CDF.rop : <anonymous> : <anonymous>: no visible global function
  definition for 'dmnom'
CDF.rop: no visible global function definition for 'pbinom'
Match.gene : IQR.f: no visible binding for global variable 'IQR'
MetaDE.Read: no visible global function definition for 'read.table'
MetaDE.Read: no visible global function definition for 'read.csv'
MetaDE.filter: no visible global function definition for 'quantile'
MetaDE.impute: no visible global function definition for 'impute.knn'
MetaDE.rawdata: no visible binding for global variable 'data'
cal.logrank : get.stat: no visible global function definition for
  'coxph'
cal.minMCC: no visible global function definition for 'combn'
cal.modt: no visible global function definition for 'median'
cal.p.logrank : get.p: no visible global function definition for
  'coxph'
count.DEnumber : <anonymous>: no visible global function definition for
  'p.adjust'
draw.DEnumber : <anonymous>: no visible global function definition for
  'p.adjust'
draw.DEnumber : get.c: no visible global function definition for 'dist'
draw.DEnumber: no visible global function definition for 'plot'
draw.DEnumber: no visible global function definition for 'points'
draw.DEnumber: no visible global function definition for 'lines'
draw.DEnumber: no visible global function definition for 'legend'
get.AW: no visible global function definition for 'runif'
get.AW: no visible global function definition for 'p.adjust'
get.AW.OC: no visible global function definition for 'runif'
get.AW.OC: no visible global function definition for 'p.adjust'
get.FEM: no visible global function definition for 'pnorm'
get.FEM: no visible global function definition for 'p.adjust'
get.FEM2: no visible global function definition for 'pnorm'
get.FEM2: no visible global function definition for 'p.adjust'
get.PR: no visible global function definition for 'p.adjust'
get.PR: no visible global function definition for 'runif'
get.REM: no visible global function definition for 'pchisq'
get.REM: no visible global function definition for 'pnorm'
get.REM: no visible global function definition for 'p.adjust'
get.REM2: no visible global function definition for 'pchisq'
get.REM2: no visible global function definition for 'pnorm'
get.REM2: no visible global function definition for 'p.adjust'
get.RP: no visible binding for global variable 'na.rm'
get.RP: no visible global function definition for 'NaReplace2'
get.RP: no visible global function definition for 'p.adjust'
get.SR: no visible global function definition for 'p.adjust'
get.SR: no visible global function definition for 'runif'
get.Stouff : <anonymous>: no visible global function definition for
  'qnorm'
get.Stouff: no visible global function definition for 'p.adjust'
get.Stouff : <anonymous>: no visible global function definition for
  'pnorm'
get.Stouff.OC : <anonymous>: no visible global function definition for
  'qnorm'
get.Stouff.OC: no visible global function definition for 'p.adjust'
get.Stouff.OC : <anonymous>: no visible global function definition for
  'pnorm'
get.fisher: no visible global function definition for 'p.adjust'
get.fisher : <anonymous>: no visible global function definition for
  'pchisq'
get.fisher.OC: no visible global function definition for 'runif'
get.fisher.OC: no visible global function definition for 'p.adjust'
get.maxP: no visible global function definition for 'p.adjust'
get.maxP : <anonymous>: no visible global function definition for
  'pbeta'
get.maxP.OC: no visible global function definition for 'p.adjust'
get.minMCC: no visible global function definition for 'p.adjust'
get.minP: no visible global function definition for 'p.adjust'
get.minP : <anonymous>: no visible global function definition for
  'pbeta'
get.minP.OC: no visible global function definition for 'p.adjust'
get.p.F: no visible global function definition for 'pf'
get.p.pairedt: no visible global function definition for 'pt'
get.p.pearsonr: no visible global function definition for 'pt'
get.p.regt: no visible global function definition for 'p.adjust'
get.p.regt: no visible global function definition for 'pt'
get.p.spearmanr: no visible global function definition for 'pt'
get.roP: no visible global function definition for 'p.adjust'
get.roP : <anonymous>: no visible global function definition for
  'pbeta'
get.roP.OC: no visible global function definition for 'p.adjust'
order.genes.AW: no visible global function definition for 'hclust'
order.genes.AW: no visible global function definition for 'dist'
order.genes.simple: no visible global function definition for 'hclust'
order.genes.simple: no visible global function definition for 'dist'
perm.lab: no visible global function definition for 'rbinom'
plot.matrix: no visible global function definition for
  'colorRampPalette'
plot.matrix: no visible global function definition for 'layout'
plot.matrix: no visible global function definition for 'par'
plot.matrix: no visible global function definition for 'image'
plot.matrix: no visible global function definition for 'axis'
plot.matrix: no visible global function definition for 'abline'
Undefined global functions or variables:
  IQR NaReplace2 abline axis colorRampPalette combn coxph data dist
  dmnom hclust image impute.knn layout legend lines median na.rm
  p.adjust par pbeta pbinom pchisq pf plot pnorm points pt qnorm
  quantile rbinom read.csv read.table runif
Consider adding
  importFrom("grDevices", "colorRampPalette")
  importFrom("graphics", "abline", "axis", "image", "layout", "legend",
             "lines", "par", "plot", "points")
  importFrom("stats", "IQR", "dist", "hclust", "median", "p.adjust",
             "pbeta", "pbinom", "pchisq", "pf", "pnorm", "pt", "qnorm",
             "quantile", "rbinom", "runif")
  importFrom("utils", "combn", "data", "read.csv", "read.table")
to your NAMESPACE file.