(msg[1L]))    if (!silent && identical(getOption("show.error.messages"),         TRUE)) {        cat(msg, file = outFile)        .Internal(printDeferredWarnings())    }    invisible(structure(msg, class = "try-error", condition = e))})
  13: try(read(RestUri(uri)$schema), silent = TRUE)
  14: solrIsReady(.self$uri)
  15: solr$start()
  16: TestSolr(schema, restart = TRUE)
  17: func()
  18: system.time(func())
  19: doTryCatch(return(expr), name, parentenv, handler)
  20: tryCatchOne(expr, names, parentenv, handlers[[1L]])
  21: tryCatchList(expr, classes, parentenv, handlers)
  22: tryCatch(expr, error = function(e) {    call <- conditionCall(e)    if (!is.null(call)) {        if (identical(call[[1L]], quote(doTryCatch)))             call <- sys.call(-4L)        dcall <- deparse(call)[1L]        prefix <- paste("Error in", dcall, ": ")        LONG <- 75L        msg <- conditionMessage(e)        sm <- strsplit(msg, "\n")[[1L]]        w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")        if (is.na(w))             w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L],                 type = "b")        if (w > LONG)             prefix <- paste0(prefix, "\n  ")    }    else prefix <- "Error : "    msg <- paste0(prefix, conditionMessage(e), "\n")    .Internal(seterrmessage(msg[1L]))    if (!silent && identical(getOption("show.error.messages"),         TRUE)) {        cat(msg, file = outFile)        .Internal(printDeferredWarnings())    }    invisible(structure(msg, class = "try-error", condition = e))})
  23: try(system.time(func()))
  24: .executeTestCase(funcName, envir = sandbox, setUpFunc = .setUp,     tearDownFunc = .tearDown)
  25: .sourceTestFile(testFile, testSuite$testFuncRegexp)
  26: RUnit::runTestSuite(suite)
  27: get("testPackage", getNamespace("BiocGenerics"))("rsolr")
  28: rsolr:::.test()
  An irrecoverable exception occurred. R is aborting now ...
  cannot make pipe