Rd file 'H.Rd':
  \usage lines wider than 90 characters:
     H(abundances, lev = "alpha", wts = FALSE, q = 1, HCDT = FALSE, gini = FALSE, boot = FALSE, boot.arg = list(s.sizes = NULL, num.iter = 1 ... [TRUNCATED]
  \examples lines wider than 100 characters:
     simesants_freq<-normalize.rows(simesants[,-1])#not a necessary step, but just to show what you would do if your data were in the form o ... [TRUNCATED]

Rd file 'M.homog.Rd':
  \usage lines wider than 90 characters:
     M.homog(abundances, abundances2 = NULL, q = 1, std = FALSE, boot = FALSE, boot.arg = list(s.sizes = NULL, num.iter = 100))

Rd file 'Rel.homog.Rd':
  \usage lines wider than 90 characters:
     Rel.homog(abundances, abundances2 = NULL, wts = FALSE, boot = FALSE, boot.arg = list(s.sizes = NULL, num.iter = 100))

Rd file 'bootstrap.Rd':
  \usage lines wider than 90 characters:
     bootstrap(abundances, s.sizes = NULL, num.iter = 100, func, func.arg = "blank", sim.pop = FALSE, sim.par = FALSE)
  \examples lines wider than 100 characters:
     simesants_freq<-normalize.rows(simesants[,-1])#not a necessary step, but just to show what you would do if your data were in the form o ... [TRUNCATED]

Rd file 'd.Rd':
  \usage lines wider than 90 characters:
     d(abundances, lev = "alpha", wts = FALSE, q = 1, boot = FALSE, boot.arg = list(s.sizes = NULL, num.iter = 100))
  \examples lines wider than 100 characters:
     simesants_freq<-normalize.rows(simesants[,-1])#not a necessary step, but just to show what you would do if your data were in the form o ... [TRUNCATED]

Rd file 'sim.groups.Rd':
  \usage lines wider than 90 characters:
     sim.groups(abundances1, abundances2, q = 1, labels = FALSE, boot = FALSE, boot.arg = list(s.sizes = NULL, num.iter = 100))
  \examples lines wider than 100 characters:
     sim.groups(simesants[1:3,-1],simesants[4:5,-1],labels=TRUE,boot=TRUE,boot.arg=list(num.iter=200))#gives standard errors only

Rd file 'sim.table.Rd':
  \usage lines wider than 90 characters:
     sim.table(abundances, q = 1, labels = FALSE, half = TRUE, diag = TRUE, boot = FALSE, boot.arg = list(s.sizes = NULL, num.iter = 100))

Rd file 'similarity.Rd':
  \usage lines wider than 90 characters:
     similarity(abundances, abundances2 = NULL, q = 1, boot = FALSE, boot.arg = list(s.sizes = NULL, num.iter = 100))

Rd file 'turnover.Rd':
  \usage lines wider than 90 characters:
     turnover(abundances, abundances2 = NULL, q = 1, boot = FALSE, boot.arg = list(s.sizes = NULL, num.iter = 100))

These lines will be truncated in the PDF manual.