catt: no visible global function definition for 'prop.trend.test'
maf: no visible global function definition for 'pchisq'
makeHaploviewInputFile: no visible global function definition for
  'write.table'
msr.binomial.haplotype.test.adjusted: no visible global function
  definition for 'glm'
msr.binomial.haplotype.test.adjusted: no visible global function
  definition for 'anova'
msr.binomial.haplotype.test.adjusted: no visible global function
  definition for 'AIC'
msr.binomial.haplotype.test.adjusted: no visible global function
  definition for 'coef'
msr.binomial.haplotype.test.unadjusted: no visible global function
  definition for 'glm'
msr.binomial.haplotype.test.unadjusted: no visible global function
  definition for 'anova'
msr.binomial.haplotype.test.unadjusted: no visible global function
  definition for 'AIC'
msr.binomial.haplotype.test.unadjusted: no visible global function
  definition for 'coef'
msr.families.unadjusted: no visible global function definition for
  'pchisq'
msr.gaussian.haplotype.test.adjusted: no visible global function
  definition for 'glm'
msr.gaussian.haplotype.test.adjusted: no visible global function
  definition for 'anova'
msr.gaussian.haplotype.test.adjusted: no visible global function
  definition for 'AIC'
msr.gaussian.haplotype.test.adjusted: no visible global function
  definition for 'coef'
msr.gaussian.haplotype.test.unadjusted: no visible global function
  definition for 'glm'
msr.gaussian.haplotype.test.unadjusted: no visible global function
  definition for 'anova'
msr.gaussian.haplotype.test.unadjusted: no visible global function
  definition for 'AIC'
msr.gaussian.haplotype.test.unadjusted: no visible global function
  definition for 'coef'
multi.snp.test: no visible global function definition for 'glm'
multi.snp.test: no visible global function definition for 'anova'
multi.snp.test: no visible global function definition for 'coef'
read.data: no visible global function definition for 'read.table'
read.haploview: no visible global function definition for 'read.table'
single.haplotype.test.binomial: no visible global function definition
  for 'AIC'
single.haplotype.test.binomial: no visible global function definition
  for 'coefficients'
single.haplotype.test.binomial: no visible global function definition
  for 'qnorm'
single.haplotype.test.families: no visible global function definition
  for 'pchisq'
single.haplotype.test.gaussian: no visible global function definition
  for 'AIC'
single.haplotype.test.gaussian: no visible global function definition
  for 'coefficients'
single.snp.test.binomial: no visible global function definition for
  'AIC'
single.snp.test.binomial: no visible global function definition for
  'coef'
single.snp.test.binomial: no visible global function definition for
  'qnorm'
single.snp.test.casecohort.prentice: no visible global function
  definition for 'as.formula'
single.snp.test.gaussian: no visible global function definition for
  'AIC'
single.snp.test.gaussian: no visible global function definition for
  'coef'
single.snp.test.gaussian: no visible global function definition for
  'residuals'
Undefined global functions or variables:
  AIC anova as.formula coef coefficients glm pchisq prop.trend.test
  qnorm read.table residuals write.table
Consider adding
  importFrom("stats", "AIC", "anova", "as.formula", "coef",
             "coefficients", "glm", "pchisq", "prop.trend.test", "qnorm",
             "residuals")
  importFrom("utils", "read.table", "write.table")
to your NAMESPACE file.